AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017351.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017351.01.T01 MTR_3g105790 96.914 324 9 1 1 323 1 324 0.0 642
MsG0380017351.01.T01 MTR_3g105790 97.984 248 4 1 77 323 1 248 1.03e-180 499
MsG0380017351.01.T01 MTR_7g029030 40.184 326 184 3 1 321 1 320 7.19e-85 259
MsG0380017351.01.T01 MTR_5g022870 41.158 311 172 7 15 321 13 316 1.03e-79 245
MsG0380017351.01.T01 MTR_8g075100 40.984 305 171 4 20 321 21 319 6.28e-78 241
MsG0380017351.01.T01 MTR_2g008710 42.724 323 175 5 5 321 7 325 2.45e-77 239
MsG0380017351.01.T01 MTR_1g025980 38.941 321 185 6 1 317 1 314 2.61e-76 237
MsG0380017351.01.T01 MTR_1g101830 40.190 316 180 5 9 321 13 322 1.19e-75 235
MsG0380017351.01.T01 MTR_3g092990 39.024 328 191 6 1 321 1 326 1.20e-73 230
MsG0380017351.01.T01 MTR_1g009750 39.385 325 184 6 8 321 6 328 1.77e-73 230
MsG0380017351.01.T01 MTR_2g084080 39.130 322 180 4 7 321 5 317 2.84e-72 226
MsG0380017351.01.T01 MTR_5g021060 41.667 300 165 5 29 321 34 330 1.77e-71 225
MsG0380017351.01.T01 MTR_7g107520 40.683 322 178 7 7 321 5 320 1.12e-70 222
MsG0380017351.01.T01 MTR_5g017860 40.184 326 184 7 3 321 5 326 2.67e-70 221
MsG0380017351.01.T01 MTR_4g095450 39.803 304 168 6 23 318 25 321 3.61e-70 221
MsG0380017351.01.T01 MTR_5g017850 39.692 325 187 6 3 321 5 326 5.22e-70 221
MsG0380017351.01.T01 MTR_7g086820 39.869 306 166 7 23 321 18 312 5.81e-70 220
MsG0380017351.01.T01 MTR_4g046713 38.066 331 181 7 5 321 6 326 7.95e-70 220
MsG0380017351.01.T01 MTR_2g084090 38.629 321 180 5 9 321 7 318 9.37e-70 220
MsG0380017351.01.T01 MTR_5g014100 40.523 306 173 5 25 321 26 331 1.13e-69 220
MsG0380017351.01.T01 MTR_2g088770 39.755 327 187 7 1 321 3 325 2.63e-69 219
MsG0380017351.01.T01 MTR_7g086870 39.404 302 168 5 24 321 21 311 4.01e-69 218
MsG0380017351.01.T01 MTR_4g125940 39.091 330 183 8 4 321 6 329 6.30e-69 218
MsG0380017351.01.T01 MTR_2g084110 38.438 320 181 4 9 321 7 317 7.31e-69 218
MsG0380017351.01.T01 MTR_2g099175 39.748 317 180 6 12 321 23 335 7.90e-69 218
MsG0380017351.01.T01 MTR_4g087965 38.080 323 162 6 19 318 36 343 1.19e-68 218
MsG0380017351.01.T01 MTR_5g016010 37.304 319 189 6 8 318 11 326 4.71e-68 216
MsG0380017351.01.T01 MTR_8g076820 39.869 306 174 5 23 321 28 330 5.18e-68 216
MsG0380017351.01.T01 MTR_4g114210 39.871 311 172 6 20 321 16 320 1.82e-67 214
MsG0380017351.01.T01 MTR_4g127670 40.268 298 171 4 29 321 28 323 2.39e-67 214
MsG0380017351.01.T01 MTR_4g122640 40.391 307 169 5 23 321 36 336 2.83e-67 214
MsG0380017351.01.T01 MTR_2g028980 38.720 328 184 7 6 321 8 330 4.79e-67 214
MsG0380017351.01.T01 MTR_2g029860 39.441 322 182 6 7 321 15 330 1.56e-66 213
MsG0380017351.01.T01 MTR_1g086320 38.344 326 181 8 11 321 13 333 3.27e-66 211
MsG0380017351.01.T01 MTR_2g029820 39.482 309 176 6 22 321 24 330 4.35e-66 212
MsG0380017351.01.T01 MTR_1g054205 40.397 302 168 6 29 321 28 326 7.08e-66 210
MsG0380017351.01.T01 MTR_5g074970 35.583 326 190 6 6 321 11 326 1.29e-65 209
MsG0380017351.01.T01 MTR_2g029815 38.558 319 183 6 13 321 15 330 1.38e-65 210
MsG0380017351.01.T01 MTR_2g029830 39.274 303 173 5 23 317 26 325 1.58e-65 210
MsG0380017351.01.T01 MTR_2g029560 39.934 303 171 5 23 317 22 321 2.22e-65 209
MsG0380017351.01.T01 MTR_3g094650 38.272 324 178 7 6 321 13 322 3.23e-65 208
MsG0380017351.01.T01 MTR_3g072190 37.500 320 186 3 7 321 8 318 3.39e-65 208
MsG0380017351.01.T01 MTR_2g029750 39.032 310 178 5 20 321 24 330 3.40e-65 209
MsG0380017351.01.T01 MTR_7g093370 37.910 335 191 8 2 321 39 371 5.97e-65 209
MsG0380017351.01.T01 MTR_1g077000 38.487 304 165 7 25 321 39 327 8.83e-65 207
MsG0380017351.01.T01 MTR_1g038680 39.935 308 162 10 29 321 33 332 1.29e-64 207
MsG0380017351.01.T01 MTR_2g084000 36.646 322 186 5 9 321 7 319 1.53e-64 206
MsG0380017351.01.T01 MTR_2g084010 36.760 321 186 5 9 321 7 318 2.14e-64 206
MsG0380017351.01.T01 MTR_2g084020 36.760 321 186 5 9 321 7 318 2.98e-64 206
MsG0380017351.01.T01 MTR_2g029800 38.667 300 175 4 29 321 33 330 1.20e-63 205
MsG0380017351.01.T01 MTR_6g027440 37.500 320 189 7 7 322 3 315 2.56e-63 203
MsG0380017351.01.T01 MTR_2g029850 39.482 309 176 6 22 321 24 330 3.07e-63 204
MsG0380017351.01.T01 MTR_5g083860 35.913 323 189 5 7 321 13 325 6.52e-63 202
MsG0380017351.01.T01 MTR_3g092990 36.890 328 187 7 1 321 1 315 7.13e-63 202
MsG0380017351.01.T01 MTR_6g043280 35.737 319 190 5 8 321 24 332 9.55e-63 202
MsG0380017351.01.T01 MTR_1g086490 36.446 332 190 8 11 323 13 342 1.07e-62 202
MsG0380017351.01.T01 MTR_2g029740 37.578 322 190 5 9 321 11 330 1.30e-62 202
MsG0380017351.01.T01 MTR_3g466200 34.365 323 188 6 7 321 14 320 2.55e-62 201
MsG0380017351.01.T01 MTR_1g009750 36.533 323 179 7 8 321 6 311 5.04e-62 200
MsG0380017351.01.T01 MTR_6g043460 37.160 331 184 8 5 321 8 328 5.50e-62 201
MsG0380017351.01.T01 MTR_4g132490 36.393 305 180 6 25 321 29 327 8.54e-62 200
MsG0380017351.01.T01 MTR_0155s0040 32.710 321 197 6 8 321 7 315 1.27e-61 199
MsG0380017351.01.T01 MTR_4g029190 36.859 312 180 5 18 321 38 340 2.00e-61 199
MsG0380017351.01.T01 MTR_6g043240 36.585 328 184 7 8 321 14 331 5.96e-61 198
MsG0380017351.01.T01 MTR_2g029730 36.810 326 194 6 6 321 3 326 1.81e-60 197
MsG0380017351.01.T01 MTR_4g083710 36.503 326 186 6 7 321 9 324 2.17e-60 196
MsG0380017351.01.T01 MTR_4g029170 37.346 324 185 7 6 321 8 321 2.20e-60 196
MsG0380017351.01.T01 MTR_1g022970 38.487 304 178 5 25 321 46 347 5.51e-60 196
MsG0380017351.01.T01 MTR_2g040000 36.842 304 176 7 29 321 33 331 5.57e-60 195
MsG0380017351.01.T01 MTR_1g090760 34.663 326 199 7 7 323 12 332 5.88e-60 195
MsG0380017351.01.T01 MTR_2g008160 39.088 307 174 6 23 321 22 323 7.11e-60 194
MsG0380017351.01.T01 MTR_4g029200 36.184 304 180 3 23 321 44 338 6.87e-59 192
MsG0380017351.01.T01 MTR_4g125940 40.876 274 145 7 59 321 7 274 1.41e-58 190
MsG0380017351.01.T01 MTR_4g074995 37.152 323 169 8 10 321 9 308 3.29e-58 190
MsG0380017351.01.T01 MTR_0286s0010 35.294 323 196 7 7 321 17 334 7.33e-58 190
MsG0380017351.01.T01 MTR_6g008075 35.294 323 196 7 7 321 17 334 7.33e-58 190
MsG0380017351.01.T01 MTR_3g094670 36.111 324 185 6 6 321 13 322 3.27e-57 187
MsG0380017351.01.T01 MTR_7g072510 33.962 318 196 4 9 321 4 312 6.26e-57 187
MsG0380017351.01.T01 MTR_4g133800 37.710 297 175 6 30 323 46 335 8.57e-57 187
MsG0380017351.01.T01 MTR_2g029910 36.842 304 182 5 28 323 33 334 3.24e-56 186
MsG0380017351.01.T01 MTR_3g467600 36.420 324 187 7 8 321 10 324 3.85e-56 185
MsG0380017351.01.T01 MTR_8g062780 33.939 330 203 7 1 321 1 324 5.23e-56 185
MsG0380017351.01.T01 MTR_2g437770 37.333 300 177 7 25 321 50 341 2.01e-55 184
MsG0380017351.01.T01 MTR_3g466180 37.188 320 185 5 7 321 15 323 2.22e-55 183
MsG0380017351.01.T01 MTR_2g008730 37.037 324 168 7 5 321 7 301 1.17e-54 181
MsG0380017351.01.T01 MTR_4g132110 33.739 329 196 7 8 321 7 328 2.18e-54 181
MsG0380017351.01.T01 MTR_4g029180 35.216 301 179 5 28 321 30 321 2.07e-53 178
MsG0380017351.01.T01 MTR_7g026990 34.694 294 177 4 29 317 35 318 2.09e-53 178
MsG0380017351.01.T01 MTR_3g094630 34.796 319 190 5 11 321 14 322 2.87e-53 177
MsG0380017351.01.T01 MTR_5g074710 34.441 331 197 7 1 321 1 321 3.14e-53 177
MsG0380017351.01.T01 MTR_5g074760 34.139 331 198 7 1 321 1 321 4.92e-53 177
MsG0380017351.01.T01 MTR_4g031140 33.846 325 205 8 2 321 5 324 1.15e-52 176
MsG0380017351.01.T01 MTR_7g072480 32.166 314 189 5 18 321 17 316 1.32e-52 176
MsG0380017351.01.T01 MTR_5g033470 35.197 304 183 8 29 321 77 377 1.82e-52 177
MsG0380017351.01.T01 MTR_5g049280 34.740 308 187 7 25 321 33 337 2.14e-52 176
MsG0380017351.01.T01 MTR_4g132110 33.234 334 196 8 8 321 7 333 4.45e-52 175
MsG0380017351.01.T01 MTR_5g074740 34.743 331 196 7 1 321 1 321 7.41e-52 174
MsG0380017351.01.T01 MTR_2g029830 39.922 258 140 6 70 317 5 257 8.96e-52 172
MsG0380017351.01.T01 MTR_4g030890 33.974 312 192 8 17 321 92 396 1.48e-51 176
MsG0380017351.01.T01 MTR_1g115900 35.168 327 190 9 5 321 7 321 2.15e-51 173
MsG0380017351.01.T01 MTR_4g074990 34.628 309 167 7 23 321 22 305 9.89e-51 171
MsG0380017351.01.T01 MTR_1g066710 33.660 306 189 5 23 321 25 323 4.21e-50 169
MsG0380017351.01.T01 MTR_1g066680 34.304 309 182 6 23 321 25 322 1.17e-49 168
MsG0380017351.01.T01 MTR_5g074860 34.675 323 189 8 7 317 9 321 1.32e-49 168
MsG0380017351.01.T01 MTR_1g066640 33.981 309 184 6 23 321 25 323 1.85e-49 167
MsG0380017351.01.T01 MTR_3g072190 37.597 258 147 3 69 321 3 251 3.53e-49 165
MsG0380017351.01.T01 MTR_2g067440 33.435 329 184 6 23 318 58 384 4.70e-49 168
MsG0380017351.01.T01 MTR_1g066380 34.405 311 180 8 23 321 25 323 1.62e-48 165
MsG0380017351.01.T01 MTR_2g008160 34.314 306 155 5 23 321 22 288 4.11e-47 160
MsG0380017351.01.T01 MTR_4g074980 36.015 261 152 3 1 254 1 253 9.25e-47 159
MsG0380017351.01.T01 MTR_4g074980 32.523 329 179 8 1 321 1 294 1.91e-45 156
MsG0380017351.01.T01 MTR_2g077990 32.432 333 185 8 23 318 74 403 2.96e-45 159
MsG0380017351.01.T01 MTR_2g078610 32.132 333 186 8 23 318 74 403 4.32e-45 158
MsG0380017351.01.T01 MTR_2g078280 32.609 322 178 7 23 308 74 392 2.10e-44 156
MsG0380017351.01.T01 MTR_0147s0010 32.595 316 178 7 25 318 77 379 1.04e-42 151
MsG0380017351.01.T01 MTR_2g008160 45.455 176 94 2 23 197 22 196 1.41e-42 146
MsG0380017351.01.T01 MTR_2g067450 37.946 224 129 5 23 240 9 228 6.42e-38 137
MsG0380017351.01.T01 MTR_1g066380 33.962 265 151 8 69 321 3 255 7.75e-37 133
MsG0380017351.01.T01 MTR_5g074860 27.864 323 172 8 7 317 9 282 2.85e-28 111
MsG0380017351.01.T01 MTR_5g074700 33.761 234 125 8 96 323 7 216 6.72e-28 108
MsG0380017351.01.T01 MTR_3g072210 34.715 193 114 3 132 321 55 238 1.21e-26 105
MsG0380017351.01.T01 MTR_2g029880 34.500 200 116 5 127 323 3 190 2.63e-26 103
MsG0380017351.01.T01 MTR_7g086790 33.673 196 104 5 72 264 17 189 5.18e-26 102
MsG0380017351.01.T01 MTR_3g072260 40.476 126 71 1 7 128 8 133 7.39e-23 92.8
MsG0380017351.01.T01 MTR_5g058120 37.821 156 83 4 165 319 15 157 1.05e-21 92.8
MsG0380017351.01.T01 MTR_7g072490 30.638 235 96 8 71 301 2 173 7.00e-20 86.7
MsG0380017351.01.T01 MTR_4g114220 50.617 81 34 1 50 130 28 102 1.54e-19 84.0
MsG0380017351.01.T01 MTR_7g086810 35.593 118 54 1 23 140 4 99 4.50e-19 85.1
MsG0380017351.01.T01 MTR_6g048160 56.923 65 28 0 64 128 22 86 4.97e-19 80.9
MsG0380017351.01.T01 MTR_1g089005 41.026 117 60 3 25 132 15 131 1.83e-16 75.9
MsG0380017351.01.T01 MTR_3g107060 25.000 256 138 8 59 307 108 316 1.36e-15 76.6
MsG0380017351.01.T01 MTR_7g086785 34.906 106 51 2 71 173 4 94 6.70e-15 70.9
MsG0380017351.01.T01 MTR_4g012865 41.791 67 36 1 25 88 77 143 2.47e-13 67.0
MsG0380017351.01.T01 MTR_2g077980 24.910 277 167 10 80 318 8 281 1.13e-11 64.7
MsG0380017351.01.T01 MTR_4g031040 29.771 131 67 4 129 256 23 131 1.92e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017351.01.T01 AT2G24800 64.452 301 105 2 23 321 29 329 2.61e-146 415
MsG0380017351.01.T01 AT4G31760 59.937 317 126 1 6 321 10 326 1.37e-145 413
MsG0380017351.01.T01 AT2G24800 69.512 164 50 0 23 186 29 192 5.06e-84 254
MsG0380017351.01.T01 AT5G14130 42.679 321 175 6 7 321 13 330 1.83e-82 253
MsG0380017351.01.T01 AT5G14130 42.679 321 175 6 7 321 54 371 5.04e-82 253
MsG0380017351.01.T01 AT5G64120 45.667 300 158 3 23 321 33 328 1.80e-80 248
MsG0380017351.01.T01 AT5G51890 43.506 308 162 7 15 314 12 315 2.19e-80 247
MsG0380017351.01.T01 AT5G39580 44.407 295 158 4 29 321 29 319 3.66e-75 234
MsG0380017351.01.T01 AT5G42180 41.270 315 175 6 7 317 5 313 6.32e-75 233
MsG0380017351.01.T01 AT2G18980 40.673 327 184 6 1 321 1 323 1.51e-74 232
MsG0380017351.01.T01 AT1G77100 40.123 324 177 6 6 321 5 319 2.38e-74 232
MsG0380017351.01.T01 AT4G37530 41.479 311 166 6 22 321 24 329 2.27e-73 229
MsG0380017351.01.T01 AT5G66390 42.000 300 164 5 29 321 37 333 2.76e-73 229
MsG0380017351.01.T01 AT1G05260 42.122 311 169 6 18 321 19 325 3.03e-73 229
MsG0380017351.01.T01 AT3G21770 42.105 304 169 6 20 318 24 325 1.87e-72 227
MsG0380017351.01.T01 AT3G49960 40.498 321 180 7 9 321 12 329 5.15e-71 223
MsG0380017351.01.T01 AT4G25980 42.071 309 163 7 23 321 24 326 6.95e-71 223
MsG0380017351.01.T01 AT2G18150 39.344 305 175 5 24 321 35 336 4.24e-70 221
MsG0380017351.01.T01 AT4G37520 41.042 307 171 6 23 321 25 329 5.02e-70 221
MsG0380017351.01.T01 AT2G18140 40.065 307 170 7 24 321 34 335 6.40e-70 221
MsG0380017351.01.T01 AT4G11290 41.368 307 169 6 23 321 23 326 9.37e-70 220
MsG0380017351.01.T01 AT5G64110 41.121 321 177 7 7 321 16 330 8.64e-69 218
MsG0380017351.01.T01 AT4G36430 39.667 300 171 6 29 321 34 330 1.22e-68 218
MsG0380017351.01.T01 AT5G64100 43.098 297 159 6 29 321 41 331 2.61e-68 217
MsG0380017351.01.T01 AT4G17690 38.065 310 178 5 19 321 20 322 8.07e-68 215
MsG0380017351.01.T01 AT5G67400 39.938 323 179 9 9 321 12 329 8.16e-68 215
MsG0380017351.01.T01 AT5G15180 38.532 327 184 8 6 321 9 329 8.62e-68 215
MsG0380017351.01.T01 AT5G24070 40.000 305 171 5 25 321 35 335 8.65e-68 216
MsG0380017351.01.T01 AT4G37520 40.717 307 169 7 23 321 25 326 1.28e-67 215
MsG0380017351.01.T01 AT3G50990 40.193 311 177 6 17 321 34 341 2.34e-67 214
MsG0380017351.01.T01 AT4G33420 39.145 304 163 7 25 321 37 325 3.02e-67 214
MsG0380017351.01.T01 AT4G30170 38.889 306 179 5 21 321 23 325 3.29e-67 214
MsG0380017351.01.T01 AT2G41480 39.803 304 164 7 29 321 33 328 7.31e-67 213
MsG0380017351.01.T01 AT4G33420 39.145 304 163 7 25 321 84 372 1.06e-66 214
MsG0380017351.01.T01 AT3G03670 37.855 317 189 4 9 321 9 321 2.85e-66 211
MsG0380017351.01.T01 AT2G34060 37.952 332 183 8 7 317 13 342 4.21e-66 211
MsG0380017351.01.T01 AT1G14540 36.697 327 189 5 1 321 1 315 9.42e-66 209
MsG0380017351.01.T01 AT1G14550 38.554 332 182 7 1 321 1 321 1.14e-65 209
MsG0380017351.01.T01 AT2G43480 36.928 306 179 6 25 321 35 335 2.21e-65 209
MsG0380017351.01.T01 AT5G17820 37.267 322 191 5 1 321 2 313 4.43e-65 208
MsG0380017351.01.T01 AT3G01190 40.000 310 165 10 22 321 23 321 7.54e-65 207
MsG0380017351.01.T01 AT1G71695 37.419 310 179 6 19 321 38 339 9.61e-65 208
MsG0380017351.01.T01 AT5G19890 36.556 331 196 7 1 321 1 327 1.27e-64 207
MsG0380017351.01.T01 AT5G17820 37.267 322 191 5 1 321 55 366 3.08e-64 207
MsG0380017351.01.T01 AT4G26010 38.438 320 174 8 7 321 8 309 5.69e-64 205
MsG0380017351.01.T01 AT5G47000 37.107 318 187 5 11 321 19 330 7.02e-64 205
MsG0380017351.01.T01 AT4G26010 38.438 320 174 8 7 321 36 337 1.16e-63 205
MsG0380017351.01.T01 AT1G34510 37.299 311 176 6 16 321 13 309 1.71e-63 204
MsG0380017351.01.T01 AT4G16270 38.961 308 168 7 25 321 50 348 1.16e-62 202
MsG0380017351.01.T01 AT1G30870 39.535 301 172 5 25 321 51 345 1.53e-62 202
MsG0380017351.01.T01 AT4G08770 38.658 313 181 6 18 321 17 327 1.94e-62 202
MsG0380017351.01.T01 AT4G37530 41.985 262 137 5 22 273 24 280 2.56e-62 199
MsG0380017351.01.T01 AT1G49570 36.236 356 180 8 1 318 1 347 3.44e-62 201
MsG0380017351.01.T01 AT1G44970 40.453 309 175 5 20 321 40 346 3.66e-62 201
MsG0380017351.01.T01 AT2G35380 36.196 326 199 4 6 322 11 336 5.24e-62 201
MsG0380017351.01.T01 AT4G08780 38.658 313 181 6 18 321 17 327 7.52e-62 201
MsG0380017351.01.T01 AT5G05340 35.599 309 181 5 21 321 26 324 2.96e-61 198
MsG0380017351.01.T01 AT1G05240 37.013 308 175 7 25 321 26 325 4.57e-61 198
MsG0380017351.01.T01 AT1G05250 37.013 308 175 7 25 321 26 325 4.57e-61 198
MsG0380017351.01.T01 AT2G39040 39.806 309 170 8 25 321 46 350 1.02e-60 197
MsG0380017351.01.T01 AT5G19880 35.077 325 196 6 8 321 9 329 1.26e-60 197
MsG0380017351.01.T01 AT3G49110 39.073 302 173 6 29 321 37 336 2.65e-60 197
MsG0380017351.01.T01 AT1G24110 37.152 323 185 8 9 321 8 322 3.22e-60 196
MsG0380017351.01.T01 AT5G06730 36.957 322 190 7 8 321 18 334 3.70e-60 196
MsG0380017351.01.T01 AT5G40150 38.387 310 169 6 23 321 30 328 1.46e-59 194
MsG0380017351.01.T01 AT5G06720 36.957 322 190 6 8 321 17 333 3.16e-59 193
MsG0380017351.01.T01 AT3G28200 36.422 313 176 6 20 321 16 316 3.69e-59 192
MsG0380017351.01.T01 AT3G32980 36.741 313 186 6 19 321 24 334 8.18e-59 193
MsG0380017351.01.T01 AT5G58400 34.663 326 196 5 4 321 9 325 1.81e-58 191
MsG0380017351.01.T01 AT5G58390 36.218 312 182 5 18 321 14 316 1.23e-57 189
MsG0380017351.01.T01 AT3G49120 35.692 325 198 6 6 321 13 335 6.68e-57 188
MsG0380017351.01.T01 AT3G17070 35.974 303 179 5 25 317 38 335 1.35e-56 187
MsG0380017351.01.T01 AT4G21960 34.615 312 190 5 17 321 23 327 3.09e-56 186
MsG0380017351.01.T01 AT2G38390 35.202 321 198 6 9 321 15 333 1.62e-54 182
MsG0380017351.01.T01 AT5G22410 37.417 302 178 6 25 320 28 324 3.79e-54 180
MsG0380017351.01.T01 AT4G33870 33.433 335 182 6 23 318 66 398 1.34e-53 181
MsG0380017351.01.T01 AT1G68850 33.025 324 204 5 9 321 14 335 1.37e-53 179
MsG0380017351.01.T01 AT2G38380 34.891 321 199 6 9 321 15 333 2.10e-53 179
MsG0380017351.01.T01 AT2G22420 33.956 321 196 9 9 321 7 319 8.07e-52 174
MsG0380017351.01.T01 AT2G37130 35.331 317 186 7 14 321 21 327 2.67e-51 172
MsG0380017351.01.T01 AT2G37130 35.526 304 179 6 27 321 1 296 1.40e-50 170
MsG0380017351.01.T01 AT5G39580 49.689 161 80 1 29 189 29 188 3.51e-46 157
MsG0380017351.01.T01 AT4G25980 47.647 170 81 4 23 188 69 234 4.62e-45 155
MsG0380017351.01.T01 AT2G35380 36.885 244 149 3 84 322 5 248 8.44e-43 148
MsG0380017351.01.T01 AT3G17070 34.545 275 164 6 53 317 4 272 7.80e-41 144
MsG0380017351.01.T01 AT4G08390 28.000 200 116 8 114 307 186 363 1.61e-14 73.9
MsG0380017351.01.T01 AT4G08390 28.000 200 116 8 114 307 186 363 1.61e-14 73.9
MsG0380017351.01.T01 AT4G08390 28.000 200 116 8 114 307 186 363 1.61e-14 73.9
MsG0380017351.01.T01 AT4G08390 28.000 200 116 8 114 307 185 362 1.71e-14 73.9

Find 70 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGATCTTGTGGTTCTTTC+AGG 0.062320 3:-95264545 MsG0380017351.01.T01:intron
CAGCTCATTGCAACACATTC+AGG 0.242894 3:-95263915 MsG0380017351.01.T01:CDS
ACGGATGGTTGTGCATTTAT+TGG 0.252981 3:+95263802 None:intergenic
TCAAATAGCATAGACGTTTC+AGG 0.291753 3:+95263763 None:intergenic
GACTTCCATTTCTGTCTTGT+TGG 0.319000 3:+95263884 None:intergenic
ACCATGCGAAGGAGCTTTCC+AGG 0.352693 3:+95266158 None:intergenic
AAGTAAGGACAATCCTTTAC+TGG 0.356162 3:+95264565 None:intergenic
TCAAACGATCCTTCCATTCC+TGG 0.360199 3:-95266176 MsG0380017351.01.T01:CDS
CAAGAAGATTTCTGTAGTAT+TGG 0.379224 3:+95263737 None:intergenic
CTCAGTCTTTACCCCGATAC+TGG 0.391758 3:+95263585 None:intergenic
TCTGCACAAGAAACAGTTCC+TGG 0.392995 3:+95264841 None:intergenic
CATAATTAGTATCAATGGTT+TGG 0.404838 3:+95263848 None:intergenic
ATCAGCATAATTAGTATCAA+TGG 0.413882 3:+95263843 None:intergenic
GTTCTTGAGGTGTTCTGCCC+AGG 0.436046 3:-95264859 MsG0380017351.01.T01:CDS
GGGGATTCAGAAATAGTGCC+TGG 0.451814 3:+95266373 None:intergenic
AAACTAGTGTCCACAATGTT+GGG 0.456366 3:+95264617 None:intergenic
TTCGTAAAGCTAACCAGTAT+CGG 0.459764 3:-95263598 MsG0380017351.01.T01:CDS
TCGTAAAGCTAACCAGTATC+GGG 0.462963 3:-95263597 MsG0380017351.01.T01:CDS
CGTTTCCAACAAGACAGAAA+TGG 0.463042 3:-95263889 MsG0380017351.01.T01:CDS
TTTGCAGGGGCTCATACAAT+AGG 0.464251 3:-95263940 MsG0380017351.01.T01:intron
ATCCAGGAAATAGATCTGTT+GGG 0.465371 3:-95264912 MsG0380017351.01.T01:CDS
TAACCTCTACAAAGCAATCA+TGG 0.472084 3:+95266132 None:intergenic
AACTAAACGCTTGGTTCCCA+TGG 0.474859 3:-95266342 MsG0380017351.01.T01:exon
CTTATGATTAACTCTGCTGT+TGG 0.485784 3:+95266221 None:intergenic
TCCTGGAAAGCTCCTTCGCA+TGG 0.487831 3:-95266159 MsG0380017351.01.T01:CDS
CCTGTAGGAATCTGAACCCT+TGG 0.487984 3:+95264680 None:intergenic
AAAACTAGTGTCCACAATGT+TGG 0.491591 3:+95264616 None:intergenic
GCGAAGGAGCTTTCCAGGAA+TGG 0.495018 3:+95266163 None:intergenic
CCAAGGGTTCAGATTCCTAC+AGG 0.501809 3:-95264680 MsG0380017351.01.T01:CDS
TTTCCATGATTGCTTTGTAG+AGG 0.503451 3:-95266135 MsG0380017351.01.T01:intron
AATACAGAACAAAGTGATCC+AGG 0.505659 3:-95264928 MsG0380017351.01.T01:CDS
GATCCAGGAAATAGATCTGT+TGG 0.507049 3:-95264913 MsG0380017351.01.T01:CDS
ATTGTCCTTACTTGATCTTG+TGG 0.511927 3:-95264555 MsG0380017351.01.T01:CDS
TCTTGCTTGTCTATTCATAG+TGG 0.513428 3:-95263424 MsG0380017351.01.T01:three_prime_UTR
AAGAACCACAAGATCAAGTA+AGG 0.515531 3:+95264550 None:intergenic
AAATAGTGCCTGGAGTGTGC+AGG 0.532679 3:+95266383 None:intergenic
AGCTCATTGCAACACATTCA+GGG 0.538111 3:-95263914 MsG0380017351.01.T01:CDS
ATTCCTACAGGTAGGAGAGA+TGG 0.545064 3:-95264668 MsG0380017351.01.T01:CDS
TACAGGTAGGAGAGATGGAA+TGG 0.551892 3:-95264663 MsG0380017351.01.T01:CDS
TGAAACAGGCTGGTGGACCA+AGG 0.560284 3:-95264697 MsG0380017351.01.T01:intron
TCATCAAAACTGAATCAGAC+TGG 0.560337 3:+95263698 None:intergenic
AGGATCGATGTTCACTGCCA+CGG 0.580331 3:+95263783 None:intergenic
TCCAGGAAATAGATCTGTTG+GGG 0.586806 3:-95264911 MsG0380017351.01.T01:CDS
TCGATGTTCACTGCCACGGA+TGG 0.590989 3:+95263787 None:intergenic
ATTCCATCTCTCCTACCTGT+AGG 0.594277 3:+95264665 None:intergenic
AGGAGCTTTCCAGGAATGGA+AGG 0.600921 3:+95266167 None:intergenic
GATGCATCTTTGATGCTACA+AGG 0.603118 3:-95264955 MsG0380017351.01.T01:CDS
AGCAAGATTAGAAGTTACAG+AGG 0.604742 3:+95266268 None:intergenic
AACAGCTAAAAGAGTTCTTG+AGG 0.607173 3:-95264872 MsG0380017351.01.T01:CDS
GAAACAGGCTGGTGGACCAA+GGG 0.608211 3:-95264696 MsG0380017351.01.T01:intron
CGCTTTGTGAAACAGGCTGG+TGG 0.609729 3:-95264704 MsG0380017351.01.T01:intron
CTGCACAAGAAACAGTTCCT+GGG 0.613867 3:+95264842 None:intergenic
TGATAGCACGAGGAAGCTAG+TGG 0.616101 3:-95263671 MsG0380017351.01.T01:CDS
AATAAATGCACAACCATCCG+TGG 0.629289 3:-95263800 MsG0380017351.01.T01:CDS
AATGGAAGGATCGTTTGAAG+AGG 0.631778 3:+95266181 None:intergenic
AAATGTTAGACCCAACATTG+TGG 0.635934 3:-95264627 MsG0380017351.01.T01:CDS
ATCGGGGTAAAGACTGAGGA+GGG 0.637032 3:-95263580 MsG0380017351.01.T01:CDS
AATCATGGAAAACCATGCGA+AGG 0.639071 3:+95266147 None:intergenic
ACAAACAAAATCATGTACAA+AGG 0.640192 3:+95263476 None:intergenic
AATAGTGCCTGGAGTGTGCA+GGG 0.651716 3:+95266384 None:intergenic
TATCGGGGTAAAGACTGAGG+AGG 0.659570 3:-95263581 MsG0380017351.01.T01:CDS
CGTAAAGCTAACCAGTATCG+GGG 0.667609 3:-95263596 MsG0380017351.01.T01:CDS
GCTCATTGCAACACATTCAG+GGG 0.678269 3:-95263913 MsG0380017351.01.T01:CDS
GGGTTCAGATTCCTACAGGT+AGG 0.678330 3:-95264676 MsG0380017351.01.T01:CDS
ATGCATCTTTGATGCTACAA+GGG 0.681664 3:-95264954 MsG0380017351.01.T01:CDS
CAGTATCGGGGTAAAGACTG+AGG 0.702027 3:-95263584 MsG0380017351.01.T01:CDS
TAGCACGAGGAAGCTAGTGG+AGG 0.707430 3:-95263668 MsG0380017351.01.T01:CDS
ATAACATCAAAGAATTGACA+AGG 0.708249 3:+95263446 None:intergenic
TGATGAACGATGATAGCACG+AGG 0.718494 3:-95263681 MsG0380017351.01.T01:CDS
CCAGGAAATAGATCTGTTGG+GGG 0.740691 3:-95264910 MsG0380017351.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTATAAAAGAATAAAAA+TGG - Chr3:95266292-95266311 MsG0380017351.01.T01:CDS 10.0%
!!! CTCTAAAATTATTCATATTA+CGG - Chr3:95264302-95264321 MsG0380017351.01.T01:intron 15.0%
!! AATAATCTTATTGCATCAAA+AGG + Chr3:95264824-95264843 None:intergenic 20.0%
!! AATTAGATGTGAAATCAAAT+CGG + Chr3:95264415-95264434 None:intergenic 20.0%
!! CAAAATTTAGAAAGAGAAAT+AGG + Chr3:95265737-95265756 None:intergenic 20.0%
!! TATAAACTACTAGATATATG+TGG + Chr3:95265611-95265630 None:intergenic 20.0%
!!! AAGATTATTATTTGAAATGC+AGG - Chr3:95264835-95264854 MsG0380017351.01.T01:CDS 20.0%
!!! AGATTATTATTTGAAATGCA+GGG - Chr3:95264836-95264855 MsG0380017351.01.T01:CDS 20.0%
!!! ATATTTTTGTCTAATACACT+TGG + Chr3:95265770-95265789 None:intergenic 20.0%
!!! CCAACTAATGTTTTAAAAAT+TGG + Chr3:95265714-95265733 None:intergenic 20.0%
!!! CCAATTTTTAAAACATTAGT+TGG - Chr3:95265711-95265730 MsG0380017351.01.T01:intron 20.0%
!!! CGTAATATGAATAATTTTAG+AGG + Chr3:95264304-95264323 None:intergenic 20.0%
!!! CTATTTCTCTTTCTAAATTT+TGG - Chr3:95265735-95265754 MsG0380017351.01.T01:intron 20.0%
!!! TAATGTTTTAAAAATTGGAC+CGG + Chr3:95265709-95265728 None:intergenic 20.0%
!!! TGTATAAATAGTTGACATTT+TGG + Chr3:95264516-95264535 None:intergenic 20.0%
! ACAAACAAAATCATGTACAA+AGG + Chr3:95266345-95266364 None:intergenic 25.0%
! ACTTGATGTGAAATTCAAAT+TGG - Chr3:95263935-95263954 MsG0380017351.01.T01:CDS 25.0%
! ATAACATCAAAGAATTGACA+AGG + Chr3:95266375-95266394 None:intergenic 25.0%
! ATCAGCATAATTAGTATCAA+TGG + Chr3:95265978-95265997 None:intergenic 25.0%
! ATTAGATGTGAAATCAAATC+GGG + Chr3:95264414-95264433 None:intergenic 25.0%
! CATAATTAGTATCAATGGTT+TGG + Chr3:95265973-95265992 None:intergenic 25.0%
! TTTACCATATCAGATATATG+TGG + Chr3:95265565-95265584 None:intergenic 25.0%
!! AAGAACTTTTCTTTGACAAT+TGG - Chr3:95266188-95266207 MsG0380017351.01.T01:CDS 25.0%
!! AGAACTTTTCTTTGACAATT+GGG - Chr3:95266189-95266208 MsG0380017351.01.T01:CDS 25.0%
!! ATCACAAATTATTTCTCTCT+TGG + Chr3:95264476-95264495 None:intergenic 25.0%
!! GATTTTATATTGGTCAAACT+CGG + Chr3:95266420-95266439 None:intergenic 25.0%
!!! AAGCGTTTAGTTCTTTTTTT+GGG + Chr3:95263468-95263487 None:intergenic 25.0%
!!! ACCAAAATGTGTTACTTTAT+GGG + Chr3:95265396-95265415 None:intergenic 25.0%
!!! ATAAAGTAACACATTTTGGT+CGG - Chr3:95265396-95265415 MsG0380017351.01.T01:intron 25.0%
!!! TTTTCTGAATATTTTGAGTC+CGG - Chr3:95265687-95265706 MsG0380017351.01.T01:intron 25.0%
AACTACTAGATATATGTGGA+TGG + Chr3:95265607-95265626 None:intergenic 30.0%
ACATGTTTATGTCTGATTGA+AGG + Chr3:95265070-95265089 None:intergenic 30.0%
ACTAATAGTTAAGCTTTGCA+GGG - Chr3:95265864-95265883 MsG0380017351.01.T01:intron 30.0%
AGATATATGACGATAAGTGT+GGG - Chr3:95264450-95264469 MsG0380017351.01.T01:intron 30.0%
CAAAAAAAGAACTAAACGCT+TGG - Chr3:95263467-95263486 MsG0380017351.01.T01:three_prime_UTR 30.0%
CAAGAAGATTTCTGTAGTAT+TGG + Chr3:95266084-95266103 None:intergenic 30.0%
CATAAGCTCTCTTATGAAAA+CGG - Chr3:95263805-95263824 MsG0380017351.01.T01:CDS 30.0%
CTAAAAATAGCTTATGCACA+TGG + Chr3:95263777-95263796 None:intergenic 30.0%
TAAAAATGGTGTAGCATCAA+AGG - Chr3:95266306-95266325 MsG0380017351.01.T01:CDS 30.0%
TACTAATAGTTAAGCTTTGC+AGG - Chr3:95265863-95265882 MsG0380017351.01.T01:intron 30.0%
TGAACGATGATTATAGTTGA+AGG - Chr3:95265528-95265547 MsG0380017351.01.T01:intron 30.0%
TTAGATGTGAAATCAAATCG+GGG + Chr3:95264413-95264432 None:intergenic 30.0%
! AGATAGTGAGGTATCATAAT+CGG - Chr3:95264754-95264773 MsG0380017351.01.T01:intron 30.0%
! ATCCAGGATTTTTGAATAGT+GGG - Chr3:95264241-95264260 MsG0380017351.01.T01:intron 30.0%
! CAGACATAAACATGTCTTTT+TGG - Chr3:95265075-95265094 MsG0380017351.01.T01:intron 30.0%
! GAACTTTTCTTTGACAATTG+GGG - Chr3:95266190-95266209 MsG0380017351.01.T01:CDS 30.0%
! GGATAATATAAGAAGTGCAA+TGG + Chr3:95265049-95265068 None:intergenic 30.0%
! TCCCATAAAGTAACACATTT+TGG - Chr3:95265392-95265411 MsG0380017351.01.T01:intron 30.0%
! TGTTTCTAAAAACTCTGTGT+GGG - Chr3:95264554-95264573 MsG0380017351.01.T01:CDS 30.0%
!! ATTGATTTTCTTGTCTCCAT+GGG + Chr3:95263495-95263514 None:intergenic 30.0%
!! GACCAAAATGTGTTACTTTA+TGG + Chr3:95265397-95265416 None:intergenic 30.0%
!! TTGTTTCTAAAAACTCTGTG+TGG - Chr3:95264553-95264572 MsG0380017351.01.T01:CDS 30.0%
!!! AGCGTTTAGTTCTTTTTTTG+GGG + Chr3:95263467-95263486 None:intergenic 30.0%
!!! ATATGTTTTGGTTCTAAGTG+TGG - Chr3:95264007-95264026 MsG0380017351.01.T01:intron 30.0%
!!! CAAGCGTTTAGTTCTTTTTT+TGG + Chr3:95263469-95263488 None:intergenic 30.0%
!!! TATGTTTTGGTTCTAAGTGT+GGG - Chr3:95264008-95264027 MsG0380017351.01.T01:intron 30.0%
AAAACTAGTGTCCACAATGT+TGG + Chr3:95265205-95265224 None:intergenic 35.0%
AAACTAGTGTCCACAATGTT+GGG + Chr3:95265204-95265223 None:intergenic 35.0%
AAATGTTAGACCCAACATTG+TGG - Chr3:95265191-95265210 MsG0380017351.01.T01:intron 35.0%
AACAGCTAAAAGAGTTCTTG+AGG - Chr3:95264946-95264965 MsG0380017351.01.T01:CDS 35.0%
AAGAACCACAAGATCAAGTA+AGG + Chr3:95265271-95265290 None:intergenic 35.0%
AAGTAAGGACAATCCTTTAC+TGG + Chr3:95265256-95265275 None:intergenic 35.0%
AATACAGAACAAAGTGATCC+AGG - Chr3:95264890-95264909 MsG0380017351.01.T01:CDS 35.0%
AGCAAGATTAGAAGTTACAG+AGG + Chr3:95263553-95263572 None:intergenic 35.0%
ATCCAGGAAATAGATCTGTT+GGG - Chr3:95264906-95264925 MsG0380017351.01.T01:CDS 35.0%
ATGCATCTTTGATGCTACAA+GGG - Chr3:95264864-95264883 MsG0380017351.01.T01:CDS 35.0%
ATGCATGCTATAGAGTTTGT+GGG + Chr3:95264586-95264605 None:intergenic 35.0%
ATTGTCCTTACTTGATCTTG+TGG - Chr3:95265263-95265282 MsG0380017351.01.T01:intron 35.0%
CAGTCCACATATATCTGATA+TGG - Chr3:95265558-95265577 MsG0380017351.01.T01:intron 35.0%
CTAATAGTTAAGCTTTGCAG+GGG - Chr3:95265865-95265884 MsG0380017351.01.T01:intron 35.0%
CTTATGATTAACTCTGCTGT+TGG + Chr3:95263600-95263619 None:intergenic 35.0%
GAACCAAAACATATGATGCA+TGG + Chr3:95264001-95264020 None:intergenic 35.0%
GAGATATATGACGATAAGTG+TGG - Chr3:95264449-95264468 MsG0380017351.01.T01:intron 35.0%
TAACCTCTACAAAGCAATCA+TGG + Chr3:95263689-95263708 None:intergenic 35.0%
TCAAATAGCATAGACGTTTC+AGG + Chr3:95266058-95266077 None:intergenic 35.0%
TCATCAAAACTGAATCAGAC+TGG + Chr3:95266123-95266142 None:intergenic 35.0%
TCTTGCTTGTCTATTCATAG+TGG - Chr3:95266394-95266413 MsG0380017351.01.T01:five_prime_UTR 35.0%
TGACTTAGATAGTGCTTGTA+AGG - Chr3:95264071-95264090 MsG0380017351.01.T01:intron 35.0%
TGTCAAATACCGACAAGTAT+TGG + Chr3:95264629-95264648 None:intergenic 35.0%
TTAGTGCTTCATAGATAGTG+AGG - Chr3:95264742-95264761 MsG0380017351.01.T01:intron 35.0%
TTCGTAAAGCTAACCAGTAT+CGG - Chr3:95266220-95266239 MsG0380017351.01.T01:CDS 35.0%
TTTCCATGATTGCTTTGTAG+AGG - Chr3:95263683-95263702 MsG0380017351.01.T01:CDS 35.0%
! ACAAAATGACTTGCAAGATC+CGG + Chr3:95264107-95264126 None:intergenic 35.0%
! AGTCCATGCATCATATGTTT+TGG - Chr3:95263995-95264014 MsG0380017351.01.T01:intron 35.0%
! ATATGATGCATGGACTAACT+CGG + Chr3:95263991-95264010 None:intergenic 35.0%
! ATCAGATATATGTGGACTGA+GGG + Chr3:95265557-95265576 None:intergenic 35.0%
! CGTTTTCATAAGAGAGCTTA+TGG + Chr3:95263807-95263826 None:intergenic 35.0%
! CTTAAGCTCTTTTCCAGTAA+AGG - Chr3:95265240-95265259 MsG0380017351.01.T01:intron 35.0%
! GATCCAGGATTTTTGAATAG+TGG - Chr3:95264240-95264259 MsG0380017351.01.T01:intron 35.0%
! TATCAGATATATGTGGACTG+AGG + Chr3:95265558-95265577 None:intergenic 35.0%
! TCCAGGATTTTTGAATAGTG+GGG - Chr3:95264242-95264261 MsG0380017351.01.T01:intron 35.0%
!! GATCTTGCAAGTCATTTTGT+AGG - Chr3:95264107-95264126 MsG0380017351.01.T01:intron 35.0%
!! TATTCAGAAAACCGACTTGA+AGG + Chr3:95265678-95265697 None:intergenic 35.0%
!! TCACATCAAGTAGTCTTGTT+TGG + Chr3:95263926-95263945 None:intergenic 35.0%
!! TGAAGTTTTGATGACCTTAG+AGG - Chr3:95264164-95264183 MsG0380017351.01.T01:intron 35.0%
!!! ATGTTTTGGTTCTAAGTGTG+GGG - Chr3:95264009-95264028 MsG0380017351.01.T01:intron 35.0%
!!! CACTGCACTTTTTTTTACAC+TGG - Chr3:95264778-95264797 MsG0380017351.01.T01:intron 35.0%
!!! CATTGATTTTCTTGTCTCCA+TGG + Chr3:95263496-95263515 None:intergenic 35.0%
!!! TGTGGACACTAGTTTTACTA+TGG - Chr3:95265209-95265228 MsG0380017351.01.T01:intron 35.0%
AATAAATGCACAACCATCCG+TGG - Chr3:95266018-95266037 MsG0380017351.01.T01:intron 40.0%
AATCATGGAAAACCATGCGA+AGG + Chr3:95263674-95263693 None:intergenic 40.0%
AATGGAAGGATCGTTTGAAG+AGG + Chr3:95263640-95263659 None:intergenic 40.0%
ACCAAGCAAATGACATTCTG+TGG - Chr3:95263729-95263748 MsG0380017351.01.T01:CDS 40.0%
ACGGATGGTTGTGCATTTAT+TGG + Chr3:95266019-95266038 None:intergenic 40.0%
ACTATTGCATGCAACCTCTA+AGG + Chr3:95264181-95264200 None:intergenic 40.0%
AGCTCATTGCAACACATTCA+GGG - Chr3:95265904-95265923 MsG0380017351.01.T01:intron 40.0%
ATATATGTGGATGGCGCAAT+AGG + Chr3:95265598-95265617 None:intergenic 40.0%
CATGACACTGAAGTTGACAT+TGG + Chr3:95264707-95264726 None:intergenic 40.0%
CCAAGCAAATGACATTCTGT+GGG - Chr3:95263730-95263749 MsG0380017351.01.T01:CDS 40.0%
CGTTTCCAACAAGACAGAAA+TGG - Chr3:95265929-95265948 MsG0380017351.01.T01:intron 40.0%
CTAGTGCTATGTTCAAGTCT+TGG + Chr3:95265351-95265370 None:intergenic 40.0%
CTTGATCTTGTGGTTCTTTC+AGG - Chr3:95265273-95265292 MsG0380017351.01.T01:intron 40.0%
GACTTCCATTTCTGTCTTGT+TGG + Chr3:95265937-95265956 None:intergenic 40.0%
GATCCAGGAAATAGATCTGT+TGG - Chr3:95264905-95264924 MsG0380017351.01.T01:CDS 40.0%
GATGCATCTTTGATGCTACA+AGG - Chr3:95264863-95264882 MsG0380017351.01.T01:CDS 40.0%
GATGCATGCTATAGAGTTTG+TGG + Chr3:95264587-95264606 None:intergenic 40.0%
GTACTCTCAACATGTCAAGA+TGG + Chr3:95265486-95265505 None:intergenic 40.0%
GTTGAGTGTCCAATACTTGT+CGG - Chr3:95264617-95264636 MsG0380017351.01.T01:CDS 40.0%
TCCAGGAAATAGATCTGTTG+GGG - Chr3:95264907-95264926 MsG0380017351.01.T01:CDS 40.0%
TCGTAAAGCTAACCAGTATC+GGG - Chr3:95266221-95266240 MsG0380017351.01.T01:CDS 40.0%
TGAAAGACGCTTTGTGAAAC+AGG - Chr3:95265107-95265126 MsG0380017351.01.T01:intron 40.0%
! CCAGGATTTTTGAATAGTGG+GGG - Chr3:95264243-95264262 MsG0380017351.01.T01:intron 40.0%
!! ACATGTTGAGAGTACTACGT+TGG - Chr3:95265491-95265510 MsG0380017351.01.T01:intron 40.0%
AACTAAACGCTTGGTTCCCA+TGG - Chr3:95263476-95263495 MsG0380017351.01.T01:three_prime_UTR 45.0%
ATTCCATCTCTCCTACCTGT+AGG + Chr3:95265156-95265175 None:intergenic 45.0%
ATTCCTACAGGTAGGAGAGA+TGG - Chr3:95265150-95265169 MsG0380017351.01.T01:intron 45.0%
CACTGCTCAACACATCGTAT+TGG + Chr3:95264217-95264236 None:intergenic 45.0%
CAGCTCATTGCAACACATTC+AGG - Chr3:95265903-95265922 MsG0380017351.01.T01:intron 45.0%
CCAGGAAATAGATCTGTTGG+GGG - Chr3:95264908-95264927 MsG0380017351.01.T01:CDS 45.0%
CCCCCACTATTCAAAAATCC+TGG + Chr3:95264246-95264265 None:intergenic 45.0%
CGTAAAGCTAACCAGTATCG+GGG - Chr3:95266222-95266241 MsG0380017351.01.T01:CDS 45.0%
CTGCACAAGAAACAGTTCCT+GGG + Chr3:95264979-95264998 None:intergenic 45.0%
CTTGTAAGGTTTGAGCAGTC+CGG - Chr3:95264085-95264104 MsG0380017351.01.T01:intron 45.0%
GAAATCAAATCGGGGATGAC+TGG + Chr3:95264405-95264424 None:intergenic 45.0%
GCTCATTGCAACACATTCAG+GGG - Chr3:95265905-95265924 MsG0380017351.01.T01:intron 45.0%
GTATTGGACACTCAACACCA+GGG + Chr3:95264613-95264632 None:intergenic 45.0%
TACAGGTAGGAGAGATGGAA+TGG - Chr3:95265155-95265174 MsG0380017351.01.T01:intron 45.0%
TACGATGTGTTGAGCAGTGA+CGG - Chr3:95264218-95264237 MsG0380017351.01.T01:intron 45.0%
TCAAACGATCCTTCCATTCC+TGG - Chr3:95263642-95263661 MsG0380017351.01.T01:CDS 45.0%
TCTGCACAAGAAACAGTTCC+TGG + Chr3:95264980-95264999 None:intergenic 45.0%
TGATGAACGATGATAGCACG+AGG - Chr3:95266137-95266156 MsG0380017351.01.T01:CDS 45.0%
TGCTCAACACATCGTATTGG+TGG + Chr3:95264214-95264233 None:intergenic 45.0%
TTTGCAGGGGCTCATACAAT+AGG - Chr3:95265878-95265897 MsG0380017351.01.T01:intron 45.0%
! AGTATTGGACACTCAACACC+AGG + Chr3:95264614-95264633 None:intergenic 45.0%
! CCCACAGAATGTCATTTGCT+TGG + Chr3:95263733-95263752 None:intergenic 45.0%
! TCTGGCTTGAGGAATGTGTT+GGG - Chr3:95265649-95265668 MsG0380017351.01.T01:intron 45.0%
AAAAACACCCTGCACACTCC+AGG - Chr3:95263427-95263446 MsG0380017351.01.T01:three_prime_UTR 50.0%
AAATAGTGCCTGGAGTGTGC+AGG + Chr3:95263438-95263457 None:intergenic 50.0%
AATAGTGCCTGGAGTGTGCA+GGG + Chr3:95263437-95263456 None:intergenic 50.0%
ACACTGACACGACATGCATG+TGG - Chr3:95264646-95264665 MsG0380017351.01.T01:CDS 50.0%
AGACGCTTTGTGAAACAGGC+TGG - Chr3:95265111-95265130 MsG0380017351.01.T01:intron 50.0%
AGGAGCTTTCCAGGAATGGA+AGG + Chr3:95263654-95263673 None:intergenic 50.0%
AGGATCGATGTTCACTGCCA+CGG + Chr3:95266038-95266057 None:intergenic 50.0%
ATCGGGGTAAAGACTGAGGA+GGG - Chr3:95266238-95266257 MsG0380017351.01.T01:CDS 50.0%
CAAGCCAGAGACTAGACATC+TGG + Chr3:95265638-95265657 None:intergenic 50.0%
CACTCCAGATGTCTAGTCTC+TGG - Chr3:95265631-95265650 MsG0380017351.01.T01:intron 50.0%
CCAAGGGTTCAGATTCCTAC+AGG - Chr3:95265138-95265157 MsG0380017351.01.T01:intron 50.0%
CCCCCAACAGATCTATTTCC+TGG + Chr3:95264911-95264930 None:intergenic 50.0%
CCTGTAGGAATCTGAACCCT+TGG + Chr3:95265141-95265160 None:intergenic 50.0%
CTCAGTCTTTACCCCGATAC+TGG + Chr3:95266236-95266255 None:intergenic 50.0%
GGGGATTCAGAAATAGTGCC+TGG + Chr3:95263448-95263467 None:intergenic 50.0%
GGGTTCAGATTCCTACAGGT+AGG - Chr3:95265142-95265161 MsG0380017351.01.T01:intron 50.0%
GTGTTGGGAGTCCTTCAAGT+CGG - Chr3:95265664-95265683 MsG0380017351.01.T01:intron 50.0%
TATCGGGGTAAAGACTGAGG+AGG - Chr3:95266237-95266256 MsG0380017351.01.T01:CDS 50.0%
TGATAGCACGAGGAAGCTAG+TGG - Chr3:95266147-95266166 MsG0380017351.01.T01:CDS 50.0%
! CAGTATCGGGGTAAAGACTG+AGG - Chr3:95266234-95266253 MsG0380017351.01.T01:CDS 50.0%
! CTCTGGCTTGAGGAATGTGT+TGG - Chr3:95265648-95265667 MsG0380017351.01.T01:intron 50.0%
! GATGTCTAGTCTCTGGCTTG+AGG - Chr3:95265638-95265657 MsG0380017351.01.T01:intron 50.0%
! TGATGCATGGACTAACTCGG+AGG + Chr3:95263988-95264007 None:intergenic 50.0%
ACCATGCGAAGGAGCTTTCC+AGG + Chr3:95263663-95263682 None:intergenic 55.0%
CGCTTTGTGAAACAGGCTGG+TGG - Chr3:95265114-95265133 MsG0380017351.01.T01:intron 55.0%
CTATAGCATGCATCCGTCCC+TGG - Chr3:95264593-95264612 MsG0380017351.01.T01:CDS 55.0%
GCGAAGGAGCTTTCCAGGAA+TGG + Chr3:95263658-95263677 None:intergenic 55.0%
TAGCACGAGGAAGCTAGTGG+AGG - Chr3:95266150-95266169 MsG0380017351.01.T01:CDS 55.0%
TCCTGGAAAGCTCCTTCGCA+TGG - Chr3:95263659-95263678 MsG0380017351.01.T01:CDS 55.0%
TCGATGTTCACTGCCACGGA+TGG + Chr3:95266034-95266053 None:intergenic 55.0%
TGGACACTCAACACCAGGGA+CGG + Chr3:95264609-95264628 None:intergenic 55.0%
! GAAACAGGCTGGTGGACCAA+GGG - Chr3:95265122-95265141 MsG0380017351.01.T01:intron 55.0%
! GTTCTTGAGGTGTTCTGCCC+AGG - Chr3:95264959-95264978 MsG0380017351.01.T01:CDS 55.0%
! TGAAACAGGCTGGTGGACCA+AGG - Chr3:95265121-95265140 MsG0380017351.01.T01:intron 55.0%
!! TGTTGAGCAGTGACGGATCC+AGG - Chr3:95264225-95264244 MsG0380017351.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr3 gene 95263398 95266442 95263398 ID=MsG0380017351.01;Name=MsG0380017351.01
Chr3 mRNA 95263398 95266442 95263398 ID=MsG0380017351.01.T01;Parent=MsG0380017351.01;Name=MsG0380017351.01.T01;_AED=0.49;_eAED=0.49;_QI=97|1|1|1|1|1|4|142|323
Chr3 exon 95263398 95263955 95263398 ID=MsG0380017351.01.T01:exon:17402;Parent=MsG0380017351.01.T01
Chr3 exon 95264546 95264711 95264546 ID=MsG0380017351.01.T01:exon:17401;Parent=MsG0380017351.01.T01
Chr3 exon 95264804 95264983 95264804 ID=MsG0380017351.01.T01:exon:17400;Parent=MsG0380017351.01.T01
Chr3 exon 95266136 95266442 95266136 ID=MsG0380017351.01.T01:exon:17399;Parent=MsG0380017351.01.T01
Chr3 five_prime_UTR 95266346 95266442 95266346 ID=MsG0380017351.01.T01:five_prime_utr;Parent=MsG0380017351.01.T01
Chr3 CDS 95266136 95266345 95266136 ID=MsG0380017351.01.T01:cds;Parent=MsG0380017351.01.T01
Chr3 CDS 95264804 95264983 95264804 ID=MsG0380017351.01.T01:cds;Parent=MsG0380017351.01.T01
Chr3 CDS 95264546 95264711 95264546 ID=MsG0380017351.01.T01:cds;Parent=MsG0380017351.01.T01
Chr3 CDS 95263540 95263955 95263540 ID=MsG0380017351.01.T01:cds;Parent=MsG0380017351.01.T01
Chr3 three_prime_UTR 95263398 95263539 95263398 ID=MsG0380017351.01.T01:three_prime_utr;Parent=MsG0380017351.01.T01
Gene Sequence

>MsG0380017351.01.T01

ATGGAGACAAGAAAATCAATGTTTCTTTTCATAGCAGTTTCTATCTTTTCTGTTTCCTCTGTAACTTCTAATCTTGCTTTCGACTTCTATGCTGCTTCATGTCCAACAGCAGAGTTAATCATAAGAAATGCAGTTAGTACATCCTCTTCAAACGATCCTTCCATTCCTGGAAAGCTCCTTCGCATGGTTTTCCATGATTGCTTTGTAGAGGGATGTGATGCATCTTTGATGCTACAAGGGAATAATACAGAACAAAGTGATCCAGGAAATAGATCTGTTGGGGGATTTTCTGTTATAGAAACAGCTAAAAGAGTTCTTGAGGTGTTCTGCCCAGGAACTGTTTCTTGTGCAGACATAATTGCTCTAGCAGCTAGAGATGCAGTTGAAATTGCTGGTGGACCAAGGGTTCAGATTCCTACAGGTAGGAGAGATGGAATGGTTTCAATTGCTTCAAATGTTAGACCCAACATTGTGGACACTAGTTTTACTATGGATGAGATGCTTAAGCTCTTTTCCAGTAAAGGATTGTCCTTACTTGATCTTGTGGTTCTTTCAGGGGCTCATACAATAGGAACAGCTCATTGCAACACATTCAGGGGTCGTTTCCAACAAGACAGAAATGGAAGTCTTAAGCTCATTGACCAAACCATTGATACTAATTATGCTGATCAGCTAATAAAACAGTGTCCAATAAATGCACAACCATCCGTGGCAGTGAACATCGATCCTGAAACGTCTATGCTATTTGACAACCAATACTACAGAAATCTTCTTGATCGCAAAGTTCTGTTCCAGTCTGATTCAGTTTTGATGAACGATGATAGCACGAGGAAGCTAGTGGAGGATTTTGCAAATGATCAAGAACTTTTCTTTGACAATTGGGGTGTGTCATTCGTAAAGCTAACCAGTATCGGGGTAAAGACTGAGGAGGGTGAAATTCGACGTTCTTGTGCTGCAACTAATATTGTATAA

Protein sequence

>MsG0380017351.01.T01

METRKSMFLFIAVSIFSVSSVTSNLAFDFYAASCPTAELIIRNAVSTSSSNDPSIPGKLLRMVFHDCFVEGCDASLMLQGNNTEQSDPGNRSVGGFSVIETAKRVLEVFCPGTVSCADIIALAARDAVEIAGGPRVQIPTGRRDGMVSIASNVRPNIVDTSFTMDEMLKLFSSKGLSLLDLVVLSGAHTIGTAHCNTFRGRFQQDRNGSLKLIDQTIDTNYADQLIKQCPINAQPSVAVNIDPETSMLFDNQYYRNLLDRKVLFQSDSVLMNDDSTRKLVEDFANDQELFFDNWGVSFVKLTSIGVKTEEGEIRRSCAATNIV*