Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023052.01.T01 | XP_003629719.2 | 92.969 | 384 | 26 | 1 | 1 | 383 | 1 | 384 | 0 | 741 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023052.01.T01 | Q1PEZ8 | 29.651 | 344 | 203 | 9 | 13 | 348 | 5 | 317 | 5.70E-35 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023052.01.T01 | G7LIM0 | 92.969 | 384 | 26 | 1 | 1 | 383 | 1 | 384 | 0.0 | 741 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049066.01 | MsG0480023052.01 | -0.802935 | 4.430731e-49 | 2.197974e-46 |
| MsG0180004491.01 | MsG0480023052.01 | 0.800590 | 1.341895e-48 | 6.272374e-46 |
| MsG0280011299.01 | MsG0480023052.01 | -0.812566 | 3.975872e-51 | 2.536460e-48 |
| MsG0380012281.01 | MsG0480023052.01 | -0.810963 | 8.874884e-51 | 5.425681e-48 |
| MsG0480018626.01 | MsG0480023052.01 | -0.809107 | 2.227743e-50 | 1.296507e-47 |
| MsG0480023052.01 | MsG0580024678.01 | -0.809513 | 1.823327e-50 | 1.072657e-47 |
| MsG0480023052.01 | MsG0580030019.01 | 0.815541 | 8.770385e-52 | 6.063926e-49 |
| MsG0480023052.01 | MsG0680030635.01 | -0.819658 | 1.034712e-52 | 8.011481e-50 |
| MsG0480023052.01 | MsG0780039593.01 | 0.813005 | 3.186418e-51 | 2.056508e-48 |
| MsG0480023052.01 | MsG0780039702.01 | 0.850394 | 1.747521e-60 | 3.418211e-57 |
| MsG0480023052.01 | MsG0880045804.01 | 0.801360 | 9.342242e-49 | 4.452806e-46 |
| MsG0480023052.01 | MsG0880045968.01 | -0.804464 | 2.133854e-49 | 1.100928e-46 |
| MsG0480023052.01 | MsG0880047493.01 | 0.821464 | 3.982585e-53 | 3.242290e-50 |
| MsG0380017579.01 | MsG0480023052.01 | 0.809761 | 1.612629e-50 | 9.550423e-48 |
| MsG0280010149.01 | MsG0480023052.01 | -0.807375 | 5.211813e-50 | 2.898158e-47 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023052.01.T01 | MTR_8g085760 | 92.969 | 384 | 26 | 1 | 1 | 383 | 1 | 384 | 0.0 | 741 |
| MsG0480023052.01.T01 | MTR_7g096720 | 52.658 | 395 | 156 | 10 | 4 | 382 | 2 | 381 | 1.02e-127 | 372 |
| MsG0480023052.01.T01 | MTR_4g088925 | 50.407 | 369 | 152 | 9 | 21 | 381 | 34 | 379 | 1.48e-105 | 316 |
| MsG0480023052.01.T01 | MTR_6g092570 | 42.051 | 390 | 168 | 15 | 6 | 379 | 1 | 348 | 3.89e-78 | 245 |
| MsG0480023052.01.T01 | MTR_5g079830 | 40.108 | 369 | 170 | 12 | 10 | 364 | 3 | 334 | 5.27e-67 | 217 |
| MsG0480023052.01.T01 | MTR_8g074610 | 34.615 | 390 | 204 | 14 | 9 | 374 | 21 | 383 | 4.64e-51 | 176 |
| MsG0480023052.01.T01 | MTR_2g041510 | 35.550 | 391 | 193 | 16 | 9 | 374 | 2 | 358 | 3.52e-50 | 173 |
| MsG0480023052.01.T01 | MTR_2g041510 | 35.550 | 391 | 193 | 16 | 9 | 374 | 22 | 378 | 4.51e-50 | 173 |
| MsG0480023052.01.T01 | MTR_8g074640 | 32.727 | 385 | 196 | 14 | 9 | 363 | 2 | 353 | 1.85e-46 | 163 |
| MsG0480023052.01.T01 | MTR_4g125090 | 35.843 | 332 | 152 | 12 | 5 | 330 | 37 | 313 | 8.05e-46 | 160 |
| MsG0480023052.01.T01 | MTR_7g096760 | 56.989 | 93 | 37 | 3 | 231 | 321 | 2 | 93 | 3.69e-24 | 97.1 |
| MsG0480023052.01.T01 | MTR_3g030050 | 23.937 | 447 | 219 | 19 | 9 | 375 | 12 | 417 | 3.33e-15 | 77.0 |
| MsG0480023052.01.T01 | MTR_3g058460 | 23.018 | 391 | 238 | 12 | 14 | 375 | 16 | 372 | 9.86e-15 | 75.5 |
| MsG0480023052.01.T01 | MTR_2g047180 | 25.063 | 395 | 230 | 16 | 12 | 375 | 3 | 362 | 2.05e-14 | 74.3 |
| MsG0480023052.01.T01 | MTR_1g026850 | 24.365 | 394 | 230 | 15 | 12 | 375 | 5 | 360 | 1.40e-13 | 71.6 |
| MsG0480023052.01.T01 | MTR_3g029620 | 23.741 | 417 | 218 | 19 | 11 | 375 | 1 | 369 | 1.77e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023052.01.T01 | AT2G26160 | 29.651 | 344 | 203 | 9 | 13 | 348 | 5 | 317 | 5.81e-36 | 134 |
| MsG0480023052.01.T01 | AT4G35733 | 27.749 | 382 | 228 | 9 | 14 | 380 | 7 | 355 | 1.95e-34 | 130 |
| MsG0480023052.01.T01 | AT1G44080 | 26.111 | 360 | 213 | 7 | 12 | 362 | 4 | 319 | 6.32e-30 | 118 |
| MsG0480023052.01.T01 | AT1G65770 | 27.907 | 387 | 193 | 14 | 11 | 363 | 1 | 335 | 1.59e-29 | 117 |
| MsG0480023052.01.T01 | AT1G65740 | 26.810 | 373 | 227 | 12 | 11 | 363 | 1 | 347 | 2.31e-25 | 106 |
| MsG0480023052.01.T01 | AT3G25750 | 26.724 | 348 | 213 | 12 | 12 | 349 | 4 | 319 | 2.58e-24 | 103 |
| MsG0480023052.01.T01 | AT3G25750 | 27.114 | 343 | 204 | 13 | 12 | 349 | 4 | 305 | 3.56e-24 | 102 |
| MsG0480023052.01.T01 | AT2G17030 | 25.414 | 362 | 202 | 12 | 11 | 337 | 1 | 329 | 7.00e-20 | 90.9 |
| MsG0480023052.01.T01 | AT1G57906 | 28.755 | 233 | 129 | 8 | 135 | 340 | 6 | 228 | 8.51e-13 | 67.8 |
Find 69 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTGCATGTTTGCAATAT+TGG | 0.191961 | 4:-80207223 | MsG0480023052.01.T01:CDS |
| CTTACAAATTATTTGATCAT+AGG | 0.236266 | 4:+80206653 | None:intergenic |
| CAAGGCCTATTGTTTCAATT+TGG | 0.239371 | 4:-80206732 | MsG0480023052.01.T01:CDS |
| GGGTGAAGCTTTGTTTGTTT+TGG | 0.247417 | 4:-80206834 | MsG0480023052.01.T01:CDS |
| ATCATCATCATCCATTATTA+TGG | 0.249406 | 4:+80207186 | None:intergenic |
| TATAACTAACCATAACTCTT+TGG | 0.271598 | 4:+80207738 | None:intergenic |
| TTGTTAGCTCAAGGCTATTA+TGG | 0.272989 | 4:-80206791 | MsG0480023052.01.T01:CDS |
| ACTTCAACTTCTTCTAATAA+AGG | 0.279908 | 4:-80207544 | MsG0480023052.01.T01:CDS |
| TTGATCAAGAATGGGGTAAA+TGG | 0.295549 | 4:-80206874 | MsG0480023052.01.T01:CDS |
| TGTAGAAAATATTTAAGATA+TGG | 0.319060 | 4:+80207616 | None:intergenic |
| GTAAGCCTGCCAACAGCTTT+TGG | 0.333990 | 4:-80206697 | MsG0480023052.01.T01:CDS |
| ATTCTCCAAATTGAAACAAT+AGG | 0.348900 | 4:+80206727 | None:intergenic |
| ATCATAGGGTTGAACAAAGT+TGG | 0.349987 | 4:+80206668 | None:intergenic |
| CTCCGGGGATGGATATGTCT+TGG | 0.358073 | 4:+80207456 | None:intergenic |
| TAAGAAAACAACCATAATAA+TGG | 0.362578 | 4:-80207197 | MsG0480023052.01.T01:CDS |
| CTTCAACTTCTTCTAATAAA+GGG | 0.370190 | 4:-80207543 | MsG0480023052.01.T01:CDS |
| TTTATAAGCTTGATCAAGAA+TGG | 0.373053 | 4:-80206883 | MsG0480023052.01.T01:CDS |
| TTTGATGAACTTTCGATTTG+TGG | 0.374755 | 4:-80207380 | MsG0480023052.01.T01:CDS |
| ATGGTTTGATGTGCCAGATC+TGG | 0.383540 | 4:-80206855 | MsG0480023052.01.T01:CDS |
| CAATCCTTTGACTTTGAAGT+TGG | 0.391090 | 4:-80207083 | MsG0480023052.01.T01:CDS |
| CAATACGGTATAGTTTAGTT+TGG | 0.394799 | 4:+80207593 | None:intergenic |
| GTGGCTCATAAAACTTGTTC+AGG | 0.397814 | 4:-80207521 | MsG0480023052.01.T01:CDS |
| ATAACTAACCATAACTCTTT+GGG | 0.402986 | 4:+80207739 | None:intergenic |
| TCCGGGGATGGATATGTCTT+GGG | 0.419316 | 4:+80207457 | None:intergenic |
| CAAAGTTGTACTGTTGTGAT+AGG | 0.419830 | 4:-80207048 | MsG0480023052.01.T01:CDS |
| TTTCAGTATGCACCGCTTAG+TGG | 0.421484 | 4:-80207301 | MsG0480023052.01.T01:CDS |
| ATAGGAATAAGCAGCACATA+TGG | 0.421633 | 4:-80207030 | MsG0480023052.01.T01:CDS |
| TAAATCTTCCCAAAGAGTTA+TGG | 0.424821 | 4:-80207747 | MsG0480023052.01.T01:CDS |
| TTATAAGCTTGATCAAGAAT+GGG | 0.444146 | 4:-80206882 | MsG0480023052.01.T01:CDS |
| GTTTCAATTTGGAGAATTCA+AGG | 0.444647 | 4:-80206721 | MsG0480023052.01.T01:CDS |
| CGATTTGTGGAGTTGTTTGA+AGG | 0.445651 | 4:-80207367 | MsG0480023052.01.T01:CDS |
| CATAATTTCTCTAGATATCA+AGG | 0.448445 | 4:-80207331 | MsG0480023052.01.T01:CDS |
| TTACAAATTATTTGATCATA+GGG | 0.449423 | 4:+80206654 | None:intergenic |
| CTATCACAACAGTACAACTT+TGG | 0.466620 | 4:+80207049 | None:intergenic |
| TCATAGGGTTGAACAAAGTT+GGG | 0.470111 | 4:+80206669 | None:intergenic |
| GACAAGTGGTGATGTGGTGC+TGG | 0.477374 | 4:+80207568 | None:intergenic |
| AACAAAGCTTCACCCAGATC+TGG | 0.480250 | 4:+80206842 | None:intergenic |
| AGGCCTTGCCTTTAGAAAAG+AGG | 0.480556 | 4:+80206747 | None:intergenic |
| CAAGGCCAAAAGCTGTTGGC+AGG | 0.480865 | 4:+80206692 | None:intergenic |
| ACGATGATATAATTCTTCAC+AGG | 0.485882 | 4:-80207150 | MsG0480023052.01.T01:CDS |
| AAGCAGTTAGTAGAATATGA+TGG | 0.489008 | 4:-80206986 | MsG0480023052.01.T01:CDS |
| CTTTATGTTGTGGATGAAGA+CGG | 0.513196 | 4:-80207121 | MsG0480023052.01.T01:CDS |
| CGAGGTGTATGAGAGGAAGA+AGG | 0.518354 | 4:+80207643 | None:intergenic |
| AACTTCTCATTGTTAGCTCA+AGG | 0.527852 | 4:-80206800 | MsG0480023052.01.T01:CDS |
| CAGGGAACAACTTTATGTTG+TGG | 0.530035 | 4:-80207131 | MsG0480023052.01.T01:CDS |
| GGATGATGATGATGTATACA+TGG | 0.546547 | 4:-80207176 | MsG0480023052.01.T01:CDS |
| TTTATGTTGTGGATGAAGAC+GGG | 0.547853 | 4:-80207120 | MsG0480023052.01.T01:CDS |
| TGGTTTGATGTGCCAGATCT+GGG | 0.557600 | 4:-80206854 | MsG0480023052.01.T01:CDS |
| TGAACCAACTTCAAAGTCAA+AGG | 0.569063 | 4:+80207079 | None:intergenic |
| AAGAAGTTGAAGTTGACAAG+TGG | 0.573346 | 4:+80207554 | None:intergenic |
| TCATAAGCAATATTTATACA+AGG | 0.574589 | 4:-80206921 | MsG0480023052.01.T01:CDS |
| CGATGATATAATTCTTCACA+GGG | 0.575649 | 4:-80207149 | MsG0480023052.01.T01:CDS |
| TAGGAATAAGCAGCACATAT+GGG | 0.577725 | 4:-80207029 | MsG0480023052.01.T01:CDS |
| TCCCAAGACATATCCATCCC+CGG | 0.579489 | 4:-80207458 | MsG0480023052.01.T01:CDS |
| TGGAATGCGAGGTGTATGAG+AGG | 0.599874 | 4:+80207636 | None:intergenic |
| CAACTTCTTCTAATAAAGGG+TGG | 0.603116 | 4:-80207540 | MsG0480023052.01.T01:CDS |
| TATAAGCTTGATCAAGAATG+GGG | 0.611541 | 4:-80206881 | MsG0480023052.01.T01:CDS |
| GAGGTGTATGAGAGGAAGAA+GGG | 0.614744 | 4:+80207644 | None:intergenic |
| TGGGCAAGGCCAAAAGCTGT+TGG | 0.617625 | 4:+80206688 | None:intergenic |
| TATTTAAGATATGGAATGCG+AGG | 0.626977 | 4:+80207625 | None:intergenic |
| GATGTGGTGCTGGTTCAATA+CGG | 0.633371 | 4:+80207578 | None:intergenic |
| GGGTTGAACAAAGTTGGGCA+AGG | 0.633410 | 4:+80206674 | None:intergenic |
| GAAGTTGACAAGTGGTGATG+TGG | 0.649377 | 4:+80207562 | None:intergenic |
| ATGATAACAAGATGGTGCAA+TGG | 0.658156 | 4:-80207771 | MsG0480023052.01.T01:CDS |
| TGTTATGTATGATAACAAGA+TGG | 0.674368 | 4:-80207779 | MsG0480023052.01.T01:CDS |
| GATGATGATGATGTATACAT+GGG | 0.676311 | 4:-80207175 | MsG0480023052.01.T01:CDS |
| ATAACTTTACAACCACTAAG+CGG | 0.718475 | 4:+80207289 | None:intergenic |
| ATATGATGGAAGTCTCTATG+TGG | 0.736365 | 4:-80206972 | MsG0480023052.01.T01:CDS |
| AATTTCTCTAGATATCAAGG+TGG | 0.780792 | 4:-80207328 | MsG0480023052.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTAGAAAATATTTAAGATA+TGG | + | Chr4:80206838-80206857 | None:intergenic | 15.0% |
| !! | TAAGAAAACAACCATAATAA+TGG | - | Chr4:80207254-80207273 | MsG0480023052.01.T01:CDS | 20.0% |
| !! | TCATAAGCAATATTTATACA+AGG | - | Chr4:80207530-80207549 | MsG0480023052.01.T01:CDS | 20.0% |
| !!! | TCATCAAATTCAATACTTTT+TGG | + | Chr4:80207059-80207078 | None:intergenic | 20.0% |
| ! | AAGATCAAAGAGAAAAAGTT+TGG | + | Chr4:80206968-80206987 | None:intergenic | 25.0% |
| ! | ACTTCAACTTCTTCTAATAA+AGG | - | Chr4:80206907-80206926 | MsG0480023052.01.T01:CDS | 25.0% |
| ! | ATAACTAACCATAACTCTTT+GGG | + | Chr4:80206715-80206734 | None:intergenic | 25.0% |
| ! | ATCATCATCATCCATTATTA+TGG | + | Chr4:80207268-80207287 | None:intergenic | 25.0% |
| ! | ATTCTCCAAATTGAAACAAT+AGG | + | Chr4:80207727-80207746 | None:intergenic | 25.0% |
| ! | CATAATTTCTCTAGATATCA+AGG | - | Chr4:80207120-80207139 | MsG0480023052.01.T01:CDS | 25.0% |
| ! | CTTCAACTTCTTCTAATAAA+GGG | - | Chr4:80206908-80206927 | MsG0480023052.01.T01:CDS | 25.0% |
| ! | TATAACTAACCATAACTCTT+TGG | + | Chr4:80206716-80206735 | None:intergenic | 25.0% |
| ! | TGTTATGTATGATAACAAGA+TGG | - | Chr4:80206672-80206691 | MsG0480023052.01.T01:CDS | 25.0% |
| ! | TTATAAGCTTGATCAAGAAT+GGG | - | Chr4:80207569-80207588 | MsG0480023052.01.T01:CDS | 25.0% |
| ! | TTTATAAGCTTGATCAAGAA+TGG | - | Chr4:80207568-80207587 | MsG0480023052.01.T01:CDS | 25.0% |
| AAAGTGCATGTTTGCAATAT+TGG | - | Chr4:80207228-80207247 | MsG0480023052.01.T01:CDS | 30.0% | |
| AAGCAGTTAGTAGAATATGA+TGG | - | Chr4:80207465-80207484 | MsG0480023052.01.T01:CDS | 30.0% | |
| AATTTCTCTAGATATCAAGG+TGG | - | Chr4:80207123-80207142 | MsG0480023052.01.T01:CDS | 30.0% | |
| ACGATGATATAATTCTTCAC+AGG | - | Chr4:80207301-80207320 | MsG0480023052.01.T01:CDS | 30.0% | |
| ATAACTTTACAACCACTAAG+CGG | + | Chr4:80207165-80207184 | None:intergenic | 30.0% | |
| ATCAAAGAGAAAAAGTTTGG+AGG | + | Chr4:80206965-80206984 | None:intergenic | 30.0% | |
| CAATACGGTATAGTTTAGTT+TGG | + | Chr4:80206861-80206880 | None:intergenic | 30.0% | |
| CGATGATATAATTCTTCACA+GGG | - | Chr4:80207302-80207321 | MsG0480023052.01.T01:CDS | 30.0% | |
| GTTTCAATTTGGAGAATTCA+AGG | - | Chr4:80207730-80207749 | MsG0480023052.01.T01:CDS | 30.0% | |
| TAAATCTTCCCAAAGAGTTA+TGG | - | Chr4:80206704-80206723 | MsG0480023052.01.T01:CDS | 30.0% | |
| TATAAGCTTGATCAAGAATG+GGG | - | Chr4:80207570-80207589 | MsG0480023052.01.T01:CDS | 30.0% | |
| ! | GATGATGATGATGTATACAT+GGG | - | Chr4:80207276-80207295 | MsG0480023052.01.T01:CDS | 30.0% |
| ! | TATTTAAGATATGGAATGCG+AGG | + | Chr4:80206829-80206848 | None:intergenic | 30.0% |
| ! | TGCATTTACCTCTTTTCTAA+AGG | - | Chr4:80207696-80207715 | MsG0480023052.01.T01:CDS | 30.0% |
| ! | TTTGATGAACTTTCGATTTG+TGG | - | Chr4:80207071-80207090 | MsG0480023052.01.T01:CDS | 30.0% |
| ! | TTTTTGGATAGTTTTCTCCT+GGG | + | Chr4:80207043-80207062 | None:intergenic | 30.0% |
| AACTTCTCATTGTTAGCTCA+AGG | - | Chr4:80207651-80207670 | MsG0480023052.01.T01:CDS | 35.0% | |
| AAGAAGTTGAAGTTGACAAG+TGG | + | Chr4:80206900-80206919 | None:intergenic | 35.0% | |
| ATAGGAATAAGCAGCACATA+TGG | - | Chr4:80207421-80207440 | MsG0480023052.01.T01:CDS | 35.0% | |
| ATCATAGGGTTGAACAAAGT+TGG | + | Chr4:80207786-80207805 | None:intergenic | 35.0% | |
| ATGATAACAAGATGGTGCAA+TGG | - | Chr4:80206680-80206699 | MsG0480023052.01.T01:CDS | 35.0% | |
| CAAAGTTGTACTGTTGTGAT+AGG | - | Chr4:80207403-80207422 | MsG0480023052.01.T01:CDS | 35.0% | |
| CAACTTCTTCTAATAAAGGG+TGG | - | Chr4:80206911-80206930 | MsG0480023052.01.T01:CDS | 35.0% | |
| CAAGGCCTATTGTTTCAATT+TGG | - | Chr4:80207719-80207738 | MsG0480023052.01.T01:CDS | 35.0% | |
| CTATCACAACAGTACAACTT+TGG | + | Chr4:80207405-80207424 | None:intergenic | 35.0% | |
| CTTTATGTTGTGGATGAAGA+CGG | - | Chr4:80207330-80207349 | MsG0480023052.01.T01:CDS | 35.0% | |
| TAGGAATAAGCAGCACATAT+GGG | - | Chr4:80207422-80207441 | MsG0480023052.01.T01:CDS | 35.0% | |
| TCATAGGGTTGAACAAAGTT+GGG | + | Chr4:80207785-80207804 | None:intergenic | 35.0% | |
| TGAACCAACTTCAAAGTCAA+AGG | + | Chr4:80207375-80207394 | None:intergenic | 35.0% | |
| TTGATCAAGAATGGGGTAAA+TGG | - | Chr4:80207577-80207596 | MsG0480023052.01.T01:CDS | 35.0% | |
| TTGTTAGCTCAAGGCTATTA+TGG | - | Chr4:80207660-80207679 | MsG0480023052.01.T01:CDS | 35.0% | |
| TTTATGTTGTGGATGAAGAC+GGG | - | Chr4:80207331-80207350 | MsG0480023052.01.T01:CDS | 35.0% | |
| ! | ATATGATGGAAGTCTCTATG+TGG | - | Chr4:80207479-80207498 | MsG0480023052.01.T01:CDS | 35.0% |
| ! | CTTTTTGGATAGTTTTCTCC+TGG | + | Chr4:80207044-80207063 | None:intergenic | 35.0% |
| ! | GGATGATGATGATGTATACA+TGG | - | Chr4:80207275-80207294 | MsG0480023052.01.T01:CDS | 35.0% |
| !! | CAATCCTTTGACTTTGAAGT+TGG | - | Chr4:80207368-80207387 | MsG0480023052.01.T01:CDS | 35.0% |
| !! | TTACCTCTTTTCTAAAGGCA+AGG | - | Chr4:80207701-80207720 | MsG0480023052.01.T01:CDS | 35.0% |
| !!! | GGTGAAGCTTTGTTTGTTTT+GGG | - | Chr4:80207618-80207637 | MsG0480023052.01.T01:CDS | 35.0% |
| CAGGGAACAACTTTATGTTG+TGG | - | Chr4:80207320-80207339 | MsG0480023052.01.T01:CDS | 40.0% | |
| CGATTTGTGGAGTTGTTTGA+AGG | - | Chr4:80207084-80207103 | MsG0480023052.01.T01:CDS | 40.0% | |
| ! | ATGAAGACGGGACAATTTTC+TGG | - | Chr4:80207343-80207362 | MsG0480023052.01.T01:CDS | 40.0% |
| ! | GTGGCTCATAAAACTTGTTC+AGG | - | Chr4:80206930-80206949 | MsG0480023052.01.T01:CDS | 40.0% |
| ! | TCTCCTGGGATGATACTTTT+TGG | + | Chr4:80207029-80207048 | None:intergenic | 40.0% |
| !! | CTCCTGGGATGATACTTTTT+GGG | + | Chr4:80207028-80207047 | None:intergenic | 40.0% |
| !!! | ACTTTTTGGGTGGTTTTCTC+CGG | + | Chr4:80207015-80207034 | None:intergenic | 40.0% |
| !!! | GGGTGAAGCTTTGTTTGTTT+TGG | - | Chr4:80207617-80207636 | MsG0480023052.01.T01:CDS | 40.0% |
| AACAAAGCTTCACCCAGATC+TGG | + | Chr4:80207612-80207631 | None:intergenic | 45.0% | |
| ATGGTTTGATGTGCCAGATC+TGG | - | Chr4:80207596-80207615 | MsG0480023052.01.T01:CDS | 45.0% | |
| GAGGTGTATGAGAGGAAGAA+GGG | + | Chr4:80206810-80206829 | None:intergenic | 45.0% | |
| TGGTTTGATGTGCCAGATCT+GGG | - | Chr4:80207597-80207616 | MsG0480023052.01.T01:CDS | 45.0% | |
| TTTCAGTATGCACCGCTTAG+TGG | - | Chr4:80207150-80207169 | MsG0480023052.01.T01:CDS | 45.0% | |
| ! | AGGCCTTGCCTTTAGAAAAG+AGG | + | Chr4:80207707-80207726 | None:intergenic | 45.0% |
| ! | GAAGTTGACAAGTGGTGATG+TGG | + | Chr4:80206892-80206911 | None:intergenic | 45.0% |
| !! | CACCCAAAAAGTATCATCCC+AGG | - | Chr4:80207023-80207042 | MsG0480023052.01.T01:CDS | 45.0% |
| !! | CTGGGATGATACTTTTTGGG+TGG | + | Chr4:80207025-80207044 | None:intergenic | 45.0% |
| !! | GATGTGGTGCTGGTTCAATA+CGG | + | Chr4:80206876-80206895 | None:intergenic | 45.0% |
| !!! | CTTTTTGGGTGGTTTTCTCC+GGG | + | Chr4:80207014-80207033 | None:intergenic | 45.0% |
| !!! | TTTTTGGGTGGTTTTCTCCG+GGG | + | Chr4:80207013-80207032 | None:intergenic | 45.0% |
| CGAGGTGTATGAGAGGAAGA+AGG | + | Chr4:80206811-80206830 | None:intergenic | 50.0% | |
| GGGTTGAACAAAGTTGGGCA+AGG | + | Chr4:80207780-80207799 | None:intergenic | 50.0% | |
| TCCCAAGACATATCCATCCC+CGG | - | Chr4:80206993-80207012 | MsG0480023052.01.T01:CDS | 50.0% | |
| TCCGGGGATGGATATGTCTT+GGG | + | Chr4:80206997-80207016 | None:intergenic | 50.0% | |
| TGGAATGCGAGGTGTATGAG+AGG | + | Chr4:80206818-80206837 | None:intergenic | 50.0% | |
| ! | GTAAGCCTGCCAACAGCTTT+TGG | - | Chr4:80207754-80207773 | MsG0480023052.01.T01:CDS | 50.0% |
| CAAGGCCAAAAGCTGTTGGC+AGG | + | Chr4:80207762-80207781 | None:intergenic | 55.0% | |
| CTCCGGGGATGGATATGTCT+TGG | + | Chr4:80206998-80207017 | None:intergenic | 55.0% | |
| TGGGCAAGGCCAAAAGCTGT+TGG | + | Chr4:80207766-80207785 | None:intergenic | 55.0% | |
| ! | GACAAGTGGTGATGTGGTGC+TGG | + | Chr4:80206886-80206905 | None:intergenic | 55.0% |
| ! | TGGGTGGTTTTCTCCGGGGA+TGG | + | Chr4:80207009-80207028 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 80206661 | 80207812 | 80206661 | ID=MsG0480023052.01;Name=MsG0480023052.01 |
| Chr4 | mRNA | 80206661 | 80207812 | 80206661 | ID=MsG0480023052.01.T01;Parent=MsG0480023052.01;Name=MsG0480023052.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|383 |
| Chr4 | exon | 80206661 | 80207812 | 80206661 | ID=MsG0480023052.01.T01:exon:6235;Parent=MsG0480023052.01.T01 |
| Chr4 | CDS | 80206661 | 80207812 | 80206661 | ID=MsG0480023052.01.T01:cds;Parent=MsG0480023052.01.T01 |
| Gene Sequence |
| Protein sequence |
