Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019419.01.T01 | XP_003605420.2 | 95.312 | 320 | 15 | 0 | 10 | 329 | 1 | 320 | 0 | 613 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019419.01.T01 | Q9SJZ2 | 71.521 | 309 | 88 | 0 | 21 | 329 | 7 | 315 | 3.85E-170 | 478 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019419.01.T01 | G7JKV1 | 95.312 | 320 | 15 | 0 | 10 | 329 | 1 | 320 | 0.0 | 613 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0480019419.01 | MsG0480020285.01 | PPI |
MsG0480019419.01 | MsG0380017351.01 | PPI |
MsG0580024758.01 | MsG0480019419.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019419.01.T01 | MTR_4g031140 | 95.312 | 320 | 15 | 0 | 10 | 329 | 1 | 320 | 0.0 | 613 |
MsG0480019419.01.T01 | MTR_4g030890 | 85.333 | 300 | 44 | 0 | 30 | 329 | 93 | 392 | 0.0 | 551 |
MsG0480019419.01.T01 | MTR_3g094650 | 45.000 | 320 | 163 | 5 | 15 | 329 | 7 | 318 | 1.72e-95 | 286 |
MsG0480019419.01.T01 | MTR_3g072190 | 44.969 | 318 | 160 | 5 | 20 | 329 | 4 | 314 | 1.14e-93 | 281 |
MsG0480019419.01.T01 | MTR_8g076820 | 46.801 | 297 | 154 | 3 | 37 | 329 | 30 | 326 | 2.81e-93 | 281 |
MsG0480019419.01.T01 | MTR_3g466200 | 44.620 | 316 | 162 | 5 | 20 | 329 | 8 | 316 | 3.56e-91 | 275 |
MsG0480019419.01.T01 | MTR_2g029800 | 45.033 | 302 | 161 | 3 | 33 | 329 | 25 | 326 | 2.06e-90 | 274 |
MsG0480019419.01.T01 | MTR_5g074970 | 43.939 | 330 | 165 | 6 | 10 | 329 | 3 | 322 | 1.73e-89 | 271 |
MsG0480019419.01.T01 | MTR_5g021060 | 45.118 | 297 | 159 | 3 | 37 | 329 | 30 | 326 | 2.81e-89 | 270 |
MsG0480019419.01.T01 | MTR_2g029740 | 44.371 | 302 | 163 | 3 | 33 | 329 | 25 | 326 | 1.04e-88 | 270 |
MsG0480019419.01.T01 | MTR_5g074860 | 44.375 | 320 | 160 | 6 | 21 | 329 | 9 | 321 | 2.35e-87 | 265 |
MsG0480019419.01.T01 | MTR_5g083860 | 43.750 | 320 | 168 | 4 | 15 | 329 | 9 | 321 | 3.32e-87 | 265 |
MsG0480019419.01.T01 | MTR_2g029750 | 43.709 | 302 | 165 | 3 | 33 | 329 | 25 | 326 | 4.91e-87 | 266 |
MsG0480019419.01.T01 | MTR_2g028980 | 43.421 | 304 | 167 | 3 | 31 | 329 | 23 | 326 | 6.35e-87 | 265 |
MsG0480019419.01.T01 | MTR_7g093370 | 40.419 | 334 | 187 | 5 | 8 | 329 | 34 | 367 | 1.81e-86 | 265 |
MsG0480019419.01.T01 | MTR_2g040000 | 45.066 | 304 | 157 | 4 | 34 | 329 | 26 | 327 | 2.17e-86 | 263 |
MsG0480019419.01.T01 | MTR_4g122640 | 43.854 | 301 | 163 | 4 | 33 | 329 | 34 | 332 | 1.35e-85 | 261 |
MsG0480019419.01.T01 | MTR_1g101830 | 43.408 | 311 | 173 | 3 | 20 | 329 | 10 | 318 | 5.46e-85 | 259 |
MsG0480019419.01.T01 | MTR_3g094670 | 43.478 | 322 | 169 | 5 | 13 | 329 | 5 | 318 | 7.65e-85 | 259 |
MsG0480019419.01.T01 | MTR_3g466180 | 44.586 | 314 | 164 | 3 | 19 | 329 | 13 | 319 | 1.80e-84 | 258 |
MsG0480019419.01.T01 | MTR_4g029170 | 43.218 | 317 | 168 | 5 | 18 | 329 | 8 | 317 | 2.91e-84 | 257 |
MsG0480019419.01.T01 | MTR_1g022970 | 45.183 | 301 | 160 | 3 | 34 | 329 | 43 | 343 | 5.23e-84 | 258 |
MsG0480019419.01.T01 | MTR_2g029815 | 41.772 | 316 | 175 | 4 | 23 | 329 | 11 | 326 | 7.24e-84 | 257 |
MsG0480019419.01.T01 | MTR_5g074760 | 42.236 | 322 | 169 | 6 | 18 | 329 | 3 | 317 | 1.11e-83 | 256 |
MsG0480019419.01.T01 | MTR_5g074740 | 43.671 | 316 | 164 | 5 | 21 | 329 | 9 | 317 | 2.25e-83 | 255 |
MsG0480019419.01.T01 | MTR_4g083710 | 42.154 | 325 | 171 | 7 | 16 | 329 | 2 | 320 | 2.76e-83 | 255 |
MsG0480019419.01.T01 | MTR_7g026990 | 42.089 | 316 | 174 | 2 | 16 | 329 | 10 | 318 | 6.45e-83 | 254 |
MsG0480019419.01.T01 | MTR_3g094630 | 43.789 | 322 | 168 | 5 | 13 | 329 | 5 | 318 | 8.20e-83 | 254 |
MsG0480019419.01.T01 | MTR_2g029820 | 41.722 | 302 | 171 | 3 | 33 | 329 | 25 | 326 | 1.36e-81 | 252 |
MsG0480019419.01.T01 | MTR_4g125940 | 40.312 | 320 | 182 | 4 | 17 | 329 | 8 | 325 | 1.63e-81 | 251 |
MsG0480019419.01.T01 | MTR_5g017850 | 42.405 | 316 | 175 | 5 | 19 | 329 | 9 | 322 | 2.61e-81 | 250 |
MsG0480019419.01.T01 | MTR_2g084010 | 42.006 | 319 | 174 | 4 | 15 | 329 | 3 | 314 | 3.59e-81 | 249 |
MsG0480019419.01.T01 | MTR_4g029200 | 42.953 | 298 | 160 | 3 | 35 | 329 | 44 | 334 | 5.69e-81 | 249 |
MsG0480019419.01.T01 | MTR_2g029830 | 41.667 | 300 | 170 | 3 | 35 | 329 | 26 | 325 | 5.84e-81 | 250 |
MsG0480019419.01.T01 | MTR_2g084080 | 41.956 | 317 | 170 | 4 | 20 | 329 | 4 | 313 | 1.04e-80 | 248 |
MsG0480019419.01.T01 | MTR_5g074710 | 41.925 | 322 | 173 | 5 | 15 | 329 | 3 | 317 | 1.20e-80 | 248 |
MsG0480019419.01.T01 | MTR_1g054205 | 38.438 | 320 | 191 | 4 | 16 | 329 | 3 | 322 | 1.93e-80 | 248 |
MsG0480019419.01.T01 | MTR_5g049280 | 41.176 | 323 | 177 | 6 | 19 | 329 | 12 | 333 | 2.02e-80 | 248 |
MsG0480019419.01.T01 | MTR_4g029180 | 44.558 | 294 | 151 | 5 | 41 | 329 | 31 | 317 | 2.48e-80 | 247 |
MsG0480019419.01.T01 | MTR_4g029190 | 42.444 | 311 | 166 | 5 | 25 | 329 | 33 | 336 | 5.38e-80 | 247 |
MsG0480019419.01.T01 | MTR_2g029560 | 42.000 | 300 | 169 | 3 | 35 | 329 | 22 | 321 | 1.01e-79 | 246 |
MsG0480019419.01.T01 | MTR_2g029860 | 38.125 | 320 | 192 | 4 | 16 | 329 | 7 | 326 | 7.00e-79 | 244 |
MsG0480019419.01.T01 | MTR_2g084020 | 40.752 | 319 | 178 | 4 | 15 | 329 | 3 | 314 | 9.10e-79 | 243 |
MsG0480019419.01.T01 | MTR_5g014100 | 43.667 | 300 | 156 | 5 | 41 | 329 | 30 | 327 | 9.65e-79 | 244 |
MsG0480019419.01.T01 | MTR_1g025980 | 41.587 | 315 | 179 | 5 | 17 | 329 | 3 | 314 | 1.01e-78 | 243 |
MsG0480019419.01.T01 | MTR_2g084110 | 42.006 | 319 | 173 | 5 | 15 | 329 | 3 | 313 | 1.16e-78 | 243 |
MsG0480019419.01.T01 | MTR_2g084090 | 40.694 | 317 | 176 | 5 | 18 | 329 | 5 | 314 | 1.32e-78 | 243 |
MsG0480019419.01.T01 | MTR_2g029730 | 43.189 | 301 | 164 | 4 | 35 | 329 | 23 | 322 | 3.54e-78 | 243 |
MsG0480019419.01.T01 | MTR_7g072510 | 41.026 | 312 | 174 | 3 | 21 | 329 | 4 | 308 | 4.57e-78 | 241 |
MsG0480019419.01.T01 | MTR_5g017860 | 41.139 | 316 | 179 | 5 | 19 | 329 | 9 | 322 | 5.23e-78 | 241 |
MsG0480019419.01.T01 | MTR_2g029850 | 40.728 | 302 | 174 | 3 | 33 | 329 | 25 | 326 | 8.08e-78 | 242 |
MsG0480019419.01.T01 | MTR_4g074995 | 41.270 | 315 | 156 | 7 | 25 | 329 | 9 | 304 | 1.43e-77 | 240 |
MsG0480019419.01.T01 | MTR_2g029910 | 40.264 | 303 | 175 | 4 | 33 | 329 | 26 | 328 | 3.47e-77 | 240 |
MsG0480019419.01.T01 | MTR_3g467600 | 40.625 | 320 | 173 | 7 | 20 | 329 | 8 | 320 | 8.96e-77 | 238 |
MsG0480019419.01.T01 | MTR_2g084000 | 39.677 | 310 | 176 | 4 | 24 | 329 | 13 | 315 | 1.38e-76 | 238 |
MsG0480019419.01.T01 | MTR_3g072190 | 45.850 | 253 | 127 | 3 | 80 | 329 | 2 | 247 | 3.17e-75 | 232 |
MsG0480019419.01.T01 | MTR_4g074990 | 39.937 | 318 | 162 | 6 | 18 | 329 | 7 | 301 | 3.89e-75 | 233 |
MsG0480019419.01.T01 | MTR_7g072480 | 41.667 | 312 | 172 | 3 | 21 | 329 | 8 | 312 | 4.11e-75 | 234 |
MsG0480019419.01.T01 | MTR_4g133800 | 41.837 | 294 | 159 | 7 | 40 | 329 | 44 | 329 | 1.12e-74 | 233 |
MsG0480019419.01.T01 | MTR_5g022870 | 39.683 | 315 | 184 | 5 | 17 | 329 | 2 | 312 | 1.46e-73 | 230 |
MsG0480019419.01.T01 | MTR_4g125940 | 42.435 | 271 | 147 | 4 | 66 | 329 | 2 | 270 | 1.55e-73 | 228 |
MsG0480019419.01.T01 | MTR_8g075100 | 40.532 | 301 | 172 | 5 | 31 | 329 | 20 | 315 | 1.96e-73 | 229 |
MsG0480019419.01.T01 | MTR_0155s0040 | 39.365 | 315 | 173 | 6 | 23 | 329 | 7 | 311 | 2.11e-73 | 229 |
MsG0480019419.01.T01 | MTR_4g046713 | 37.736 | 318 | 193 | 4 | 16 | 329 | 6 | 322 | 2.39e-73 | 229 |
MsG0480019419.01.T01 | MTR_1g077000 | 38.700 | 323 | 179 | 6 | 16 | 329 | 11 | 323 | 2.28e-72 | 227 |
MsG0480019419.01.T01 | MTR_1g115900 | 38.924 | 316 | 179 | 5 | 20 | 329 | 10 | 317 | 2.80e-72 | 227 |
MsG0480019419.01.T01 | MTR_7g029030 | 38.730 | 315 | 184 | 5 | 19 | 329 | 7 | 316 | 9.26e-72 | 225 |
MsG0480019419.01.T01 | MTR_4g087965 | 38.643 | 339 | 173 | 10 | 18 | 329 | 12 | 342 | 5.65e-71 | 224 |
MsG0480019419.01.T01 | MTR_1g009750 | 36.562 | 320 | 190 | 6 | 22 | 329 | 6 | 324 | 3.17e-69 | 219 |
MsG0480019419.01.T01 | MTR_2g088770 | 37.695 | 321 | 192 | 7 | 14 | 329 | 4 | 321 | 1.26e-68 | 218 |
MsG0480019419.01.T01 | MTR_7g107520 | 37.417 | 302 | 182 | 5 | 31 | 329 | 19 | 316 | 6.12e-68 | 216 |
MsG0480019419.01.T01 | MTR_7g086820 | 37.954 | 303 | 168 | 6 | 35 | 329 | 18 | 308 | 6.22e-68 | 215 |
MsG0480019419.01.T01 | MTR_2g437770 | 39.932 | 293 | 163 | 6 | 41 | 329 | 54 | 337 | 6.93e-68 | 216 |
MsG0480019419.01.T01 | MTR_4g074980 | 42.353 | 255 | 133 | 4 | 21 | 267 | 5 | 253 | 4.23e-67 | 211 |
MsG0480019419.01.T01 | MTR_5g016010 | 36.634 | 303 | 186 | 4 | 33 | 329 | 23 | 325 | 4.77e-67 | 213 |
MsG0480019419.01.T01 | MTR_3g092990 | 35.494 | 324 | 203 | 4 | 10 | 329 | 1 | 322 | 7.21e-67 | 213 |
MsG0480019419.01.T01 | MTR_4g074980 | 37.143 | 315 | 163 | 6 | 21 | 329 | 5 | 290 | 3.53e-66 | 210 |
MsG0480019419.01.T01 | MTR_2g008710 | 37.736 | 318 | 186 | 6 | 19 | 329 | 9 | 321 | 8.20e-66 | 210 |
MsG0480019419.01.T01 | MTR_4g114210 | 37.342 | 316 | 184 | 7 | 22 | 329 | 7 | 316 | 6.53e-65 | 207 |
MsG0480019419.01.T01 | MTR_7g086870 | 36.184 | 304 | 169 | 6 | 35 | 329 | 20 | 307 | 1.87e-64 | 206 |
MsG0480019419.01.T01 | MTR_5g074860 | 37.500 | 320 | 143 | 6 | 21 | 329 | 9 | 282 | 4.48e-64 | 204 |
MsG0480019419.01.T01 | MTR_1g038680 | 41.414 | 297 | 167 | 6 | 40 | 329 | 32 | 328 | 5.66e-64 | 206 |
MsG0480019419.01.T01 | MTR_8g062780 | 35.759 | 316 | 196 | 4 | 20 | 329 | 6 | 320 | 7.92e-64 | 205 |
MsG0480019419.01.T01 | MTR_0286s0010 | 37.618 | 319 | 186 | 8 | 19 | 329 | 17 | 330 | 5.61e-63 | 203 |
MsG0480019419.01.T01 | MTR_6g008075 | 37.618 | 319 | 186 | 8 | 19 | 329 | 17 | 330 | 5.61e-63 | 203 |
MsG0480019419.01.T01 | MTR_1g086320 | 37.539 | 317 | 191 | 5 | 20 | 329 | 13 | 329 | 2.95e-62 | 201 |
MsG0480019419.01.T01 | MTR_6g043460 | 35.494 | 324 | 185 | 9 | 21 | 329 | 10 | 324 | 1.55e-61 | 200 |
MsG0480019419.01.T01 | MTR_6g043280 | 37.884 | 293 | 169 | 7 | 41 | 329 | 45 | 328 | 3.99e-61 | 198 |
MsG0480019419.01.T01 | MTR_2g029830 | 40.079 | 252 | 146 | 3 | 83 | 329 | 6 | 257 | 7.11e-61 | 196 |
MsG0480019419.01.T01 | MTR_1g090760 | 35.238 | 315 | 198 | 5 | 21 | 329 | 12 | 326 | 8.27e-61 | 197 |
MsG0480019419.01.T01 | MTR_4g132490 | 33.775 | 302 | 194 | 3 | 32 | 329 | 24 | 323 | 1.54e-60 | 197 |
MsG0480019419.01.T01 | MTR_6g027440 | 34.505 | 313 | 198 | 4 | 19 | 329 | 3 | 310 | 2.22e-60 | 196 |
MsG0480019419.01.T01 | MTR_1g086490 | 37.037 | 324 | 190 | 5 | 20 | 329 | 13 | 336 | 2.30e-60 | 197 |
MsG0480019419.01.T01 | MTR_4g031040 | 59.195 | 174 | 28 | 2 | 96 | 269 | 1 | 131 | 5.71e-60 | 189 |
MsG0480019419.01.T01 | MTR_2g067440 | 34.160 | 363 | 203 | 6 | 1 | 329 | 23 | 383 | 9.91e-60 | 196 |
MsG0480019419.01.T01 | MTR_5g033470 | 36.721 | 305 | 177 | 6 | 37 | 329 | 73 | 373 | 1.18e-59 | 196 |
MsG0480019419.01.T01 | MTR_6g043240 | 37.248 | 298 | 170 | 8 | 37 | 329 | 42 | 327 | 1.75e-59 | 195 |
MsG0480019419.01.T01 | MTR_1g009750 | 34.700 | 317 | 183 | 7 | 22 | 329 | 6 | 307 | 2.28e-58 | 191 |
MsG0480019419.01.T01 | MTR_4g095450 | 34.202 | 307 | 191 | 5 | 29 | 329 | 19 | 320 | 1.29e-57 | 189 |
MsG0480019419.01.T01 | MTR_2g077990 | 35.588 | 340 | 183 | 6 | 25 | 329 | 64 | 402 | 8.77e-57 | 189 |
MsG0480019419.01.T01 | MTR_3g092990 | 33.642 | 324 | 198 | 5 | 10 | 329 | 1 | 311 | 1.13e-56 | 186 |
MsG0480019419.01.T01 | MTR_4g127670 | 35.452 | 299 | 184 | 5 | 37 | 329 | 24 | 319 | 1.15e-56 | 186 |
MsG0480019419.01.T01 | MTR_2g099175 | 33.555 | 301 | 187 | 5 | 37 | 329 | 36 | 331 | 1.66e-55 | 184 |
MsG0480019419.01.T01 | MTR_2g078280 | 35.276 | 326 | 177 | 5 | 25 | 317 | 64 | 388 | 1.77e-55 | 186 |
MsG0480019419.01.T01 | MTR_2g078610 | 35.000 | 340 | 185 | 6 | 25 | 329 | 64 | 402 | 5.29e-55 | 184 |
MsG0480019419.01.T01 | MTR_1g066380 | 33.444 | 302 | 187 | 5 | 35 | 329 | 25 | 319 | 1.42e-54 | 181 |
MsG0480019419.01.T01 | MTR_1g066640 | 32.450 | 302 | 190 | 5 | 35 | 329 | 25 | 319 | 2.77e-53 | 178 |
MsG0480019419.01.T01 | MTR_2g008160 | 36.066 | 305 | 182 | 8 | 33 | 329 | 20 | 319 | 4.27e-52 | 175 |
MsG0480019419.01.T01 | MTR_1g066710 | 32.119 | 302 | 191 | 6 | 35 | 329 | 25 | 319 | 4.69e-52 | 175 |
MsG0480019419.01.T01 | MTR_4g132110 | 31.385 | 325 | 201 | 7 | 20 | 329 | 7 | 324 | 4.91e-52 | 175 |
MsG0480019419.01.T01 | MTR_1g066680 | 33.113 | 302 | 187 | 6 | 35 | 329 | 25 | 318 | 9.65e-52 | 174 |
MsG0480019419.01.T01 | MTR_4g132110 | 30.909 | 330 | 201 | 8 | 20 | 329 | 7 | 329 | 1.14e-49 | 169 |
MsG0480019419.01.T01 | MTR_2g008730 | 33.962 | 318 | 174 | 7 | 19 | 329 | 9 | 297 | 8.29e-49 | 166 |
MsG0480019419.01.T01 | MTR_3g105790 | 32.710 | 321 | 207 | 6 | 14 | 329 | 2 | 318 | 1.96e-48 | 165 |
MsG0480019419.01.T01 | MTR_2g067450 | 33.981 | 309 | 187 | 6 | 31 | 329 | 5 | 306 | 3.98e-47 | 161 |
MsG0480019419.01.T01 | MTR_0147s0010 | 31.329 | 316 | 180 | 7 | 37 | 329 | 77 | 378 | 1.82e-44 | 156 |
MsG0480019419.01.T01 | MTR_3g072210 | 42.857 | 189 | 92 | 5 | 148 | 329 | 55 | 234 | 4.85e-41 | 143 |
MsG0480019419.01.T01 | MTR_1g066380 | 32.422 | 256 | 159 | 5 | 81 | 329 | 3 | 251 | 6.72e-41 | 144 |
MsG0480019419.01.T01 | MTR_2g008160 | 32.131 | 305 | 159 | 8 | 33 | 329 | 20 | 284 | 1.89e-39 | 140 |
MsG0480019419.01.T01 | MTR_2g008160 | 40.805 | 174 | 99 | 3 | 33 | 206 | 20 | 189 | 8.81e-39 | 136 |
MsG0480019419.01.T01 | MTR_3g072260 | 47.727 | 132 | 65 | 1 | 17 | 144 | 2 | 133 | 9.57e-38 | 132 |
MsG0480019419.01.T01 | MTR_5g074700 | 37.778 | 225 | 116 | 6 | 110 | 329 | 5 | 210 | 1.05e-37 | 134 |
MsG0480019419.01.T01 | MTR_7g072490 | 35.043 | 234 | 92 | 4 | 83 | 316 | 2 | 175 | 5.04e-34 | 124 |
MsG0480019419.01.T01 | MTR_2g029880 | 36.364 | 187 | 102 | 4 | 149 | 329 | 9 | 184 | 4.13e-32 | 119 |
MsG0480019419.01.T01 | MTR_3g105790 | 33.913 | 230 | 141 | 6 | 108 | 329 | 16 | 242 | 2.41e-30 | 115 |
MsG0480019419.01.T01 | MTR_7g086790 | 33.508 | 191 | 106 | 5 | 84 | 274 | 17 | 186 | 2.96e-23 | 95.5 |
MsG0480019419.01.T01 | MTR_2g077980 | 31.295 | 278 | 136 | 11 | 99 | 329 | 11 | 280 | 3.50e-23 | 97.4 |
MsG0480019419.01.T01 | MTR_5g058120 | 35.625 | 160 | 89 | 4 | 173 | 329 | 7 | 155 | 2.92e-22 | 94.4 |
MsG0480019419.01.T01 | MTR_2g078560 | 28.205 | 273 | 145 | 6 | 108 | 329 | 44 | 316 | 5.03e-22 | 95.1 |
MsG0480019419.01.T01 | MTR_6g048160 | 54.167 | 72 | 29 | 2 | 75 | 146 | 21 | 88 | 2.28e-18 | 79.3 |
MsG0480019419.01.T01 | MTR_4g114220 | 46.429 | 84 | 35 | 2 | 63 | 146 | 29 | 102 | 3.63e-17 | 77.4 |
MsG0480019419.01.T01 | MTR_7g086810 | 32.500 | 120 | 55 | 2 | 35 | 154 | 4 | 97 | 7.03e-16 | 76.3 |
MsG0480019419.01.T01 | MTR_1g089005 | 33.333 | 126 | 77 | 2 | 29 | 148 | 7 | 131 | 7.73e-16 | 74.3 |
MsG0480019419.01.T01 | MTR_3g462850 | 34.058 | 138 | 81 | 5 | 201 | 329 | 9 | 145 | 2.45e-15 | 72.8 |
MsG0480019419.01.T01 | MTR_4g012865 | 39.726 | 73 | 35 | 1 | 37 | 100 | 77 | 149 | 1.17e-12 | 65.1 |
MsG0480019419.01.T01 | MTR_1g098320 | 43.243 | 74 | 40 | 1 | 258 | 329 | 47 | 120 | 1.35e-12 | 64.7 |
MsG0480019419.01.T01 | MTR_7g086785 | 29.496 | 139 | 92 | 2 | 83 | 221 | 4 | 136 | 1.51e-12 | 64.7 |
MsG0480019419.01.T01 | MTR_2g029930 | 33.333 | 108 | 43 | 3 | 23 | 115 | 1 | 94 | 2.78e-12 | 62.8 |
MsG0480019419.01.T01 | MTR_3g107060 | 29.878 | 164 | 91 | 6 | 52 | 207 | 91 | 238 | 1.24e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019419.01.T01 | AT2G22420 | 71.521 | 309 | 88 | 0 | 21 | 329 | 7 | 315 | 3.93e-171 | 478 |
MsG0480019419.01.T01 | AT2G18150 | 43.210 | 324 | 171 | 4 | 19 | 329 | 9 | 332 | 3.06e-93 | 281 |
MsG0480019419.01.T01 | AT5G06720 | 44.025 | 318 | 166 | 4 | 24 | 329 | 12 | 329 | 3.73e-92 | 278 |
MsG0480019419.01.T01 | AT4G36430 | 45.791 | 297 | 157 | 3 | 37 | 329 | 30 | 326 | 4.26e-92 | 278 |
MsG0480019419.01.T01 | AT5G06730 | 42.902 | 317 | 169 | 4 | 25 | 329 | 14 | 330 | 1.11e-90 | 275 |
MsG0480019419.01.T01 | AT5G19890 | 44.444 | 324 | 170 | 5 | 12 | 329 | 4 | 323 | 1.46e-90 | 274 |
MsG0480019419.01.T01 | AT5G66390 | 44.108 | 297 | 162 | 3 | 37 | 329 | 33 | 329 | 1.08e-89 | 272 |
MsG0480019419.01.T01 | AT2G18140 | 45.973 | 298 | 157 | 3 | 36 | 329 | 34 | 331 | 8.94e-89 | 270 |
MsG0480019419.01.T01 | AT4G16270 | 46.758 | 293 | 152 | 4 | 40 | 329 | 53 | 344 | 7.79e-88 | 268 |
MsG0480019419.01.T01 | AT2G38390 | 43.894 | 303 | 164 | 4 | 33 | 329 | 27 | 329 | 6.70e-86 | 263 |
MsG0480019419.01.T01 | AT5G05340 | 43.092 | 304 | 159 | 4 | 32 | 329 | 25 | 320 | 2.13e-85 | 260 |
MsG0480019419.01.T01 | AT3G50990 | 42.475 | 299 | 168 | 3 | 35 | 329 | 39 | 337 | 5.72e-85 | 260 |
MsG0480019419.01.T01 | AT1G44970 | 44.333 | 300 | 162 | 3 | 35 | 329 | 43 | 342 | 2.02e-84 | 259 |
MsG0480019419.01.T01 | AT4G08780 | 42.671 | 307 | 169 | 4 | 30 | 329 | 17 | 323 | 2.14e-84 | 259 |
MsG0480019419.01.T01 | AT5G19880 | 43.438 | 320 | 173 | 5 | 18 | 329 | 6 | 325 | 4.17e-84 | 257 |
MsG0480019419.01.T01 | AT2G38380 | 43.564 | 303 | 165 | 4 | 33 | 329 | 27 | 329 | 4.74e-84 | 258 |
MsG0480019419.01.T01 | AT5G58400 | 42.593 | 324 | 173 | 5 | 12 | 329 | 5 | 321 | 7.78e-84 | 256 |
MsG0480019419.01.T01 | AT4G08770 | 42.671 | 307 | 169 | 4 | 30 | 329 | 17 | 323 | 9.32e-84 | 257 |
MsG0480019419.01.T01 | AT3G32980 | 43.607 | 305 | 165 | 4 | 32 | 329 | 26 | 330 | 2.19e-83 | 256 |
MsG0480019419.01.T01 | AT5G51890 | 41.772 | 316 | 180 | 3 | 15 | 328 | 4 | 317 | 2.65e-82 | 252 |
MsG0480019419.01.T01 | AT3G49110 | 42.763 | 304 | 167 | 4 | 33 | 329 | 29 | 332 | 6.82e-82 | 253 |
MsG0480019419.01.T01 | AT1G68850 | 39.577 | 331 | 176 | 7 | 20 | 329 | 4 | 331 | 9.23e-81 | 249 |
MsG0480019419.01.T01 | AT3G49120 | 41.311 | 305 | 172 | 4 | 32 | 329 | 27 | 331 | 5.07e-80 | 248 |
MsG0480019419.01.T01 | AT1G14540 | 40.317 | 315 | 178 | 4 | 19 | 329 | 3 | 311 | 7.68e-80 | 246 |
MsG0480019419.01.T01 | AT5G42180 | 40.446 | 314 | 183 | 4 | 17 | 329 | 3 | 313 | 9.05e-79 | 243 |
MsG0480019419.01.T01 | AT1G49570 | 42.715 | 302 | 167 | 4 | 34 | 329 | 45 | 346 | 9.69e-79 | 244 |
MsG0480019419.01.T01 | AT5G58390 | 41.905 | 315 | 170 | 5 | 21 | 329 | 5 | 312 | 3.36e-78 | 242 |
MsG0480019419.01.T01 | AT2G35380 | 44.371 | 302 | 159 | 5 | 37 | 329 | 30 | 331 | 3.68e-77 | 240 |
MsG0480019419.01.T01 | AT5G17820 | 38.486 | 317 | 182 | 6 | 16 | 329 | 3 | 309 | 9.02e-76 | 235 |
MsG0480019419.01.T01 | AT1G14550 | 39.873 | 316 | 176 | 6 | 22 | 329 | 8 | 317 | 1.05e-75 | 236 |
MsG0480019419.01.T01 | AT5G17820 | 38.318 | 321 | 185 | 6 | 12 | 329 | 52 | 362 | 4.39e-75 | 235 |
MsG0480019419.01.T01 | AT3G49960 | 38.994 | 318 | 187 | 5 | 19 | 329 | 8 | 325 | 6.57e-74 | 231 |
MsG0480019419.01.T01 | AT4G33420 | 41.924 | 291 | 157 | 5 | 41 | 329 | 41 | 321 | 3.46e-71 | 224 |
MsG0480019419.01.T01 | AT3G03670 | 37.072 | 321 | 190 | 4 | 16 | 329 | 2 | 317 | 3.57e-71 | 224 |
MsG0480019419.01.T01 | AT4G33420 | 41.924 | 291 | 157 | 5 | 41 | 329 | 88 | 368 | 8.14e-71 | 224 |
MsG0480019419.01.T01 | AT5G39580 | 38.339 | 313 | 183 | 7 | 21 | 329 | 9 | 315 | 4.17e-70 | 221 |
MsG0480019419.01.T01 | AT5G64120 | 37.888 | 322 | 180 | 8 | 22 | 329 | 9 | 324 | 8.64e-70 | 221 |
MsG0480019419.01.T01 | AT4G37520 | 37.874 | 301 | 181 | 4 | 35 | 329 | 25 | 325 | 1.00e-69 | 220 |
MsG0480019419.01.T01 | AT5G67400 | 38.284 | 303 | 181 | 4 | 33 | 329 | 23 | 325 | 1.33e-69 | 220 |
MsG0480019419.01.T01 | AT3G01190 | 41.875 | 320 | 167 | 10 | 17 | 329 | 10 | 317 | 4.70e-69 | 218 |
MsG0480019419.01.T01 | AT1G05260 | 38.710 | 310 | 183 | 6 | 25 | 329 | 14 | 321 | 6.75e-69 | 218 |
MsG0480019419.01.T01 | AT4G37530 | 38.235 | 306 | 183 | 4 | 30 | 329 | 20 | 325 | 7.21e-69 | 218 |
MsG0480019419.01.T01 | AT1G71695 | 40.000 | 295 | 164 | 6 | 41 | 329 | 48 | 335 | 7.37e-69 | 219 |
MsG0480019419.01.T01 | AT2G41480 | 38.558 | 319 | 178 | 7 | 24 | 329 | 11 | 324 | 1.10e-68 | 218 |
MsG0480019419.01.T01 | AT4G11290 | 37.267 | 322 | 194 | 7 | 15 | 329 | 2 | 322 | 1.90e-68 | 217 |
MsG0480019419.01.T01 | AT4G37520 | 37.209 | 301 | 180 | 5 | 35 | 329 | 25 | 322 | 6.18e-67 | 213 |
MsG0480019419.01.T01 | AT5G15180 | 40.667 | 300 | 165 | 7 | 37 | 329 | 32 | 325 | 5.50e-66 | 211 |
MsG0480019419.01.T01 | AT2G34060 | 38.235 | 340 | 177 | 12 | 17 | 329 | 9 | 342 | 9.81e-66 | 211 |
MsG0480019419.01.T01 | AT1G05240 | 39.322 | 295 | 170 | 6 | 41 | 329 | 30 | 321 | 1.62e-65 | 209 |
MsG0480019419.01.T01 | AT1G05250 | 39.322 | 295 | 170 | 6 | 41 | 329 | 30 | 321 | 1.62e-65 | 209 |
MsG0480019419.01.T01 | AT3G21770 | 38.065 | 310 | 183 | 6 | 26 | 329 | 18 | 324 | 2.00e-65 | 209 |
MsG0480019419.01.T01 | AT1G77100 | 37.538 | 325 | 176 | 9 | 18 | 329 | 5 | 315 | 8.24e-65 | 207 |
MsG0480019419.01.T01 | AT4G30170 | 35.621 | 306 | 179 | 6 | 34 | 329 | 24 | 321 | 5.13e-63 | 203 |
MsG0480019419.01.T01 | AT5G14130 | 33.435 | 329 | 192 | 6 | 16 | 329 | 10 | 326 | 2.29e-62 | 201 |
MsG0480019419.01.T01 | AT1G30870 | 39.661 | 295 | 164 | 7 | 41 | 329 | 55 | 341 | 3.87e-62 | 201 |
MsG0480019419.01.T01 | AT5G14130 | 33.435 | 329 | 192 | 6 | 16 | 329 | 51 | 367 | 8.75e-62 | 201 |
MsG0480019419.01.T01 | AT4G17690 | 38.000 | 300 | 174 | 6 | 36 | 329 | 25 | 318 | 1.74e-61 | 199 |
MsG0480019419.01.T01 | AT3G28200 | 36.789 | 299 | 176 | 5 | 37 | 329 | 21 | 312 | 2.87e-61 | 198 |
MsG0480019419.01.T01 | AT2G18980 | 33.934 | 333 | 193 | 6 | 10 | 329 | 1 | 319 | 2.91e-61 | 198 |
MsG0480019419.01.T01 | AT5G47000 | 37.304 | 319 | 186 | 7 | 20 | 329 | 13 | 326 | 4.75e-61 | 198 |
MsG0480019419.01.T01 | AT4G37530 | 40.000 | 260 | 152 | 3 | 30 | 285 | 20 | 279 | 7.81e-61 | 196 |
MsG0480019419.01.T01 | AT4G25980 | 36.601 | 306 | 182 | 6 | 32 | 329 | 21 | 322 | 8.79e-61 | 197 |
MsG0480019419.01.T01 | AT1G24110 | 32.588 | 313 | 203 | 5 | 23 | 329 | 8 | 318 | 3.27e-59 | 193 |
MsG0480019419.01.T01 | AT4G26010 | 36.164 | 318 | 185 | 8 | 16 | 329 | 2 | 305 | 4.26e-59 | 192 |
MsG0480019419.01.T01 | AT5G40150 | 36.735 | 294 | 176 | 4 | 41 | 329 | 36 | 324 | 4.87e-59 | 193 |
MsG0480019419.01.T01 | AT4G26010 | 36.164 | 318 | 185 | 8 | 16 | 329 | 30 | 333 | 6.61e-59 | 193 |
MsG0480019419.01.T01 | AT5G64100 | 34.545 | 330 | 187 | 9 | 19 | 329 | 8 | 327 | 1.51e-58 | 192 |
MsG0480019419.01.T01 | AT2G39040 | 36.304 | 303 | 181 | 7 | 37 | 329 | 46 | 346 | 6.26e-58 | 191 |
MsG0480019419.01.T01 | AT4G33870 | 33.234 | 334 | 178 | 4 | 37 | 329 | 68 | 397 | 1.52e-57 | 191 |
MsG0480019419.01.T01 | AT4G21960 | 34.304 | 309 | 183 | 7 | 32 | 329 | 24 | 323 | 2.57e-57 | 188 |
MsG0480019419.01.T01 | AT5G64110 | 36.913 | 298 | 176 | 6 | 38 | 329 | 35 | 326 | 8.72e-57 | 187 |
MsG0480019419.01.T01 | AT3G17070 | 33.133 | 332 | 206 | 5 | 11 | 329 | 7 | 335 | 1.60e-56 | 187 |
MsG0480019419.01.T01 | AT5G22410 | 36.877 | 301 | 175 | 7 | 37 | 329 | 28 | 321 | 2.69e-55 | 183 |
MsG0480019419.01.T01 | AT2G24800 | 35.548 | 301 | 184 | 5 | 35 | 329 | 29 | 325 | 4.54e-55 | 182 |
MsG0480019419.01.T01 | AT1G34510 | 35.000 | 320 | 175 | 10 | 20 | 329 | 9 | 305 | 5.94e-54 | 179 |
MsG0480019419.01.T01 | AT2G35380 | 42.387 | 243 | 131 | 5 | 96 | 329 | 1 | 243 | 9.17e-53 | 174 |
MsG0480019419.01.T01 | AT2G37130 | 32.258 | 310 | 195 | 7 | 28 | 329 | 21 | 323 | 2.16e-52 | 176 |
MsG0480019419.01.T01 | AT2G37130 | 32.997 | 297 | 184 | 7 | 41 | 329 | 3 | 292 | 6.61e-52 | 173 |
MsG0480019419.01.T01 | AT2G43480 | 35.117 | 299 | 178 | 6 | 41 | 329 | 39 | 331 | 1.03e-51 | 174 |
MsG0480019419.01.T01 | AT4G31760 | 33.022 | 321 | 199 | 8 | 17 | 329 | 10 | 322 | 3.99e-51 | 172 |
MsG0480019419.01.T01 | AT5G24070 | 32.776 | 299 | 185 | 6 | 41 | 329 | 39 | 331 | 1.72e-48 | 166 |
MsG0480019419.01.T01 | AT5G39580 | 40.206 | 194 | 111 | 3 | 21 | 214 | 9 | 197 | 2.00e-44 | 152 |
MsG0480019419.01.T01 | AT3G17070 | 33.333 | 264 | 164 | 5 | 74 | 329 | 13 | 272 | 1.02e-41 | 146 |
MsG0480019419.01.T01 | AT4G25980 | 42.775 | 173 | 95 | 3 | 32 | 204 | 66 | 234 | 9.08e-40 | 141 |
MsG0480019419.01.T01 | AT2G24800 | 39.691 | 194 | 107 | 4 | 35 | 222 | 29 | 218 | 2.54e-34 | 126 |
MsG0480019419.01.T01 | AT1G77490 | 30.928 | 194 | 109 | 5 | 130 | 317 | 165 | 339 | 4.39e-18 | 84.7 |
MsG0480019419.01.T01 | AT1G77490 | 30.928 | 194 | 109 | 5 | 130 | 317 | 165 | 339 | 5.14e-18 | 84.7 |
MsG0480019419.01.T01 | AT4G08390 | 29.648 | 199 | 111 | 6 | 130 | 320 | 185 | 362 | 1.15e-14 | 74.3 |
MsG0480019419.01.T01 | AT4G08390 | 29.648 | 199 | 111 | 6 | 130 | 320 | 186 | 363 | 1.27e-14 | 74.3 |
MsG0480019419.01.T01 | AT4G08390 | 29.648 | 199 | 111 | 6 | 130 | 320 | 186 | 363 | 1.27e-14 | 74.3 |
MsG0480019419.01.T01 | AT4G08390 | 29.648 | 199 | 111 | 6 | 130 | 320 | 186 | 363 | 1.27e-14 | 74.3 |
MsG0480019419.01.T01 | AT3G42570 | 34.737 | 95 | 61 | 1 | 109 | 202 | 53 | 147 | 1.93e-13 | 67.4 |
Find 61 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCAATTGATCCTGTATTT+AGG | 0.134391 | 4:+19980102 | MsG0480019419.01.T01:CDS |
ATAACTGATGCAACACTTCT+TGG | 0.239498 | 4:-19978711 | None:intergenic |
TGTTGAAGGAATGTTGAAAT+TGG | 0.241814 | 4:+19980337 | MsG0480019419.01.T01:CDS |
CCTAATCTCACTTCCCAATT+AGG | 0.252124 | 4:-19979864 | None:intergenic |
CAACCAAGTCCTTGAAATAT+TGG | 0.258540 | 4:-19980208 | None:intergenic |
TGCAATTGATCCTGTATTTA+GGG | 0.261821 | 4:+19980103 | MsG0480019419.01.T01:CDS |
TGCAGACAGGAGGACCTAAT+TGG | 0.285329 | 4:+19979850 | MsG0480019419.01.T01:intron |
AACTATGCTTGGAGAGAAAT+TGG | 0.290246 | 4:+19979062 | MsG0480019419.01.T01:CDS |
TGGACTTGGCATGATATTAC+TGG | 0.322076 | 4:-19979922 | None:intergenic |
ACTCTCAGGATCACACTCTA+TGG | 0.326808 | 4:+19980013 | MsG0480019419.01.T01:CDS |
TTGAACCATGTTTGTGTTAG+TGG | 0.346130 | 4:-19978532 | None:intergenic |
GGAAGTGAGATTAGGAAGAT+TGG | 0.383464 | 4:+19979872 | MsG0480019419.01.T01:CDS |
CTGATAAGCCTGGTCAAGTT+AGG | 0.391273 | 4:+19980372 | MsG0480019419.01.T01:CDS |
AAGGACTTGGTTGGTGGAAG+GGG | 0.412024 | 4:+19980218 | MsG0480019419.01.T01:CDS |
TTGTGCTGATATCATAATCA+TGG | 0.414358 | 4:+19979173 | MsG0480019419.01.T01:CDS |
GTTGAAGGAATGTTGAAATT+GGG | 0.420650 | 4:+19980338 | MsG0480019419.01.T01:CDS |
CTAAATACAGGATCAATTGC+AGG | 0.420661 | 4:-19980101 | None:intergenic |
CTGACAATTGTTTCAGCTTG+TGG | 0.421262 | 4:-19978657 | None:intergenic |
TGAAGTTGTTGATGAGGTTA+CGG | 0.424842 | 4:+19979116 | MsG0480019419.01.T01:CDS |
TCAAGTTCTTCCCTAAATAC+AGG | 0.427013 | 4:-19980113 | None:intergenic |
TTTCGATAACCAATATTTCA+AGG | 0.438590 | 4:+19980199 | MsG0480019419.01.T01:CDS |
CAAGGACTTGGTTGGTGGAA+GGG | 0.442363 | 4:+19980217 | MsG0480019419.01.T01:CDS |
TTCTAGAGATGCTGTAGCAC+TGG | 0.460212 | 4:+19979197 | MsG0480019419.01.T01:CDS |
GCAGACAGGAGGACCTAATT+GGG | 0.460309 | 4:+19979851 | MsG0480019419.01.T01:intron |
CAATTCTTCCTAACTTGACC+AGG | 0.463130 | 4:-19980380 | None:intergenic |
CCTAATTGGGAAGTGAGATT+AGG | 0.463783 | 4:+19979864 | MsG0480019419.01.T01:CDS |
TAACCAATATTTCAAGGACT+TGG | 0.464692 | 4:+19980205 | MsG0480019419.01.T01:CDS |
AGGGTCAGGCTTTCCGCTAC+CGG | 0.465665 | 4:-19980081 | None:intergenic |
AAAGACCTTGTAGCACTCTC+AGG | 0.475027 | 4:+19979999 | MsG0480019419.01.T01:CDS |
AGAGCAGTGGCATTAGATCT+TGG | 0.483837 | 4:-19979942 | None:intergenic |
ACAGGATCAATTGCAGGGTC+AGG | 0.489409 | 4:-19980095 | None:intergenic |
TGTTAGTGGAAAGAAGAGAC+AGG | 0.494058 | 4:-19978518 | None:intergenic |
GCTTTAGAGAAGGCTTGTCC+TGG | 0.494063 | 4:+19979141 | MsG0480019419.01.T01:CDS |
TCAAGGACTTGGTTGGTGGA+AGG | 0.501873 | 4:+19980216 | MsG0480019419.01.T01:CDS |
CAATATTTCAAGGACTTGGT+TGG | 0.502030 | 4:+19980209 | MsG0480019419.01.T01:CDS |
AATTTCTCTCCAAGCATAGT+TGG | 0.513582 | 4:-19979060 | None:intergenic |
TAATTTGTGCAGGGGTGTGA+TGG | 0.515516 | 4:+19979015 | MsG0480019419.01.T01:intron |
GTGGCATTAGATCTTGGACT+TGG | 0.525131 | 4:-19979936 | None:intergenic |
ATCATTTGAAGTTGTTGATG+AGG | 0.525248 | 4:+19979110 | MsG0480019419.01.T01:CDS |
GATGTTGATCAAAACAAGAC+AGG | 0.532101 | 4:+19980152 | MsG0480019419.01.T01:CDS |
ACATCAGCGGATCTTCGACC+TGG | 0.537774 | 4:+19978615 | MsG0480019419.01.T01:CDS |
TATTTCAAGGACTTGGTTGG+TGG | 0.538804 | 4:+19980212 | MsG0480019419.01.T01:CDS |
AAATCACAGGAGTTGCATCA+AGG | 0.548807 | 4:-19980178 | None:intergenic |
GATGATACACCAACTATGCT+TGG | 0.551588 | 4:+19979051 | MsG0480019419.01.T01:CDS |
TTTCGGCTATACAATCAATC+CGG | 0.568350 | 4:+19980062 | MsG0480019419.01.T01:CDS |
TCCCTTTCATTGCAGACAGG+AGG | 0.569641 | 4:+19979840 | MsG0480019419.01.T01:intron |
CTCTCAGGATCACACTCTAT+GGG | 0.574191 | 4:+19980014 | MsG0480019419.01.T01:CDS |
GACTTGCAGTCTGATAAGCC+TGG | 0.574994 | 4:+19980362 | MsG0480019419.01.T01:CDS |
GGTTACGGAGGCTTTAGAGA+AGG | 0.587989 | 4:+19979131 | MsG0480019419.01.T01:CDS |
TATTGGTTATCGAAAATCAC+AGG | 0.593232 | 4:-19980191 | None:intergenic |
CATCAGCGGATCTTCGACCT+GGG | 0.594622 | 4:+19978616 | MsG0480019419.01.T01:CDS |
CTATACAATCAATCCGGTAG+CGG | 0.596485 | 4:+19980068 | MsG0480019419.01.T01:CDS |
TCTTTCCACTAACACAAACA+TGG | 0.603005 | 4:+19978527 | MsG0480019419.01.T01:CDS |
GTGATCCTGAGAGTGCTACA+AGG | 0.617824 | 4:-19980004 | None:intergenic |
GAAGAGATTAATGAGAGCAG+TGG | 0.625249 | 4:-19979955 | None:intergenic |
TAAATACAGGATCAATTGCA+GGG | 0.640618 | 4:-19980100 | None:intergenic |
TGGAAGGGGATTTCTCAACT+CGG | 0.657592 | 4:+19980232 | MsG0480019419.01.T01:CDS |
TCAGCACAAGAAACAACACC+AGG | 0.669733 | 4:-19979159 | None:intergenic |
AGTTGTTGATGAGGTTACGG+AGG | 0.670605 | 4:+19979119 | MsG0480019419.01.T01:CDS |
CATAATCATAGTAACATCAG+CGG | 0.678749 | 4:+19978602 | MsG0480019419.01.T01:CDS |
GAAGATCAGAAACATAAACA+TGG | 0.722748 | 4:-19978571 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTTAAAAAATAATAATA+GGG | - | Chr4:19978924-19978943 | None:intergenic | 0.0% |
!! | TTTATTTAAAAAATAATAAT+AGG | - | Chr4:19978925-19978944 | None:intergenic | 0.0% |
!!! | ATAATTGCAATAAAATTTTT+TGG | + | Chr4:19978868-19978887 | MsG0480019419.01.T01:intron | 10.0% |
!!! | TAATTTTATGATTTATGAAA+AGG | + | Chr4:19979244-19979263 | MsG0480019419.01.T01:intron | 10.0% |
!!! | TGATAAAATAAATCTATTTT+AGG | + | Chr4:19979488-19979507 | MsG0480019419.01.T01:intron | 10.0% |
!!! | TTTATAAAATGATTTTTCTT+TGG | + | Chr4:19978978-19978997 | MsG0480019419.01.T01:intron | 10.0% |
!! | AATGAAAGGGAAATAAAAAT+AGG | - | Chr4:19979831-19979850 | None:intergenic | 20.0% |
!! | ATGAAAGGGAAATAAAAATA+GGG | - | Chr4:19979830-19979849 | None:intergenic | 20.0% |
!! | CTAATTTATATGGACAATAT+TGG | - | Chr4:19979621-19979640 | None:intergenic | 20.0% |
!! | GATAATGTGTCTAATTTATA+TGG | - | Chr4:19979631-19979650 | None:intergenic | 20.0% |
! | AGCTACAAATTAGATCAATA+TGG | - | Chr4:19979567-19979586 | None:intergenic | 25.0% |
! | ATATGGACAATATTGGAAAA+GGG | - | Chr4:19979614-19979633 | None:intergenic | 25.0% |
! | TATATGGACAATATTGGAAA+AGG | - | Chr4:19979615-19979634 | None:intergenic | 25.0% |
! | TATCGAGAAGAAAATAGATT+TGG | + | Chr4:19979647-19979666 | MsG0480019419.01.T01:intron | 25.0% |
! | TTTCGATAACCAATATTTCA+AGG | + | Chr4:19980199-19980218 | MsG0480019419.01.T01:CDS | 25.0% |
!!! | GTTGTTTTTCAATCATGTTT+CGG | + | Chr4:19980045-19980064 | MsG0480019419.01.T01:CDS | 25.0% |
!!! | TATGGTAAACATTTTAGCAT+TGG | - | Chr4:19979549-19979568 | None:intergenic | 25.0% |
!!! | TTTTTCAAAGCATTTGTTGA+AGG | + | Chr4:19980323-19980342 | MsG0480019419.01.T01:CDS | 25.0% |
ACAGTTTGATCTCGAATTTA+AGG | + | Chr4:19979705-19979724 | MsG0480019419.01.T01:intron | 30.0% | |
CATAATCATAGTAACATCAG+CGG | + | Chr4:19978602-19978621 | MsG0480019419.01.T01:CDS | 30.0% | |
GAAGATCAGAAACATAAACA+TGG | - | Chr4:19978574-19978593 | None:intergenic | 30.0% | |
GTTGAAGGAATGTTGAAATT+GGG | + | Chr4:19980338-19980357 | MsG0480019419.01.T01:CDS | 30.0% | |
TAAATACAGGATCAATTGCA+GGG | - | Chr4:19980103-19980122 | None:intergenic | 30.0% | |
TAACCAATATTTCAAGGACT+TGG | + | Chr4:19980205-19980224 | MsG0480019419.01.T01:CDS | 30.0% | |
TGCAATTGATCCTGTATTTA+GGG | + | Chr4:19980103-19980122 | MsG0480019419.01.T01:CDS | 30.0% | |
TGTTGAAGGAATGTTGAAAT+TGG | + | Chr4:19980337-19980356 | MsG0480019419.01.T01:CDS | 30.0% | |
! | ATCATTTGAAGTTGTTGATG+AGG | + | Chr4:19979110-19979129 | MsG0480019419.01.T01:CDS | 30.0% |
! | GGATCTCATTAATTTGAGAT+CGG | - | Chr4:19979777-19979796 | None:intergenic | 30.0% |
! | TAACACTGAGCTTGTATTTT+TGG | - | Chr4:19979980-19979999 | None:intergenic | 30.0% |
! | TATTGGTTATCGAAAATCAC+AGG | - | Chr4:19980194-19980213 | None:intergenic | 30.0% |
! | TTGTGCTGATATCATAATCA+TGG | + | Chr4:19979173-19979192 | MsG0480019419.01.T01:CDS | 30.0% |
!! | ATGAGTTGTTTAATTTGTGC+AGG | + | Chr4:19979005-19979024 | MsG0480019419.01.T01:intron | 30.0% |
!! | TCACTTTTCCACAAACAAAA+GGG | + | Chr4:19980267-19980286 | MsG0480019419.01.T01:CDS | 30.0% |
!! | TGAGTTGTTTAATTTGTGCA+GGG | + | Chr4:19979006-19979025 | MsG0480019419.01.T01:intron | 30.0% |
!! | TTCACTTTTCCACAAACAAA+AGG | + | Chr4:19980266-19980285 | MsG0480019419.01.T01:CDS | 30.0% |
AACTATGCTTGGAGAGAAAT+TGG | + | Chr4:19979062-19979081 | MsG0480019419.01.T01:CDS | 35.0% | |
AATTTCTCTCCAAGCATAGT+TGG | - | Chr4:19979063-19979082 | None:intergenic | 35.0% | |
ATAACTGATGCAACACTTCT+TGG | - | Chr4:19978714-19978733 | None:intergenic | 35.0% | |
CAACCAAGTCCTTGAAATAT+TGG | - | Chr4:19980211-19980230 | None:intergenic | 35.0% | |
CTAAATACAGGATCAATTGC+AGG | - | Chr4:19980104-19980123 | None:intergenic | 35.0% | |
CTGCAATTGATCCTGTATTT+AGG | + | Chr4:19980102-19980121 | MsG0480019419.01.T01:CDS | 35.0% | |
GATGTTGATCAAAACAAGAC+AGG | + | Chr4:19980152-19980171 | MsG0480019419.01.T01:CDS | 35.0% | |
TCAAGTTCTTCCCTAAATAC+AGG | - | Chr4:19980116-19980135 | None:intergenic | 35.0% | |
TCTTTCCACTAACACAAACA+TGG | + | Chr4:19978527-19978546 | MsG0480019419.01.T01:CDS | 35.0% | |
TGGAGAAACACACAAAAGAT+TGG | - | Chr4:19979529-19979548 | None:intergenic | 35.0% | |
TTGAACCATGTTTGTGTTAG+TGG | - | Chr4:19978535-19978554 | None:intergenic | 35.0% | |
TTTCGGCTATACAATCAATC+CGG | + | Chr4:19980062-19980081 | MsG0480019419.01.T01:CDS | 35.0% | |
! | CAATATTTCAAGGACTTGGT+TGG | + | Chr4:19980209-19980228 | MsG0480019419.01.T01:CDS | 35.0% |
! | CTCATTAATTTGAGATCGGA+TGG | - | Chr4:19979773-19979792 | None:intergenic | 35.0% |
! | TGAAGTTGTTGATGAGGTTA+CGG | + | Chr4:19979116-19979135 | MsG0480019419.01.T01:CDS | 35.0% |
!! | GAGTTGTTTAATTTGTGCAG+GGG | + | Chr4:19979007-19979026 | MsG0480019419.01.T01:intron | 35.0% |
!!! | CATGTTTTTGAGTAATACCC+AGG | - | Chr4:19978636-19978655 | None:intergenic | 35.0% |
!!! | TTGTTTTGATCAACATCTCG+AGG | - | Chr4:19980149-19980168 | None:intergenic | 35.0% |
AAATCACAGGAGTTGCATCA+AGG | - | Chr4:19980181-19980200 | None:intergenic | 40.0% | |
ATTTCCCTTTCATTGCAGAC+AGG | + | Chr4:19979837-19979856 | MsG0480019419.01.T01:intron | 40.0% | |
CAATTCTTCCTAACTTGACC+AGG | - | Chr4:19980383-19980402 | None:intergenic | 40.0% | |
CCTAATCTCACTTCCCAATT+AGG | - | Chr4:19979867-19979886 | None:intergenic | 40.0% | |
CCTAATTGGGAAGTGAGATT+AGG | + | Chr4:19979864-19979883 | MsG0480019419.01.T01:CDS | 40.0% | |
CTATACAATCAATCCGGTAG+CGG | + | Chr4:19980068-19980087 | MsG0480019419.01.T01:CDS | 40.0% | |
CTGACAATTGTTTCAGCTTG+TGG | - | Chr4:19978660-19978679 | None:intergenic | 40.0% | |
GAAGAGATTAATGAGAGCAG+TGG | - | Chr4:19979958-19979977 | None:intergenic | 40.0% | |
GATGATACACCAACTATGCT+TGG | + | Chr4:19979051-19979070 | MsG0480019419.01.T01:CDS | 40.0% | |
GGAAGTGAGATTAGGAAGAT+TGG | + | Chr4:19979872-19979891 | MsG0480019419.01.T01:CDS | 40.0% | |
TGGACTTGGCATGATATTAC+TGG | - | Chr4:19979925-19979944 | None:intergenic | 40.0% | |
TTGAATATGCAGTCTCAGCA+AGG | - | Chr4:19979804-19979823 | None:intergenic | 40.0% | |
! | TATTTCAAGGACTTGGTTGG+TGG | + | Chr4:19980212-19980231 | MsG0480019419.01.T01:CDS | 40.0% |
!! | CTCACAAACCCTTTTGTTTG+TGG | - | Chr4:19980278-19980297 | None:intergenic | 40.0% |
AAAGACCTTGTAGCACTCTC+AGG | + | Chr4:19979999-19980018 | MsG0480019419.01.T01:CDS | 45.0% | |
ACTCTCAGGATCACACTCTA+TGG | + | Chr4:19980013-19980032 | MsG0480019419.01.T01:CDS | 45.0% | |
AGAGCAGTGGCATTAGATCT+TGG | - | Chr4:19979945-19979964 | None:intergenic | 45.0% | |
CTCTCAGGATCACACTCTAT+GGG | + | Chr4:19980014-19980033 | MsG0480019419.01.T01:CDS | 45.0% | |
CTGATAAGCCTGGTCAAGTT+AGG | + | Chr4:19980372-19980391 | MsG0480019419.01.T01:CDS | 45.0% | |
GTGGCATTAGATCTTGGACT+TGG | - | Chr4:19979939-19979958 | None:intergenic | 45.0% | |
TCAGCACAAGAAACAACACC+AGG | - | Chr4:19979162-19979181 | None:intergenic | 45.0% | |
TCCTCCTGTCTGCAATGAAA+GGG | - | Chr4:19979844-19979863 | None:intergenic | 45.0% | |
TGGAAGGGGATTTCTCAACT+CGG | + | Chr4:19980232-19980251 | MsG0480019419.01.T01:CDS | 45.0% | |
! | AGTTGTTGATGAGGTTACGG+AGG | + | Chr4:19979119-19979138 | MsG0480019419.01.T01:CDS | 45.0% |
! | TAATTTGTGCAGGGGTGTGA+TGG | + | Chr4:19979015-19979034 | MsG0480019419.01.T01:intron | 45.0% |
! | TTCTAGAGATGCTGTAGCAC+TGG | + | Chr4:19979197-19979216 | MsG0480019419.01.T01:CDS | 45.0% |
!!! | TTTTTAAATAAAATAATGAT+AGG | + | Chr4:19978933-19978952 | MsG0480019419.01.T01:intron | 5.0% |
ACAGGATCAATTGCAGGGTC+AGG | - | Chr4:19980098-19980117 | None:intergenic | 50.0% | |
ATGCAGTCTCAGCAAGGATC+TGG | - | Chr4:19979798-19979817 | None:intergenic | 50.0% | |
GACTTGCAGTCTGATAAGCC+TGG | + | Chr4:19980362-19980381 | MsG0480019419.01.T01:CDS | 50.0% | |
GCAGACAGGAGGACCTAATT+GGG | + | Chr4:19979851-19979870 | MsG0480019419.01.T01:intron | 50.0% | |
GTCCTCCTGTCTGCAATGAA+AGG | - | Chr4:19979845-19979864 | None:intergenic | 50.0% | |
TCCCTTTCATTGCAGACAGG+AGG | + | Chr4:19979840-19979859 | MsG0480019419.01.T01:intron | 50.0% | |
TGCAGACAGGAGGACCTAAT+TGG | + | Chr4:19979850-19979869 | MsG0480019419.01.T01:intron | 50.0% | |
!! | AAGGACTTGGTTGGTGGAAG+GGG | + | Chr4:19980218-19980237 | MsG0480019419.01.T01:CDS | 50.0% |
!! | CAAGGACTTGGTTGGTGGAA+GGG | + | Chr4:19980217-19980236 | MsG0480019419.01.T01:CDS | 50.0% |
!! | GCTTTAGAGAAGGCTTGTCC+TGG | + | Chr4:19979141-19979160 | MsG0480019419.01.T01:CDS | 50.0% |
!! | GGTTACGGAGGCTTTAGAGA+AGG | + | Chr4:19979131-19979150 | MsG0480019419.01.T01:CDS | 50.0% |
!! | GTGATCCTGAGAGTGCTACA+AGG | - | Chr4:19980007-19980026 | None:intergenic | 50.0% |
!! | TCAAGGACTTGGTTGGTGGA+AGG | + | Chr4:19980216-19980235 | MsG0480019419.01.T01:CDS | 50.0% |
ACATCAGCGGATCTTCGACC+TGG | + | Chr4:19978615-19978634 | MsG0480019419.01.T01:CDS | 55.0% | |
CATCAGCGGATCTTCGACCT+GGG | + | Chr4:19978616-19978635 | MsG0480019419.01.T01:CDS | 55.0% | |
AGGGTCAGGCTTTCCGCTAC+CGG | - | Chr4:19980084-19980103 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 19978519 | 19980406 | 19978519 | ID=MsG0480019419.01;Name=MsG0480019419.01 |
Chr4 | mRNA | 19978519 | 19980406 | 19978519 | ID=MsG0480019419.01.T01;Parent=MsG0480019419.01;Name=MsG0480019419.01.T01;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|3|0|329 |
Chr4 | exon | 19978519 | 19978764 | 19978519 | ID=MsG0480019419.01.T01:exon:7913;Parent=MsG0480019419.01.T01 |
Chr4 | exon | 19979027 | 19979218 | 19979027 | ID=MsG0480019419.01.T01:exon:7914;Parent=MsG0480019419.01.T01 |
Chr4 | exon | 19979855 | 19980406 | 19979855 | ID=MsG0480019419.01.T01:exon:7915;Parent=MsG0480019419.01.T01 |
Chr4 | CDS | 19978519 | 19978764 | 19978519 | ID=MsG0480019419.01.T01:cds;Parent=MsG0480019419.01.T01 |
Chr4 | CDS | 19979027 | 19979218 | 19979027 | ID=MsG0480019419.01.T01:cds;Parent=MsG0480019419.01.T01 |
Chr4 | CDS | 19979855 | 19980406 | 19979855 | ID=MsG0480019419.01.T01:cds;Parent=MsG0480019419.01.T01 |
Gene Sequence |
Protein sequence |