Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019357.01.T01 | XP_003620929.2 | 56.319 | 364 | 143 | 6 | 1 | 349 | 2 | 364 | 2.27E-125 | 375 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019357.01.T01 | B3H6C3 | 27.095 | 358 | 217 | 12 | 8 | 332 | 7 | 353 | 5.97E-26 | 110 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019357.01.T01 | G7KJU2 | 56.319 | 364 | 143 | 6 | 1 | 349 | 2 | 364 | 1.09e-125 | 375 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019357.01.T01 | MTR_6g092570 | 56.319 | 364 | 143 | 6 | 1 | 349 | 2 | 364 | 2.75e-129 | 375 |
MsG0480019357.01.T01 | MTR_5g079830 | 54.217 | 332 | 130 | 8 | 6 | 317 | 5 | 334 | 5.54e-100 | 301 |
MsG0480019357.01.T01 | MTR_8g085760 | 39.211 | 380 | 176 | 12 | 2 | 333 | 8 | 380 | 1.44e-72 | 231 |
MsG0480019357.01.T01 | MTR_4g125090 | 45.973 | 298 | 123 | 7 | 1 | 283 | 39 | 313 | 2.23e-72 | 228 |
MsG0480019357.01.T01 | MTR_4g088925 | 40.793 | 353 | 171 | 10 | 13 | 333 | 31 | 377 | 6.48e-67 | 216 |
MsG0480019357.01.T01 | MTR_7g096720 | 40.274 | 365 | 175 | 10 | 10 | 333 | 16 | 378 | 2.51e-66 | 214 |
MsG0480019357.01.T01 | MTR_8g074610 | 32.552 | 384 | 185 | 15 | 1 | 329 | 20 | 384 | 1.26e-43 | 155 |
MsG0480019357.01.T01 | MTR_2g041510 | 32.095 | 377 | 189 | 15 | 3 | 326 | 2 | 364 | 7.35e-41 | 147 |
MsG0480019357.01.T01 | MTR_2g041510 | 32.095 | 377 | 189 | 15 | 3 | 326 | 22 | 384 | 8.59e-41 | 148 |
MsG0480019357.01.T01 | MTR_8g074640 | 31.302 | 361 | 186 | 10 | 3 | 313 | 2 | 350 | 7.77e-40 | 145 |
MsG0480019357.01.T01 | MTR_3g030360 | 29.363 | 361 | 199 | 15 | 5 | 327 | 3 | 345 | 3.38e-21 | 93.6 |
MsG0480019357.01.T01 | MTR_3g029840 | 27.273 | 330 | 191 | 12 | 6 | 302 | 4 | 317 | 1.08e-20 | 92.4 |
MsG0480019357.01.T01 | MTR_3g029950 | 28.173 | 323 | 185 | 10 | 11 | 302 | 11 | 317 | 1.23e-19 | 89.4 |
MsG0480019357.01.T01 | MTR_2g047180 | 27.586 | 377 | 203 | 14 | 4 | 327 | 1 | 360 | 2.02e-19 | 89.0 |
MsG0480019357.01.T01 | MTR_6g018390 | 27.926 | 376 | 202 | 15 | 4 | 327 | 2 | 360 | 3.66e-19 | 88.2 |
MsG0480019357.01.T01 | MTR_3g030080 | 28.440 | 327 | 194 | 12 | 7 | 302 | 7 | 324 | 6.51e-19 | 87.4 |
MsG0480019357.01.T01 | MTR_1g016570 | 25.895 | 363 | 198 | 12 | 7 | 327 | 21 | 354 | 5.13e-18 | 84.7 |
MsG0480019357.01.T01 | MTR_3g029920 | 29.380 | 371 | 199 | 18 | 4 | 327 | 6 | 360 | 1.17e-17 | 84.0 |
MsG0480019357.01.T01 | MTR_3g030380 | 28.035 | 346 | 205 | 13 | 5 | 322 | 3 | 332 | 1.01e-16 | 80.9 |
MsG0480019357.01.T01 | MTR_3g029650 | 24.633 | 341 | 183 | 9 | 6 | 302 | 4 | 314 | 1.88e-14 | 75.1 |
MsG0480019357.01.T01 | MTR_6g018400 | 25.217 | 345 | 210 | 12 | 6 | 315 | 4 | 335 | 3.48e-14 | 73.6 |
MsG0480019357.01.T01 | MTR_3g029640 | 26.593 | 361 | 203 | 17 | 4 | 323 | 1 | 340 | 2.12e-13 | 71.2 |
MsG0480019357.01.T01 | MTR_3g058460 | 24.866 | 374 | 210 | 15 | 7 | 327 | 15 | 370 | 3.97e-13 | 70.5 |
MsG0480019357.01.T01 | MTR_3g029900 | 26.087 | 253 | 180 | 5 | 61 | 310 | 177 | 425 | 3.99e-13 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019357.01.T01 | AT4G35733 | 27.095 | 358 | 217 | 12 | 8 | 332 | 7 | 353 | 6.09e-27 | 110 |
MsG0480019357.01.T01 | AT2G17030 | 28.909 | 339 | 178 | 12 | 6 | 291 | 2 | 330 | 1.51e-25 | 107 |
MsG0480019357.01.T01 | AT1G65770 | 25.341 | 367 | 221 | 13 | 6 | 332 | 2 | 355 | 8.91e-25 | 103 |
MsG0480019357.01.T01 | AT2G26160 | 26.269 | 335 | 215 | 11 | 5 | 314 | 3 | 330 | 7.13e-24 | 100 |
MsG0480019357.01.T01 | AT3G25750 | 25.904 | 332 | 197 | 13 | 5 | 302 | 3 | 319 | 1.02e-22 | 98.2 |
MsG0480019357.01.T01 | AT3G25750 | 25.000 | 324 | 196 | 10 | 5 | 302 | 3 | 305 | 6.93e-22 | 95.9 |
MsG0480019357.01.T01 | AT2G17036 | 28.529 | 333 | 182 | 15 | 6 | 291 | 1 | 324 | 5.72e-21 | 94.0 |
MsG0480019357.01.T01 | AT2G17036 | 28.529 | 333 | 182 | 15 | 6 | 291 | 2 | 325 | 6.16e-21 | 93.6 |
MsG0480019357.01.T01 | AT1G44080 | 26.608 | 342 | 191 | 16 | 5 | 313 | 3 | 317 | 7.42e-20 | 89.7 |
MsG0480019357.01.T01 | AT1G65740 | 24.716 | 352 | 212 | 15 | 6 | 313 | 2 | 344 | 3.83e-16 | 79.3 |
MsG0480019357.01.T01 | AT5G60060 | 22.642 | 318 | 203 | 12 | 7 | 287 | 10 | 321 | 7.01e-13 | 69.7 |
Find 65 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTACTTCCATACTGAAAA+AGG | 0.156545 | 4:-18995840 | MsG0480019357.01.T01:CDS |
TTCGAGGTATTTGTCCTTTA+TGG | 0.186898 | 4:-18996640 | MsG0480019357.01.T01:CDS |
GGGTGACCATTCCTTTCTTT+TGG | 0.198402 | 4:-18995922 | MsG0480019357.01.T01:CDS |
GATTGAAGACTTCAGAATTT+AGG | 0.213391 | 4:-18995803 | MsG0480019357.01.T01:CDS |
CGAAAATTGAACCAACTTAA+AGG | 0.246773 | 4:+18996091 | None:intergenic |
ACATTCTCAACGGGACTAAA+TGG | 0.253643 | 4:+18996320 | None:intergenic |
ATGGTTTCATACAAAATGTT+TGG | 0.296556 | 4:-18995943 | MsG0480019357.01.T01:CDS |
AAATAATAAGTTGGTACTAA+TGG | 0.298258 | 4:+18996527 | None:intergenic |
ATGGAAGAGGAACCGTTTAT+TGG | 0.318662 | 4:-18996127 | MsG0480019357.01.T01:CDS |
TTCACACTTAAGAGTTCTCT+TGG | 0.360337 | 4:+18995658 | None:intergenic |
TGAATCTTCCTCGAGAACTA+TGG | 0.361490 | 4:-18996712 | MsG0480019357.01.T01:CDS |
ATCTAAGATACAAAGTTTGC+CGG | 0.369847 | 4:+18996466 | None:intergenic |
TGATGATATGATCCTTCATA+AGG | 0.371508 | 4:-18996168 | MsG0480019357.01.T01:CDS |
TGGTTTCATACAAAATGTTT+GGG | 0.379259 | 4:-18995942 | MsG0480019357.01.T01:CDS |
TTTCACAAATTTACGAGTTA+CGG | 0.388090 | 4:-18996396 | MsG0480019357.01.T01:CDS |
TTATGTGATGGATGACATTA+AGG | 0.397110 | 4:-18996744 | None:intergenic |
TATCAGAATTGAACAAAGTT+AGG | 0.400937 | 4:+18995754 | None:intergenic |
TTTGATGTTATTAGATTTCG+AGG | 0.416643 | 4:-18996656 | MsG0480019357.01.T01:CDS |
TTTACCAGGGCTGTTTAAGT+TGG | 0.435551 | 4:+18996067 | None:intergenic |
TTGTGAGGATCGTGGTCAAC+CGG | 0.436124 | 4:-18996279 | MsG0480019357.01.T01:CDS |
GATGATATGATCCTTCATAA+GGG | 0.440800 | 4:-18996167 | MsG0480019357.01.T01:CDS |
TTATCAACTAAAGATTATCA+TGG | 0.442519 | 4:-18995879 | MsG0480019357.01.T01:CDS |
TGAGTCTTTACCCAAAAGAA+AGG | 0.443511 | 4:+18995911 | None:intergenic |
GTTGATATATATATAAATAT+TGG | 0.446094 | 4:-18996005 | MsG0480019357.01.T01:CDS |
CAATGGTTCATCCTTTAAGT+TGG | 0.449982 | 4:-18996102 | MsG0480019357.01.T01:CDS |
TAAAACTAAAATATATCGTC+TGG | 0.453034 | 4:-18996552 | MsG0480019357.01.T01:CDS |
CCTTTATTAAAATAATAAGT+TGG | 0.455626 | 4:+18996518 | None:intergenic |
GGAACCGTTTATTGGTTCAA+TGG | 0.458142 | 4:-18996119 | MsG0480019357.01.T01:CDS |
TTACCAGGGCTGTTTAAGTT+GGG | 0.460353 | 4:+18996068 | None:intergenic |
GCTTGAATATAGAGAATTGT+GGG | 0.469339 | 4:-18996246 | MsG0480019357.01.T01:CDS |
TGAAATCTAACACCTTTCCA+TGG | 0.484459 | 4:+18996414 | None:intergenic |
TATAACAATTTGAAGAGAGT+TGG | 0.484971 | 4:-18996209 | MsG0480019357.01.T01:CDS |
GGAATAATAGAGCGCCATAA+AGG | 0.485905 | 4:+18996626 | None:intergenic |
TTACCATGTATAATGCGAAA+GGG | 0.496052 | 4:+18996587 | None:intergenic |
TGAACCATTGAACCAATAAA+CGG | 0.496596 | 4:+18996115 | None:intergenic |
CAAATTGTTATATCTAACAT+TGG | 0.498238 | 4:+18996220 | None:intergenic |
GTTCAATTCTGATAGTGTAT+CGG | 0.508263 | 4:-18995745 | MsG0480019357.01.T01:CDS |
TTTACCATGTATAATGCGAA+AGG | 0.511073 | 4:+18996586 | None:intergenic |
ATATATGTTGTGGATGGAAG+AGG | 0.511320 | 4:-18996140 | MsG0480019357.01.T01:CDS |
GTCACAAGGAAGTCTCTTTG+TGG | 0.513249 | 4:-18996027 | MsG0480019357.01.T01:CDS |
TCACACTTAAGAGTTCTCTT+GGG | 0.518317 | 4:+18995659 | None:intergenic |
CATATATCTTCCCCTTATGA+AGG | 0.526808 | 4:+18996156 | None:intergenic |
TTGGTGATATCAAAGTTTCA+AGG | 0.528424 | 4:-18995986 | MsG0480019357.01.T01:CDS |
GGGAAGATATATGTTGTGGA+TGG | 0.536920 | 4:-18996146 | MsG0480019357.01.T01:CDS |
GGCATAGTTAGTTTCTCCAA+CGG | 0.539120 | 4:+18995680 | None:intergenic |
TCGCCCAACTTAAACAGCCC+TGG | 0.542368 | 4:-18996071 | MsG0480019357.01.T01:CDS |
ACCATGTATAATGCGAAAGG+GGG | 0.549997 | 4:+18996589 | None:intergenic |
TGCTTGAATATAGAGAATTG+TGG | 0.576215 | 4:-18996247 | MsG0480019357.01.T01:CDS |
TATTCAAGCAAAGCAAAGAC+CGG | 0.580479 | 4:+18996260 | None:intergenic |
GAAATCTAACACCTTTCCAT+GGG | 0.583924 | 4:+18996415 | None:intergenic |
TCTAAGATACAAAGTTTGCC+GGG | 0.584070 | 4:+18996467 | None:intergenic |
TAAGGGGAAGATATATGTTG+TGG | 0.584734 | 4:-18996150 | MsG0480019357.01.T01:CDS |
TACCATGTATAATGCGAAAG+GGG | 0.587012 | 4:+18996588 | None:intergenic |
TGGATGACATTAAGGTGGAA+TGG | 0.588286 | 4:-18996736 | MsG0480019357.01.T01:CDS |
ATGATATGATCCTTCATAAG+GGG | 0.591612 | 4:-18996166 | MsG0480019357.01.T01:CDS |
ACTCACATCTTACATACCCA+TGG | 0.596417 | 4:-18996431 | MsG0480019357.01.T01:CDS |
GATGAGCTCAAAGAAACCGT+TGG | 0.602811 | 4:-18995696 | MsG0480019357.01.T01:CDS |
AAGTATTTGGTGGAGTCACA+AGG | 0.616227 | 4:-18996041 | MsG0480019357.01.T01:CDS |
ATAACTAACCATAGTTCTCG+AGG | 0.624318 | 4:+18996704 | None:intergenic |
AAGATTGAAGAAACAAAACC+CGG | 0.625861 | 4:-18996485 | MsG0480019357.01.T01:CDS |
CATCTTACATACCCATGGAA+AGG | 0.626732 | 4:-18996426 | MsG0480019357.01.T01:CDS |
CTTTACCCAAAAGAAAGGAA+TGG | 0.637754 | 4:+18995916 | None:intergenic |
GAATTGAACAAAGTTAGGCA+AGG | 0.651866 | 4:+18995759 | None:intergenic |
CCATGTATAATGCGAAAGGG+GGG | 0.667737 | 4:+18996590 | None:intergenic |
TGTGATGGATGACATTAAGG+TGG | 0.673350 | 4:-18996741 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTTGATATATATATAAATAT+TGG | - | Chr4:18996397-18996416 | MsG0480019357.01.T01:CDS | 10.0% |
!! | CCTTTATTAAAATAATAAGT+TGG | + | Chr4:18995887-18995906 | None:intergenic | 15.0% |
!!! | CCAACTTATTATTTTAATAA+AGG | - | Chr4:18995884-18995903 | MsG0480019357.01.T01:CDS | 15.0% |
!!! | CTTATTATTTTAATAAAGGA+TGG | - | Chr4:18995888-18995907 | MsG0480019357.01.T01:CDS | 15.0% |
!! | CAAATTGTTATATCTAACAT+TGG | + | Chr4:18996185-18996204 | None:intergenic | 20.0% |
!! | TAAAACTAAAATATATCGTC+TGG | - | Chr4:18995850-18995869 | MsG0480019357.01.T01:CDS | 20.0% |
!! | TTATCAACTAAAGATTATCA+TGG | - | Chr4:18996523-18996542 | MsG0480019357.01.T01:CDS | 20.0% |
!! | TTGATGAAAAATCAAATAGA+TGG | - | Chr4:18996440-18996459 | MsG0480019357.01.T01:CDS | 20.0% |
!!! | AAATAATAAGTTGGTACTAA+TGG | + | Chr4:18995878-18995897 | None:intergenic | 20.0% |
!!! | TATTTTACAAACATTCTCAA+CGG | + | Chr4:18996095-18996114 | None:intergenic | 20.0% |
! | ATGGTTTCATACAAAATGTT+TGG | - | Chr4:18996459-18996478 | MsG0480019357.01.T01:CDS | 25.0% |
! | ATTTACTTCCATACTGAAAA+AGG | - | Chr4:18996562-18996581 | MsG0480019357.01.T01:CDS | 25.0% |
! | TATAACAATTTGAAGAGAGT+TGG | - | Chr4:18996193-18996212 | MsG0480019357.01.T01:CDS | 25.0% |
! | TATCAGAATTGAACAAAGTT+AGG | + | Chr4:18996651-18996670 | None:intergenic | 25.0% |
! | TGGTAAAAATAAGTATTTGG+TGG | - | Chr4:18996351-18996370 | MsG0480019357.01.T01:CDS | 25.0% |
! | TGGTTTCATACAAAATGTTT+GGG | - | Chr4:18996460-18996479 | MsG0480019357.01.T01:CDS | 25.0% |
! | TTTACTTCCATACTGAAAAA+GGG | - | Chr4:18996563-18996582 | MsG0480019357.01.T01:CDS | 25.0% |
! | TTTCACAAATTTACGAGTTA+CGG | - | Chr4:18996006-18996025 | MsG0480019357.01.T01:CDS | 25.0% |
! | TTTGATGTTATTAGATTTCG+AGG | - | Chr4:18995746-18995765 | MsG0480019357.01.T01:CDS | 25.0% |
!! | ATTTTACAAACATTCTCAAC+GGG | + | Chr4:18996094-18996113 | None:intergenic | 25.0% |
!! | TAAAATAGTAGTGTTTTGTG+AGG | - | Chr4:18996108-18996127 | MsG0480019357.01.T01:CDS | 25.0% |
!!! | ACCAAATACTTATTTTTACC+AGG | + | Chr4:18996352-18996371 | None:intergenic | 25.0% |
!!! | ACTCTCAATTTTTCTAAAGA+TGG | - | Chr4:18996046-18996065 | MsG0480019357.01.T01:CDS | 25.0% |
!!! | CCAAATACTTATTTTTACCA+GGG | + | Chr4:18996351-18996370 | None:intergenic | 25.0% |
AAGATTGAAGAAACAAAACC+CGG | - | Chr4:18995917-18995936 | MsG0480019357.01.T01:CDS | 30.0% | |
ATGATATGATCCTTCATAAG+GGG | - | Chr4:18996236-18996255 | MsG0480019357.01.T01:CDS | 30.0% | |
CCCTGGTAAAAATAAGTATT+TGG | - | Chr4:18996348-18996367 | MsG0480019357.01.T01:CDS | 30.0% | |
CGAAAATTGAACCAACTTAA+AGG | + | Chr4:18996314-18996333 | None:intergenic | 30.0% | |
GATGATATGATCCTTCATAA+GGG | - | Chr4:18996235-18996254 | MsG0480019357.01.T01:CDS | 30.0% | |
GATTGAAGACTTCAGAATTT+AGG | - | Chr4:18996599-18996618 | MsG0480019357.01.T01:CDS | 30.0% | |
GCTTGAATATAGAGAATTGT+GGG | - | Chr4:18996156-18996175 | MsG0480019357.01.T01:CDS | 30.0% | |
TGAACCATTGAACCAATAAA+CGG | + | Chr4:18996290-18996309 | None:intergenic | 30.0% | |
TGATGATATGATCCTTCATA+AGG | - | Chr4:18996234-18996253 | MsG0480019357.01.T01:CDS | 30.0% | |
TGCTTGAATATAGAGAATTG+TGG | - | Chr4:18996155-18996174 | MsG0480019357.01.T01:CDS | 30.0% | |
TTACCATGTATAATGCGAAA+GGG | + | Chr4:18995818-18995837 | None:intergenic | 30.0% | |
TTTACCATGTATAATGCGAA+AGG | + | Chr4:18995819-18995838 | None:intergenic | 30.0% | |
! | ATCTAAGATACAAAGTTTGC+CGG | + | Chr4:18995939-18995958 | None:intergenic | 30.0% |
! | GTTCAATTCTGATAGTGTAT+CGG | - | Chr4:18996657-18996676 | MsG0480019357.01.T01:CDS | 30.0% |
! | TTGGTGATATCAAAGTTTCA+AGG | - | Chr4:18996416-18996435 | MsG0480019357.01.T01:CDS | 30.0% |
!! | CTCAATTTTTCTAAAGATGG+AGG | - | Chr4:18996049-18996068 | MsG0480019357.01.T01:CDS | 30.0% |
!! | GGCATTTTGATGACATATTT+TGG | - | Chr4:18996620-18996639 | MsG0480019357.01.T01:CDS | 30.0% |
ATAACTAACCATAGTTCTCG+AGG | + | Chr4:18995701-18995720 | None:intergenic | 35.0% | |
ATATATGTTGTGGATGGAAG+AGG | - | Chr4:18996262-18996281 | MsG0480019357.01.T01:CDS | 35.0% | |
CAATGGTTCATCCTTTAAGT+TGG | - | Chr4:18996300-18996319 | MsG0480019357.01.T01:CDS | 35.0% | |
CATATATCTTCCCCTTATGA+AGG | + | Chr4:18996249-18996268 | None:intergenic | 35.0% | |
CTTTACCCAAAAGAAAGGAA+TGG | + | Chr4:18996489-18996508 | None:intergenic | 35.0% | |
GAAATCTAACACCTTTCCAT+GGG | + | Chr4:18995990-18996009 | None:intergenic | 35.0% | |
GAATTGAACAAAGTTAGGCA+AGG | + | Chr4:18996646-18996665 | None:intergenic | 35.0% | |
TAAGGGGAAGATATATGTTG+TGG | - | Chr4:18996252-18996271 | MsG0480019357.01.T01:CDS | 35.0% | |
TACCATGTATAATGCGAAAG+GGG | + | Chr4:18995817-18995836 | None:intergenic | 35.0% | |
TATTCAAGCAAAGCAAAGAC+CGG | + | Chr4:18996145-18996164 | None:intergenic | 35.0% | |
TGAAATCTAACACCTTTCCA+TGG | + | Chr4:18995991-18996010 | None:intergenic | 35.0% | |
TGAGTCTTTACCCAAAAGAA+AGG | + | Chr4:18996494-18996513 | None:intergenic | 35.0% | |
! | TCTAAGATACAAAGTTTGCC+GGG | + | Chr4:18995938-18995957 | None:intergenic | 35.0% |
! | TTCGAGGTATTTGTCCTTTA+TGG | - | Chr4:18995762-18995781 | MsG0480019357.01.T01:CDS | 35.0% |
!!! | ATTCAGTCCCTTTTTCAGTA+TGG | + | Chr4:18996573-18996592 | None:intergenic | 35.0% |
ACATTCTCAACGGGACTAAA+TGG | + | Chr4:18996085-18996104 | None:intergenic | 40.0% | |
ACCATGTATAATGCGAAAGG+GGG | + | Chr4:18995816-18995835 | None:intergenic | 40.0% | |
ACTCACATCTTACATACCCA+TGG | - | Chr4:18995971-18995990 | MsG0480019357.01.T01:CDS | 40.0% | |
ATGGAAGAGGAACCGTTTAT+TGG | - | Chr4:18996275-18996294 | MsG0480019357.01.T01:CDS | 40.0% | |
CATCTTACATACCCATGGAA+AGG | - | Chr4:18995976-18995995 | MsG0480019357.01.T01:CDS | 40.0% | |
GGGAAGATATATGTTGTGGA+TGG | - | Chr4:18996256-18996275 | MsG0480019357.01.T01:CDS | 40.0% | |
TGAATCTTCCTCGAGAACTA+TGG | - | Chr4:18995690-18995709 | MsG0480019357.01.T01:CDS | 40.0% | |
TGGATGACATTAAGGTGGAA+TGG | - | Chr4:18995666-18995685 | MsG0480019357.01.T01:CDS | 40.0% | |
TTTACCAGGGCTGTTTAAGT+TGG | + | Chr4:18996338-18996357 | None:intergenic | 40.0% | |
! | AAGTATTTGGTGGAGTCACA+AGG | - | Chr4:18996361-18996380 | MsG0480019357.01.T01:CDS | 40.0% |
! | GGAATAATAGAGCGCCATAA+AGG | + | Chr4:18995779-18995798 | None:intergenic | 40.0% |
! | GGCATAGTTAGTTTCTCCAA+CGG | + | Chr4:18996725-18996744 | None:intergenic | 40.0% |
! | GGTGACCATTCCTTTCTTTT+GGG | - | Chr4:18996481-18996500 | MsG0480019357.01.T01:CDS | 40.0% |
! | TTACCAGGGCTGTTTAAGTT+GGG | + | Chr4:18996337-18996356 | None:intergenic | 40.0% |
!! | GGAACCGTTTATTGGTTCAA+TGG | - | Chr4:18996283-18996302 | MsG0480019357.01.T01:CDS | 40.0% |
CCATGTATAATGCGAAAGGG+GGG | + | Chr4:18995815-18995834 | None:intergenic | 45.0% | |
GATGAGCTCAAAGAAACCGT+TGG | - | Chr4:18996706-18996725 | MsG0480019357.01.T01:CDS | 45.0% | |
GTCACAAGGAAGTCTCTTTG+TGG | - | Chr4:18996375-18996394 | MsG0480019357.01.T01:CDS | 45.0% | |
! | GGGTGACCATTCCTTTCTTT+TGG | - | Chr4:18996480-18996499 | MsG0480019357.01.T01:CDS | 45.0% |
! | GTAGTGTTTTGTGAGGATCG+TGG | - | Chr4:18996115-18996134 | MsG0480019357.01.T01:CDS | 45.0% |
CCCCCCTTTCGCATTATACA+TGG | - | Chr4:18995812-18995831 | MsG0480019357.01.T01:CDS | 50.0% | |
TTGTGAGGATCGTGGTCAAC+CGG | - | Chr4:18996123-18996142 | MsG0480019357.01.T01:CDS | 50.0% | |
TCGCCCAACTTAAACAGCCC+TGG | - | Chr4:18996331-18996350 | MsG0480019357.01.T01:CDS | 55.0% | |
AAAGGGGGGCGAAAGAGGAG+GGG | + | Chr4:18995801-18995820 | None:intergenic | 60.0% | |
ATGCGAAAGGGGGGCGAAAG+AGG | + | Chr4:18995806-18995825 | None:intergenic | 60.0% | |
GAAAGGGGGGCGAAAGAGGA+GGG | + | Chr4:18995802-18995821 | None:intergenic | 60.0% | |
AAGGGGGGCGAAAGAGGAGG+GGG | + | Chr4:18995800-18995819 | None:intergenic | 65.0% | |
CGAAAGGGGGGCGAAAGAGG+AGG | + | Chr4:18995803-18995822 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 18995665 | 18996759 | 18995665 | ID=MsG0480019357.01;Name=MsG0480019357.01 |
Chr4 | mRNA | 18995665 | 18996759 | 18995665 | ID=MsG0480019357.01.T01;Parent=MsG0480019357.01;Name=MsG0480019357.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|364 |
Chr4 | exon | 18995665 | 18996759 | 18995665 | ID=MsG0480019357.01.T01:exon:4113;Parent=MsG0480019357.01.T01 |
Chr4 | CDS | 18995665 | 18996759 | 18995665 | ID=MsG0480019357.01.T01:cds;Parent=MsG0480019357.01.T01 |
Gene Sequence |
Protein sequence |