AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024758.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024758.01.T01 MTR_5g016010 97.256 328 9 0 1 328 1 328 0.0 659
MsG0580024758.01.T01 MTR_4g095450 71.037 328 90 1 1 328 1 323 2.74e-177 494
MsG0580024758.01.T01 MTR_4g127670 67.442 301 95 2 26 326 23 320 6.47e-152 429
MsG0580024758.01.T01 MTR_1g009750 61.321 318 119 3 12 328 13 327 7.73e-143 407
MsG0580024758.01.T01 MTR_7g029030 57.492 327 128 5 1 326 1 317 8.34e-129 370
MsG0580024758.01.T01 MTR_1g009750 56.289 318 118 4 12 328 13 310 1.68e-126 364
MsG0580024758.01.T01 MTR_8g062780 44.099 322 176 3 6 325 1 320 2.47e-90 273
MsG0580024758.01.T01 MTR_0286s0010 42.812 320 177 4 11 328 18 333 1.28e-84 259
MsG0580024758.01.T01 MTR_6g008075 42.812 320 177 4 11 328 18 333 1.28e-84 259
MsG0580024758.01.T01 MTR_3g092990 42.947 319 178 3 11 328 10 325 2.67e-84 258
MsG0580024758.01.T01 MTR_1g090760 41.745 321 178 5 10 325 10 326 1.94e-83 256
MsG0580024758.01.T01 MTR_4g087965 42.484 306 170 4 26 327 41 344 5.18e-81 250
MsG0580024758.01.T01 MTR_1g101830 42.679 321 172 8 10 328 11 321 3.78e-80 247
MsG0580024758.01.T01 MTR_2g029815 41.141 333 187 5 1 328 1 329 1.22e-78 244
MsG0580024758.01.T01 MTR_5g022870 41.846 325 174 7 7 328 3 315 3.90e-78 241
MsG0580024758.01.T01 MTR_2g029860 41.456 316 179 4 16 328 17 329 1.08e-77 241
MsG0580024758.01.T01 MTR_2g029820 41.141 333 187 5 1 328 1 329 2.93e-77 241
MsG0580024758.01.T01 MTR_2g029850 40.841 333 188 5 1 328 1 329 3.95e-77 240
MsG0580024758.01.T01 MTR_1g025980 40.303 330 176 7 1 328 7 317 2.20e-76 237
MsG0580024758.01.T01 MTR_8g075100 42.857 308 163 5 23 328 22 318 2.22e-76 237
MsG0580024758.01.T01 MTR_1g077000 39.521 334 182 7 1 328 7 326 6.37e-75 234
MsG0580024758.01.T01 MTR_3g092990 41.693 319 171 5 11 328 10 314 1.04e-74 233
MsG0580024758.01.T01 MTR_2g088770 40.694 317 181 5 14 328 13 324 1.78e-74 233
MsG0580024758.01.T01 MTR_2g029800 39.157 332 195 4 1 328 1 329 3.06e-74 233
MsG0580024758.01.T01 MTR_2g084020 38.906 329 188 5 1 328 1 317 1.82e-73 229
MsG0580024758.01.T01 MTR_4g046713 40.752 319 184 2 11 328 11 325 3.34e-73 229
MsG0580024758.01.T01 MTR_2g029750 39.339 333 193 6 1 328 1 329 3.57e-73 230
MsG0580024758.01.T01 MTR_2g084010 39.210 329 187 5 1 328 1 317 3.76e-73 229
MsG0580024758.01.T01 MTR_2g084090 40.248 323 175 7 12 328 7 317 5.14e-73 228
MsG0580024758.01.T01 MTR_7g107520 40.979 327 183 7 3 328 2 319 1.66e-72 227
MsG0580024758.01.T01 MTR_2g029830 41.100 309 175 4 23 328 24 328 8.29e-72 226
MsG0580024758.01.T01 MTR_2g029740 38.438 333 196 6 1 328 1 329 9.85e-72 226
MsG0580024758.01.T01 MTR_4g114210 40.673 327 177 7 7 326 1 317 1.05e-71 225
MsG0580024758.01.T01 MTR_2g084080 38.245 319 186 4 11 328 8 316 4.77e-71 223
MsG0580024758.01.T01 MTR_2g028980 41.100 309 175 5 23 328 25 329 7.72e-71 224
MsG0580024758.01.T01 MTR_2g040000 38.141 312 183 4 22 328 24 330 8.45e-71 223
MsG0580024758.01.T01 MTR_4g125940 39.130 322 187 4 11 328 12 328 1.21e-70 223
MsG0580024758.01.T01 MTR_2g084110 38.438 320 184 4 12 328 7 316 2.74e-70 221
MsG0580024758.01.T01 MTR_7g093370 39.319 323 184 6 7 325 53 367 3.46e-70 223
MsG0580024758.01.T01 MTR_1g086320 39.645 338 188 8 1 328 1 332 4.48e-70 221
MsG0580024758.01.T01 MTR_8g076820 39.297 313 182 4 21 328 20 329 8.14e-70 221
MsG0580024758.01.T01 MTR_7g072510 37.578 322 187 4 7 328 4 311 1.17e-69 219
MsG0580024758.01.T01 MTR_3g094650 38.485 330 186 7 1 325 1 318 1.19e-69 220
MsG0580024758.01.T01 MTR_2g029560 38.438 333 191 8 1 328 1 324 2.58e-69 220
MsG0580024758.01.T01 MTR_4g133800 39.799 299 168 6 31 328 45 332 4.48e-69 219
MsG0580024758.01.T01 MTR_1g086490 39.420 345 186 8 1 328 1 339 1.12e-68 218
MsG0580024758.01.T01 MTR_2g029910 40.120 334 188 8 2 328 3 331 1.51e-68 218
MsG0580024758.01.T01 MTR_2g029730 37.764 331 197 5 1 328 1 325 2.76e-68 217
MsG0580024758.01.T01 MTR_1g038680 40.461 304 168 8 32 328 34 331 3.43e-68 216
MsG0580024758.01.T01 MTR_7g072480 38.344 326 189 4 4 328 1 315 3.86e-68 216
MsG0580024758.01.T01 MTR_4g031140 37.255 306 186 4 23 328 24 323 6.79e-68 216
MsG0580024758.01.T01 MTR_7g086820 39.604 303 173 5 25 327 18 310 9.68e-68 215
MsG0580024758.01.T01 MTR_5g021060 39.867 301 175 4 30 328 33 329 1.30e-67 215
MsG0580024758.01.T01 MTR_1g054205 36.923 325 198 5 4 325 2 322 1.79e-67 214
MsG0580024758.01.T01 MTR_4g029200 38.636 308 177 5 22 328 41 337 6.72e-66 211
MsG0580024758.01.T01 MTR_4g029170 36.335 322 186 6 13 325 6 317 8.60e-66 210
MsG0580024758.01.T01 MTR_4g030890 38.047 297 178 4 32 328 105 395 1.12e-65 213
MsG0580024758.01.T01 MTR_2g008710 35.168 327 199 6 5 326 4 322 2.01e-65 209
MsG0580024758.01.T01 MTR_6g043240 39.091 330 180 8 6 328 15 330 2.40e-65 210
MsG0580024758.01.T01 MTR_5g017860 35.948 306 189 5 25 328 25 325 5.87e-65 208
MsG0580024758.01.T01 MTR_0155s0040 37.117 326 185 6 8 328 4 314 1.72e-64 206
MsG0580024758.01.T01 MTR_2g084000 37.273 330 193 6 1 328 1 318 2.69e-64 206
MsG0580024758.01.T01 MTR_5g017850 35.276 326 197 7 6 328 11 325 2.70e-64 206
MsG0580024758.01.T01 MTR_7g086870 40.404 297 162 6 32 327 27 309 8.81e-64 204
MsG0580024758.01.T01 MTR_2g437770 37.954 303 175 7 27 328 50 340 1.19e-63 205
MsG0580024758.01.T01 MTR_5g074970 37.879 330 186 8 2 325 6 322 1.23e-63 204
MsG0580024758.01.T01 MTR_3g094670 38.066 331 186 7 1 325 1 318 3.09e-63 203
MsG0580024758.01.T01 MTR_3g105790 36.223 323 191 5 6 326 10 319 9.29e-63 202
MsG0580024758.01.T01 MTR_5g083860 37.037 324 188 6 5 325 11 321 1.08e-62 202
MsG0580024758.01.T01 MTR_3g072190 38.614 303 176 3 26 328 25 317 1.27e-62 202
MsG0580024758.01.T01 MTR_3g466200 37.188 320 184 7 11 325 9 316 2.92e-62 201
MsG0580024758.01.T01 MTR_4g083710 37.304 319 187 5 14 328 14 323 5.30e-62 200
MsG0580024758.01.T01 MTR_4g029180 36.700 297 178 4 30 325 30 317 6.24e-62 200
MsG0580024758.01.T01 MTR_5g074860 36.728 324 189 8 7 325 9 321 7.05e-62 200
MsG0580024758.01.T01 MTR_6g043280 35.258 329 196 6 6 328 14 331 1.02e-61 200
MsG0580024758.01.T01 MTR_2g008160 37.179 312 177 7 23 326 20 320 4.10e-61 198
MsG0580024758.01.T01 MTR_3g094630 38.066 331 186 7 1 325 1 318 1.05e-60 197
MsG0580024758.01.T01 MTR_4g125940 41.328 271 150 4 62 328 8 273 1.32e-60 195
MsG0580024758.01.T01 MTR_2g029830 41.923 260 144 4 72 328 5 260 4.49e-60 194
MsG0580024758.01.T01 MTR_4g122640 35.599 309 189 7 23 328 34 335 1.52e-59 194
MsG0580024758.01.T01 MTR_6g043460 36.810 326 188 6 7 325 10 324 3.66e-59 194
MsG0580024758.01.T01 MTR_4g074995 36.760 321 177 6 12 328 9 307 4.11e-59 192
MsG0580024758.01.T01 MTR_5g074760 37.082 329 188 8 2 325 3 317 4.87e-59 192
MsG0580024758.01.T01 MTR_6g027440 37.342 316 188 6 11 325 4 310 1.30e-58 191
MsG0580024758.01.T01 MTR_4g029190 37.838 296 170 6 36 328 55 339 1.33e-58 192
MsG0580024758.01.T01 MTR_5g074740 36.170 329 191 8 2 325 3 317 2.42e-57 188
MsG0580024758.01.T01 MTR_5g014100 35.737 319 192 5 18 328 17 330 2.60e-57 188
MsG0580024758.01.T01 MTR_1g115900 37.346 324 183 9 13 328 9 320 7.74e-57 187
MsG0580024758.01.T01 MTR_5g074710 36.170 329 191 8 2 325 3 317 8.93e-57 187
MsG0580024758.01.T01 MTR_5g049280 33.138 341 198 9 10 328 4 336 9.69e-57 187
MsG0580024758.01.T01 MTR_3g467600 36.533 323 189 7 11 328 12 323 1.01e-56 187
MsG0580024758.01.T01 MTR_2g099175 32.362 343 202 6 1 325 1 331 1.17e-55 184
MsG0580024758.01.T01 MTR_1g022970 35.880 301 188 3 27 325 46 343 1.38e-55 184
MsG0580024758.01.T01 MTR_2g067440 32.749 342 195 6 17 328 50 386 1.69e-55 185
MsG0580024758.01.T01 MTR_4g132490 33.028 327 205 7 7 325 3 323 7.11e-55 182
MsG0580024758.01.T01 MTR_7g026990 33.229 319 201 6 11 328 14 321 2.06e-53 178
MsG0580024758.01.T01 MTR_3g466180 35.312 320 189 4 6 325 18 319 3.34e-53 177
MsG0580024758.01.T01 MTR_4g074990 32.923 325 189 6 8 328 5 304 1.85e-52 175
MsG0580024758.01.T01 MTR_2g077990 32.036 334 191 6 25 326 74 403 8.46e-52 176
MsG0580024758.01.T01 MTR_2g078610 31.437 334 193 7 25 326 74 403 3.92e-51 174
MsG0580024758.01.T01 MTR_3g072190 37.838 259 151 3 70 328 2 250 4.11e-50 167
MsG0580024758.01.T01 MTR_1g066710 35.179 307 187 5 25 328 25 322 1.14e-49 168
MsG0580024758.01.T01 MTR_4g132110 33.882 304 189 5 27 327 32 326 2.17e-49 168
MsG0580024758.01.T01 MTR_1g066640 35.505 307 186 5 25 328 25 322 2.94e-49 167
MsG0580024758.01.T01 MTR_2g078280 32.399 321 181 6 25 313 74 390 4.74e-49 169
MsG0580024758.01.T01 MTR_2g008730 30.395 329 192 6 3 326 2 298 1.81e-48 164
MsG0580024758.01.T01 MTR_1g066380 35.048 311 182 6 25 328 25 322 1.95e-48 165
MsG0580024758.01.T01 MTR_3g105790 37.449 243 146 3 86 326 5 243 4.77e-48 162
MsG0580024758.01.T01 MTR_0147s0010 33.540 322 177 7 27 328 77 381 6.41e-48 165
MsG0580024758.01.T01 MTR_5g033470 33.010 309 193 7 25 325 71 373 2.29e-47 164
MsG0580024758.01.T01 MTR_4g132110 33.333 309 189 7 27 327 32 331 2.80e-47 162
MsG0580024758.01.T01 MTR_2g008160 33.333 312 154 7 23 326 20 285 4.67e-47 160
MsG0580024758.01.T01 MTR_1g066680 34.740 308 186 6 25 328 25 321 7.12e-46 159
MsG0580024758.01.T01 MTR_4g074980 34.363 259 156 5 7 261 5 253 2.76e-44 152
MsG0580024758.01.T01 MTR_4g074980 30.061 326 187 7 7 328 5 293 4.28e-43 150
MsG0580024758.01.T01 MTR_2g067450 32.692 312 191 9 25 328 9 309 2.02e-41 146
MsG0580024758.01.T01 MTR_5g074860 31.173 324 168 8 7 325 9 282 4.25e-40 142
MsG0580024758.01.T01 MTR_2g029880 39.691 194 105 3 137 328 4 187 3.12e-38 135
MsG0580024758.01.T01 MTR_2g008160 37.931 203 103 6 23 222 20 202 1.84e-35 128
MsG0580024758.01.T01 MTR_1g066380 35.094 265 152 6 71 328 3 254 1.90e-35 129
MsG0580024758.01.T01 MTR_5g074700 36.245 229 121 7 103 328 7 213 6.88e-34 124
MsG0580024758.01.T01 MTR_3g072210 38.503 187 106 4 141 325 55 234 7.23e-32 119
MsG0580024758.01.T01 MTR_7g072490 31.933 238 96 6 73 309 2 174 1.83e-26 104
MsG0580024758.01.T01 MTR_7g086790 36.126 191 97 6 74 264 17 182 5.11e-25 100
MsG0580024758.01.T01 MTR_2g078560 26.941 219 129 3 139 326 99 317 1.78e-23 99.0
MsG0580024758.01.T01 MTR_4g031040 33.784 148 79 3 122 267 5 135 1.15e-22 92.0
MsG0580024758.01.T01 MTR_5g058120 31.875 160 98 2 166 325 7 155 6.40e-18 82.4
MsG0580024758.01.T01 MTR_3g072260 36.496 137 83 3 1 137 1 133 5.96e-17 77.0
MsG0580024758.01.T01 MTR_1g098320 47.368 76 40 0 252 327 47 122 2.86e-16 75.1
MsG0580024758.01.T01 MTR_3g107060 32.584 178 92 7 47 212 92 253 6.76e-16 77.4
MsG0580024758.01.T01 MTR_4g114220 43.820 89 37 3 51 139 27 102 8.42e-14 68.2
MsG0580024758.01.T01 MTR_3g462850 30.282 142 90 6 194 328 9 148 8.51e-14 68.6
MsG0580024758.01.T01 MTR_4g012865 45.161 62 34 0 32 93 82 143 3.70e-13 66.6
MsG0580024758.01.T01 MTR_7g107500 39.583 96 56 2 233 328 3 96 4.84e-13 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024758.01.T01 AT4G37530 66.337 303 102 0 23 325 23 325 2.47e-153 433
MsG0580024758.01.T01 AT3G49960 62.769 325 121 0 1 325 1 325 4.37e-153 432
MsG0580024758.01.T01 AT5G67400 62.154 325 123 0 1 325 1 325 6.51e-152 429
MsG0580024758.01.T01 AT4G37520 64.784 301 106 0 25 325 25 325 4.16e-150 425
MsG0580024758.01.T01 AT4G30170 63.158 304 108 1 25 328 25 324 5.30e-148 419
MsG0580024758.01.T01 AT4G37520 64.452 301 104 1 25 325 25 322 4.20e-147 417
MsG0580024758.01.T01 AT2G18980 61.635 318 118 1 11 328 9 322 2.06e-146 416
MsG0580024758.01.T01 AT4G37530 68.462 260 82 0 23 282 23 282 3.97e-135 385
MsG0580024758.01.T01 AT5G14130 54.688 320 141 3 7 326 12 327 1.98e-117 342
MsG0580024758.01.T01 AT5G14130 54.688 320 141 3 7 326 53 368 4.69e-117 343
MsG0580024758.01.T01 AT4G17690 45.307 309 160 4 18 325 18 318 3.04e-94 283
MsG0580024758.01.T01 AT5G47000 46.026 302 156 3 25 325 31 326 1.35e-89 271
MsG0580024758.01.T01 AT2G34060 44.156 308 166 4 24 327 39 344 1.68e-87 266
MsG0580024758.01.T01 AT5G40150 46.078 306 157 4 24 328 29 327 3.60e-86 263
MsG0580024758.01.T01 AT3G28200 41.883 308 166 4 24 328 18 315 5.89e-82 251
MsG0580024758.01.T01 AT3G21770 42.857 308 167 6 23 327 25 326 1.32e-78 243
MsG0580024758.01.T01 AT5G42180 42.284 324 174 8 4 325 1 313 1.52e-78 243
MsG0580024758.01.T01 AT5G51890 40.909 330 184 8 1 328 1 321 1.68e-78 243
MsG0580024758.01.T01 AT1G05260 41.463 328 183 6 4 327 1 323 3.15e-78 242
MsG0580024758.01.T01 AT1G24110 41.456 316 181 3 11 325 6 318 4.61e-78 242
MsG0580024758.01.T01 AT5G06730 39.077 325 186 4 6 328 19 333 1.27e-74 234
MsG0580024758.01.T01 AT1G71695 39.640 333 180 6 6 326 13 336 6.56e-74 232
MsG0580024758.01.T01 AT3G01190 39.571 326 187 7 1 325 1 317 2.37e-72 227
MsG0580024758.01.T01 AT3G49120 39.748 317 184 4 16 328 21 334 2.66e-71 225
MsG0580024758.01.T01 AT4G11290 38.671 331 194 6 1 328 1 325 4.42e-71 224
MsG0580024758.01.T01 AT5G19880 38.199 322 191 5 9 325 7 325 5.04e-71 224
MsG0580024758.01.T01 AT3G03670 37.736 318 187 5 11 325 8 317 5.21e-71 223
MsG0580024758.01.T01 AT3G32980 39.748 317 184 4 16 328 20 333 9.41e-71 224
MsG0580024758.01.T01 AT3G49110 40.379 317 182 4 16 328 22 335 9.54e-71 224
MsG0580024758.01.T01 AT2G38380 37.695 321 194 4 11 328 15 332 2.74e-69 220
MsG0580024758.01.T01 AT5G06720 39.542 306 178 5 23 325 28 329 2.83e-69 219
MsG0580024758.01.T01 AT5G15180 36.826 334 199 7 1 328 1 328 3.54e-69 219
MsG0580024758.01.T01 AT2G18140 39.597 298 176 3 32 328 40 334 4.27e-69 219
MsG0580024758.01.T01 AT4G08780 40.968 310 176 4 23 328 20 326 4.81e-69 219
MsG0580024758.01.T01 AT4G36430 38.245 319 193 3 11 328 14 329 5.83e-69 218
MsG0580024758.01.T01 AT4G08770 40.645 310 177 4 23 328 20 326 6.72e-69 219
MsG0580024758.01.T01 AT4G31760 39.506 324 180 6 11 328 12 325 7.52e-69 218
MsG0580024758.01.T01 AT2G38390 37.383 321 195 4 11 328 15 332 1.62e-68 218
MsG0580024758.01.T01 AT5G17820 38.978 313 178 5 13 325 10 309 2.95e-68 216
MsG0580024758.01.T01 AT2G18150 39.262 298 177 3 32 328 41 335 8.79e-68 216
MsG0580024758.01.T01 AT5G17820 38.978 313 178 5 13 325 63 362 1.18e-67 216
MsG0580024758.01.T01 AT2G22420 37.736 318 191 5 11 328 8 318 3.10e-67 214
MsG0580024758.01.T01 AT4G33420 38.226 327 184 7 6 328 12 324 3.21e-67 214
MsG0580024758.01.T01 AT1G05240 39.604 303 174 5 27 326 26 322 5.81e-67 213
MsG0580024758.01.T01 AT1G05250 39.604 303 174 5 27 326 26 322 5.81e-67 213
MsG0580024758.01.T01 AT4G33420 38.226 327 184 7 6 328 59 371 1.27e-66 214
MsG0580024758.01.T01 AT5G64120 38.384 297 174 5 32 328 40 327 3.40e-66 211
MsG0580024758.01.T01 AT5G19890 38.272 324 187 6 9 328 12 326 1.40e-65 210
MsG0580024758.01.T01 AT1G14540 36.533 323 190 5 7 328 6 314 1.48e-65 209
MsG0580024758.01.T01 AT4G16270 39.333 300 172 8 32 328 55 347 2.56e-65 209
MsG0580024758.01.T01 AT5G66390 37.538 333 196 5 1 325 1 329 5.30e-64 206
MsG0580024758.01.T01 AT2G41480 37.231 325 191 5 9 328 11 327 6.37e-64 205
MsG0580024758.01.T01 AT5G05340 38.361 305 174 5 24 325 27 320 8.28e-64 205
MsG0580024758.01.T01 AT2G39040 38.782 312 179 7 24 328 43 349 9.00e-64 206
MsG0580024758.01.T01 AT3G50990 35.780 327 205 4 1 325 14 337 1.03e-63 205
MsG0580024758.01.T01 AT2G24800 37.419 310 178 6 25 328 29 328 4.54e-63 203
MsG0580024758.01.T01 AT5G64110 36.280 328 193 7 7 328 12 329 5.31e-63 203
MsG0580024758.01.T01 AT5G58400 38.080 323 181 8 8 325 13 321 2.15e-62 201
MsG0580024758.01.T01 AT1G77100 37.195 328 187 8 6 326 1 316 4.24e-62 201
MsG0580024758.01.T01 AT5G39580 36.923 325 192 9 8 328 3 318 5.31e-62 200
MsG0580024758.01.T01 AT1G34510 37.778 315 178 7 13 325 7 305 5.56e-62 200
MsG0580024758.01.T01 AT1G14550 36.061 330 199 6 1 328 1 320 5.74e-62 200
MsG0580024758.01.T01 AT1G49570 36.275 306 185 6 25 325 46 346 9.00e-62 201
MsG0580024758.01.T01 AT4G33870 32.840 338 188 5 24 326 65 398 1.45e-60 199
MsG0580024758.01.T01 AT1G30870 38.312 308 176 7 22 326 46 342 2.28e-60 197
MsG0580024758.01.T01 AT4G26010 35.514 321 189 7 8 327 4 307 3.76e-60 195
MsG0580024758.01.T01 AT4G26010 35.714 322 187 8 8 327 32 335 6.46e-60 195
MsG0580024758.01.T01 AT1G44970 36.482 307 190 3 24 328 42 345 3.34e-59 194
MsG0580024758.01.T01 AT2G43480 33.762 311 190 6 22 325 30 331 8.16e-58 190
MsG0580024758.01.T01 AT5G58390 38.154 325 183 8 6 325 1 312 1.42e-57 189
MsG0580024758.01.T01 AT5G24070 34.951 309 185 6 26 327 34 333 3.99e-56 186
MsG0580024758.01.T01 AT5G22410 34.259 324 196 9 7 325 10 321 4.87e-56 185
MsG0580024758.01.T01 AT5G64100 35.333 300 180 6 32 328 42 330 1.32e-55 184
MsG0580024758.01.T01 AT4G25980 34.091 308 189 5 25 326 24 323 8.61e-55 182
MsG0580024758.01.T01 AT2G35380 35.599 309 188 6 27 328 30 334 1.44e-52 176
MsG0580024758.01.T01 AT1G68850 31.515 330 212 9 8 328 10 334 1.73e-51 174
MsG0580024758.01.T01 AT4G21960 32.776 299 189 5 32 327 36 325 2.04e-48 165
MsG0580024758.01.T01 AT2G37130 33.657 309 192 6 24 328 27 326 1.63e-47 163
MsG0580024758.01.T01 AT2G37130 33.993 303 187 6 30 328 2 295 5.42e-47 160
MsG0580024758.01.T01 AT3G17070 32.680 306 191 6 27 325 38 335 1.06e-45 159
MsG0580024758.01.T01 AT2G35380 35.897 234 140 5 102 328 16 246 7.45e-38 135
MsG0580024758.01.T01 AT2G24800 38.012 171 99 3 25 195 29 192 3.33e-31 118
MsG0580024758.01.T01 AT3G17070 30.303 264 168 7 69 325 18 272 1.96e-30 117
MsG0580024758.01.T01 AT5G39580 40.719 167 91 5 32 198 30 188 3.66e-28 109
MsG0580024758.01.T01 AT4G25980 38.202 178 101 4 25 201 69 238 4.79e-28 110
MsG0580024758.01.T01 AT4G32320 28.674 279 152 12 7 267 74 323 9.86e-18 83.2

Find 85 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAGTGGTGTCTACTTAAT+TGG 0.165416 5:+9309551 None:intergenic
TCAAAGGCATGTGGAGTAAT+TGG 0.184890 5:+9307388 None:intergenic
ATGATGACAAATTATATTAT+TGG 0.216620 5:-9307109 MsG0580024758.01.T01:three_prime_UTR
ACAGAAATGATTGCACTTTC+AGG 0.236725 5:-9308558 MsG0580024758.01.T01:intron
TCTAAAGATTCTGATGTAAA+TGG 0.264360 5:-9308651 MsG0580024758.01.T01:CDS
CCAGCCAATGAAAGATTATC+AGG 0.272485 5:+9309248 None:intergenic
TGTTGCTGCCATGACCAAAT+TGG 0.277940 5:-9307233 MsG0580024758.01.T01:CDS
CTTCCATGACTGCTTTGTTC+AGG 0.296230 5:-9309431 MsG0580024758.01.T01:intron
GACACCAACTCGACCCAATT+TGG 0.314627 5:+9307219 None:intergenic
ACCATACTATGAGGTAGAAT+TGG 0.315906 5:-9308694 MsG0580024758.01.T01:CDS
TCCAAGGGTTGCAGTTGATA+TGG 0.330440 5:-9307413 MsG0580024758.01.T01:CDS
CTTGAAATTGTACACTCTAT+TGG 0.334476 5:+9307513 None:intergenic
CAGCACAAGAAACTTTATTC+TGG 0.336699 5:+9309168 None:intergenic
AACAGCATCCACAGCTGCTT+TGG 0.345598 5:+9309199 None:intergenic
TGTACTTACGGAATATAATA+AGG 0.380746 5:+9307037 None:intergenic
CCCAATTCTACCTCATAGTA+TGG 0.385461 5:+9308693 None:intergenic
GTAGAATTGGGAAGATTTGA+TGG 0.400406 5:-9308681 MsG0580024758.01.T01:CDS
AGAGAGTTAAGAAGAGTAAC+GGG 0.410176 5:+9309599 None:intergenic
TCACCCTGATAATCTTTCAT+TGG 0.428396 5:-9309252 MsG0580024758.01.T01:CDS
CCTGATAATCTTTCATTGGC+TGG 0.430855 5:-9309248 MsG0580024758.01.T01:CDS
GTAGTGGTGTCTACTTAATT+GGG 0.434010 5:+9309552 None:intergenic
GTTGCTGCCATGACCAAATT+GGG 0.437082 5:-9307232 MsG0580024758.01.T01:CDS
AAAAGCATTCACTGCAGCTT+TGG 0.441419 5:+9307288 None:intergenic
CAAAGGCATGTGGAGTAATT+GGG 0.442444 5:+9307389 None:intergenic
ACCCTTGGATCCACATCCCT+TGG 0.454377 5:+9307427 None:intergenic
TTGCAGAGGTAAAGTAAAGA+AGG 0.455504 5:+9309659 None:intergenic
AATCTTTCATTGGCTGGAGA+TGG 0.460504 5:-9309242 MsG0580024758.01.T01:CDS
ATCAATGTGCCCAAGGGATG+TGG 0.460713 5:-9307437 MsG0580024758.01.T01:CDS
TTGTGCTGATATTCTAGCTA+TGG 0.463503 5:-9309153 MsG0580024758.01.T01:CDS
GTTTAAACAATGTATTAAGC+TGG 0.467335 5:+9308598 None:intergenic
CCATACTATGAGGTAGAATT+GGG 0.468056 5:-9308693 MsG0580024758.01.T01:CDS
TTGAATCCGTGAAGAGGACT+TGG 0.468682 5:+9307314 None:intergenic
TCCATATCAACTGCAACCCT+TGG 0.475393 5:+9307412 None:intergenic
CTATTTCAAGAATCTACAAA+AGG 0.475878 5:-9307359 MsG0580024758.01.T01:CDS
AGCTGGTTCAAGTTGAATCC+TGG 0.480998 5:+9308615 None:intergenic
GCGTAGTGTAAGTCTAATGT+AGG 0.483647 5:+9307472 None:intergenic
CTCAGACCAAGTCCTCTTCA+CGG 0.486562 5:-9307320 MsG0580024758.01.T01:CDS
ATACATTGTTTAAACATCAC+GGG 0.490569 5:-9308590 MsG0580024758.01.T01:CDS
TATTTCAAGAATCTACAAAA+GGG 0.495761 5:-9307358 MsG0580024758.01.T01:CDS
AAGAAGAGACGTAGAGTGGC+AGG 0.502656 5:+9309451 None:intergenic
CCCTTGGATCCACATCCCTT+GGG 0.505679 5:+9307428 None:intergenic
AATACATTGTTTAAACATCA+CGG 0.513218 5:-9308591 MsG0580024758.01.T01:CDS
GTGTCAAGAATTCACACAAT+GGG 0.518226 5:-9307201 MsG0580024758.01.T01:CDS
AACCCGTGATGTTATTGCAT+TGG 0.520448 5:-9309129 MsG0580024758.01.T01:intron
TTCAAGTTGAATCCTGGCTC+AGG 0.520683 5:+9308621 None:intergenic
CCAATTACACAGGGTTGTGA+TGG 0.520878 5:-9309320 MsG0580024758.01.T01:intron
CAAGAATCTACAAAAGGGGA+AGG 0.521642 5:-9307353 MsG0580024758.01.T01:CDS
TCTGTAGGAGCTCACACCGT+TGG 0.528334 5:-9307559 MsG0580024758.01.T01:intron
TTACCTGAACAAAGCAGTCA+TGG 0.532969 5:+9309428 None:intergenic
AATGGAAAACTTCCTGAGCC+AGG 0.533024 5:-9308633 MsG0580024758.01.T01:CDS
AAGAGAGTTAAGAAGAGTAA+CGG 0.533383 5:+9309598 None:intergenic
TCCCTCTCTGCTCTATTATG+TGG 0.534283 5:+9309275 None:intergenic
GAAACTTTATTCTGGCAAAG+AGG 0.538555 5:+9309176 None:intergenic
GGTCATGGCAGCAACAAAGT+TGG 0.538768 5:+9307240 None:intergenic
AATTAAAATCAATGTGCCCA+AGG 0.543156 5:-9307444 MsG0580024758.01.T01:CDS
TAGAATTGGGAAGATTTGAT+GGG 0.544238 5:-9308680 MsG0580024758.01.T01:CDS
AACCAATGCAATAACATCAC+GGG 0.563893 5:+9309127 None:intergenic
TTTGTCATCATGTCATCCAC+AGG 0.564567 5:+9307121 None:intergenic
CTTGAAATAGACATTATCAA+AGG 0.566475 5:+9307372 None:intergenic
GCCCAAGGGATGTGGATCCA+AGG 0.566912 5:-9307429 MsG0580024758.01.T01:CDS
CATATCAAGTTAGAATGTTG+TGG 0.566972 5:-9307146 MsG0580024758.01.T01:three_prime_UTR
AAGAATCTACAAAAGGGGAA+GGG 0.579158 5:-9307352 MsG0580024758.01.T01:CDS
TGGATCTTGAATCCGTGAAG+AGG 0.581662 5:+9307308 None:intergenic
ACACAATGGGAACATTCGTA+CGG 0.590337 5:-9307188 MsG0580024758.01.T01:CDS
GCCACATAATAGAGCAGAGA+GGG 0.597026 5:-9309276 MsG0580024758.01.T01:CDS
CTACTTAATTGGGCATGAGT+AGG 0.598762 5:+9309562 None:intergenic
CCCAAGGGATGTGGATCCAA+GGG 0.601578 5:-9307428 MsG0580024758.01.T01:CDS
ATTAAAATCAATGTGCCCAA+GGG 0.604041 5:-9307443 MsG0580024758.01.T01:CDS
CGTGAAGAGGACTTGGTCTG+AGG 0.605078 5:+9307321 None:intergenic
AAACCAATGCAATAACATCA+CGG 0.605408 5:+9309126 None:intergenic
TATACAAGCCAAAGCAGCTG+TGG 0.607386 5:-9309207 MsG0580024758.01.T01:CDS
AACTCGACCCAATTTGGTCA+TGG 0.625747 5:+9307225 None:intergenic
ATGACCAAATTGGGTCGAGT+TGG 0.628391 5:-9307223 MsG0580024758.01.T01:CDS
ATTTCAAGAATCTACAAAAG+GGG 0.630722 5:-9307357 MsG0580024758.01.T01:CDS
GGCAGGAGGACCATACTATG+AGG 0.631628 5:-9308703 MsG0580024758.01.T01:CDS
CGTAGTGTAAGTCTAATGTA+GGG 0.631745 5:+9307473 None:intergenic
CAGCCAATGAAAGATTATCA+GGG 0.640554 5:+9309249 None:intergenic
ATGGAAGAAGAGACGTAGAG+TGG 0.643216 5:+9309447 None:intergenic
TAGGACAAGAATTCTTGTAG+TGG 0.645111 5:+9309536 None:intergenic
TAGACATTATCAAAGGCATG+TGG 0.651893 5:+9307379 None:intergenic
GGTGTCAAGAATTCACACAA+TGG 0.671153 5:-9307202 MsG0580024758.01.T01:CDS
TTGTCATCATGTCATCCACA+GGG 0.687419 5:+9307122 None:intergenic
TTAGAATGTTGTGGTCCCTG+TGG 0.688745 5:-9307137 MsG0580024758.01.T01:three_prime_UTR
GTTGCAATGTGAGAATCCAA+CGG 0.699363 5:+9307543 None:intergenic
CGCCACATAATAGAGCAGAG+AGG 0.791379 5:-9309277 MsG0580024758.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAATAGATAAAACTT+TGG - Chr5:9309098-9309117 MsG0580024758.01.T01:intron 10.0%
!!! ATCATTTTTCTTTAATTAAT+TGG + Chr5:9308212-9308231 None:intergenic 10.0%
!! AAGTTTAAAAATTAGATTGA+TGG - Chr5:9307830-9307849 MsG0580024758.01.T01:intron 15.0%
!! AGAAAAATAAAGATATTGAA+GGG - Chr5:9308980-9308999 MsG0580024758.01.T01:intron 15.0%
!! ATGATGACAAATTATATTAT+TGG - Chr5:9309602-9309621 MsG0580024758.01.T01:CDS 15.0%
!! GAAAATGTAACATTTATTTA+TGG + Chr5:9307342-9307361 None:intergenic 15.0%
!! TAGAAAAATAAAGATATTGA+AGG - Chr5:9308979-9308998 MsG0580024758.01.T01:intron 15.0%
!! AATACATTGTTTAAACATCA+CGG - Chr5:9308120-9308139 MsG0580024758.01.T01:intron 20.0%
!! AGTAATCATTCTTAAAAAGT+TGG - Chr5:9309060-9309079 MsG0580024758.01.T01:intron 20.0%
!! ATTAAAGAACATCAAAGTTA+AGG + Chr5:9308554-9308573 None:intergenic 20.0%
!! TAACTTTGATGTTCTTTAAT+AGG - Chr5:9308554-9308573 MsG0580024758.01.T01:intron 20.0%
!! TAGGATAATTAAAATAGTCA+CGG + Chr5:9307734-9307753 None:intergenic 20.0%
!! TATTTCAAGAATCTACAAAA+GGG - Chr5:9309353-9309372 MsG0580024758.01.T01:intron 20.0%
!! TCTAATTATTAGAATAGACT+TGG - Chr5:9307864-9307883 MsG0580024758.01.T01:intron 20.0%
!!! AATGTGAAATTTGAATTTTC+AGG - Chr5:9307987-9308006 MsG0580024758.01.T01:intron 20.0%
!!! AGTCAAAAGTAATTTTAAAC+AGG - Chr5:9308422-9308441 MsG0580024758.01.T01:intron 20.0%
!!! TAAAGTTACTTTGTAGTATA+TGG + Chr5:9308910-9308929 None:intergenic 20.0%
!!! TCAATTACATGCATTTTATT+TGG - Chr5:9307312-9307331 MsG0580024758.01.T01:CDS 20.0%
!!! TTGTTTTTCTCACTTTTTAT+TGG + Chr5:9308338-9308357 None:intergenic 20.0%
!!! TTTTTATTGGTCAAAAACAA+TGG + Chr5:9308325-9308344 None:intergenic 20.0%
! ACGACTTGACATTATTTATA+TGG - Chr5:9308648-9308667 MsG0580024758.01.T01:CDS 25.0%
! ATACATTGTTTAAACATCAC+GGG - Chr5:9308121-9308140 MsG0580024758.01.T01:intron 25.0%
! ATCAAAGTTAAGGACAAATT+TGG + Chr5:9308544-9308563 None:intergenic 25.0%
! ATTTCAAGAATCTACAAAAG+GGG - Chr5:9309354-9309373 MsG0580024758.01.T01:intron 25.0%
! CTATTTCAAGAATCTACAAA+AGG - Chr5:9309352-9309371 MsG0580024758.01.T01:intron 25.0%
! CTTGAAATAGACATTATCAA+AGG + Chr5:9309342-9309361 None:intergenic 25.0%
! GTTTAAACAATGTATTAAGC+TGG + Chr5:9308116-9308135 None:intergenic 25.0%
! TATGATATTCCAATTACACA+GGG - Chr5:9307382-9307401 MsG0580024758.01.T01:CDS 25.0%
! TCTAAAGATTCTGATGTAAA+TGG - Chr5:9308060-9308079 MsG0580024758.01.T01:intron 25.0%
! TTACTCGTTATAATAGTGTT+TGG + Chr5:9307913-9307932 None:intergenic 25.0%
!! ATTCAGTCTTATAACTAACT+AGG - Chr5:9307950-9307969 MsG0580024758.01.T01:intron 25.0%
!!! AACCATTTTTTGACAACTTT+TGG - Chr5:9308240-9308259 MsG0580024758.01.T01:intron 25.0%
!!! CAAAGAAAGTTGATATCTTT+AGG + Chr5:9307753-9307772 None:intergenic 25.0%
AAAACAATGGAGAGAGAAAA+AGG + Chr5:9308312-9308331 None:intergenic 30.0%
AAACCAATGCAATAACATCA+CGG + Chr5:9307588-9307607 None:intergenic 30.0%
AAGACTGAATTAACTTTCAC+AGG + Chr5:9307940-9307959 None:intergenic 30.0%
AAGAGAGTTAAGAAGAGTAA+CGG + Chr5:9307116-9307135 None:intergenic 30.0%
AATTAAAATCAATGTGCCCA+AGG - Chr5:9309267-9309286 MsG0580024758.01.T01:CDS 30.0%
AGACTGAATTAACTTTCACA+GGG + Chr5:9307939-9307958 None:intergenic 30.0%
ATTAAAATCAATGTGCCCAA+GGG - Chr5:9309268-9309287 MsG0580024758.01.T01:CDS 30.0%
CATATCAAGTTAGAATGTTG+TGG - Chr5:9309565-9309584 MsG0580024758.01.T01:CDS 30.0%
CTATGATATTCCAATTACAC+AGG - Chr5:9307381-9307400 MsG0580024758.01.T01:CDS 30.0%
CTCTGCAAAAAAACATCAAA+TGG - Chr5:9307067-9307086 MsG0580024758.01.T01:three_prime_UTR 30.0%
CTTGAAATTGTACACTCTAT+TGG + Chr5:9309201-9309220 None:intergenic 30.0%
GTCCAAAAGTTGTCAAAAAA+TGG + Chr5:9308245-9308264 None:intergenic 30.0%
TAGAATTGGGAAGATTTGAT+GGG - Chr5:9308031-9308050 MsG0580024758.01.T01:intron 30.0%
! CTGACAATGTTTTCAACATT+AGG + Chr5:9307197-9307216 None:intergenic 30.0%
!! TGAAATTTGAATTTTCAGGC+AGG - Chr5:9307991-9308010 MsG0580024758.01.T01:intron 30.0%
!!! CATTTGATGTTTTTTTGCAG+AGG + Chr5:9307069-9307088 None:intergenic 30.0%
AACCAATGCAATAACATCAC+GGG + Chr5:9307587-9307606 None:intergenic 35.0%
AAGAATCTACAAAAGGGGAA+GGG - Chr5:9309359-9309378 MsG0580024758.01.T01:intron 35.0%
AAGCATCTGAGTTAGATCTT+GGG - Chr5:9308933-9308952 MsG0580024758.01.T01:intron 35.0%
ACAGAAATGATTGCACTTTC+AGG - Chr5:9308153-9308172 MsG0580024758.01.T01:intron 35.0%
ACCATACTATGAGGTAGAAT+TGG - Chr5:9308017-9308036 MsG0580024758.01.T01:intron 35.0%
ACCCTCAAACAGTATAATGA+GGG + Chr5:9308495-9308514 None:intergenic 35.0%
ACCCTCATTATACTGTTTGA+GGG - Chr5:9308491-9308510 MsG0580024758.01.T01:intron 35.0%
AGAGAGTTAAGAAGAGTAAC+GGG + Chr5:9307115-9307134 None:intergenic 35.0%
CAGCACAAGAAACTTTATTC+TGG + Chr5:9307546-9307565 None:intergenic 35.0%
CAGCCAATGAAAGATTATCA+GGG + Chr5:9307465-9307484 None:intergenic 35.0%
CCATACTATGAGGTAGAATT+GGG - Chr5:9308018-9308037 MsG0580024758.01.T01:intron 35.0%
CGTAGTGTAAGTCTAATGTA+GGG + Chr5:9309241-9309260 None:intergenic 35.0%
GAAACTTTATTCTGGCAAAG+AGG + Chr5:9307538-9307557 None:intergenic 35.0%
GAATCATGTCAATCAACACT+AGG + Chr5:9309126-9309145 None:intergenic 35.0%
GTAGAATTGGGAAGATTTGA+TGG - Chr5:9308030-9308049 MsG0580024758.01.T01:intron 35.0%
GTAGTGGTGTCTACTTAATT+GGG + Chr5:9307162-9307181 None:intergenic 35.0%
GTGTCAAGAATTCACACAAT+GGG - Chr5:9309510-9309529 MsG0580024758.01.T01:CDS 35.0%
TACCCTCAAACAGTATAATG+AGG + Chr5:9308496-9308515 None:intergenic 35.0%
TAGGACAAGAATTCTTGTAG+TGG + Chr5:9307178-9307197 None:intergenic 35.0%
TCACCCTGATAATCTTTCAT+TGG - Chr5:9307459-9307478 MsG0580024758.01.T01:CDS 35.0%
TGTAGTGGTGTCTACTTAAT+TGG + Chr5:9307163-9307182 None:intergenic 35.0%
TTGCAGAGGTAAAGTAAAGA+AGG + Chr5:9307055-9307074 None:intergenic 35.0%
! TAGACATTATCAAAGGCATG+TGG + Chr5:9309335-9309354 None:intergenic 35.0%
! TATACTGTTTGAGGGTATGA+GGG - Chr5:9308499-9308518 MsG0580024758.01.T01:intron 35.0%
! TTATACTGTTTGAGGGTATG+AGG - Chr5:9308498-9308517 MsG0580024758.01.T01:intron 35.0%
! TTGTGCTGATATTCTAGCTA+TGG - Chr5:9307558-9307577 MsG0580024758.01.T01:intron 35.0%
!! AATTTGAATTTTCAGGCAGG+AGG - Chr5:9307994-9308013 MsG0580024758.01.T01:intron 35.0%
!! GTAGTATTTCTAGTGGTTGT+CGG - Chr5:9309002-9309021 MsG0580024758.01.T01:intron 35.0%
!! TTGAAGGGTAGTATTTCTAG+TGG - Chr5:9308995-9309014 MsG0580024758.01.T01:intron 35.0%
AACCCGTGATGTTATTGCAT+TGG - Chr5:9307582-9307601 MsG0580024758.01.T01:intron 40.0%
ACACAATGGGAACATTCGTA+CGG - Chr5:9309523-9309542 MsG0580024758.01.T01:CDS 40.0%
ACATGATTCATTCCCTCTGT+AGG - Chr5:9309137-9309156 MsG0580024758.01.T01:CDS 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + Chr5:9308302-9308321 None:intergenic 40.0%
CAAGAATCTACAAAAGGGGA+AGG - Chr5:9309358-9309377 MsG0580024758.01.T01:intron 40.0%
CAAGCATCTGAGTTAGATCT+TGG - Chr5:9308932-9308951 MsG0580024758.01.T01:intron 40.0%
CCAGCCAATGAAAGATTATC+AGG + Chr5:9307466-9307485 None:intergenic 40.0%
CCCAATTCTACCTCATAGTA+TGG + Chr5:9308021-9308040 None:intergenic 40.0%
CCTGATAATCTTTCATTGGC+TGG - Chr5:9307463-9307482 MsG0580024758.01.T01:CDS 40.0%
CTACTTAATTGGGCATGAGT+AGG + Chr5:9307152-9307171 None:intergenic 40.0%
GACCCTCATTATACTGTTTG+AGG - Chr5:9308490-9308509 MsG0580024758.01.T01:intron 40.0%
GCGTAGTGTAAGTCTAATGT+AGG + Chr5:9309242-9309261 None:intergenic 40.0%
GGTGTCAAGAATTCACACAA+TGG - Chr5:9309509-9309528 MsG0580024758.01.T01:CDS 40.0%
GTTGCAATGTGAGAATCCAA+CGG + Chr5:9309171-9309190 None:intergenic 40.0%
TAATGAGGGTCACATAGCAT+AGG + Chr5:9308481-9308500 None:intergenic 40.0%
TCAATATGTCTCATGCATGC+TGG + Chr5:9308450-9308469 None:intergenic 40.0%
TTACCTGAACAAAGCAGTCA+TGG + Chr5:9307286-9307305 None:intergenic 40.0%
TTGTCATCATGTCATCCACA+GGG + Chr5:9309592-9309611 None:intergenic 40.0%
TTTGTCATCATGTCATCCAC+AGG + Chr5:9309593-9309612 None:intergenic 40.0%
! AATCTTTCATTGGCTGGAGA+TGG - Chr5:9307469-9307488 MsG0580024758.01.T01:CDS 40.0%
! CAAAGGCATGTGGAGTAATT+GGG + Chr5:9309325-9309344 None:intergenic 40.0%
! GGATCATCTAGAACAGCATT+AGG - Chr5:9307885-9307904 MsG0580024758.01.T01:intron 40.0%
! TCAAAGGCATGTGGAGTAAT+TGG + Chr5:9309326-9309345 None:intergenic 40.0%
!! AAAAGCATTCACTGCAGCTT+TGG + Chr5:9309426-9309445 None:intergenic 40.0%
AACTCGACCCAATTTGGTCA+TGG + Chr5:9309489-9309508 None:intergenic 45.0%
AATGGAAAACTTCCTGAGCC+AGG - Chr5:9308078-9308097 MsG0580024758.01.T01:intron 45.0%
AGTGTAAACCGTAAACCACG+CGG + Chr5:9308186-9308205 None:intergenic 45.0%
ATGACCAAATTGGGTCGAGT+TGG - Chr5:9309488-9309507 MsG0580024758.01.T01:CDS 45.0%
ATGGAAGAAGAGACGTAGAG+TGG + Chr5:9307267-9307286 None:intergenic 45.0%
CCAATTACACAGGGTTGTGA+TGG - Chr5:9307391-9307410 MsG0580024758.01.T01:CDS 45.0%
CCATCACAACCCTGTGTAAT+TGG + Chr5:9307394-9307413 None:intergenic 45.0%
GCCACATAATAGAGCAGAGA+GGG - Chr5:9307435-9307454 MsG0580024758.01.T01:CDS 45.0%
GGTCACATAGCATAGGAACA+TGG + Chr5:9308474-9308493 None:intergenic 45.0%
GTTGCTGCCATGACCAAATT+GGG - Chr5:9309479-9309498 MsG0580024758.01.T01:CDS 45.0%
TATACAAGCCAAAGCAGCTG+TGG - Chr5:9307504-9307523 MsG0580024758.01.T01:CDS 45.0%
TCCATATCAACTGCAACCCT+TGG + Chr5:9309302-9309321 None:intergenic 45.0%
TCCCTCTCTGCTCTATTATG+TGG + Chr5:9307439-9307458 None:intergenic 45.0%
TGGATCTTGAATCCGTGAAG+AGG + Chr5:9309406-9309425 None:intergenic 45.0%
TGTTGCTGCCATGACCAAAT+TGG - Chr5:9309478-9309497 MsG0580024758.01.T01:CDS 45.0%
TTAGAATGTTGTGGTCCCTG+TGG - Chr5:9309574-9309593 MsG0580024758.01.T01:CDS 45.0%
TTGAATCCGTGAAGAGGACT+TGG + Chr5:9309400-9309419 None:intergenic 45.0%
! CTTCCATGACTGCTTTGTTC+AGG - Chr5:9307280-9307299 MsG0580024758.01.T01:CDS 45.0%
! GTTTGAGGGTATGAGGGTAT+TGG - Chr5:9308505-9308524 MsG0580024758.01.T01:intron 45.0%
! TCCAAGGGTTGCAGTTGATA+TGG - Chr5:9309298-9309317 MsG0580024758.01.T01:CDS 45.0%
!! AGCTGGTTCAAGTTGAATCC+TGG + Chr5:9308099-9308118 None:intergenic 45.0%
!! TTCAAGTTGAATCCTGGCTC+AGG + Chr5:9308093-9308112 None:intergenic 45.0%
!!! ATTATTTTACATTTATAAAT+TGG + Chr5:9309036-9309055 None:intergenic 5.0%
AACAGCATCCACAGCTGCTT+TGG + Chr5:9307515-9307534 None:intergenic 50.0%
AAGAAGAGACGTAGAGTGGC+AGG + Chr5:9307263-9307282 None:intergenic 50.0%
ATCAATGTGCCCAAGGGATG+TGG - Chr5:9309274-9309293 MsG0580024758.01.T01:CDS 50.0%
CGCCACATAATAGAGCAGAG+AGG - Chr5:9307434-9307453 MsG0580024758.01.T01:CDS 50.0%
CTCAGACCAAGTCCTCTTCA+CGG - Chr5:9309391-9309410 MsG0580024758.01.T01:intron 50.0%
GACACCAACTCGACCCAATT+TGG + Chr5:9309495-9309514 None:intergenic 50.0%
GGTCATGGCAGCAACAAAGT+TGG + Chr5:9309474-9309493 None:intergenic 50.0%
AACGGTGTGAGCTCCTACAG+AGG + Chr5:9309153-9309172 None:intergenic 55.0%
ACCCTTGGATCCACATCCCT+TGG + Chr5:9309287-9309306 None:intergenic 55.0%
ACGGTGTGAGCTCCTACAGA+GGG + Chr5:9309152-9309171 None:intergenic 55.0%
CCCAAGGGATGTGGATCCAA+GGG - Chr5:9309283-9309302 MsG0580024758.01.T01:CDS 55.0%
CCCTTGGATCCACATCCCTT+GGG + Chr5:9309286-9309305 None:intergenic 55.0%
GGCAGGAGGACCATACTATG+AGG - Chr5:9308008-9308027 MsG0580024758.01.T01:intron 55.0%
GTAATGCGCCGCGTGGTTTA+CGG - Chr5:9308175-9308194 MsG0580024758.01.T01:intron 55.0%
TCTGTAGGAGCTCACACCGT+TGG - Chr5:9309152-9309171 MsG0580024758.01.T01:CDS 55.0%
! CGTGAAGAGGACTTGGTCTG+AGG + Chr5:9309393-9309412 None:intergenic 55.0%
GCCCAAGGGATGTGGATCCA+AGG - Chr5:9309282-9309301 MsG0580024758.01.T01:CDS 60.0%
! CTTTCAGGTAATGCGCCGCG+TGG - Chr5:9308168-9308187 MsG0580024758.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 9307042 9309691 9307042 ID=MsG0580024758.01;Name=MsG0580024758.01
Chr5 mRNA 9307042 9309691 9307042 ID=MsG0580024758.01.T01;Parent=MsG0580024758.01;Name=MsG0580024758.01.T01;_AED=0.30;_eAED=0.30;_QI=44|1|1|1|1|1|4|129|328
Chr5 exon 9307042 9307574 9307042 ID=MsG0580024758.01.T01:exon:19552;Parent=MsG0580024758.01.T01
Chr5 exon 9308559 9308724 9308559 ID=MsG0580024758.01.T01:exon:19551;Parent=MsG0580024758.01.T01
Chr5 exon 9309130 9309330 9309130 ID=MsG0580024758.01.T01:exon:19550;Parent=MsG0580024758.01.T01
Chr5 exon 9309432 9309691 9309432 ID=MsG0580024758.01.T01:exon:19549;Parent=MsG0580024758.01.T01
Chr5 five_prime_UTR 9309648 9309691 9309648 ID=MsG0580024758.01.T01:five_prime_utr;Parent=MsG0580024758.01.T01
Chr5 CDS 9309432 9309647 9309432 ID=MsG0580024758.01.T01:cds;Parent=MsG0580024758.01.T01
Chr5 CDS 9309130 9309330 9309130 ID=MsG0580024758.01.T01:cds;Parent=MsG0580024758.01.T01
Chr5 CDS 9308559 9308724 9308559 ID=MsG0580024758.01.T01:cds;Parent=MsG0580024758.01.T01
Chr5 CDS 9307171 9307574 9307171 ID=MsG0580024758.01.T01:cds;Parent=MsG0580024758.01.T01
Chr5 three_prime_UTR 9307042 9307170 9307042 ID=MsG0580024758.01.T01:three_prime_utr;Parent=MsG0580024758.01.T01
Gene Sequence

>MsG0580024758.01.T01

ATGGCTCAGCTTAATCTTATACTTGTCCCGTTACTCTTCTTAACTCTCTTTCTTCATTCATGTCCTACTCATGCCCAATTAAGTAGACACCACTACAAGAATTCTTGTCCTAATGTTGAAAACATTGTCAGACAAGCTGTCAAAAAGAAATTTCATCAAACATTTACAACAGTTCCTGCCACTCTACGTCTCTTCTTCCATGACTGCTTTGTTCAGGGTTGTGATGGTTCTATTCTTGTAGCATCAACGCCACATAATAGAGCAGAGAGGGATCACCCTGATAATCTTTCATTGGCTGGAGATGGATTTGATACTGTTATACAAGCCAAAGCAGCTGTGGATGCTGTTCCTCTTTGCCAGAATAAAGTTTCTTGTGCTGATATTCTAGCTATGGCAACCCGTGATGTTATTGCATTGGCAGGAGGACCATACTATGAGGTAGAATTGGGAAGATTTGATGGGCTAAGATCTAAAGATTCTGATGTAAATGGAAAACTTCCTGAGCCAGGATTCAACTTGAACCAGCTTAATACATTGTTTAAACATCACGGGCTTACACAAACAGAAATGATTGCACTTTCAGGAGCTCACACCGTTGGATTCTCACATTGCAACAAATTCACCAATAGAGTGTACAATTTCAAGACAACAAGTCGAGTAGACCCTACATTAGACTTACACTACGCAGCAAAATTAAAATCAATGTGCCCAAGGGATGTGGATCCAAGGGTTGCAGTTGATATGGACCCAATTACTCCACATGCCTTTGATAATGTCTATTTCAAGAATCTACAAAAGGGGAAGGGTTTATTCACCTCAGACCAAGTCCTCTTCACGGATTCAAGATCCAAAGCTGCAGTGAATGCTTTTGCTAGTAGTAACAAAATATTTCGTGCCAACTTTGTTGCTGCCATGACCAAATTGGGTCGAGTTGGTGTCAAGAATTCACACAATGGGAACATTCGTACGGATTGTTCTGTGATTTAA

Protein sequence

>MsG0580024758.01.T01

MAQLNLILVPLLFLTLFLHSCPTHAQLSRHHYKNSCPNVENIVRQAVKKKFHQTFTTVPATLRLFFHDCFVQGCDGSILVASTPHNRAERDHPDNLSLAGDGFDTVIQAKAAVDAVPLCQNKVSCADILAMATRDVIALAGGPYYEVELGRFDGLRSKDSDVNGKLPEPGFNLNQLNTLFKHHGLTQTEMIALSGAHTVGFSHCNKFTNRVYNFKTTSRVDPTLDLHYAAKLKSMCPRDVDPRVAVDMDPITPHAFDNVYFKNLQKGKGLFTSDQVLFTDSRSKAAVNAFASSNKIFRANFVAAMTKLGRVGVKNSHNGNIRTDCSVI*