AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019399.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019399.01.T01 MTR_4g030890 94.960 377 14 3 1 376 43 415 0.0 702
MsG0480019399.01.T01 MTR_4g031140 81.089 349 60 2 28 376 1 343 0.0 570
MsG0480019399.01.T01 MTR_3g094650 45.538 325 161 5 38 357 9 322 1.90e-97 293
MsG0480019399.01.T01 MTR_3g072190 45.938 320 163 3 41 357 6 318 9.99e-96 288
MsG0480019399.01.T01 MTR_5g021060 47.841 301 153 3 61 357 30 330 7.10e-95 286
MsG0480019399.01.T01 MTR_7g093370 42.651 347 184 5 18 358 35 372 1.29e-94 287
MsG0480019399.01.T01 MTR_8g076820 47.195 303 156 3 59 357 28 330 4.49e-94 285
MsG0480019399.01.T01 MTR_2g040000 46.201 329 165 5 38 358 8 332 1.28e-92 281
MsG0480019399.01.T01 MTR_2g029740 45.307 309 164 3 56 359 24 332 2.49e-91 278
MsG0480019399.01.T01 MTR_3g466200 44.828 319 163 5 45 357 9 320 6.76e-91 276
MsG0480019399.01.T01 MTR_2g029800 44.984 309 165 3 56 359 24 332 2.02e-90 276
MsG0480019399.01.T01 MTR_2g084010 45.122 328 162 5 34 357 5 318 6.45e-90 273
MsG0480019399.01.T01 MTR_5g074860 46.296 324 157 7 42 356 9 324 8.15e-90 273
MsG0480019399.01.T01 MTR_5g074760 44.753 324 165 5 41 357 5 321 1.26e-89 273
MsG0480019399.01.T01 MTR_5g083860 43.692 325 171 4 38 357 8 325 1.56e-89 273
MsG0480019399.01.T01 MTR_1g101830 44.785 326 168 5 33 357 8 322 4.20e-89 271
MsG0480019399.01.T01 MTR_2g084080 44.860 321 166 4 40 357 5 317 4.50e-89 271
MsG0480019399.01.T01 MTR_5g074970 44.343 327 165 6 38 357 10 326 1.54e-88 270
MsG0480019399.01.T01 MTR_2g029750 44.013 309 168 3 56 359 24 332 1.62e-88 271
MsG0480019399.01.T01 MTR_5g074740 45.031 322 163 5 43 357 7 321 1.66e-88 270
MsG0480019399.01.T01 MTR_2g028980 42.988 328 181 4 37 359 6 332 2.49e-88 271
MsG0480019399.01.T01 MTR_4g125940 43.344 323 174 4 43 358 10 330 2.81e-88 270
MsG0480019399.01.T01 MTR_3g094670 43.865 326 161 4 42 357 9 322 2.95e-88 269
MsG0480019399.01.T01 MTR_4g083710 44.000 325 168 6 41 357 6 324 4.85e-88 269
MsG0480019399.01.T01 MTR_2g084000 43.750 320 169 4 42 357 7 319 4.93e-88 269
MsG0480019399.01.T01 MTR_1g022970 47.020 302 155 3 61 357 46 347 8.47e-88 269
MsG0480019399.01.T01 MTR_2g084020 43.902 328 166 5 34 357 5 318 1.29e-87 268
MsG0480019399.01.T01 MTR_3g094630 44.648 327 169 4 36 357 3 322 1.82e-87 267
MsG0480019399.01.T01 MTR_4g122640 43.648 307 167 4 55 357 32 336 6.44e-87 266
MsG0480019399.01.T01 MTR_4g029170 45.062 324 163 6 39 357 8 321 1.15e-86 265
MsG0480019399.01.T01 MTR_2g084110 45.484 310 157 5 52 357 16 317 6.75e-86 263
MsG0480019399.01.T01 MTR_2g084090 41.846 325 177 5 38 357 1 318 5.11e-85 261
MsG0480019399.01.T01 MTR_2g029815 40.606 330 189 4 35 359 5 332 5.78e-85 262
MsG0480019399.01.T01 MTR_3g466180 45.171 321 163 4 40 357 13 323 6.04e-85 261
MsG0480019399.01.T01 MTR_7g026990 42.320 319 174 3 43 358 12 323 8.36e-85 261
MsG0480019399.01.T01 MTR_4g029180 47.315 298 145 5 65 357 31 321 1.09e-84 260
MsG0480019399.01.T01 MTR_5g017850 43.396 318 175 3 44 357 10 326 2.99e-84 259
MsG0480019399.01.T01 MTR_1g054205 41.401 314 178 4 51 358 14 327 6.49e-84 258
MsG0480019399.01.T01 MTR_5g014100 44.479 317 163 5 52 357 17 331 7.35e-84 258
MsG0480019399.01.T01 MTR_5g049280 42.136 337 177 6 39 358 3 338 7.36e-84 259
MsG0480019399.01.T01 MTR_2g029820 42.395 309 173 3 56 359 24 332 1.41e-83 258
MsG0480019399.01.T01 MTR_5g074710 43.302 321 168 5 44 357 8 321 2.64e-83 257
MsG0480019399.01.T01 MTR_2g029910 43.506 308 168 4 56 357 25 332 2.95e-83 258
MsG0480019399.01.T01 MTR_4g029200 41.071 336 173 4 40 357 10 338 5.16e-83 256
MsG0480019399.01.T01 MTR_2g029560 41.667 312 177 3 52 358 15 326 1.47e-82 255
MsG0480019399.01.T01 MTR_5g017860 41.824 318 180 3 44 357 10 326 1.94e-82 254
MsG0480019399.01.T01 MTR_4g074995 42.633 319 157 6 46 357 9 308 2.94e-82 253
MsG0480019399.01.T01 MTR_2g029860 40.798 326 186 4 39 359 9 332 8.87e-82 254
MsG0480019399.01.T01 MTR_3g467600 42.415 323 171 6 43 357 9 324 9.36e-82 253
MsG0480019399.01.T01 MTR_7g072510 42.154 325 166 4 36 357 7 312 1.51e-81 252
MsG0480019399.01.T01 MTR_2g029830 41.883 308 174 3 56 358 23 330 6.30e-81 252
MsG0480019399.01.T01 MTR_2g029850 42.532 308 172 3 56 358 24 331 2.37e-80 250
MsG0480019399.01.T01 MTR_1g115900 40.979 327 179 5 43 363 9 327 2.98e-80 249
MsG0480019399.01.T01 MTR_1g025980 40.764 314 182 4 44 356 7 317 3.57e-80 248
MsG0480019399.01.T01 MTR_4g074990 41.284 327 160 6 37 357 5 305 1.92e-79 246
MsG0480019399.01.T01 MTR_7g072480 42.508 327 173 4 34 357 2 316 3.11e-79 246
MsG0480019399.01.T01 MTR_4g125940 45.290 276 142 4 90 358 2 275 4.12e-79 244
MsG0480019399.01.T01 MTR_3g072190 48.249 257 123 3 104 357 2 251 6.62e-79 243
MsG0480019399.01.T01 MTR_2g029730 41.667 312 177 3 52 358 16 327 1.36e-78 245
MsG0480019399.01.T01 MTR_4g029190 40.176 341 175 6 39 357 7 340 1.82e-78 245
MsG0480019399.01.T01 MTR_4g046713 39.812 319 187 4 43 357 9 326 5.07e-78 243
MsG0480019399.01.T01 MTR_8g075100 41.118 304 172 5 56 357 21 319 1.86e-77 241
MsG0480019399.01.T01 MTR_3g092990 39.688 320 189 3 43 358 8 327 4.07e-77 241
MsG0480019399.01.T01 MTR_5g022870 40.694 317 181 5 44 357 4 316 7.28e-77 240
MsG0480019399.01.T01 MTR_1g077000 40.184 326 179 6 38 357 12 327 1.49e-75 237
MsG0480019399.01.T01 MTR_0155s0040 38.509 322 186 5 38 357 4 315 4.70e-75 235
MsG0480019399.01.T01 MTR_7g086820 40.789 304 170 6 59 359 18 314 2.59e-74 233
MsG0480019399.01.T01 MTR_4g087965 39.883 341 173 10 37 353 10 342 3.01e-73 232
MsG0480019399.01.T01 MTR_1g009750 37.963 324 191 6 43 357 6 328 6.95e-73 230
MsG0480019399.01.T01 MTR_2g088770 39.557 316 184 6 47 357 12 325 5.07e-72 228
MsG0480019399.01.T01 MTR_7g107520 39.344 305 178 5 56 357 20 320 4.39e-71 225
MsG0480019399.01.T01 MTR_7g029030 38.769 325 185 6 37 357 6 320 8.56e-71 224
MsG0480019399.01.T01 MTR_1g086320 40.854 328 186 6 37 357 7 333 2.08e-69 221
MsG0480019399.01.T01 MTR_4g074980 39.048 315 160 7 46 357 9 294 2.09e-69 220
MsG0480019399.01.T01 MTR_7g086870 37.540 309 168 6 59 358 20 312 6.48e-69 219
MsG0480019399.01.T01 MTR_4g133800 40.604 298 165 7 64 357 44 333 8.54e-69 220
MsG0480019399.01.T01 MTR_5g074860 39.815 324 139 7 42 356 9 285 3.89e-68 216
MsG0480019399.01.T01 MTR_5g016010 35.077 325 205 4 38 356 4 328 1.16e-67 217
MsG0480019399.01.T01 MTR_1g086490 40.549 328 181 5 44 357 13 340 1.60e-67 217
MsG0480019399.01.T01 MTR_4g074980 43.825 251 130 4 46 291 9 253 2.76e-67 213
MsG0480019399.01.T01 MTR_3g092990 37.812 320 184 4 43 358 8 316 4.44e-67 215
MsG0480019399.01.T01 MTR_1g038680 41.528 301 169 6 64 357 32 332 4.82e-66 213
MsG0480019399.01.T01 MTR_4g031040 63.793 174 20 2 120 293 1 131 1.06e-65 205
MsG0480019399.01.T01 MTR_2g008710 37.423 326 187 8 40 357 9 325 2.39e-65 211
MsG0480019399.01.T01 MTR_2g437770 39.262 298 168 7 65 358 54 342 4.17e-65 211
MsG0480019399.01.T01 MTR_5g033470 38.730 315 179 7 54 357 66 377 6.10e-65 211
MsG0480019399.01.T01 MTR_4g132490 35.017 297 187 3 65 357 33 327 2.19e-64 208
MsG0480019399.01.T01 MTR_0286s0010 37.423 326 188 8 40 357 17 334 2.35e-64 208
MsG0480019399.01.T01 MTR_6g008075 37.423 326 188 8 40 357 17 334 2.35e-64 208
MsG0480019399.01.T01 MTR_8g062780 37.117 326 197 5 37 357 2 324 2.58e-64 208
MsG0480019399.01.T01 MTR_4g114210 37.805 328 186 7 40 357 1 320 2.90e-64 207
MsG0480019399.01.T01 MTR_6g043280 39.130 299 169 7 65 359 45 334 3.07e-64 208
MsG0480019399.01.T01 MTR_1g090760 36.250 320 198 5 44 357 11 330 7.98e-63 204
MsG0480019399.01.T01 MTR_6g043460 36.061 330 190 8 42 359 10 330 8.36e-63 205
MsG0480019399.01.T01 MTR_2g029830 40.856 257 147 3 107 358 6 262 2.89e-62 201
MsG0480019399.01.T01 MTR_6g027440 36.076 316 195 4 44 357 4 314 5.76e-62 202
MsG0480019399.01.T01 MTR_1g009750 35.404 322 185 7 43 357 6 311 1.44e-61 200
MsG0480019399.01.T01 MTR_6g043240 36.023 347 194 9 34 364 4 338 1.60e-61 201
MsG0480019399.01.T01 MTR_2g067440 36.228 334 177 6 59 358 58 389 1.49e-59 197
MsG0480019399.01.T01 MTR_4g127670 36.824 296 178 5 64 353 27 319 2.58e-59 195
MsG0480019399.01.T01 MTR_4g095450 33.127 323 205 5 40 356 6 323 7.05e-59 194
MsG0480019399.01.T01 MTR_1g066380 34.967 306 187 4 59 358 25 324 1.48e-58 193
MsG0480019399.01.T01 MTR_1g066640 34.967 306 187 4 59 358 25 324 3.47e-58 192
MsG0480019399.01.T01 MTR_1g066710 34.967 306 187 5 59 358 25 324 6.87e-58 191
MsG0480019399.01.T01 MTR_2g099175 33.535 331 206 7 36 357 10 335 2.11e-57 190
MsG0480019399.01.T01 MTR_2g077990 36.012 336 178 7 59 358 74 408 2.20e-56 190
MsG0480019399.01.T01 MTR_2g078610 35.714 336 179 7 59 358 74 408 1.22e-55 188
MsG0480019399.01.T01 MTR_1g066680 35.065 308 183 6 59 358 25 323 1.77e-55 185
MsG0480019399.01.T01 MTR_4g132110 32.727 330 205 6 41 359 7 330 1.90e-55 185
MsG0480019399.01.T01 MTR_2g078280 35.759 316 169 5 59 341 74 388 1.91e-54 184
MsG0480019399.01.T01 MTR_2g008160 37.097 310 182 7 56 357 19 323 4.39e-54 181
MsG0480019399.01.T01 MTR_4g132110 32.239 335 205 7 41 359 7 335 3.49e-53 179
MsG0480019399.01.T01 MTR_2g067450 35.127 316 177 10 59 358 9 312 1.04e-48 167
MsG0480019399.01.T01 MTR_2g008730 33.232 328 177 8 38 357 8 301 1.10e-48 167
MsG0480019399.01.T01 MTR_3g105790 33.333 327 200 9 39 357 6 322 6.79e-47 162
MsG0480019399.01.T01 MTR_1g066380 34.231 260 159 4 105 358 3 256 7.69e-45 155
MsG0480019399.01.T01 MTR_3g072210 44.503 191 94 4 172 357 55 238 8.90e-43 149
MsG0480019399.01.T01 MTR_0147s0010 31.034 319 183 6 61 356 77 381 5.53e-42 151
MsG0480019399.01.T01 MTR_5g074700 40.611 229 112 6 134 357 5 214 6.77e-42 146
MsG0480019399.01.T01 MTR_2g008160 33.333 309 158 7 57 357 20 288 1.10e-41 148
MsG0480019399.01.T01 MTR_2g008160 42.529 174 96 3 57 230 20 189 1.47e-39 140
MsG0480019399.01.T01 MTR_7g072490 38.034 234 85 5 107 340 2 175 3.05e-38 136
MsG0480019399.01.T01 MTR_3g072260 49.219 128 65 0 41 168 6 133 1.07e-37 133
MsG0480019399.01.T01 MTR_2g029880 38.021 192 102 4 173 358 9 189 8.46e-35 127
MsG0480019399.01.T01 MTR_3g105790 32.479 234 147 6 132 357 16 246 5.89e-29 113
MsG0480019399.01.T01 MTR_2g077980 30.961 281 144 9 123 358 11 286 5.00e-25 103
MsG0480019399.01.T01 MTR_7g086790 34.031 191 105 4 108 298 17 186 1.39e-24 99.8
MsG0480019399.01.T01 MTR_2g078560 29.730 222 122 4 166 353 95 316 5.30e-20 90.1
MsG0480019399.01.T01 MTR_3g462850 38.462 143 78 5 225 358 9 150 6.68e-20 85.9
MsG0480019399.01.T01 MTR_6g048160 54.930 71 28 2 100 170 22 88 1.34e-19 83.2
MsG0480019399.01.T01 MTR_5g058120 33.742 163 94 4 194 353 4 155 2.10e-19 87.0
MsG0480019399.01.T01 MTR_7g086810 34.307 137 63 3 61 197 6 115 7.64e-18 82.4
MsG0480019399.01.T01 MTR_4g114220 45.238 84 36 2 87 170 29 102 1.60e-16 76.3
MsG0480019399.01.T01 MTR_1g089005 36.441 118 68 2 61 172 15 131 5.62e-16 75.1
MsG0480019399.01.T01 MTR_1g098320 47.436 78 39 1 282 357 47 124 1.03e-15 73.9
MsG0480019399.01.T01 MTR_5g022510 28.436 211 104 4 135 341 50 217 1.40e-14 73.6
MsG0480019399.01.T01 MTR_5g022510 28.910 211 103 5 135 341 75 242 1.91e-14 73.6
MsG0480019399.01.T01 MTR_3g107060 31.707 164 96 5 72 231 87 238 9.61e-13 68.9
MsG0480019399.01.T01 MTR_4g012865 41.096 73 34 1 61 124 77 149 3.80e-12 63.9
MsG0480019399.01.T01 MTR_2g029930 36.364 99 38 2 57 144 15 99 5.80e-12 62.4
MsG0480019399.01.T01 MTR_7g086785 44.444 72 39 1 107 178 4 74 6.72e-12 63.2
MsG0480019399.01.T01 MTR_5g074770 37.363 91 53 2 270 356 18 108 2.40e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019399.01.T01 AT2G22420 73.171 328 87 1 38 365 1 327 0.0 511
MsG0480019399.01.T01 AT5G19890 47.962 319 157 4 44 357 13 327 1.76e-99 298
MsG0480019399.01.T01 AT2G18150 45.427 328 169 4 40 357 9 336 2.57e-98 296
MsG0480019399.01.T01 AT4G36430 45.912 318 168 3 45 358 14 331 4.02e-97 292
MsG0480019399.01.T01 AT5G06730 45.201 323 168 4 46 359 14 336 1.16e-96 292
MsG0480019399.01.T01 AT5G06720 46.440 323 164 4 45 358 12 334 1.34e-96 291
MsG0480019399.01.T01 AT5G66390 46.753 308 160 3 57 360 29 336 1.86e-94 286
MsG0480019399.01.T01 AT2G18140 45.260 327 170 4 40 357 9 335 4.77e-93 282
MsG0480019399.01.T01 AT3G50990 43.750 320 176 3 42 357 22 341 9.04e-92 279
MsG0480019399.01.T01 AT4G16270 47.475 297 152 4 64 357 53 348 1.50e-91 279
MsG0480019399.01.T01 AT2G38390 45.570 316 166 4 50 359 20 335 6.97e-91 277
MsG0480019399.01.T01 AT1G44970 42.941 340 175 4 37 357 7 346 1.41e-90 276
MsG0480019399.01.T01 AT2G38380 45.570 316 166 4 50 359 20 335 2.49e-89 273
MsG0480019399.01.T01 AT4G08770 45.397 315 165 4 52 359 15 329 8.04e-89 271
MsG0480019399.01.T01 AT4G08780 44.872 312 165 4 55 359 18 329 4.12e-88 270
MsG0480019399.01.T01 AT3G32980 45.886 316 164 4 50 358 20 335 1.86e-87 268
MsG0480019399.01.T01 AT5G58400 44.272 323 164 6 41 357 13 325 3.31e-87 267
MsG0480019399.01.T01 AT5G05340 44.262 305 156 4 59 357 28 324 4.29e-87 266
MsG0480019399.01.T01 AT3G49120 43.385 325 177 4 41 358 12 336 1.14e-86 266
MsG0480019399.01.T01 AT3G49110 43.385 325 177 4 41 358 13 337 7.33e-86 264
MsG0480019399.01.T01 AT1G14540 43.478 322 171 5 40 357 1 315 1.23e-85 262
MsG0480019399.01.T01 AT5G19880 44.860 321 169 5 45 357 9 329 1.48e-83 258
MsG0480019399.01.T01 AT5G58390 42.857 322 171 5 42 357 2 316 1.33e-81 252
MsG0480019399.01.T01 AT2G35380 44.136 324 168 6 47 357 12 335 2.23e-81 252
MsG0480019399.01.T01 AT1G49570 44.040 302 163 4 58 353 45 346 3.27e-81 252
MsG0480019399.01.T01 AT5G17820 42.056 321 165 7 40 357 11 313 8.84e-81 250
MsG0480019399.01.T01 AT1G14550 41.562 320 176 5 43 357 8 321 1.77e-80 249
MsG0480019399.01.T01 AT5G51890 41.195 318 183 3 42 357 7 322 2.84e-80 249
MsG0480019399.01.T01 AT5G17820 42.056 321 165 7 40 357 64 366 8.19e-80 249
MsG0480019399.01.T01 AT4G33420 42.042 333 181 5 27 357 3 325 1.37e-79 247
MsG0480019399.01.T01 AT4G33420 42.042 333 181 5 27 357 50 372 3.16e-79 248
MsG0480019399.01.T01 AT5G42180 41.667 312 178 4 46 356 8 316 3.66e-79 246
MsG0480019399.01.T01 AT1G68850 39.403 335 182 6 41 357 4 335 1.93e-78 244
MsG0480019399.01.T01 AT3G03670 38.650 326 182 5 39 357 7 321 8.66e-76 237
MsG0480019399.01.T01 AT1G71695 42.951 305 161 6 61 359 44 341 8.80e-75 236
MsG0480019399.01.T01 AT3G49960 38.037 326 194 5 38 357 6 329 4.45e-74 233
MsG0480019399.01.T01 AT5G64120 37.349 332 191 7 37 357 3 328 7.62e-72 228
MsG0480019399.01.T01 AT4G11290 40.557 323 181 7 42 357 8 326 1.20e-71 227
MsG0480019399.01.T01 AT5G15180 41.159 328 179 8 38 357 8 329 4.39e-71 226
MsG0480019399.01.T01 AT4G37530 38.762 307 182 4 57 357 23 329 2.59e-70 224
MsG0480019399.01.T01 AT3G01190 41.270 315 170 8 50 357 15 321 1.76e-69 221
MsG0480019399.01.T01 AT4G37520 37.049 305 186 4 59 357 25 329 6.06e-69 220
MsG0480019399.01.T01 AT5G39580 39.062 320 182 8 42 357 9 319 7.10e-69 219
MsG0480019399.01.T01 AT5G67400 36.000 325 202 4 39 357 5 329 1.50e-68 219
MsG0480019399.01.T01 AT2G41480 38.532 327 180 7 43 357 11 328 1.04e-67 217
MsG0480019399.01.T01 AT1G05260 37.730 326 190 7 38 358 9 326 1.19e-67 217
MsG0480019399.01.T01 AT4G30170 37.097 310 177 6 58 357 24 325 3.45e-67 215
MsG0480019399.01.T01 AT2G34060 39.349 338 181 10 38 355 11 344 1.23e-66 214
MsG0480019399.01.T01 AT2G18980 36.280 328 185 5 43 357 7 323 1.62e-66 214
MsG0480019399.01.T01 AT4G37520 36.393 305 185 5 59 357 25 326 4.03e-66 213
MsG0480019399.01.T01 AT3G28200 38.636 308 176 5 56 357 16 316 1.11e-65 211
MsG0480019399.01.T01 AT5G40150 38.436 307 179 4 56 357 27 328 4.93e-65 210
MsG0480019399.01.T01 AT1G05240 39.799 299 171 6 65 357 30 325 6.88e-65 209
MsG0480019399.01.T01 AT1G05250 39.799 299 171 6 65 357 30 325 6.88e-65 209
MsG0480019399.01.T01 AT1G77100 38.138 333 176 10 38 357 4 319 2.66e-64 208
MsG0480019399.01.T01 AT3G21770 37.267 322 179 6 50 358 18 329 8.33e-64 207
MsG0480019399.01.T01 AT4G26010 38.226 327 179 8 35 357 2 309 1.52e-63 206
MsG0480019399.01.T01 AT4G26010 38.226 327 179 8 35 357 30 337 2.25e-63 206
MsG0480019399.01.T01 AT1G24110 35.404 322 195 7 46 357 4 322 4.17e-62 202
MsG0480019399.01.T01 AT4G21960 33.232 328 203 5 40 357 6 327 9.05e-62 201
MsG0480019399.01.T01 AT4G25980 37.864 309 180 6 57 357 22 326 1.02e-61 201
MsG0480019399.01.T01 AT2G39040 38.961 308 174 9 61 357 46 350 2.29e-61 201
MsG0480019399.01.T01 AT5G14130 32.938 337 196 6 35 357 10 330 3.64e-61 200
MsG0480019399.01.T01 AT5G14130 32.938 337 196 6 35 357 51 371 9.13e-61 200
MsG0480019399.01.T01 AT5G64110 36.254 331 199 6 33 357 6 330 1.12e-60 199
MsG0480019399.01.T01 AT3G17070 35.562 329 199 5 39 357 14 339 3.00e-60 198
MsG0480019399.01.T01 AT4G17690 37.299 311 183 6 53 357 18 322 3.18e-60 197
MsG0480019399.01.T01 AT4G37530 40.385 260 151 3 57 312 23 282 3.23e-60 196
MsG0480019399.01.T01 AT5G64100 34.718 337 188 9 40 357 8 331 9.16e-60 196
MsG0480019399.01.T01 AT1G30870 37.542 301 174 7 65 359 55 347 7.90e-59 194
MsG0480019399.01.T01 AT4G33870 32.603 365 201 5 27 353 40 397 2.95e-58 194
MsG0480019399.01.T01 AT5G22410 38.111 307 165 8 61 354 28 322 4.33e-58 192
MsG0480019399.01.T01 AT5G47000 34.568 324 199 6 40 357 14 330 1.57e-57 191
MsG0480019399.01.T01 AT1G34510 35.542 332 181 9 35 357 2 309 3.43e-57 189
MsG0480019399.01.T01 AT2G37130 34.202 307 189 6 58 357 27 327 2.52e-56 187
MsG0480019399.01.T01 AT2G37130 34.667 300 183 6 65 357 3 296 3.14e-56 186
MsG0480019399.01.T01 AT2G35380 43.725 247 130 5 120 357 1 247 7.15e-56 184
MsG0480019399.01.T01 AT2G24800 36.066 305 185 5 59 357 29 329 2.38e-55 185
MsG0480019399.01.T01 AT4G31760 34.862 327 194 8 39 357 11 326 6.50e-54 181
MsG0480019399.01.T01 AT2G43480 34.385 317 190 8 52 357 26 335 1.15e-51 176
MsG0480019399.01.T01 AT5G24070 34.000 300 184 6 67 358 43 336 8.56e-50 171
MsG0480019399.01.T01 AT3G17070 35.075 268 162 5 98 357 13 276 1.17e-44 155
MsG0480019399.01.T01 AT5G39580 39.594 197 111 4 42 238 9 197 1.77e-40 143
MsG0480019399.01.T01 AT4G25980 42.442 172 95 3 57 228 67 234 5.69e-38 138
MsG0480019399.01.T01 AT2G24800 38.596 171 101 2 59 229 29 195 1.52e-30 117
MsG0480019399.01.T01 AT1G77490 31.795 195 106 6 154 341 165 339 7.85e-18 85.1
MsG0480019399.01.T01 AT1G77490 31.795 195 106 6 154 341 165 339 8.47e-18 84.7
MsG0480019399.01.T01 AT4G32320 27.985 268 140 9 76 338 100 319 1.18e-16 80.5
MsG0480019399.01.T01 AT3G42570 40.000 95 56 1 133 226 53 147 2.23e-15 73.2
MsG0480019399.01.T01 AT4G08390 27.477 222 127 7 128 341 165 360 5.09e-14 73.2
MsG0480019399.01.T01 AT4G08390 27.477 222 127 7 128 341 165 360 5.09e-14 73.2
MsG0480019399.01.T01 AT4G08390 27.477 222 127 7 128 341 165 360 5.09e-14 73.2
MsG0480019399.01.T01 AT4G08390 27.477 222 127 7 128 341 164 359 5.55e-14 73.2

Find 87 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGACAATGGTTTCAGCTTT+TGG 0.140468 4:-19598012 None:intergenic
CTGTGCTGATATTATAATTA+TGG 0.176916 4:+19598746 MsG0480019399.01.T01:CDS
CAACCAAGTCCTTGAAATAT+TGG 0.258540 4:-19599604 None:intergenic
TGTTGAAGGGATGTTGAAAA+TGG 0.280353 4:+19599733 MsG0480019399.01.T01:CDS
TGACAGTGAGATTGAATCTT+TGG 0.289658 4:-19599373 None:intergenic
ATAACAGAGGCAACACTTCT+TGG 0.295424 4:-19598066 None:intergenic
AACCATGCTTGGAGAGAAAT+TGG 0.296203 4:+19598635 MsG0480019399.01.T01:CDS
CTTGCATTGGCTCTTGGACT+TGG 0.306291 4:-19599332 None:intergenic
GGAGGTGAGGTTAGGAAGAT+TGG 0.319221 4:+19599268 MsG0480019399.01.T01:CDS
GACTTGCATATCCTGTGAAT+TGG 0.334196 4:-19600004 None:intergenic
ATTTCAAATATATGAATTGT+TGG 0.348351 4:+19600086 MsG0480019399.01.T01:three_prime_UTR
CCAGGGCTCGTGGATTAATA+AGG 0.351151 4:+19599888 MsG0480019399.01.T01:three_prime_UTR
TTTGCATCTTGTGTTGAAAC+AGG 0.390481 4:-19599829 None:intergenic
GGTGATGATGGGTCGGTTGT+TGG 0.394685 4:-19597896 None:intergenic
AGAGTGCTTGCATTGGCTCT+TGG 0.404507 4:-19599338 None:intergenic
TTCACTTACCCTCGGACAAA+GGG 0.407652 4:+19599662 MsG0480019399.01.T01:CDS
CCTAACCTCACCTCCCAATC+TGG 0.410911 4:-19599260 None:intergenic
GACCTGCAGTCCGGTCGGCC+TGG 0.423724 4:+19599758 MsG0480019399.01.T01:CDS
AAACAGAAACATGGTGATGA+TGG 0.432385 4:-19597908 None:intergenic
AAGGACTTGGTTGGTGGAAG+AGG 0.432566 4:+19599614 MsG0480019399.01.T01:CDS
GAATTACATGTTTGTACTCC+AGG 0.435550 4:+19599870 MsG0480019399.01.T01:exon
GTGATGATGGGTCGGTTGTT+GGG 0.436193 4:-19597895 None:intergenic
TTTCGATAACCAATATTTCA+AGG 0.438590 4:+19599595 MsG0480019399.01.T01:CDS
CCGGTCGGCCTGGAGAGGTT+AGG 0.438880 4:+19599768 MsG0480019399.01.T01:CDS
CCAGATTGGGAGGTGAGGTT+AGG 0.444088 4:+19599260 MsG0480019399.01.T01:CDS
TGCAGACAGGAGGACCAGAT+TGG 0.458093 4:+19599246 MsG0480019399.01.T01:intron
TTCTAGAGATGCTGTAGCAC+TGG 0.460212 4:+19598770 MsG0480019399.01.T01:CDS
CCTTATTAATCCACGAGCCC+TGG 0.461092 4:-19599888 None:intergenic
TAACCAATATTTCAAGGACT+TGG 0.464692 4:+19599601 MsG0480019399.01.T01:CDS
TGTTTGTTTGTTTGTGTGTG+TGG 0.466529 4:-19597822 None:intergenic
AAAGACCTTGTAGCACTCTC+AGG 0.474322 4:+19599395 MsG0480019399.01.T01:CDS
GGACAGCTTAACAGCAAGTC+AGG 0.475103 4:+19599289 MsG0480019399.01.T01:CDS
TTTCACTTACCCTCGGACAA+AGG 0.476931 4:+19599661 MsG0480019399.01.T01:CDS
CTCCAGGCCGACCGGACTGC+AGG 0.477606 4:-19599760 None:intergenic
CAATTCCTCCTAACCTCTCC+AGG 0.478911 4:-19599776 None:intergenic
GCAGTAGAGAAGGCTTGTCC+TGG 0.487982 4:+19598714 MsG0480019399.01.T01:CDS
AAATCACAGGAGTTGAATCA+AGG 0.488465 4:-19599574 None:intergenic
GTTGAAGGGATGTTGAAAAT+GGG 0.491299 4:+19599734 MsG0480019399.01.T01:CDS
AGTTGTTGATGAGGTTAAAG+AGG 0.491847 4:+19598692 MsG0480019399.01.T01:CDS
CATAATTATAATATCAGCAC+AGG 0.491925 4:-19598745 None:intergenic
ACTTGCATATCCTGTGAATT+GGG 0.492793 4:-19600003 None:intergenic
AGCAGGATCAAGTGCAGGGT+CGG 0.497906 4:-19599492 None:intergenic
CTAAAAGCAGGATCAAGTGC+AGG 0.499939 4:-19599497 None:intergenic
CAATATTTCAAGGACTTGGT+TGG 0.502030 4:+19599605 MsG0480019399.01.T01:CDS
TTTCGGCTATACAATCAATC+AGG 0.502523 4:+19599458 MsG0480019399.01.T01:CDS
GCAGACAGGAGGACCAGATT+GGG 0.504736 4:+19599247 MsG0480019399.01.T01:intron
GCAGGATCAAGTGCAGGGTC+GGG 0.507890 4:-19599491 None:intergenic
TCTCATAACATCTCTGACAA+TGG 0.508376 4:-19598025 None:intergenic
ATCATTTGAAGTTGTTGATG+AGG 0.515377 4:+19598683 MsG0480019399.01.T01:CDS
CCTAACCTCTCCAGGCCGAC+CGG 0.519904 4:-19599768 None:intergenic
AAGAGGAGACACTAGACATA+AGG 0.531514 4:-19597798 None:intergenic
TCATCATCAGATCTTCGACC+TGG 0.531744 4:+19597970 MsG0480019399.01.T01:CDS
GATGATACACCAACCATGCT+TGG 0.535946 4:+19598624 MsG0480019399.01.T01:CDS
GATGTTGATCAAAATAAGAC+AGG 0.536838 4:+19599548 MsG0480019399.01.T01:CDS
TATTTCAAGGACTTGGTTGG+TGG 0.538804 4:+19599608 MsG0480019399.01.T01:CDS
GGTTAAAGAGGCAGTAGAGA+AGG 0.543690 4:+19598704 MsG0480019399.01.T01:CDS
ATCAATGAGAGTGCTTGCAT+TGG 0.546114 4:-19599345 None:intergenic
CTCTCAGGATCTCACTCTAT+CGG 0.551228 4:+19599410 MsG0480019399.01.T01:CDS
AACAGAAACATGGTGATGAT+GGG 0.552488 4:-19597907 None:intergenic
TTGTTTGTGTGTGTGGAAAG+AGG 0.557461 4:-19597815 None:intergenic
TGTTTGTACTCCAGGGCTCG+TGG 0.559365 4:+19599878 MsG0480019399.01.T01:three_prime_UTR
AGCATCTCATCCCAATTCAC+AGG 0.561600 4:+19599993 MsG0480019399.01.T01:three_prime_UTR
AAAATGGGTGACCTGCAGTC+CGG 0.562097 4:+19599749 MsG0480019399.01.T01:CDS
AAGTAAACTGTAATGCATCA+TGG 0.562164 4:+19599953 MsG0480019399.01.T01:three_prime_UTR
CATCATCAGATCTTCGACCT+GGG 0.562501 4:+19597971 MsG0480019399.01.T01:CDS
GCAGTCCGGTCGGCCTGGAG+AGG 0.564531 4:+19599763 MsG0480019399.01.T01:CDS
AGCCAATTTCTCTCCAAGCA+TGG 0.571093 4:-19598637 None:intergenic
CTCACTAACCCCTTTGTCCG+AGG 0.579169 4:-19599671 None:intergenic
TCAAGTTCTAGTCTAAAAGC+AGG 0.579701 4:-19599509 None:intergenic
TCAGCACAGGAAACAACTCC+AGG 0.582131 4:-19598732 None:intergenic
GGATCTCACTCTATCGGCCA+AGG 0.583713 4:+19599416 MsG0480019399.01.T01:CDS
GTCGGCCTGGAGAGGTTAGG+AGG 0.583830 4:+19599771 MsG0480019399.01.T01:CDS
AATTACATGTTTGTACTCCA+GGG 0.587304 4:+19599871 MsG0480019399.01.T01:exon
TCACTAACCCCTTTGTCCGA+GGG 0.588575 4:-19599670 None:intergenic
TATTGGTTATCGAAAATCAC+AGG 0.593232 4:-19599587 None:intergenic
AATTTCTCTCCAAGCATGGT+TGG 0.597888 4:-19598633 None:intergenic
CTATACAATCAATCAGGCAG+CGG 0.615388 4:+19599464 MsG0480019399.01.T01:CDS
GAGATCCTGAGAGTGCTACA+AGG 0.617824 4:-19599400 None:intergenic
TGGGTGACCTGCAGTCCGGT+CGG 0.618415 4:+19599753 MsG0480019399.01.T01:CDS
GACAGGAGGACCAGATTGGG+AGG 0.631702 4:+19599250 MsG0480019399.01.T01:intron
TAAAAGCAGGATCAAGTGCA+GGG 0.654038 4:-19599496 None:intergenic
GAGGACCAGATTGGGAGGTG+AGG 0.674270 4:+19599255 MsG0480019399.01.T01:CDS
TCACTTACCCTCGGACAAAG+GGG 0.682108 4:+19599663 MsG0480019399.01.T01:CDS
GAAACATGGTGATGATGGGT+CGG 0.682353 4:-19597903 None:intergenic
GAAGATCATAAACAGAAACA+TGG 0.684089 4:-19597917 None:intergenic
GTTGTTGGGAATCTGAAACA+TGG 0.693200 4:-19597881 None:intergenic
AAATTGAAATCTCATAACAG+AGG 0.697630 4:-19598079 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCAAATATATGAATTGT+TGG + Chr4:19600086-19600105 MsG0480019399.01.T01:three_prime_UTR 15.0%
!!! AAAGATAAATATTTTTGATG+TGG - Chr4:19599128-19599147 None:intergenic 15.0%
!!! AAGATAAATATTTTTGATGT+GGG - Chr4:19599127-19599146 None:intergenic 15.0%
!!! AATTTTTAGATATGAAAAGT+TGG + Chr4:19598311-19598330 MsG0480019399.01.T01:intron 15.0%
!!! CATCAAAAATATTTATCTTT+TGG + Chr4:19599128-19599147 MsG0480019399.01.T01:intron 15.0%
!!! GAAATTTTGAATACTAAAAA+AGG - Chr4:19600071-19600090 None:intergenic 15.0%
!!! TTGAAAAGATAAAATTTTGA+TGG - Chr4:19598151-19598170 None:intergenic 15.0%
!!! AATAATACATCTTGTTTACA+TGG - Chr4:19599181-19599200 None:intergenic 20.0%
!!! TTATTTGTTGAATTTGTGAA+GGG + Chr4:19598579-19598598 MsG0480019399.01.T01:intron 20.0%
!!! TTTATTTGTTGAATTTGTGA+AGG + Chr4:19598578-19598597 MsG0480019399.01.T01:intron 20.0%
! AAAAACTTTGTTGAATGCAT+TGG + Chr4:19600128-19600147 MsG0480019399.01.T01:three_prime_UTR 25.0%
! AAATTGAAATCTCATAACAG+AGG - Chr4:19598082-19598101 None:intergenic 25.0%
! CATAATTATAATATCAGCAC+AGG - Chr4:19598748-19598767 None:intergenic 25.0%
! GAAATAGCCAAATTCAAATT+CGG - Chr4:19598430-19598449 None:intergenic 25.0%
! GAATTTGAATTTGGCTATTT+CGG + Chr4:19598429-19598448 MsG0480019399.01.T01:intron 25.0%
! TGATCTTTATATCTACTTTG+TGG + Chr4:19598231-19598250 MsG0480019399.01.T01:intron 25.0%
! TTGTTTACATGGACAAAATT+TGG - Chr4:19599170-19599189 None:intergenic 25.0%
! TTTCGATAACCAATATTTCA+AGG + Chr4:19599595-19599614 MsG0480019399.01.T01:CDS 25.0%
!! ATGACAACTAAAAATGCTTT+TGG - Chr4:19600032-19600051 None:intergenic 25.0%
!! CTGTGCTGATATTATAATTA+TGG + Chr4:19598746-19598765 MsG0480019399.01.T01:CDS 25.0%
!! TATTTGTTGAATTTGTGAAG+GGG + Chr4:19598580-19598599 MsG0480019399.01.T01:intron 25.0%
!!! GATGTTTTTCAATCATGTTT+CGG + Chr4:19599441-19599460 MsG0480019399.01.T01:CDS 25.0%
!!! TTATTTTGATCAACATCTAG+TGG - Chr4:19599545-19599564 None:intergenic 25.0%
!!! TTTTCAAAGCATTTGTTGAA+GGG + Chr4:19599720-19599739 MsG0480019399.01.T01:CDS 25.0%
!!! TTTTTCAAAGCATTTGTTGA+AGG + Chr4:19599719-19599738 MsG0480019399.01.T01:CDS 25.0%
AACATTTCACCCTTAGAAAA+CGG - Chr4:19598980-19598999 None:intergenic 30.0%
AAGTAAACTGTAATGCATCA+TGG + Chr4:19599953-19599972 MsG0480019399.01.T01:three_prime_UTR 30.0%
AATTACATGTTTGTACTCCA+GGG + Chr4:19599871-19599890 MsG0480019399.01.T01:exon 30.0%
ACAAAAACAGATATCACTAC+AGG - Chr4:19599076-19599095 None:intergenic 30.0%
AGATATCTCAACAGTTAACA+AGG + Chr4:19598889-19598908 MsG0480019399.01.T01:intron 30.0%
CAAAAACAGATATCACTACA+GGG - Chr4:19599075-19599094 None:intergenic 30.0%
CATAATCATTGATCTCCATA+GGG + Chr4:19598378-19598397 MsG0480019399.01.T01:intron 30.0%
GAAGATCATAAACAGAAACA+TGG - Chr4:19597920-19597939 None:intergenic 30.0%
GATATCTCAACAGTTAACAA+GGG + Chr4:19598890-19598909 MsG0480019399.01.T01:intron 30.0%
GATGTTGATCAAAATAAGAC+AGG + Chr4:19599548-19599567 MsG0480019399.01.T01:CDS 30.0%
TAACCAATATTTCAAGGACT+TGG + Chr4:19599601-19599620 MsG0480019399.01.T01:CDS 30.0%
TACATGGACAAAATTTGGAA+AGG - Chr4:19599165-19599184 None:intergenic 30.0%
TCATAATCATTGATCTCCAT+AGG + Chr4:19598377-19598396 MsG0480019399.01.T01:intron 30.0%
TGAGAAAGCAGTAAGAAAAT+AGG + Chr4:19599039-19599058 MsG0480019399.01.T01:intron 30.0%
! ATCATTTGAAGTTGTTGATG+AGG + Chr4:19598683-19598702 MsG0480019399.01.T01:CDS 30.0%
! TATTGGTTATCGAAAATCAC+AGG - Chr4:19599590-19599609 None:intergenic 30.0%
! TGTATACTTTTATTGCAGAC+AGG + Chr4:19599233-19599252 MsG0480019399.01.T01:intron 30.0%
!!! TGATTTATGCCGTTTTCTAA+GGG + Chr4:19598968-19598987 MsG0480019399.01.T01:intron 30.0%
!!! TTGATTTATGCCGTTTTCTA+AGG + Chr4:19598967-19598986 MsG0480019399.01.T01:intron 30.0%
AAATCACAGGAGTTGAATCA+AGG - Chr4:19599577-19599596 None:intergenic 35.0%
ACTTCGACCGAATTTGAATT+TGG + Chr4:19598420-19598439 MsG0480019399.01.T01:intron 35.0%
ACTTGCATATCCTGTGAATT+GGG - Chr4:19600006-19600025 None:intergenic 35.0%
CAACCAAGTCCTTGAAATAT+TGG - Chr4:19599607-19599626 None:intergenic 35.0%
GAATTACATGTTTGTACTCC+AGG + Chr4:19599870-19599889 MsG0480019399.01.T01:exon 35.0%
GATTGCTTGTTTCAGTTGTT+TGG + Chr4:19598501-19598520 MsG0480019399.01.T01:intron 35.0%
GTTGAAGGGATGTTGAAAAT+GGG + Chr4:19599734-19599753 MsG0480019399.01.T01:CDS 35.0%
TCTCATAACATCTCTGACAA+TGG - Chr4:19598028-19598047 None:intergenic 35.0%
TGACAGTGAGATTGAATCTT+TGG - Chr4:19599376-19599395 None:intergenic 35.0%
TGATTGAAAAACATCGACCT+TGG - Chr4:19599436-19599455 None:intergenic 35.0%
TGTTGAAGGGATGTTGAAAA+TGG + Chr4:19599733-19599752 MsG0480019399.01.T01:CDS 35.0%
TGTTTGTTTGTTTGTGTGTG+TGG - Chr4:19597825-19597844 None:intergenic 35.0%
TTTCGGCTATACAATCAATC+AGG + Chr4:19599458-19599477 MsG0480019399.01.T01:CDS 35.0%
TTTGCATCTTGTGTTGAAAC+AGG - Chr4:19599832-19599851 None:intergenic 35.0%
! AAACACTTTTCACTTACCCT+CGG + Chr4:19599654-19599673 MsG0480019399.01.T01:CDS 35.0%
! AAACAGAAACATGGTGATGA+TGG - Chr4:19597911-19597930 None:intergenic 35.0%
! AACAGAAACATGGTGATGAT+GGG - Chr4:19597910-19597929 None:intergenic 35.0%
! AGTTGTTGATGAGGTTAAAG+AGG + Chr4:19598692-19598711 MsG0480019399.01.T01:CDS 35.0%
! ATACTTTTATTGCAGACAGG+AGG + Chr4:19599236-19599255 MsG0480019399.01.T01:intron 35.0%
! CAATATTTCAAGGACTTGGT+TGG + Chr4:19599605-19599624 MsG0480019399.01.T01:CDS 35.0%
! TCAAGTTCTAGTCTAAAAGC+AGG - Chr4:19599512-19599531 None:intergenic 35.0%
!!! CATGTTTTTGAGTAAAACCC+AGG - Chr4:19597991-19598010 None:intergenic 35.0%
AACAAGCAATCGAGCTTAAG+TGG - Chr4:19598492-19598511 None:intergenic 40.0%
AACCATGCTTGGAGAGAAAT+TGG + Chr4:19598635-19598654 MsG0480019399.01.T01:CDS 40.0%
AAGAGGAGACACTAGACATA+AGG - Chr4:19597801-19597820 None:intergenic 40.0%
AATCATTGATCTCCATAGGG+AGG + Chr4:19598381-19598400 MsG0480019399.01.T01:intron 40.0%
AATTTCTCTCCAAGCATGGT+TGG - Chr4:19598636-19598655 None:intergenic 40.0%
ATAACAGAGGCAACACTTCT+TGG - Chr4:19598069-19598088 None:intergenic 40.0%
ATCATTGATCTCCATAGGGA+GGG + Chr4:19598382-19598401 MsG0480019399.01.T01:intron 40.0%
ATTCAAATTCGGTCGAAGTC+TGG - Chr4:19598419-19598438 None:intergenic 40.0%
CTATACAATCAATCAGGCAG+CGG + Chr4:19599464-19599483 MsG0480019399.01.T01:CDS 40.0%
GACTTGCATATCCTGTGAAT+TGG - Chr4:19600007-19600026 None:intergenic 40.0%
TAAAAGCAGGATCAAGTGCA+GGG - Chr4:19599499-19599518 None:intergenic 40.0%
TTGTTTGTGTGTGTGGAAAG+AGG - Chr4:19597818-19597837 None:intergenic 40.0%
! CTGACAATGGTTTCAGCTTT+TGG - Chr4:19598015-19598034 None:intergenic 40.0%
! GTTGTTGGGAATCTGAAACA+TGG - Chr4:19597884-19597903 None:intergenic 40.0%
! TATTTCAAGGACTTGGTTGG+TGG + Chr4:19599608-19599627 MsG0480019399.01.T01:CDS 40.0%
!! ATCAATGAGAGTGCTTGCAT+TGG - Chr4:19599348-19599367 None:intergenic 40.0%
AAAGACCTTGTAGCACTCTC+AGG + Chr4:19599395-19599414 MsG0480019399.01.T01:CDS 45.0%
AGCATCTCATCCCAATTCAC+AGG + Chr4:19599993-19600012 MsG0480019399.01.T01:three_prime_UTR 45.0%
AGCCAATTTCTCTCCAAGCA+TGG - Chr4:19598640-19598659 None:intergenic 45.0%
CATCATCAGATCTTCGACCT+GGG + Chr4:19597971-19597990 MsG0480019399.01.T01:CDS 45.0%
CTAAAAGCAGGATCAAGTGC+AGG - Chr4:19599500-19599519 None:intergenic 45.0%
CTCTCAGGATCTCACTCTAT+CGG + Chr4:19599410-19599429 MsG0480019399.01.T01:CDS 45.0%
GATGATACACCAACCATGCT+TGG + Chr4:19598624-19598643 MsG0480019399.01.T01:CDS 45.0%
GGTTAAAGAGGCAGTAGAGA+AGG + Chr4:19598704-19598723 MsG0480019399.01.T01:CDS 45.0%
TCATCATCAGATCTTCGACC+TGG + Chr4:19597970-19597989 MsG0480019399.01.T01:CDS 45.0%
TCATTGATCTCCATAGGGAG+GGG + Chr4:19598383-19598402 MsG0480019399.01.T01:intron 45.0%
TTCACTTACCCTCGGACAAA+GGG + Chr4:19599662-19599681 MsG0480019399.01.T01:CDS 45.0%
TTTCACTTACCCTCGGACAA+AGG + Chr4:19599661-19599680 MsG0480019399.01.T01:CDS 45.0%
! TTCTAGAGATGCTGTAGCAC+TGG + Chr4:19598770-19598789 MsG0480019399.01.T01:CDS 45.0%
!! GAAACATGGTGATGATGGGT+CGG - Chr4:19597906-19597925 None:intergenic 45.0%
AAAATGGGTGACCTGCAGTC+CGG + Chr4:19599749-19599768 MsG0480019399.01.T01:CDS 50.0%
ATTACCAGAACCCCTCCCTA+TGG - Chr4:19598396-19598415 None:intergenic 50.0%
CAATTCCTCCTAACCTCTCC+AGG - Chr4:19599779-19599798 None:intergenic 50.0%
CCTTATTAATCCACGAGCCC+TGG - Chr4:19599891-19599910 None:intergenic 50.0%
GGACAGCTTAACAGCAAGTC+AGG + Chr4:19599289-19599308 MsG0480019399.01.T01:CDS 50.0%
GGAGGTGAGGTTAGGAAGAT+TGG + Chr4:19599268-19599287 MsG0480019399.01.T01:CDS 50.0%
TCACTAACCCCTTTGTCCGA+GGG - Chr4:19599673-19599692 None:intergenic 50.0%
TCACTTACCCTCGGACAAAG+GGG + Chr4:19599663-19599682 MsG0480019399.01.T01:CDS 50.0%
TCAGCACAGGAAACAACTCC+AGG - Chr4:19598735-19598754 None:intergenic 50.0%
! CCAGGGCTCGTGGATTAATA+AGG + Chr4:19599888-19599907 MsG0480019399.01.T01:three_prime_UTR 50.0%
!! AAGGACTTGGTTGGTGGAAG+AGG + Chr4:19599614-19599633 MsG0480019399.01.T01:CDS 50.0%
!! AGAGTGCTTGCATTGGCTCT+TGG - Chr4:19599341-19599360 None:intergenic 50.0%
!! CTTGCATTGGCTCTTGGACT+TGG - Chr4:19599335-19599354 None:intergenic 50.0%
!! GAGATCCTGAGAGTGCTACA+AGG - Chr4:19599403-19599422 None:intergenic 50.0%
!! GTGATGATGGGTCGGTTGTT+GGG - Chr4:19597898-19597917 None:intergenic 50.0%
AGCAGGATCAAGTGCAGGGT+CGG - Chr4:19599495-19599514 None:intergenic 55.0%
ATCTCCATAGGGAGGGGTTC+TGG + Chr4:19598389-19598408 MsG0480019399.01.T01:intron 55.0%
CCAGATTGGGAGGTGAGGTT+AGG + Chr4:19599260-19599279 MsG0480019399.01.T01:CDS 55.0%
CCTAACCTCACCTCCCAATC+TGG - Chr4:19599263-19599282 None:intergenic 55.0%
CTCACTAACCCCTTTGTCCG+AGG - Chr4:19599674-19599693 None:intergenic 55.0%
GCAGACAGGAGGACCAGATT+GGG + Chr4:19599247-19599266 MsG0480019399.01.T01:intron 55.0%
GCAGTAGAGAAGGCTTGTCC+TGG + Chr4:19598714-19598733 MsG0480019399.01.T01:CDS 55.0%
GGATCTCACTCTATCGGCCA+AGG + Chr4:19599416-19599435 MsG0480019399.01.T01:CDS 55.0%
TGCAGACAGGAGGACCAGAT+TGG + Chr4:19599246-19599265 MsG0480019399.01.T01:intron 55.0%
TGTTTGTACTCCAGGGCTCG+TGG + Chr4:19599878-19599897 MsG0480019399.01.T01:three_prime_UTR 55.0%
!! GGTGATGATGGGTCGGTTGT+TGG - Chr4:19597899-19597918 None:intergenic 55.0%
GACAGGAGGACCAGATTGGG+AGG + Chr4:19599250-19599269 MsG0480019399.01.T01:intron 60.0%
GAGGACCAGATTGGGAGGTG+AGG + Chr4:19599255-19599274 MsG0480019399.01.T01:CDS 60.0%
GCAGGATCAAGTGCAGGGTC+GGG - Chr4:19599494-19599513 None:intergenic 60.0%
CCTAACCTCTCCAGGCCGAC+CGG - Chr4:19599771-19599790 None:intergenic 65.0%
GTCGGCCTGGAGAGGTTAGG+AGG + Chr4:19599771-19599790 MsG0480019399.01.T01:CDS 65.0%
TGGGTGACCTGCAGTCCGGT+CGG + Chr4:19599753-19599772 MsG0480019399.01.T01:CDS 65.0%
CCGGTCGGCCTGGAGAGGTT+AGG + Chr4:19599768-19599787 MsG0480019399.01.T01:CDS 70.0%
CTCCAGGCCGACCGGACTGC+AGG - Chr4:19599763-19599782 None:intergenic 75.0%
GACCTGCAGTCCGGTCGGCC+TGG + Chr4:19599758-19599777 MsG0480019399.01.T01:CDS 75.0%
GCAGTCCGGTCGGCCTGGAG+AGG + Chr4:19599763-19599782 MsG0480019399.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 19597781 19600153 19597781 ID=MsG0480019399.01;Name=MsG0480019399.01
Chr4 mRNA 19597781 19600153 19597781 ID=MsG0480019399.01.T01;Parent=MsG0480019399.01;Name=MsG0480019399.01.T01;_AED=0.28;_eAED=0.28;_QI=21|1|1|1|1|1|3|282|376
Chr4 exon 19597781 19598119 19597781 ID=MsG0480019399.01.T01:exon:9618;Parent=MsG0480019399.01.T01
Chr4 exon 19598600 19598791 19598600 ID=MsG0480019399.01.T01:exon:9619;Parent=MsG0480019399.01.T01
Chr4 exon 19599251 19600153 19599251 ID=MsG0480019399.01.T01:exon:9620;Parent=MsG0480019399.01.T01
Chr4 five_prime_UTR 19597781 19597801 19597781 ID=MsG0480019399.01.T01:five_prime_utr;Parent=MsG0480019399.01.T01
Chr4 CDS 19597802 19598119 19597802 ID=MsG0480019399.01.T01:cds;Parent=MsG0480019399.01.T01
Chr4 CDS 19598600 19598791 19598600 ID=MsG0480019399.01.T01:cds;Parent=MsG0480019399.01.T01
Chr4 CDS 19599251 19599871 19599251 ID=MsG0480019399.01.T01:cds;Parent=MsG0480019399.01.T01
Chr4 three_prime_UTR 19599872 19600153 19599872 ID=MsG0480019399.01.T01:three_prime_utr;Parent=MsG0480019399.01.T01
Gene Sequence

>MsG0480019399.01.T01

ATGTCTAGTGTCTCCTCTTTCCACACACACAAACAAACAAACATACTCAATAGTTCAAAACAAAACAACAAACGTAGTACCATGTTTCAGATTCCCAACAACCGACCCATCATCACCATGTTTCTGTTTATGATCTTCATCATAAACATCATCATAGTAACATCATCATCATCATCAGATCTTCGACCTGGGTTTTACTCAAAAACATGTCCAAAAGCTGAAACCATTGTCAGAGATGTTATGAGAAAAGCTCTTATAAGAGAACCAAGAAGTGTTGCCTCTGTTATGAGATTTCAATTTCATGATTGCTTTGTTAATGGGTGTGATGCTTCTATGTTACTTGATGATACACCAACCATGCTTGGAGAGAAATTGGCTCTTTCAAATATAAATTCACTTAGATCATTTGAAGTTGTTGATGAGGTTAAAGAGGCAGTAGAGAAGGCTTGTCCTGGAGTTGTTTCCTGTGCTGATATTATAATTATGGCTTCTAGAGATGCTGTAGCACTGACAGGAGGACCAGATTGGGAGGTGAGGTTAGGAAGATTGGACAGCTTAACAGCAAGTCAGGAAGACTCAGATAATATCATGCCAAGTCCAAGAGCCAATGCAAGCACTCTCATTGATCTCTTCCAAAGATTCAATCTCACTGTCAAAGACCTTGTAGCACTCTCAGGATCTCACTCTATCGGCCAAGGTCGATGTTTTTCAATCATGTTTCGGCTATACAATCAATCAGGCAGCGGAAAACCCGACCCTGCACTTGATCCTGCTTTTAGACTAGAACTTGACAAGCTTTGTCCACTAGATGTTGATCAAAATAAGACAGGAAACCTTGATTCAACTCCTGTGATTTTCGATAACCAATATTTCAAGGACTTGGTTGGTGGAAGAGGATTTCTCAATTCTGATCAAACACTTTTCACTTACCCTCGGACAAAGGGGTTAGTGAGATTCTATAGTAGAGATCAAAGTGAGTTTTTCAAAGCATTTGTTGAAGGGATGTTGAAAATGGGTGACCTGCAGTCCGGTCGGCCTGGAGAGGTTAGGAGGAATTGCAGAGTTGTGAATGCTCGCTTCGATAATGTCCTGTTTCAACACAAGATGCAAAAAAATGTTAAATCAATCTGA
Protein sequence

>MsG0480019399.01.T01

MSSVSSFHTHKQTNILNSSKQNNKRSTMFQIPNNRPIITMFLFMIFIINIIIVTSSSSSDLRPGFYSKTCPKAETIVRDVMRKALIREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSFEVVDEVKEAVEKACPGVVSCADIIIMASRDAVALTGGPDWEVRLGRLDSLTASQEDSDNIMPSPRANASTLIDLFQRFNLTVKDLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALDPAFRLELDKLCPLDVDQNKTGNLDSTPVIFDNQYFKDLVGGRGFLNSDQTLFTYPRTKGLVRFYSRDQSEFFKAFVEGMLKMGDLQSGRPGEVRRNCRVVNARFDNVLFQHKMQKNVKSI*