AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012250.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012250.01.T01 MTR_3g019370 97.595 291 7 0 1 291 1 291 0.0 587
MsG0380012250.01.T01 MTR_8g023820 33.219 292 142 7 50 291 66 354 4.29e-41 145
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012250.01.T01 AT1G63780 73.630 292 76 1 1 291 1 292 1.39e-164 459
MsG0380012250.01.T01 AT4G01560 34.437 302 162 9 14 291 54 343 1.19e-41 147

Find 73 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGGTCCTACTGCATATTT+TGG 0.152617 3:+13316413 MsG0380012250.01.T01:CDS
TAGAAGAAAAGCTGAAATTT+TGG 0.216351 3:+13319172 MsG0380012250.01.T01:three_prime_UTR
TCCTTCAATTCTACAGATTT+AGG 0.221306 3:-13318351 None:intergenic
CATTCTAAAACATCTGTTTC+CGG 0.297484 3:+13318111 MsG0380012250.01.T01:CDS
ACAACACAAACAAGAGAAAA+TGG 0.315626 3:+13319222 MsG0380012250.01.T01:three_prime_UTR
CGATTCATTCTTTCAGCATT+GGG 0.364675 3:-13315289 None:intergenic
TCATCATCAATGTGTGATCT+TGG 0.367314 3:-13315038 None:intergenic
AATAATATGCGGATAAGCTT+CGG 0.371784 3:-13316565 None:intergenic
GAGGAACTTTCTGTGATTGA+TGG 0.376034 3:+13319098 MsG0380012250.01.T01:exon
GAAAGAGTTGTGTTTCTGTT+TGG 0.383287 3:-13312699 None:intergenic
TCTGTAGAATTGAAGGAAAT+TGG 0.387754 3:+13318357 MsG0380012250.01.T01:CDS
ATAGTTTGTCATCTACCATA+TGG 0.392644 3:+13316395 MsG0380012250.01.T01:CDS
TGACTATACAGATGTTATCT+TGG 0.414988 3:+13316340 MsG0380012250.01.T01:CDS
CGAGATATAGTCAGACTTGT+TGG 0.426562 3:-13318170 None:intergenic
AGTCTGACTATATCTCGTTC+AGG 0.430003 3:+13318176 MsG0380012250.01.T01:CDS
ATAATATGCGGATAAGCTTC+GGG 0.448452 3:-13316564 None:intergenic
AGAAGGTGCAGCGACGAAGA+AGG 0.453390 3:-13312726 None:intergenic
TCCTAAATCTGTAGAATTGA+AGG 0.458118 3:+13318350 MsG0380012250.01.T01:CDS
AACTGTTTGAGTGGAGCGCT+TGG 0.459070 3:-13315116 None:intergenic
GAGTGGAGCGCTTGGATCCC+TGG 0.464338 3:-13315108 None:intergenic
ACGATTCATTCTTTCAGCAT+TGG 0.464351 3:-13315290 None:intergenic
TGACAAACTATTAAACCATC+TGG 0.466080 3:-13316383 None:intergenic
GTTGTTCCTTGCAGGTTACA+AGG 0.469398 3:+13316505 MsG0380012250.01.T01:intron
AAATATGCAGTAGGACCATA+TGG 0.471997 3:-13316410 None:intergenic
CATCATCAATGTGTGATCTT+GGG 0.478264 3:-13315037 None:intergenic
GAAGGTGCAGCGACGAAGAA+GGG 0.480189 3:-13312725 None:intergenic
AAATTCTGCTGACCACATCC+AGG 0.485156 3:+13315090 MsG0380012250.01.T01:CDS
GAAACGAGGAGGCGGCGCTT+CGG 0.487003 3:+13313069 MsG0380012250.01.T01:CDS
TTCCGTGTAGTGTTCATGTA+AGG 0.489124 3:-13319075 None:intergenic
TCCACTCAAACAGTTTGTAA+AGG 0.502089 3:+13315124 MsG0380012250.01.T01:CDS
ACCTTTACAAACTGTTTGAG+TGG 0.503052 3:-13315125 None:intergenic
AAAGTTAGAGAAGCTCTTCG+AGG 0.508327 3:+13312918 MsG0380012250.01.T01:CDS
AAGAATGAATCGTGGTGGTC+AGG 0.523960 3:+13315300 MsG0380012250.01.T01:CDS
AGCTTCGGGCATGGTTCCAA+CGG 0.525645 3:-13316550 None:intergenic
CTGTGATTAAGGTGGTTAGA+TGG 0.528373 3:-13312792 None:intergenic
GCAGATAAAATTAGGAACAG+TGG 0.540090 3:+13319017 MsG0380012250.01.T01:intron
CTCGAAGATGAAAACACAGC+TGG 0.551404 3:+13313104 MsG0380012250.01.T01:CDS
GCATCATATATATGAAAAGC+AGG 0.552365 3:+13318323 MsG0380012250.01.T01:CDS
GCAACGGCTGACGTCGGAGA+AGG 0.555796 3:-13312743 None:intergenic
ACATGAACACTACACGGAAG+AGG 0.568800 3:+13319079 MsG0380012250.01.T01:CDS
GCTGTAAACAGTTAGGTGAA+AGG 0.571363 3:+13318080 MsG0380012250.01.T01:intron
GATACTCTCTTCGCAAACGT+TGG 0.576621 3:-13312842 None:intergenic
TGTTACTGTGCTGTTAGTGC+AGG 0.580733 3:+13319139 MsG0380012250.01.T01:three_prime_UTR
AGCGCTTGGATCCCTGGATG+TGG 0.588133 3:-13315102 None:intergenic
AGTAATCCAAAATATGCAGT+AGG 0.590553 3:-13316419 None:intergenic
GTCAGCCGTTGCACTCCCGC+CGG 0.593977 3:+13312754 MsG0380012250.01.T01:five_prime_UTR
GTACACCGGCGGGAGTGCAA+CGG 0.594857 3:-13312759 None:intergenic
TTGAGACACTAAACTCAGCA+AGG 0.597537 3:+13319329 MsG0380012250.01.T01:three_prime_UTR
GAACTTTCTGTGATTGATGG+AGG 0.597778 3:+13319101 MsG0380012250.01.T01:exon
TGAGCTGAGAAACGAGGAGG+CGG 0.602219 3:+13313061 MsG0380012250.01.T01:CDS
ATTAGAGACAGAAAAGCCGT+TGG 0.603528 3:+13316534 MsG0380012250.01.T01:CDS
CATCTGTATAGTCATGTGAT+CGG 0.609305 3:-13316331 None:intergenic
TGAAGAAACTGTACACCGGC+GGG 0.611036 3:-13312769 None:intergenic
TCCTCGTTTCTCAGCTCAGT+AGG 0.612163 3:-13313056 None:intergenic
TTGAACAACTGTGATTAAGG+TGG 0.618103 3:-13312800 None:intergenic
AATTCTGCTGACCACATCCA+GGG 0.624410 3:+13315091 MsG0380012250.01.T01:CDS
CATATATATGAAAAGCAGGC+GGG 0.633112 3:+13318327 MsG0380012250.01.T01:CDS
ATGCGGATAAGCTTCGGGCA+TGG 0.635152 3:-13316559 None:intergenic
GAACACCGAGGTGTGCCAGA+TGG 0.638084 3:+13316368 MsG0380012250.01.T01:CDS
GGGAGTGCAACGGCTGACGT+CGG 0.638101 3:-13312749 None:intergenic
GACCTTACATGAACACTACA+CGG 0.644746 3:+13319073 MsG0380012250.01.T01:CDS
TCATATATATGAAAAGCAGG+CGG 0.651248 3:+13318326 MsG0380012250.01.T01:CDS
ACCTACTGAGCTGAGAAACG+AGG 0.674435 3:+13313055 MsG0380012250.01.T01:CDS
GTGAAGAAACTGTACACCGG+CGG 0.676923 3:-13312770 None:intergenic
TGAGACACTAAACTCAGCAA+GGG 0.685905 3:+13319330 MsG0380012250.01.T01:three_prime_UTR
TTAAACCATCTGGCACACCT+CGG 0.692377 3:-13316373 None:intergenic
TATAGACGCAACTCAAAACG+TGG 0.698081 3:-13318381 None:intergenic
AAATTATCAAGAATAATATG+CGG 0.698309 3:-13316576 None:intergenic
TACTGAGCTGAGAAACGAGG+AGG 0.706049 3:+13313058 MsG0380012250.01.T01:CDS
ATGGTGAAGAAACTGTACAC+CGG 0.733503 3:-13312773 None:intergenic
GCTGAAAGAATGAATCGTGG+TGG 0.764437 3:+13315295 MsG0380012250.01.T01:CDS
AATGCTGAAAGAATGAATCG+TGG 0.776928 3:+13315292 MsG0380012250.01.T01:CDS
ATCTTGGTTCATGAACACCG+AGG 0.787086 3:+13316356 MsG0380012250.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAACATTAATAAATC+AGG - Chr3:13315972-13315991 None:intergenic 10.0%
!! TTAAAAACATTAATAAATCA+GGG - Chr3:13315971-13315990 None:intergenic 10.0%
!! TTTATAGTATTATTTAAGAA+AGG + Chr3:13314609-13314628 MsG0380012250.01.T01:intron 10.0%
!!! AATATCATCATTATTTTTTT+AGG - Chr3:13316271-13316290 None:intergenic 10.0%
!!! GTTTATTTATTTTTTGAATT+GGG + Chr3:13313518-13313537 MsG0380012250.01.T01:intron 10.0%
!!! TGTTTATTTATTTTTTGAAT+TGG + Chr3:13313517-13313536 MsG0380012250.01.T01:intron 10.0%
!!! TGTTTTTTTTTTTTTTTTGA+AGG - Chr3:13319457-13319476 None:intergenic 10.0%
!! AAATTATCAAGAATAATATG+CGG - Chr3:13316579-13316598 None:intergenic 15.0%
!! AATATGGAAAATTGATTATT+TGG + Chr3:13315374-13315393 MsG0380012250.01.T01:intron 15.0%
!! ACAAGAAAATATTGAATTAT+TGG - Chr3:13318622-13318641 None:intergenic 15.0%
!! AGTATTATAATTGATATAGA+TGG - Chr3:13317787-13317806 None:intergenic 15.0%
!! ATAAATAATAATTGCATGAA+AGG + Chr3:13314412-13314431 MsG0380012250.01.T01:intron 15.0%
!! GGCATATAATTAAAAAAATA+TGG - Chr3:13317442-13317461 None:intergenic 15.0%
!! TAATATTAGATAATATGCTT+GGG + Chr3:13315590-13315609 MsG0380012250.01.T01:intron 15.0%
!! TATGTATAACTAAAAGATAA+AGG + Chr3:13313626-13313645 MsG0380012250.01.T01:intron 15.0%
!! TATGTGAAGTATAAAATATT+TGG - Chr3:13315181-13315200 None:intergenic 15.0%
!! TTAATATTAGATAATATGCT+TGG + Chr3:13315589-13315608 MsG0380012250.01.T01:intron 15.0%
!!! AAATAATTTATTTGCTATTG+TGG + Chr3:13316046-13316065 MsG0380012250.01.T01:intron 15.0%
!!! ATAGCAAATAAATTATTTTG+AGG - Chr3:13316044-13316063 None:intergenic 15.0%
!!! GCTTTTATGTTAATTTATAA+TGG - Chr3:13313292-13313311 None:intergenic 15.0%
!!! TCATTGTTTTATTTATATTG+AGG - Chr3:13317319-13317338 None:intergenic 15.0%
!!! TGAGTAAATTTTGTAAATAA+TGG + Chr3:13313162-13313181 MsG0380012250.01.T01:intron 15.0%
!! AAATGTAATGTGTAAAATGT+TGG - Chr3:13315698-13315717 None:intergenic 20.0%
!! AACATTAGAAATACTTCATT+TGG + Chr3:13316866-13316885 MsG0380012250.01.T01:intron 20.0%
!! AATATTAGATAATATGCTTG+GGG + Chr3:13315591-13315610 MsG0380012250.01.T01:intron 20.0%
!! ACAAAAACTATATAGAGATA+TGG - Chr3:13315784-13315803 None:intergenic 20.0%
!! ACCAGAAAATATTGAATTAT+TGG - Chr3:13318566-13318585 None:intergenic 20.0%
!! ATCAAAATATAGAATGATTG+TGG + Chr3:13316744-13316763 MsG0380012250.01.T01:intron 20.0%
!! ATGGTTAATATTAATAACAC+AGG - Chr3:13317423-13317442 None:intergenic 20.0%
!! CTAATCAACTCTTATTATTA+GGG - Chr3:13317227-13317246 None:intergenic 20.0%
!! CTTAATCTTATTATGTAAGT+CGG - Chr3:13317111-13317130 None:intergenic 20.0%
!! GCAATTATTATTTATTTCAG+TGG - Chr3:13314407-13314426 None:intergenic 20.0%
!! GGAATTATAGTTATTTACTT+CGG + Chr3:13314840-13314859 MsG0380012250.01.T01:intron 20.0%
!! TAAGTAAAATTAAACGATGT+AGG + Chr3:13316810-13316829 MsG0380012250.01.T01:intron 20.0%
!! TAATCAACTCTTATTATTAG+GGG - Chr3:13317226-13317245 None:intergenic 20.0%
!! TAATTGCTAAAAAAAACTCA+TGG - Chr3:13314182-13314201 None:intergenic 20.0%
!! TATATTGAGGTTATATTCAA+TGG - Chr3:13317306-13317325 None:intergenic 20.0%
!! TATTACTATTTAAACCACAT+TGG + Chr3:13314200-13314219 MsG0380012250.01.T01:intron 20.0%
!! TATTAGTATATTAACTTCAC+AGG - Chr3:13315558-13315577 None:intergenic 20.0%
!! TCATAAAAACCAAATTTCAA+AGG - Chr3:13314903-13314922 None:intergenic 20.0%
!! TCTAATCAACTCTTATTATT+AGG - Chr3:13317228-13317247 None:intergenic 20.0%
!! TTCAAGAGAATATCTATTAT+TGG - Chr3:13318661-13318680 None:intergenic 20.0%
!!! AATATCTTGAATTTTATGAG+TGG + Chr3:13314783-13314802 MsG0380012250.01.T01:intron 20.0%
!!! AATTTTGTTGTTTTTGTAGA+GGG + Chr3:13313023-13313042 MsG0380012250.01.T01:intron 20.0%
!!! ACCAATAATTCAATATTTTC+TGG + Chr3:13318562-13318581 MsG0380012250.01.T01:intron 20.0%
!!! ATATATTCCATATGTTTTTG+TGG + Chr3:13317589-13317608 MsG0380012250.01.T01:intron 20.0%
!!! ATTTGGATTTTCAATTCTTT+TGG - Chr3:13315455-13315474 None:intergenic 20.0%
!!! CAATGCAAAAATATTTTCAA+GGG - Chr3:13315889-13315908 None:intergenic 20.0%
!!! CTTTTTTGCATTATTGTTAA+TGG + Chr3:13314147-13314166 MsG0380012250.01.T01:intron 20.0%
!!! TAATTTTGTTGTTTTTGTAG+AGG + Chr3:13313022-13313041 MsG0380012250.01.T01:intron 20.0%
!!! TATATTCCATATGTTTTTGT+GGG + Chr3:13317590-13317609 MsG0380012250.01.T01:intron 20.0%
!!! TCTTCATTTTTTTTTTGTGT+AGG + Chr3:13315249-13315268 MsG0380012250.01.T01:intron 20.0%
!!! TCTTGATAATTTTGAAACTA+AGG + Chr3:13316587-13316606 MsG0380012250.01.T01:CDS 20.0%
!!! TTAATTTTCACACTGTTATT+TGG + Chr3:13315987-13316006 MsG0380012250.01.T01:intron 20.0%
!!! TTATGTAGAAAGTACAATAA+TGG - Chr3:13315746-13315765 None:intergenic 20.0%
!!! TTGTAAATAATGGTTCTATT+TGG + Chr3:13313172-13313191 MsG0380012250.01.T01:intron 20.0%
!!! TTTATTTTTTGAATTGGGAA+AGG + Chr3:13313523-13313542 MsG0380012250.01.T01:intron 20.0%
!!! TTTGTACATACTAATTTTAC+TGG + Chr3:13316640-13316659 MsG0380012250.01.T01:intron 20.0%
! AAAGATGAAATGAAGTAAAG+TGG + Chr3:13313735-13313754 MsG0380012250.01.T01:intron 25.0%
! AAGCACTTATTAAATGTAGT+TGG - Chr3:13317733-13317752 None:intergenic 25.0%
! AATGTAGTTGGGAAATAAAA+AGG - Chr3:13317721-13317740 None:intergenic 25.0%
! AATTGATATAGATGGTGATT+AGG - Chr3:13317779-13317798 None:intergenic 25.0%
! AGCACTTATTAAATGTAGTT+GGG - Chr3:13317732-13317751 None:intergenic 25.0%
! GCACATATAGAAAATGATAA+CGG - Chr3:13315350-13315369 None:intergenic 25.0%
! GCATGTTATATCATATATAC+TGG + Chr3:13315908-13315927 MsG0380012250.01.T01:intron 25.0%
! GCTTAAACCAAAAAAAATGT+TGG - Chr3:13316155-13316174 None:intergenic 25.0%
! TAAAATAAGCCTAATCCAAA+CGG - Chr3:13313207-13313226 None:intergenic 25.0%
! TATAACGCTGATGAATAAAT+TGG + Chr3:13314750-13314769 MsG0380012250.01.T01:intron 25.0%
! TATAGCATATAAGCAGTTTA+TGG + Chr3:13318774-13318793 MsG0380012250.01.T01:intron 25.0%
! TATCACATAATGCTAACTAA+AGG - Chr3:13313602-13313621 None:intergenic 25.0%
! TCAGTACTTCAATCATAATT+TGG - Chr3:13317028-13317047 None:intergenic 25.0%
! TGAAATAACCTGAAATGAAA+GGG - Chr3:13316294-13316313 None:intergenic 25.0%
! TTATGTCAGTTAAGAATCAT+GGG + Chr3:13314507-13314526 MsG0380012250.01.T01:intron 25.0%
! TTCTATATGTGCTTGTAATA+TGG + Chr3:13315358-13315377 MsG0380012250.01.T01:intron 25.0%
! TTGTGATTATTGATCATGTT+TGG + Chr3:13313436-13313455 MsG0380012250.01.T01:intron 25.0%
! TTTATGTCAGTTAAGAATCA+TGG + Chr3:13314506-13314525 MsG0380012250.01.T01:intron 25.0%
!! AAAAAGTTGATTATCCAAAC+AGG - Chr3:13313653-13313672 None:intergenic 25.0%
!! AACCATTTTGTATCAACTTT+AGG + Chr3:13318719-13318738 MsG0380012250.01.T01:intron 25.0%
!! AACCTTTTGCAGATAAAATT+AGG + Chr3:13319009-13319028 MsG0380012250.01.T01:intron 25.0%
!! AACTATTACTGATTAGTTAG+AGG - Chr3:13316225-13316244 None:intergenic 25.0%
!! CTGCTCATAAAATTTCTTTT+TGG + Chr3:13318058-13318077 MsG0380012250.01.T01:intron 25.0%
!! GCAATGCAAAAATATTTTCA+AGG - Chr3:13315890-13315909 None:intergenic 25.0%
!! GTGTTAACTCTATAGATTTT+AGG + Chr3:13316465-13316484 MsG0380012250.01.T01:intron 25.0%
!! TAGAAGAAAAGCTGAAATTT+TGG + Chr3:13319172-13319191 MsG0380012250.01.T01:three_prime_UTR 25.0%
!! TTCAACTTTAGGAATAAGAT+TGG - Chr3:13318976-13318995 None:intergenic 25.0%
!! TTCCTAATTTTATCTGCAAA+AGG - Chr3:13319014-13319033 None:intergenic 25.0%
!! TTTTTGAACAACTGTGATTA+AGG - Chr3:13312806-13312825 None:intergenic 25.0%
!!! AAACAGATGTTTTAGAATGT+TGG - Chr3:13318110-13318129 None:intergenic 25.0%
!!! AACCTAAAGTTGATACAAAA+TGG - Chr3:13318724-13318743 None:intergenic 25.0%
!!! AGAGCACTTTTATCAATTTT+TGG + Chr3:13314819-13314838 MsG0380012250.01.T01:intron 25.0%
!!! AGTTTTTGGTATTCAACTTT+AGG - Chr3:13318987-13319006 None:intergenic 25.0%
!!! ATATTTTGGATTACTCAATG+TGG + Chr3:13316427-13316446 MsG0380012250.01.T01:CDS 25.0%
!!! ATTTTGTTGTTTTTGTAGAG+GGG + Chr3:13313024-13313043 MsG0380012250.01.T01:intron 25.0%
!!! CAGAAAGGTAATTATTTTTG+CGG - Chr3:13317878-13317897 None:intergenic 25.0%
!!! TCAACTTTTTTGTAGCTTAT+AGG + Chr3:13313663-13313682 MsG0380012250.01.T01:intron 25.0%
!!! TGTTTTAAAATGTTAGTGTG+TGG + Chr3:13314115-13314134 MsG0380012250.01.T01:intron 25.0%
!!! TGTTTTGAATACTGCAAAAA+AGG - Chr3:13316777-13316796 None:intergenic 25.0%
AAAATAAGCCTAATCCAAAC+GGG - Chr3:13313206-13313225 None:intergenic 30.0%
AAACATAAAAGCTTATAGCG+TGG + Chr3:13313348-13313367 MsG0380012250.01.T01:intron 30.0%
AACCAAAAAAAATGTTGGAC+AGG - Chr3:13316150-13316169 None:intergenic 30.0%
AATAATATGCGGATAAGCTT+CGG - Chr3:13316568-13316587 None:intergenic 30.0%
ACAACACAAACAAGAGAAAA+TGG + Chr3:13319222-13319241 MsG0380012250.01.T01:three_prime_UTR 30.0%
ACTATTTAAACCACATTGGT+TGG + Chr3:13314204-13314223 MsG0380012250.01.T01:intron 30.0%
ACTGTAAACAGTTATGTGAA+AGG + Chr3:13317954-13317973 MsG0380012250.01.T01:intron 30.0%
AGGTCAATTTGGAAAAGATT+AGG + Chr3:13317515-13317534 MsG0380012250.01.T01:intron 30.0%
AGTAATCCAAAATATGCAGT+AGG - Chr3:13316422-13316441 None:intergenic 30.0%
ATGATATTCCCTTTCATTTC+AGG + Chr3:13316283-13316302 MsG0380012250.01.T01:intron 30.0%
ATTTAACTGTGTCTCTCATA+TGG + Chr3:13314965-13314984 MsG0380012250.01.T01:intron 30.0%
CAACTTATGACATTGTTCAT+AGG - Chr3:13313818-13313837 None:intergenic 30.0%
CTATACAGAAAAAGCTTAGA+AGG + Chr3:13312864-13312883 MsG0380012250.01.T01:CDS 30.0%
CTGAAATAACCTGAAATGAA+AGG - Chr3:13316295-13316314 None:intergenic 30.0%
CTGTTAACTTTCTCTTGTTA+CGG + Chr3:13318258-13318277 MsG0380012250.01.T01:intron 30.0%
CTTATGCAAATAAGCTTGTA+TGG + Chr3:13313229-13313248 MsG0380012250.01.T01:intron 30.0%
GAAATACTTCATTTGGAGAA+TGG + Chr3:13316873-13316892 MsG0380012250.01.T01:intron 30.0%
GATAAGCACTTATCATGATA+AGG - Chr3:13313378-13313397 None:intergenic 30.0%
GCATCATATATATGAAAAGC+AGG + Chr3:13318323-13318342 MsG0380012250.01.T01:CDS 30.0%
GCTAGTAGTTAAGCTTAAAT+AGG + Chr3:13314033-13314052 MsG0380012250.01.T01:intron 30.0%
GTATCACTAGTATTACAGAA+AGG - Chr3:13317893-13317912 None:intergenic 30.0%
GTTATATTGCTCCAATTACA+AGG - Chr3:13314736-13314755 None:intergenic 30.0%
TAAAAGATAAAGGTCCTGTT+TGG + Chr3:13313636-13313655 MsG0380012250.01.T01:intron 30.0%
TAAGCTCAGTAGAATGATTA+AGG + Chr3:13317254-13317273 MsG0380012250.01.T01:intron 30.0%
TATAATTGATATCCGACCTT+AGG + Chr3:13317495-13317514 MsG0380012250.01.T01:intron 30.0%
TCAATTAAGCCAATGCAAAT+AGG + Chr3:13313890-13313909 MsG0380012250.01.T01:intron 30.0%
TCAGTTAAGGTTGAATTGAT+CGG + Chr3:13314252-13314271 MsG0380012250.01.T01:intron 30.0%
TCATATATATGAAAAGCAGG+CGG + Chr3:13318326-13318345 MsG0380012250.01.T01:CDS 30.0%
TCCTAAATCTGTAGAATTGA+AGG + Chr3:13318350-13318369 MsG0380012250.01.T01:CDS 30.0%
TCCTTCAATTCTACAGATTT+AGG - Chr3:13318354-13318373 None:intergenic 30.0%
TCTGTAGAATTGAAGGAAAT+TGG + Chr3:13318357-13318376 MsG0380012250.01.T01:CDS 30.0%
TCTTGGAGAACTTATGAAAA+CGG + Chr3:13313792-13313811 MsG0380012250.01.T01:intron 30.0%
TGACAAACTATTAAACCATC+TGG - Chr3:13316386-13316405 None:intergenic 30.0%
TGACTATACAGATGTTATCT+TGG + Chr3:13316340-13316359 MsG0380012250.01.T01:CDS 30.0%
TGTTGCGTTAGCAAAAATAT+GGG + Chr3:13315484-13315503 MsG0380012250.01.T01:intron 30.0%
TTCAATCATAATTTGGACCA+GGG - Chr3:13317021-13317040 None:intergenic 30.0%
TTTAACTGTGTCTCTCATAT+GGG + Chr3:13314966-13314985 MsG0380012250.01.T01:intron 30.0%
TTTCAATGTGAACATATGCT+TGG - Chr3:13317635-13317654 None:intergenic 30.0%
TTTCTTCCCACAAAAACATA+TGG - Chr3:13317599-13317618 None:intergenic 30.0%
! AAGCAGTGTTACTATTGTTA+TGG - Chr3:13318022-13318041 None:intergenic 30.0%
! ACGCTATAAGCTTTTATGTT+TGG - Chr3:13313349-13313368 None:intergenic 30.0%
! ACTCAAAAAAGCCTTGTAAT+TGG + Chr3:13314722-13314741 MsG0380012250.01.T01:intron 30.0%
! AGTACAATAATGGAACATAG+TGG - Chr3:13315736-13315755 None:intergenic 30.0%
! AGTGTTACTATTGTTATGGA+TGG - Chr3:13318018-13318037 None:intergenic 30.0%
! ATAGTTTGTCATCTACCATA+TGG + Chr3:13316395-13316414 MsG0380012250.01.T01:CDS 30.0%
! ATCTTTTCCAAATTGACCTA+AGG - Chr3:13317514-13317533 None:intergenic 30.0%
! CATACTAATTTTACTGGCAA+TGG + Chr3:13316646-13316665 MsG0380012250.01.T01:intron 30.0%
! CTATTTAAACCACATTGGTT+GGG + Chr3:13314205-13314224 MsG0380012250.01.T01:intron 30.0%
! GAACAAAATTGTTCTAGCTA+TGG - Chr3:13314295-13314314 None:intergenic 30.0%
! TGGCATTCCAAATCTATTTT+AGG - Chr3:13314867-13314886 None:intergenic 30.0%
! TGGCTTATTTAGAGTTTCTA+TGG + Chr3:13315928-13315947 MsG0380012250.01.T01:intron 30.0%
! TTTTGGACTTTCAGTATCAT+TGG + Chr3:13316710-13316729 MsG0380012250.01.T01:intron 30.0%
!! AATGATAACGGAGGATAAAA+TGG - Chr3:13315338-13315357 None:intergenic 30.0%
!! CATATAGAAAATGATAACGG+AGG - Chr3:13315347-13315366 None:intergenic 30.0%
!! CATTCTAAAACATCTGTTTC+CGG + Chr3:13318111-13318130 MsG0380012250.01.T01:CDS 30.0%
!! CTTTGTTGTTAGCAATTGTA+TGG + Chr3:13318438-13318457 MsG0380012250.01.T01:intron 30.0%
!! GAAAAGCTGAAATTTTGGAA+TGG + Chr3:13319177-13319196 MsG0380012250.01.T01:three_prime_UTR 30.0%
!! TCAGGTTAGTTTCATTTATC+TGG + Chr3:13318194-13318213 MsG0380012250.01.T01:intron 30.0%
!!! AAATTTTTTGAAATCGACGC+AGG + Chr3:13318915-13318934 MsG0380012250.01.T01:intron 30.0%
!!! AATGTTTTAGCCAAATGCTA+TGG - Chr3:13316852-13316871 None:intergenic 30.0%
!!! ACTTTTGAGCCTTTGAAATT+TGG + Chr3:13314891-13314910 MsG0380012250.01.T01:intron 30.0%
!!! ATTATTTTGAGGCATACATG+AGG - Chr3:13316033-13316052 None:intergenic 30.0%
!!! CAGAATTTTAGGATCTTTCT+CGG - Chr3:13315078-13315097 None:intergenic 30.0%
!!! GCTTTTTTCATAAGCTTTCT+TGG + Chr3:13313775-13313794 MsG0380012250.01.T01:intron 30.0%
AAATATGCAGTAGGACCATA+TGG - Chr3:13316413-13316432 None:intergenic 35.0%
AACGGAGGATAAAATGGTAA+AGG - Chr3:13315332-13315351 None:intergenic 35.0%
AAGAAACAGATCAATCATGC+AGG - Chr3:13316918-13316937 None:intergenic 35.0%
AAGCTGTTTACAGTCCAAAT+TGG - Chr3:13317819-13317838 None:intergenic 35.0%
AATGACCTTCAGTTCAGTTA+AGG + Chr3:13314239-13314258 MsG0380012250.01.T01:intron 35.0%
AATGCTGAAAGAATGAATCG+TGG + Chr3:13315292-13315311 MsG0380012250.01.T01:CDS 35.0%
AATTATATGCCGTGTACTCA+TGG + Chr3:13317451-13317470 MsG0380012250.01.T01:intron 35.0%
AATTTGGACTGTAAACAGCT+TGG + Chr3:13317818-13317837 MsG0380012250.01.T01:intron 35.0%
ACAAGTCTAGCAATCAATCA+TGG + Chr3:13316979-13316998 MsG0380012250.01.T01:intron 35.0%
ACCTTTACAAACTGTTTGAG+TGG - Chr3:13315128-13315147 None:intergenic 35.0%
ACGATTCATTCTTTCAGCAT+TGG - Chr3:13315293-13315312 None:intergenic 35.0%
ACGCAACAGCAGTAAATATT+TGG - Chr3:13315472-13315491 None:intergenic 35.0%
AGAAAGGTGACATTTCATTC+AGG + Chr3:13314625-13314644 MsG0380012250.01.T01:intron 35.0%
AGCATCTAATGAGGAAAAGA+TGG + Chr3:13317153-13317172 MsG0380012250.01.T01:intron 35.0%
ATAAATAGCCCGTTTGGATT+AGG + Chr3:13313195-13313214 MsG0380012250.01.T01:intron 35.0%
ATAATATGCGGATAAGCTTC+GGG - Chr3:13316567-13316586 None:intergenic 35.0%
ATATTGTATCTGCTGCATAC+AGG + Chr3:13318301-13318320 MsG0380012250.01.T01:intron 35.0%
ATGTATTTACAGCTTCTCGA+AGG + Chr3:13314570-13314589 MsG0380012250.01.T01:intron 35.0%
ATTATATGCCGTGTACTCAT+GGG + Chr3:13317452-13317471 MsG0380012250.01.T01:intron 35.0%
ATTTGGATAAATAGCCCGTT+TGG + Chr3:13313189-13313208 MsG0380012250.01.T01:intron 35.0%
CAGTTAAGGTTGAATTGATC+GGG + Chr3:13314253-13314272 MsG0380012250.01.T01:intron 35.0%
CATAACATCCTCTTTGAATC+AGG + Chr3:13315532-13315551 MsG0380012250.01.T01:intron 35.0%
CATATATATGAAAAGCAGGC+GGG + Chr3:13318327-13318346 MsG0380012250.01.T01:CDS 35.0%
CATCATCAATGTGTGATCTT+GGG - Chr3:13315040-13315059 None:intergenic 35.0%
CATCTGTATAGTCATGTGAT+CGG - Chr3:13316334-13316353 None:intergenic 35.0%
CCTCGAAGACAATTGTAAAA+TGG + Chr3:13314372-13314391 MsG0380012250.01.T01:intron 35.0%
CGATTCATTCTTTCAGCATT+GGG - Chr3:13315292-13315311 None:intergenic 35.0%
CTGTTGCGTTAGCAAAAATA+TGG + Chr3:13315483-13315502 MsG0380012250.01.T01:intron 35.0%
CTTATTATTAGGGGCTTCTA+GGG - Chr3:13317217-13317236 None:intergenic 35.0%
CTTCAATCATAATTTGGACC+AGG - Chr3:13317022-13317041 None:intergenic 35.0%
CTTCGGACCTAAAATAGATT+TGG + Chr3:13314857-13314876 MsG0380012250.01.T01:intron 35.0%
GAAACTACTGAAACTCATTG+AGG + Chr3:13313569-13313588 MsG0380012250.01.T01:intron 35.0%
GAATATATTGTGCTGCAACT+GGG + Chr3:13318516-13318535 MsG0380012250.01.T01:intron 35.0%
GCAGATAAAATTAGGAACAG+TGG + Chr3:13319017-13319036 MsG0380012250.01.T01:intron 35.0%
TATTTCTTGCGTCTCTAACT+TGG + Chr3:13318687-13318706 MsG0380012250.01.T01:intron 35.0%
TCATCATCAATGTGTGATCT+TGG - Chr3:13315041-13315060 None:intergenic 35.0%
TCCACTCAAACAGTTTGTAA+AGG + Chr3:13315124-13315143 MsG0380012250.01.T01:CDS 35.0%
TCGAGAAGCTGTAAATACAT+TGG - Chr3:13314570-13314589 None:intergenic 35.0%
TCTTATTATTAGGGGCTTCT+AGG - Chr3:13317218-13317237 None:intergenic 35.0%
TGAATATATTGTGCTGCAAC+TGG + Chr3:13318515-13318534 MsG0380012250.01.T01:intron 35.0%
TGTTGTTAGCAATTGTATGG+AGG + Chr3:13318441-13318460 MsG0380012250.01.T01:intron 35.0%
TTAACTGTGTCTCTCATATG+GGG + Chr3:13314967-13314986 MsG0380012250.01.T01:intron 35.0%
TTCAACCTTAACTGAACTGA+AGG - Chr3:13314247-13314266 None:intergenic 35.0%
TTGAACAACTGTGATTAAGG+TGG - Chr3:13312803-13312822 None:intergenic 35.0%
TTGTGTCTCTTGTAGTTACA+TGG - Chr3:13314343-13314362 None:intergenic 35.0%
TTTCCAAATTGACCTAAGGT+CGG - Chr3:13317510-13317529 None:intergenic 35.0%
! AATAATGGAACATAGTGGTC+TGG - Chr3:13315731-13315750 None:intergenic 35.0%
! ATAATGGAACATAGTGGTCT+GGG - Chr3:13315730-13315749 None:intergenic 35.0%
! ATTTCAGCTTTTCTTCTAGC+TGG - Chr3:13319170-13319189 None:intergenic 35.0%
! CCATTTTACAATTGTCTTCG+AGG - Chr3:13314375-13314394 None:intergenic 35.0%
! CTGCAAAAGGTTTCAGTTTT+TGG - Chr3:13319001-13319020 None:intergenic 35.0%
! GAGATATGGTTTTTGTGCTA+TGG - Chr3:13315770-13315789 None:intergenic 35.0%
! TATGGTCCTACTGCATATTT+TGG + Chr3:13316413-13316432 MsG0380012250.01.T01:CDS 35.0%
!! ATACGTTTTGTGTCTGGTTT+TGG - Chr3:13318139-13318158 None:intergenic 35.0%
!! ATACTGCTTTTGTGCCAATT+TGG + Chr3:13317802-13317821 MsG0380012250.01.T01:intron 35.0%
!! ATTTGGAGAATGGTTTTACG+AGG + Chr3:13316883-13316902 MsG0380012250.01.T01:intron 35.0%
!! GCTGTTTTCATAGACTATCT+TGG + Chr3:13313951-13313970 MsG0380012250.01.T01:intron 35.0%
!!! CTTTTTGGCTGTAAACAGTT+AGG + Chr3:13318073-13318092 MsG0380012250.01.T01:intron 35.0%
!!! GTGTTGCACATAGTGTTTTT+TGG + Chr3:13317080-13317099 MsG0380012250.01.T01:intron 35.0%
!!! TGCCTGTCCAACATTTTTTT+TGG + Chr3:13316145-13316164 MsG0380012250.01.T01:intron 35.0%
!!! TTTTGAGTTGCGTCTATATC+AGG + Chr3:13318386-13318405 MsG0380012250.01.T01:CDS 35.0%
AAAGTTAGAGAAGCTCTTCG+AGG + Chr3:13312918-13312937 MsG0380012250.01.T01:CDS 40.0%
AACCATACAATGGGCATGTT+TGG - Chr3:13314064-13314083 None:intergenic 40.0%
AAGATTAGGTGCTCTATCAC+TGG + Chr3:13317529-13317548 MsG0380012250.01.T01:intron 40.0%
AGACCAACTCAAGAACAGAT+CGG - Chr3:13318591-13318610 None:intergenic 40.0%
AGTCTGACTATATCTCGTTC+AGG + Chr3:13318176-13318195 MsG0380012250.01.T01:CDS 40.0%
ATAACCCTTGTGAGACTGTT+TGG - Chr3:13314013-13314032 None:intergenic 40.0%
ATCCAAACATGCCCATTGTA+TGG + Chr3:13314059-13314078 MsG0380012250.01.T01:intron 40.0%
ATGCAGAGTAGCATCTAATG+AGG + Chr3:13317144-13317163 MsG0380012250.01.T01:intron 40.0%
ATGGTGAAGAAACTGTACAC+CGG - Chr3:13312776-13312795 None:intergenic 40.0%
ATTAGAGACAGAAAAGCCGT+TGG + Chr3:13316534-13316553 MsG0380012250.01.T01:CDS 40.0%
CAATGTGAACATATGCTTGG+TGG - Chr3:13317632-13317651 None:intergenic 40.0%
CACTTAACTTATGCTCTTGC+AGG - Chr3:13317063-13317082 None:intergenic 40.0%
CACTTTGAGCCTATTTGCAT+TGG - Chr3:13313902-13313921 None:intergenic 40.0%
CAGTGAGTTCAGTGTAACTA+CGG - Chr3:13315219-13315238 None:intergenic 40.0%
CGAGATATAGTCAGACTTGT+TGG - Chr3:13318173-13318192 None:intergenic 40.0%
CTCTATCACTGGAATACTTG+TGG + Chr3:13317540-13317559 MsG0380012250.01.T01:intron 40.0%
CTGTGATTAAGGTGGTTAGA+TGG - Chr3:13312795-13312814 None:intergenic 40.0%
CTTCTTTGACAAGAAGCAAG+AGG - Chr3:13315643-13315662 None:intergenic 40.0%
GAACTTTCTGTGATTGATGG+AGG + Chr3:13319101-13319120 MsG0380012250.01.T01:exon 40.0%
GACCTTACATGAACACTACA+CGG + Chr3:13319073-13319092 MsG0380012250.01.T01:CDS 40.0%
GAGGAACTTTCTGTGATTGA+TGG + Chr3:13319098-13319117 MsG0380012250.01.T01:exon 40.0%
GCTAATATGTTGTTCCTTGC+AGG + Chr3:13316497-13316516 MsG0380012250.01.T01:intron 40.0%
GCTGTAAACAGTTAGGTGAA+AGG + Chr3:13318080-13318099 MsG0380012250.01.T01:intron 40.0%
GTGACTCTGTTTATTCGATC+TGG + Chr3:13316107-13316126 MsG0380012250.01.T01:intron 40.0%
TAACCCTTGTGAGACTGTTT+GGG - Chr3:13314012-13314031 None:intergenic 40.0%
TACAATGGGCATGTTTGGAT+TGG - Chr3:13314059-13314078 None:intergenic 40.0%
TATAGACGCAACTCAAAACG+TGG - Chr3:13318384-13318403 None:intergenic 40.0%
TATCCGACCTTAGGTCAATT+TGG + Chr3:13317504-13317523 MsG0380012250.01.T01:intron 40.0%
TCAAAGGCTCAAAAGTCTTC+TGG - Chr3:13314887-13314906 None:intergenic 40.0%
TCAAATACCCCATGAGTACA+CGG - Chr3:13317463-13317482 None:intergenic 40.0%
TGAGACACTAAACTCAGCAA+GGG + Chr3:13319330-13319349 MsG0380012250.01.T01:three_prime_UTR 40.0%
TTATATGCCGTGTACTCATG+GGG + Chr3:13317453-13317472 MsG0380012250.01.T01:intron 40.0%
TTCCGTGTAGTGTTCATGTA+AGG - Chr3:13319078-13319097 None:intergenic 40.0%
TTGAGACACTAAACTCAGCA+AGG + Chr3:13319329-13319348 MsG0380012250.01.T01:three_prime_UTR 40.0%
TTTCCGATCTGTTCTTGAGT+TGG + Chr3:13318585-13318604 MsG0380012250.01.T01:intron 40.0%
! ACTGTAAACAGCTTGGTGAA+AGG + Chr3:13317825-13317844 MsG0380012250.01.T01:intron 40.0%
! CTGTAAACAGCTTGGTGAAA+GGG + Chr3:13317826-13317845 MsG0380012250.01.T01:intron 40.0%
! GATGTGGTCAGCAGAATTTT+AGG - Chr3:13315089-13315108 None:intergenic 40.0%
! GTGACAATACGTTTTGTGTC+TGG - Chr3:13318145-13318164 None:intergenic 40.0%
! TCAATCATGGTTCTGTTGAC+AGG + Chr3:13316992-13317011 MsG0380012250.01.T01:intron 40.0%
!! AAAGCATTTTTCCACGAGGT+CGG - Chr3:13317360-13317379 None:intergenic 40.0%
!! CAACAAAGCATTTTTCCACG+AGG - Chr3:13317364-13317383 None:intergenic 40.0%
!! TCGGATAAATAACGGGTGAA+AGG - Chr3:13316678-13316697 None:intergenic 40.0%
!!! GTGACGCTGTTTTGAAGAAT+TGG - Chr3:13313847-13313866 None:intergenic 40.0%
AAATTCTGCTGACCACATCC+AGG + Chr3:13315090-13315109 MsG0380012250.01.T01:CDS 45.0%
AAGAATGAATCGTGGTGGTC+AGG + Chr3:13315300-13315319 MsG0380012250.01.T01:CDS 45.0%
AATTCTGCTGACCACATCCA+GGG + Chr3:13315091-13315110 MsG0380012250.01.T01:CDS 45.0%
ACATGAACACTACACGGAAG+AGG + Chr3:13319079-13319098 MsG0380012250.01.T01:CDS 45.0%
ACCGTGATGTCCATAGCATT+TGG + Chr3:13316839-13316858 MsG0380012250.01.T01:intron 45.0%
ACGTGTACAGTAGTTTAGCC+AGG + Chr3:13317183-13317202 MsG0380012250.01.T01:intron 45.0%
ACTGGAATACTTGTGGACGT+AGG + Chr3:13317547-13317566 MsG0380012250.01.T01:intron 45.0%
AGATCAATCATGCAGGAGAC+TGG - Chr3:13316911-13316930 None:intergenic 45.0%
ATCTTGGTTCATGAACACCG+AGG + Chr3:13316356-13316375 MsG0380012250.01.T01:CDS 45.0%
CTCGAAGATGAAAACACAGC+TGG + Chr3:13313104-13313123 MsG0380012250.01.T01:CDS 45.0%
GACAAGAAGCAAGAGGAGTA+AGG - Chr3:13315636-13315655 None:intergenic 45.0%
GAGCTGTAGTAGTTAGAGCA+TGG + Chr3:13314317-13314336 MsG0380012250.01.T01:intron 45.0%
GATACTCTCTTCGCAAACGT+TGG - Chr3:13312845-13312864 None:intergenic 45.0%
GATTCATATAACCGACCTCG+TGG + Chr3:13317346-13317365 MsG0380012250.01.T01:intron 45.0%
GCCAAATGCTATGGACATCA+CGG - Chr3:13316843-13316862 None:intergenic 45.0%
GCTGAAAGAATGAATCGTGG+TGG + Chr3:13315295-13315314 MsG0380012250.01.T01:CDS 45.0%
GTTGTTCCTTGCAGGTTACA+AGG + Chr3:13316505-13316524 MsG0380012250.01.T01:intron 45.0%
TCCCTCAGCAACCATACAAT+GGG - Chr3:13314073-13314092 None:intergenic 45.0%
TCTCCCAAACAGTCTCACAA+GGG + Chr3:13314006-13314025 MsG0380012250.01.T01:intron 45.0%
TTAAACCATCTGGCACACCT+CGG - Chr3:13316376-13316395 None:intergenic 45.0%
TTATGCTCTTGCAGGCGATT+AGG - Chr3:13317055-13317074 None:intergenic 45.0%
TTCACAGGCCTGATTCAAAG+AGG - Chr3:13315543-13315562 None:intergenic 45.0%
TTCATGCCTTGTAACCTGCA+AGG - Chr3:13316514-13316533 None:intergenic 45.0%
TTCCCTCAGCAACCATACAA+TGG - Chr3:13314074-13314093 None:intergenic 45.0%
TTCTCCCAAACAGTCTCACA+AGG + Chr3:13314005-13314024 MsG0380012250.01.T01:intron 45.0%
TTGAGGCATACATGAGGAAC+AGG - Chr3:13316027-13316046 None:intergenic 45.0%
TTGTGTTCATCCACGTGTAC+TGG + Chr3:13317397-13317416 MsG0380012250.01.T01:intron 45.0%
! TGTTACTGTGCTGTTAGTGC+AGG + Chr3:13319139-13319158 MsG0380012250.01.T01:three_prime_UTR 45.0%
!!! TTTGTGTCTGGTTTTGGCAC+CGG - Chr3:13318133-13318152 None:intergenic 45.0%
!! TTAATGAATTATTATATTTA+AGG - Chr3:13316193-13316212 None:intergenic 5.0%
ACCTACTGAGCTGAGAAACG+AGG + Chr3:13313055-13313074 MsG0380012250.01.T01:CDS 50.0%
ATAACACAGGCCAGTACACG+TGG - Chr3:13317410-13317429 None:intergenic 50.0%
ATATGGGGAGTGGGGTTTGA+TGG + Chr3:13314982-13315001 MsG0380012250.01.T01:intron 50.0%
ATGAATCGTGGTGGTCAGGT+TGG + Chr3:13315304-13315323 MsG0380012250.01.T01:intron 50.0%
GCCCATTGTATGGTTGCTGA+GGG + Chr3:13314069-13314088 MsG0380012250.01.T01:intron 50.0%
GTGAAGAAACTGTACACCGG+CGG - Chr3:13312773-13312792 None:intergenic 50.0%
GTGTCTCTCATATGGGGAGT+GGG + Chr3:13314973-13314992 MsG0380012250.01.T01:intron 50.0%
GTTCTGTTGACAGGTTACCC+TGG + Chr3:13317001-13317020 MsG0380012250.01.T01:intron 50.0%
GTTGCTGAGGGAATGAGCAT+GGG + Chr3:13314081-13314100 MsG0380012250.01.T01:intron 50.0%
TACTGAGCTGAGAAACGAGG+AGG + Chr3:13313058-13313077 MsG0380012250.01.T01:CDS 50.0%
TATGGGGAGTGGGGTTTGAT+GGG + Chr3:13314983-13315002 MsG0380012250.01.T01:intron 50.0%
TCCTCGTTTCTCAGCTCAGT+AGG - Chr3:13313059-13313078 None:intergenic 50.0%
TGAAGAAACTGTACACCGGC+GGG - Chr3:13312772-13312791 None:intergenic 50.0%
TGCCCATTGTATGGTTGCTG+AGG + Chr3:13314068-13314087 MsG0380012250.01.T01:intron 50.0%
TGTCTCTCATATGGGGAGTG+GGG + Chr3:13314974-13314993 MsG0380012250.01.T01:intron 50.0%
TGTGTCTCTCATATGGGGAG+TGG + Chr3:13314972-13314991 MsG0380012250.01.T01:intron 50.0%
! AACTGTTTGAGTGGAGCGCT+TGG - Chr3:13315119-13315138 None:intergenic 50.0%
AGCTTCGGGCATGGTTCCAA+CGG - Chr3:13316553-13316572 None:intergenic 55.0%
ATGCGGATAAGCTTCGGGCA+TGG - Chr3:13316562-13316581 None:intergenic 55.0%
GCTCTTGCAGGCGATTAGGT+GGG - Chr3:13317051-13317070 None:intergenic 55.0%
GGTTGCTGAGGGAATGAGCA+TGG + Chr3:13314080-13314099 MsG0380012250.01.T01:intron 55.0%
TGAGCTGAGAAACGAGGAGG+CGG + Chr3:13313061-13313080 MsG0380012250.01.T01:CDS 55.0%
TGCTCTTGCAGGCGATTAGG+TGG - Chr3:13317052-13317071 None:intergenic 55.0%
! AGAAGGTGCAGCGACGAAGA+AGG - Chr3:13312729-13312748 None:intergenic 55.0%
! GAAGGTGCAGCGACGAAGAA+GGG - Chr3:13312728-13312747 None:intergenic 55.0%
!! GCTTCTAGGGTCTTCTCACC+TGG - Chr3:13317204-13317223 None:intergenic 55.0%
AGCGCTTGGATCCCTGGATG+TGG - Chr3:13315105-13315124 None:intergenic 60.0%
CCACTCGAGCCCAACCAATG+TGG - Chr3:13314217-13314236 None:intergenic 60.0%
GAACACCGAGGTGTGCCAGA+TGG + Chr3:13316368-13316387 MsG0380012250.01.T01:CDS 60.0%
! CCACATTGGTTGGGCTCGAG+TGG + Chr3:13314214-13314233 MsG0380012250.01.T01:intron 60.0%
GAAACGAGGAGGCGGCGCTT+CGG + Chr3:13313069-13313088 MsG0380012250.01.T01:CDS 65.0%
GCAACGGCTGACGTCGGAGA+AGG - Chr3:13312746-13312765 None:intergenic 65.0%
! GAGTGGAGCGCTTGGATCCC+TGG - Chr3:13315111-13315130 None:intergenic 65.0%
! GGGAGTGCAACGGCTGACGT+CGG - Chr3:13312752-13312771 None:intergenic 65.0%
! GTACACCGGCGGGAGTGCAA+CGG - Chr3:13312762-13312781 None:intergenic 65.0%
GTCAGCCGTTGCACTCCCGC+CGG + Chr3:13312754-13312773 MsG0380012250.01.T01:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 13312701 13319492 13312701 ID=MsG0380012250.01;Name=MsG0380012250.01
Chr3 mRNA 13312701 13319492 13312701 ID=MsG0380012250.01.T01;Parent=MsG0380012250.01;Name=MsG0380012250.01.T01;_AED=0.44;_eAED=0.44;_QI=127|1|1|1|1|1|9|379|291
Chr3 exon 13312701 13312939 13312701 ID=MsG0380012250.01.T01:exon:21234;Parent=MsG0380012250.01.T01
Chr3 exon 13313042 13313125 13313042 ID=MsG0380012250.01.T01:exon:21235;Parent=MsG0380012250.01.T01
Chr3 exon 13315036 13315145 13315036 ID=MsG0380012250.01.T01:exon:21236;Parent=MsG0380012250.01.T01
Chr3 exon 13315271 13315321 13315271 ID=MsG0380012250.01.T01:exon:21237;Parent=MsG0380012250.01.T01
Chr3 exon 13316305 13316448 13316305 ID=MsG0380012250.01.T01:exon:21238;Parent=MsG0380012250.01.T01
Chr3 exon 13316519 13316608 13316519 ID=MsG0380012250.01.T01:exon:21239;Parent=MsG0380012250.01.T01
Chr3 exon 13318091 13318197 13318091 ID=MsG0380012250.01.T01:exon:21240;Parent=MsG0380012250.01.T01
Chr3 exon 13318323 13318407 13318323 ID=MsG0380012250.01.T01:exon:21241;Parent=MsG0380012250.01.T01
Chr3 exon 13319021 13319492 13319021 ID=MsG0380012250.01.T01:exon:21242;Parent=MsG0380012250.01.T01
Chr3 five_prime_UTR 13312701 13312827 13312701 ID=MsG0380012250.01.T01:five_prime_utr;Parent=MsG0380012250.01.T01
Chr3 CDS 13312828 13312939 13312828 ID=MsG0380012250.01.T01:cds;Parent=MsG0380012250.01.T01
Chr3 CDS 13313042 13313125 13313042 ID=MsG0380012250.01.T01:cds;Parent=MsG0380012250.01.T01
Chr3 CDS 13315036 13315145 13315036 ID=MsG0380012250.01.T01:cds;Parent=MsG0380012250.01.T01
Chr3 CDS 13315271 13315321 13315271 ID=MsG0380012250.01.T01:cds;Parent=MsG0380012250.01.T01
Chr3 CDS 13316305 13316448 13316305 ID=MsG0380012250.01.T01:cds;Parent=MsG0380012250.01.T01
Chr3 CDS 13316519 13316608 13316519 ID=MsG0380012250.01.T01:cds;Parent=MsG0380012250.01.T01
Chr3 CDS 13318091 13318197 13318091 ID=MsG0380012250.01.T01:cds;Parent=MsG0380012250.01.T01
Chr3 CDS 13318323 13318407 13318323 ID=MsG0380012250.01.T01:cds;Parent=MsG0380012250.01.T01
Chr3 CDS 13319021 13319113 13319021 ID=MsG0380012250.01.T01:cds;Parent=MsG0380012250.01.T01
Chr3 three_prime_UTR 13319114 13319492 13319114 ID=MsG0380012250.01.T01:three_prime_utr;Parent=MsG0380012250.01.T01
Gene Sequence

>MsG0380012250.01.T01

ATGTTGCGTAGAAACCAACGTTTGCGAAGAGAGTATCTATACAGAAAAAGCTTAGAAGGAAAAGAGCGTGTTCATTATGAGAATAAACGCAAAGTTAGAGAAGCTCTTCGAGAGGGGAAGTCTATACCTACTGAGCTGAGAAACGAGGAGGCGGCGCTTCGGCGCGAAATTGATCTCGAAGATGAAAACACAGCTGTCCCAAGATCACACATTGATGATGAGTATGCATTTGCTGCCGAGAAAGATCCTAAAATTCTGCTGACCACATCCAGGGATCCAAGCGCTCCACTCAAACAGTTTGTAAAGGAGTTGAGTATCGTGTTTCCCAATGCTGAAAGAATGAATCGTGGTGGTCAGGTTATTTCAGAGATTATAAATTCTTGCCGATCACATGACTATACAGATGTTATCTTGGTTCATGAACACCGAGGTGTGCCAGATGGTTTAATAGTTTGTCATCTACCATATGGTCCTACTGCATATTTTGGATTACTCAATGTGGTTACAAGGCATGAAATTAGAGACAGAAAAGCCGTTGGAACCATGCCCGAAGCTTATCCGCATATTATTCTTGATAATTTTGAAACTAAGTTAGGTGAAAGGACTGCCAACATTCTAAAACATCTGTTTCCGGTGCCAAAACCAGACACAAAACGTATTGTCACTTTTGCCAACAAGTCTGACTATATCTCGTTCAGGCATCATATATATGAAAAGCAGGCGGGTCCTAAATCTGTAGAATTGAAGGAAATTGGTCCACGTTTTGAGTTGCGTCTATATCAGATAAAATTAGGAACAGTGGATCAAGCTGAAGCACAAACAGAGTTTGTCATCAGACCTTACATGAACACTACACGGAAGAGGAACTTTCTGTGA
Protein sequence

>MsG0380012250.01.T01

MLRRNQRLRREYLYRKSLEGKERVHYENKRKVREALREGKSIPTELRNEEAALRREIDLEDENTAVPRSHIDDEYAFAAEKDPKILLTTSRDPSAPLKQFVKELSIVFPNAERMNRGGQVISEIINSCRSHDYTDVILVHEHRGVPDGLIVCHLPYGPTAYFGLLNVVTRHEIRDRKAVGTMPEAYPHIILDNFETKLGERTANILKHLFPVPKPDTKRIVTFANKSDYISFRHHIYEKQAGPKSVELKEIGPRFELRLYQIKLGTVDQAEAQTEFVIRPYMNTTRKRNFL*