AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019969.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019969.01.T01 MTR_0004s0490 97.749 844 7 2 1 842 1 834 0.0 1674
MsG0480019969.01.T01 MTR_6g005610 88.955 842 79 3 1 842 1 828 0.0 1527
MsG0480019969.01.T01 MTR_6g005670 80.262 841 78 8 2 842 3 755 0.0 1323
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019969.01.T01 AT5G51430 75.383 849 188 6 1 841 1 836 0.0 1286

Find 213 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCCCAAAGCTGCTTTAT+TGG 0.148880 4:-30965733 None:intergenic
AATCAACTCTCCGTGCATTT+TGG 0.232879 4:-30968462 None:intergenic
TGTTTGTCTAAGGACTCTTC+TGG 0.234573 4:-30964512 None:intergenic
GATGAAAACCAGACTATAAA+TGG 0.284217 4:+30968649 MsG0480019969.01.T01:CDS
GCTGAGTTGATCCATTTCTT+TGG 0.287865 4:-30964473 None:intergenic
CAAAAGGCTGAAGAGTTTCC+TGG 0.293608 4:-30968755 None:intergenic
AATTGGAAGGTTTAAGTCTC+TGG 0.315900 4:+30965681 MsG0480019969.01.T01:CDS
CTGAGTTGATCCATTTCTTT+GGG 0.320962 4:-30964472 None:intergenic
CAGCAAGGGGCTCCAATTGT+TGG 0.331274 4:-30969931 None:intergenic
TAAAACCAATAAAGCAGCTT+TGG 0.333061 4:+30965728 MsG0480019969.01.T01:CDS
CGTGGAATTCTCATTAGAAT+TGG 0.335472 4:+30965664 MsG0480019969.01.T01:CDS
ATCCTTTCCTCTGAGATTGC+AGG 0.348116 4:+30968142 MsG0480019969.01.T01:CDS
ATGTGTCCCGTTTGCCAATA+TGG 0.354615 4:+30969810 MsG0480019969.01.T01:CDS
CCCTCGTGCCGCTGAAACTT+TGG 0.357561 4:+30965296 MsG0480019969.01.T01:CDS
CGTCATTACCATTTATAGTC+TGG 0.362123 4:-30968657 None:intergenic
TTCACTGAGTTCAACTCCTT+GGG 0.362415 4:-30968203 None:intergenic
AGCAAGGGGCTCCAATTGTT+GGG 0.365010 4:-30969930 None:intergenic
GTATCACGGGGACCTTTGTT+AGG 0.366954 4:+30967535 MsG0480019969.01.T01:CDS
CCGTAGTGTTGCCATGTCTA+AGG 0.367124 4:-30968710 None:intergenic
ATGGTCCTCAGTTGAGGAAC+AGG 0.374120 4:+30969829 MsG0480019969.01.T01:CDS
AATGCCCATCCCTGCAGTTC+TGG 0.377868 4:+30970926 MsG0480019969.01.T01:CDS
CTGCATTGTCATTCTCCAAT+TGG 0.380632 4:+30965848 MsG0480019969.01.T01:CDS
AATTGTTGTTTGCAGGTGTA+TGG 0.383895 4:+30966210 MsG0480019969.01.T01:intron
AAGAGTTTCCTGGCTTTCTC+AGG 0.385184 4:-30968745 None:intergenic
AAAGAACTGCGCTTCATCAT+TGG 0.393451 4:-30969975 None:intergenic
TACTTTATCTTGAACAAGAA+TGG 0.394206 4:+30965896 MsG0480019969.01.T01:CDS
TCGAAATTCTCGTTCGAGAA+TGG 0.399827 4:-30964449 None:intergenic
TTTCACTGAGTTCAACTCCT+TGG 0.404118 4:-30968204 None:intergenic
ATCGACCAGATGTTTGTCTA+AGG 0.404157 4:-30964522 None:intergenic
TCTTACTTTACCCCAACAAT+TGG 0.405269 4:+30969919 MsG0480019969.01.T01:CDS
CTCTGTTTAAACGATTCATA+TGG 0.411175 4:-30967627 None:intergenic
TCCTCAACTGAGGACCATAT+TGG 0.411569 4:-30969824 None:intergenic
ATCTTGAACAAGAATGGAAA+TGG 0.412885 4:+30965902 MsG0480019969.01.T01:CDS
GTTGCCTTACTTTAGATATG+AGG 0.418578 4:-30969778 None:intergenic
CGCAGTTCTTTGCAACAGAA+TGG 0.418977 4:+30969987 MsG0480019969.01.T01:CDS
AGAATTTCGACCCAAAGAAA+TGG 0.420137 4:+30964462 MsG0480019969.01.T01:CDS
AAATGAGGAGGAATGGTCTA+TGG 0.423287 4:+30968492 MsG0480019969.01.T01:CDS
AAAACCAATAAAGCAGCTTT+GGG 0.428574 4:+30965729 MsG0480019969.01.T01:CDS
ATAAAAGCTTGGTAACCAAT+TGG 0.432936 4:-30965863 None:intergenic
TATCTATAGGTATGGACAAA+TGG 0.436165 4:+30968111 MsG0480019969.01.T01:intron
GACGATGCGGAGCCATCTTT+AGG 0.437170 4:+30968676 MsG0480019969.01.T01:CDS
TTTATCTGGGGACATGCAAA+AGG 0.440603 4:+30967464 MsG0480019969.01.T01:CDS
TGCAAATGAGAAGAATGAAA+TGG 0.444020 4:+30965786 MsG0480019969.01.T01:CDS
ATTGCAGGAATAGATTTAAG+AGG 0.452326 4:+30968157 MsG0480019969.01.T01:CDS
TTGAAGCTGCTTTCTTATGT+TGG 0.453439 4:-30965471 None:intergenic
AAGAAAGCAGCTTCAAGTCT+TGG 0.458940 4:+30965478 MsG0480019969.01.T01:CDS
TGAAATGTAGCCAGAACTGC+AGG 0.460325 4:-30970936 None:intergenic
ACTGTCTGTGGTGTGGATTA+TGG 0.461261 4:+30968400 MsG0480019969.01.T01:CDS
GATTATGGTGGCGATGGTAC+TGG 0.467879 4:+30968415 MsG0480019969.01.T01:CDS
AGATGAGCTGATTCTTGCCT+TGG 0.468015 4:+30968321 MsG0480019969.01.T01:CDS
AAGAGAAGCGCCGATTTCCT+CGG 0.468347 4:-30964570 None:intergenic
TTGCTGTTGGCAGATCTAGT+TGG 0.468634 4:-30971019 None:intergenic
GAGAGATGCATCAGCTTCAC+TGG 0.470956 4:+30968286 MsG0480019969.01.T01:CDS
CTGCAACTCTTTGCGATGCA+AGG 0.473239 4:-30969718 None:intergenic
GTTTGTCTAAGGACTCTTCT+GGG 0.482766 4:-30964511 None:intergenic
CAGATGGTTTCCGAGGAAAT+CGG 0.483064 4:+30964560 MsG0480019969.01.T01:CDS
GCTGGTCTCTTGAGGTAGAA+AGG 0.484819 4:-30970965 None:intergenic
GCCAATATGGTCCTCAGTTG+AGG 0.484923 4:+30969823 MsG0480019969.01.T01:CDS
ATCTTCGTCTGAGTCTATAT+CGG 0.486975 4:+30964724 MsG0480019969.01.T01:CDS
CTGAAACTTTGGCTAATATG+AGG 0.487440 4:+30965307 MsG0480019969.01.T01:CDS
ATGTCCTCATATCTAAAGTA+AGG 0.487638 4:+30969774 MsG0480019969.01.T01:CDS
CCTGCCGCATCTTACATACA+AGG 0.489634 4:-30971043 None:intergenic
GTCTATATCGGCACTCGCTA+AGG 0.490633 4:+30964736 MsG0480019969.01.T01:CDS
AGACTTTGAATCAAGAGAAC+GGG 0.492618 4:+30965753 MsG0480019969.01.T01:CDS
TCAAACTATCTGCAACTGTA+AGG 0.493932 4:-30968534 None:intergenic
TGAGGACCATATTGGCAAAC+GGG 0.495387 4:-30969816 None:intergenic
GAAACAAAAGCACTGGCTAA+AGG 0.495782 4:+30966349 MsG0480019969.01.T01:CDS
ACTTAATAACAGGATGCTGC+TGG 0.496599 4:+30965222 MsG0480019969.01.T01:intron
CTTCAGAGTTTCTTGTAGAG+TGG 0.500424 4:-30968368 None:intergenic
CTGAGGACCATATTGGCAAA+CGG 0.502267 4:-30969817 None:intergenic
AGTGAGACTATGATGGCTAT+AGG 0.504222 4:+30966277 MsG0480019969.01.T01:CDS
GGAAAGAAAGAGGCGAAAGA+TGG 0.505011 4:+30968436 MsG0480019969.01.T01:CDS
TGCAACAGAATGGATGTTCA+AGG 0.506964 4:+30969997 MsG0480019969.01.T01:CDS
TCTCATATCAACCTTGCCAT+TGG 0.515291 4:+30966313 MsG0480019969.01.T01:CDS
ATTGATTTACACAGTATCAC+GGG 0.515748 4:+30967522 MsG0480019969.01.T01:CDS
AGCTGCGTATGAAACTTTGC+AGG 0.516584 4:+30964784 MsG0480019969.01.T01:CDS
GACAGCAGAACGGAGAGAAA+CGG 0.517489 4:-30964666 None:intergenic
TGCAACTCTTTGCGATGCAA+GGG 0.518334 4:-30969717 None:intergenic
CAGTGAAACCGTTCGTAGGA+TGG 0.520465 4:+30968219 MsG0480019969.01.T01:CDS
TGTAGCCAGAACTGCAGGGA+TGG 0.525034 4:-30970931 None:intergenic
TTACATATACCTGATTCAAA+AGG 0.525119 4:-30968771 None:intergenic
AAAGCAGCTTCAAGTCTTGG+AGG 0.526963 4:+30965481 MsG0480019969.01.T01:CDS
CGATGTAGTCAAGCAGAGGA+TGG 0.533669 4:+30964760 MsG0480019969.01.T01:CDS
CGGAGCCATCTTTAGGTGGA+AGG 0.534822 4:+30968683 MsG0480019969.01.T01:CDS
AGAGTCCTTAGACAAACATC+TGG 0.535239 4:+30964517 MsG0480019969.01.T01:CDS
GTAAATCAATCAAGGCCTCC+AGG 0.538750 4:-30967509 None:intergenic
AGTTGATTTGATCTCAAATG+AGG 0.539019 4:+30968477 MsG0480019969.01.T01:CDS
AGCTTCAAGTCTTGGAGGAT+AGG 0.540705 4:+30965486 MsG0480019969.01.T01:CDS
GTGGATATGCACTGAAGGTA+GGG 0.542703 4:-30969865 None:intergenic
TGTGGATATGCACTGAAGGT+AGG 0.547290 4:-30969866 None:intergenic
GGAGCTGTAATTCGAGGGGT+AGG 0.547299 4:+30968178 MsG0480019969.01.T01:CDS
CAGCTTCACTGGAGGTTCTG+AGG 0.548295 4:+30968297 MsG0480019969.01.T01:CDS
GATACTGTGTAAATCAATCA+AGG 0.548610 4:-30967517 None:intergenic
GGCACGAGGGAGATCACCAC+TGG 0.548938 4:-30965283 None:intergenic
TATATGTAAAAGAGGGGAGA+TGG 0.549978 4:-30971096 None:intergenic
TGCTAGATATTCCCTCAGCA+AGG 0.550282 4:-30969946 None:intergenic
CGATGGTACTGGAAAGAAAG+AGG 0.552285 4:+30968426 MsG0480019969.01.T01:CDS
GAGGAATGGTCTATGGTTCA+AGG 0.552612 4:+30968499 MsG0480019969.01.T01:CDS
AGACATGGCAACACTACGGC+TGG 0.554534 4:+30968714 MsG0480019969.01.T01:CDS
TGATCTCAAATGAGGAGGAA+TGG 0.555217 4:+30968485 MsG0480019969.01.T01:CDS
CAAACACGTAACCTTGCGAT+TGG 0.555627 4:-30965549 None:intergenic
GATTGATTTACACAGTATCA+CGG 0.556354 4:+30967521 MsG0480019969.01.T01:CDS
AGTAGCTCATCATAAAAGCT+TGG 0.557100 4:-30965874 None:intergenic
TTTAGAGATGAAACTTCAGA+TGG 0.557647 4:+30964544 MsG0480019969.01.T01:CDS
TTAAGAGGAGCTGTAATTCG+AGG 0.559155 4:+30968172 MsG0480019969.01.T01:CDS
GAGAGGACTGCAAGTGGTGG+TGG 0.561949 4:+30965808 MsG0480019969.01.T01:CDS
GAATTCTCATTAGAATTGGA+AGG 0.562538 4:+30965668 MsG0480019969.01.T01:CDS
ATGTAAAAGAGGGGAGATGG+TGG 0.563006 4:-30971093 None:intergenic
AAACGGCATCATCACGGAGA+CGG 0.563086 4:-30964649 None:intergenic
GCAGCCCTTCCACCTAAAGA+TGG 0.563737 4:-30968688 None:intergenic
CCTAAAACTCAAGAAGGCGG+AGG 0.566326 4:+30964700 MsG0480019969.01.T01:CDS
GTAGCCAGAACTGCAGGGAT+GGG 0.566717 4:-30970930 None:intergenic
GCGAGGGACACGGAGGAGTG+CGG 0.567964 4:-30964609 None:intergenic
CCTTGTATGTAAGATGCGGC+AGG 0.571103 4:+30971043 MsG0480019969.01.T01:CDS
ATTAAATTTCAGGTTGCAGA+GGG 0.571115 4:+30970789 MsG0480019969.01.T01:intron
CACGAGTGGCGCGAGGGACA+CGG 0.572640 4:-30964619 None:intergenic
TTATCTGGGGACATGCAAAA+GGG 0.573495 4:+30967465 MsG0480019969.01.T01:CDS
TAAGAGGAGCTGTAATTCGA+GGG 0.576253 4:+30968173 MsG0480019969.01.T01:CDS
TTACATACAAGGTTTGCTGT+TGG 0.576284 4:-30971032 None:intergenic
TAAGCTTCAGACAAAGCACC+TGG 0.577205 4:+30967491 MsG0480019969.01.T01:CDS
TGCAATCTCAGAGGAAAGGA+TGG 0.578906 4:-30968140 None:intergenic
CATCCTCCTAAAACTCAAGA+AGG 0.579448 4:+30964694 MsG0480019969.01.T01:CDS
AGGCATTGCTTGTCTGCTGT+CGG 0.582309 4:+30965327 MsG0480019969.01.T01:CDS
CGATGCATTATCCAATCGCA+AGG 0.583344 4:+30965538 MsG0480019969.01.T01:CDS
TTCCTGCAATCTCAGAGGAA+AGG 0.584252 4:-30968144 None:intergenic
GCTAGATATTCCCTCAGCAA+GGG 0.584765 4:-30969945 None:intergenic
TTCTGGAACAGCATCTCCAA+TGG 0.584826 4:-30966329 None:intergenic
CAATTGGAGCCCCTTGCTGA+GGG 0.586273 4:+30969935 MsG0480019969.01.T01:CDS
GTTGCTAAGTGAGACTATGA+TGG 0.587303 4:+30966270 MsG0480019969.01.T01:CDS
TCTGGAATCACAATATTCAA+AGG 0.591013 4:+30965699 MsG0480019969.01.T01:CDS
TAGGTATGGACAAATGGAGC+GGG 0.591994 4:+30968117 MsG0480019969.01.T01:intron
GCCAAAGTTTCAGCGGCACG+AGG 0.593041 4:-30965297 None:intergenic
AGGGACACGGAGGAGTGCGG+CGG 0.593168 4:-30964606 None:intergenic
ATTCGAGGGGTAGGAGCCCA+AGG 0.593303 4:+30968187 MsG0480019969.01.T01:CDS
TTGATGTGCCTGAGAAAGCC+AGG 0.593707 4:+30968737 MsG0480019969.01.T01:CDS
TGTTCCAGAAACAAAAGCAC+TGG 0.594396 4:+30966342 MsG0480019969.01.T01:CDS
ACAATTGGAGCCCCTTGCTG+AGG 0.598915 4:+30969934 MsG0480019969.01.T01:CDS
AAGAAGATACTCACCAACAC+TGG 0.600688 4:-30969900 None:intergenic
TGATTTGATCTCAAATGAGG+AGG 0.601640 4:+30968480 MsG0480019969.01.T01:CDS
AAGACTTTGAATCAAGAGAA+CGG 0.601855 4:+30965752 MsG0480019969.01.T01:CDS
GAAACTTCAGATGGTTTCCG+AGG 0.602468 4:+30964553 MsG0480019969.01.T01:CDS
GTGCTGAATATTCCTAACAA+AGG 0.603084 4:-30967547 None:intergenic
CTTGCGATTGGATAATGCAT+CGG 0.606107 4:-30965537 None:intergenic
TATTAAATTTCAGGTTGCAG+AGG 0.606412 4:+30970788 MsG0480019969.01.T01:intron
CTCACCAACACTGGTCACAT+AGG 0.606851 4:-30969891 None:intergenic
GGAGAGAAACGGCATCATCA+CGG 0.607708 4:-30964655 None:intergenic
AGGAATGGTCTATGGTTCAA+GGG 0.608850 4:+30968500 MsG0480019969.01.T01:CDS
AGTGAAGCTGATGCATCTCT+CGG 0.608979 4:-30968284 None:intergenic
CATATTAGCCAAAGTTTCAG+CGG 0.610356 4:-30965304 None:intergenic
CTAAAACTCAAGAAGGCGGA+GGG 0.610383 4:+30964701 MsG0480019969.01.T01:CDS
AAAACATATATGTAAAAGAG+GGG 0.612012 4:-30971102 None:intergenic
ATTATAAAACTCTTGTGCCG+AGG 0.612072 4:+30966248 MsG0480019969.01.T01:CDS
GGAGCCATCTTTAGGTGGAA+GGG 0.616417 4:+30968684 MsG0480019969.01.T01:CDS
CACAAGTTCATTGACAGTGT+CGG 0.617677 4:-30969747 None:intergenic
GATGCGGAGCCATCTTTAGG+TGG 0.618194 4:+30968679 MsG0480019969.01.T01:CDS
ATGAGAAGAATGAAATGGAG+AGG 0.618583 4:+30965791 MsG0480019969.01.T01:CDS
ACTAAGAACTGTCTGTGGTG+TGG 0.622262 4:+30968393 MsG0480019969.01.T01:CDS
CATATGAATCGTTTAAACAG+AGG 0.624632 4:+30967628 MsG0480019969.01.T01:CDS
CTAGATATTCCCTCAGCAAG+GGG 0.625075 4:-30969944 None:intergenic
GAACAGCATCTCCAATGGCA+AGG 0.625431 4:-30966324 None:intergenic
TGGAAGGGCTGCCTTAGACA+TGG 0.625514 4:+30968699 MsG0480019969.01.T01:CDS
TCAATTAAGTTCGACAGTGG+AGG 0.629285 4:+30965251 MsG0480019969.01.T01:CDS
ATGACATCACGAGTGGCGCG+AGG 0.634491 4:-30964626 None:intergenic
GGATGGCGGAGACAGCAGAA+CGG 0.635662 4:-30964676 None:intergenic
TTGGAGAATGACAATGCAGG+TGG 0.635971 4:-30965844 None:intergenic
GCAAGGGGCTCCAATTGTTG+GGG 0.636099 4:-30969929 None:intergenic
GGACTGTGGATATGCACTGA+AGG 0.637086 4:-30969870 None:intergenic
GGTGTGGATTATGGTGGCGA+TGG 0.637761 4:+30968409 MsG0480019969.01.T01:CDS
ATAGTCTCACTTAGCAACCT+CGG 0.638024 4:-30966265 None:intergenic
TTTACATAGAACAGTTGCGT+GGG 0.638502 4:+30970823 MsG0480019969.01.T01:CDS
AAGATGGAAGCCAAAATGCA+CGG 0.638659 4:+30968452 MsG0480019969.01.T01:CDS
GGAGGATAGGCTAGACACAA+TGG 0.638862 4:+30965499 MsG0480019969.01.T01:CDS
ATCTATTCCTGCAATCTCAG+AGG 0.641598 4:-30968149 None:intergenic
GACGCGGCTCAAGATTTGCG+TGG 0.641928 4:+30965646 MsG0480019969.01.T01:CDS
AACTCAATTAAGTTCGACAG+TGG 0.643690 4:+30965248 MsG0480019969.01.T01:CDS
TGAAACCGTTCGTAGGATGG+AGG 0.643932 4:+30968222 MsG0480019969.01.T01:CDS
GCAACTCTTTGCGATGCAAG+GGG 0.644348 4:-30969716 None:intergenic
CAGTCCTATGTGACCAGTGT+TGG 0.645109 4:+30969887 MsG0480019969.01.T01:CDS
CCTTAGACATGGCAACACTA+CGG 0.646331 4:+30968710 MsG0480019969.01.T01:CDS
TTGCTTGTCTGCTGTCGGAG+AGG 0.650932 4:+30965332 MsG0480019969.01.T01:CDS
TGACATCACGAGTGGCGCGA+GGG 0.655354 4:-30964625 None:intergenic
AAGAGGAGCTGTAATTCGAG+GGG 0.656722 4:+30968174 MsG0480019969.01.T01:CDS
AGACTCCTCCATCCTACGAA+CGG 0.659136 4:-30968227 None:intergenic
CCAAAGTTTCAGCGGCACGA+GGG 0.659276 4:-30965296 None:intergenic
AGCACCCTGTTCCTCAACTG+AGG 0.662146 4:-30969834 None:intergenic
AGGTCGATGTAGTCAAGCAG+AGG 0.662812 4:+30964756 MsG0480019969.01.T01:CDS
CCTCCTAAAACTCAAGAAGG+CGG 0.663777 4:+30964697 MsG0480019969.01.T01:CDS
GTGGAGGATGTATTCGCCAG+TGG 0.667265 4:+30965267 MsG0480019969.01.T01:CDS
TGGTCCTCAGTTGAGGAACA+GGG 0.667446 4:+30969830 MsG0480019969.01.T01:CDS
GGAATGGTCTATGGTTCAAG+GGG 0.672706 4:+30968501 MsG0480019969.01.T01:CDS
GATTCTGACAAAGATGATGG+TGG 0.676393 4:+30964418 None:intergenic
CAATTGGAGAATGACAATGC+AGG 0.677284 4:-30965847 None:intergenic
CAAACCTTGTATGTAAGATG+CGG 0.682010 4:+30971039 MsG0480019969.01.T01:CDS
AGATGCATCAGCTTCACTGG+AGG 0.682346 4:+30968289 MsG0480019969.01.T01:CDS
ATAGGTATGGACAAATGGAG+CGG 0.686028 4:+30968116 MsG0480019969.01.T01:intron
AGGGGAAGTGCATGAAAACG+AGG 0.687558 4:-30969698 None:intergenic
AGGGATGGGCATTGACAGAG+CGG 0.687570 4:-30970916 None:intergenic
ATTCAGTACATCACAGATCG+CGG 0.690056 4:+30970846 MsG0480019969.01.T01:CDS
GTCTGTGGTGTGGATTATGG+TGG 0.693206 4:+30968403 MsG0480019969.01.T01:CDS
CTTTACATAGAACAGTTGCG+TGG 0.694010 4:+30970822 MsG0480019969.01.T01:CDS
AACTCAGTGAAACCGTTCGT+AGG 0.698737 4:+30968215 MsG0480019969.01.T01:CDS
ATGGAGAGGACTGCAAGTGG+TGG 0.701831 4:+30965805 MsG0480019969.01.T01:CDS
GAAATGGAGAGGACTGCAAG+TGG 0.702757 4:+30965802 MsG0480019969.01.T01:CDS
TATAAATGGTAATGACGATG+CGG 0.703170 4:+30968663 MsG0480019969.01.T01:CDS
GAGACGGATGACATCACGAG+TGG 0.704036 4:-30964633 None:intergenic
GATAATGCATCGGTAAGACG+AGG 0.707085 4:-30965527 None:intergenic
GCTTCAGACAAAGCACCTGG+AGG 0.709595 4:+30967494 MsG0480019969.01.T01:CDS
AAGTCACTAAGAACTGTCTG+TGG 0.711291 4:+30968388 MsG0480019969.01.T01:CDS
TGTTGTTGTTTAGGTTGACG+CGG 0.711881 4:+30965630 MsG0480019969.01.T01:intron
ACACTGGTCACATAGGACTG+TGG 0.725362 4:-30969884 None:intergenic
TTGATTTACACAGTATCACG+GGG 0.739668 4:+30967523 MsG0480019969.01.T01:CDS
GAGTGGCGCGAGGGACACGG+AGG 0.748408 4:-30964616 None:intergenic
GAAATGTAGCCAGAACTGCA+GGG 0.781008 4:-30970935 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATGTAAAATAAATA+GGG + Chr4:30969093-30969112 MsG0480019969.01.T01:intron 10.0%
!!! AAAATATCAATTGATTTATA+GGG - Chr4:30967412-30967431 None:intergenic 10.0%
!!! TAAAATATCAATTGATTTAT+AGG - Chr4:30967413-30967432 None:intergenic 10.0%
!! AAAAACATATATGTAAAAGA+GGG - Chr4:30971106-30971125 None:intergenic 15.0%
!! AAAAGATGTAAAATAAATAG+GGG + Chr4:30969094-30969113 MsG0480019969.01.T01:intron 15.0%
!! AAAATATATTTAAGTAATGC+CGG - Chr4:30969652-30969671 None:intergenic 15.0%
!! GAAAAAGATGTAAAATAAAT+AGG + Chr4:30969092-30969111 MsG0480019969.01.T01:intron 15.0%
!! TAAAAACATATATGTAAAAG+AGG - Chr4:30971107-30971126 None:intergenic 15.0%
!! TATTATAAATTAAACTCAGA+AGG - Chr4:30967289-30967308 None:intergenic 15.0%
!!! AAAATGATATTGACTAAATT+TGG + Chr4:30966158-30966177 MsG0480019969.01.T01:intron 15.0%
!!! AAAGTGTTTGATAAAATTAA+CGG + Chr4:30966860-30966879 MsG0480019969.01.T01:intron 15.0%
!!! ATTACTTTAAAAATTCAATG+TGG - Chr4:30966456-30966475 None:intergenic 15.0%
!!! TAAATATTTTTTACAAAGAG+AGG - Chr4:30970449-30970468 None:intergenic 15.0%
!!! TAATAAACATCATATTTTCA+AGG - Chr4:30968890-30968909 None:intergenic 15.0%
!!! TTTTGTTTTACTATCTTTTT+GGG + Chr4:30968086-30968105 MsG0480019969.01.T01:intron 15.0%
!! AAAACATATATGTAAAAGAG+GGG - Chr4:30971105-30971124 None:intergenic 20.0%
!! AAATGGTAACTAAAAATGAA+TGG - Chr4:30970335-30970354 None:intergenic 20.0%
!! ATCAACAATAAATACTATGA+GGG - Chr4:30969068-30969087 None:intergenic 20.0%
!! ATGATAAGATAACCATAAAT+TGG - Chr4:30966685-30966704 None:intergenic 20.0%
!! GAAGAATAAAATAAGAGAAA+TGG + Chr4:30967811-30967830 MsG0480019969.01.T01:intron 20.0%
!! TTAATCAATCATTTGTTCAA+CGG - Chr4:30965961-30965980 None:intergenic 20.0%
!! TTTGAAAATGACAAGTAAAT+AGG + Chr4:30970508-30970527 MsG0480019969.01.T01:intron 20.0%
!!! ACATATATGTTTTTATCTTG+CGG + Chr4:30971112-30971131 MsG0480019969.01.T01:three_prime_UTR 20.0%
!!! AGTGGATTATTCTTAATATT+TGG + Chr4:30968853-30968872 MsG0480019969.01.T01:intron 20.0%
!!! ATAAATGACATTCATTGTTT+TGG - Chr4:30969522-30969541 None:intergenic 20.0%
!!! ATAAGTTTTGTTACTATTGA+TGG + Chr4:30970371-30970390 MsG0480019969.01.T01:intron 20.0%
!!! ATTTTTATAAAAGTGACAAG+AGG + Chr4:30970538-30970557 MsG0480019969.01.T01:intron 20.0%
!!! CTTTTGTTTTACTATCTTTT+TGG + Chr4:30968085-30968104 MsG0480019969.01.T01:intron 20.0%
!!! GATAATAAATAGTTGATTCT+AGG - Chr4:30970412-30970431 None:intergenic 20.0%
!!! GTTTATCAGATATTTTATCT+GGG + Chr4:30967451-30967470 MsG0480019969.01.T01:CDS 20.0%
!!! GTTTTTTATCCATCAAAAAA+TGG + Chr4:30966046-30966065 MsG0480019969.01.T01:intron 20.0%
!!! GTTTTTTGTTTTTTGTTTTC+CGG + Chr4:30969630-30969649 MsG0480019969.01.T01:intron 20.0%
!!! TCATTTTTAGTTACCATTTT+AGG + Chr4:30970336-30970355 MsG0480019969.01.T01:intron 20.0%
!!! TTAGTTTTTTCAACCTAAAA+TGG - Chr4:30970352-30970371 None:intergenic 20.0%
!!! TTCTGATGTACAAATTTTAA+TGG + Chr4:30967581-30967600 MsG0480019969.01.T01:CDS 20.0%
!!! TTTATCAGATATTTTATCTG+GGG + Chr4:30967452-30967471 MsG0480019969.01.T01:CDS 20.0%
!!! TTTTGTATTTTGAGTGTTAA+TGG + Chr4:30964945-30964964 MsG0480019969.01.T01:intron 20.0%
! AACAAAATGATAAACCTACT+AGG - Chr4:30966620-30966639 None:intergenic 25.0%
! AATCAGGTATATGTAACATT+AGG + Chr4:30968778-30968797 MsG0480019969.01.T01:intron 25.0%
! AATGGAAATGGTACAATTAT+TGG + Chr4:30965914-30965933 MsG0480019969.01.T01:intron 25.0%
! AGAATTTGGTACAAATTTGA+TGG - Chr4:30964850-30964869 None:intergenic 25.0%
! ATCTTATCATTTCAGTTTCT+TGG + Chr4:30966695-30966714 MsG0480019969.01.T01:intron 25.0%
! CTTATATATAAAACCCACTT+GGG + Chr4:30967897-30967916 MsG0480019969.01.T01:intron 25.0%
! GATCAACAATAAATACTATG+AGG - Chr4:30969069-30969088 None:intergenic 25.0%
! GCTCTATTAATAACTCAAAA+TGG - Chr4:30965110-30965129 None:intergenic 25.0%
! GGACAATCAAAATATAGTAT+CGG - Chr4:30965991-30966010 None:intergenic 25.0%
! TAAATACATAGAACATGCAA+AGG - Chr4:30965437-30965456 None:intergenic 25.0%
! TAATTGATAAGCTAGCATAT+TGG + Chr4:30966833-30966852 MsG0480019969.01.T01:intron 25.0%
! TACTTAGACCATGAATTTAT+CGG + Chr4:30970634-30970653 MsG0480019969.01.T01:intron 25.0%
! TACTTTATCTTGAACAAGAA+TGG + Chr4:30965896-30965915 MsG0480019969.01.T01:CDS 25.0%
! TCAACAATAAATACTATGAG+GGG - Chr4:30969067-30969086 None:intergenic 25.0%
! TCTTATATATAAAACCCACT+TGG + Chr4:30967896-30967915 MsG0480019969.01.T01:intron 25.0%
! TTACATATACCTGATTCAAA+AGG - Chr4:30968774-30968793 None:intergenic 25.0%
! TTGACTAAATTTGGATATTC+AGG + Chr4:30966167-30966186 MsG0480019969.01.T01:intron 25.0%
! TTGAGTTATTAATAGAGTCA+GGG - Chr4:30964882-30964901 None:intergenic 25.0%
! TTTCTTAATTCCTGTGATTT+AGG - Chr4:30968963-30968982 None:intergenic 25.0%
! TTTGCATGTTCTATGTATTT+AGG + Chr4:30965436-30965455 MsG0480019969.01.T01:intron 25.0%
! TTTGTACCAAATTCTCAAAT+TGG - Chr4:30965139-30965158 None:intergenic 25.0%
!! AGTTTTCCAGTTCAAATTTT+CGG + Chr4:30967204-30967223 MsG0480019969.01.T01:intron 25.0%
!! ATATTTTCCATAACCAAAAG+GGG - Chr4:30965369-30965388 None:intergenic 25.0%
!! ATGGAAAATATCGAGTTTTT+CGG + Chr4:30965378-30965397 MsG0480019969.01.T01:intron 25.0%
!! ATGGACTAAATTCAAATCAT+AGG - Chr4:30965592-30965611 None:intergenic 25.0%
!! ATGTTTCTACGAATTAGAAA+AGG - Chr4:30968065-30968084 None:intergenic 25.0%
!! GATATTTTCCATAACCAAAA+GGG - Chr4:30965370-30965389 None:intergenic 25.0%
!! GATCTTATTTGGTATGTTAA+TGG + Chr4:30965020-30965039 MsG0480019969.01.T01:intron 25.0%
!! GGTTTATCAGATATTTTATC+TGG + Chr4:30967450-30967469 MsG0480019969.01.T01:intron 25.0%
!! GTTAATGGTTCAATATCTTT+TGG + Chr4:30964960-30964979 MsG0480019969.01.T01:intron 25.0%
!! GTTTAAGAGCATAAAGAAAT+GGG + Chr4:30969370-30969389 MsG0480019969.01.T01:intron 25.0%
!! TGCTGATTGTATTAAATTTC+AGG + Chr4:30970779-30970798 MsG0480019969.01.T01:intron 25.0%
!! TGTTTAAGAGCATAAAGAAA+TGG + Chr4:30969369-30969388 MsG0480019969.01.T01:intron 25.0%
!! TGTTTCTACGAATTAGAAAA+GGG - Chr4:30968064-30968083 None:intergenic 25.0%
!! TTGTTTTCTTCTGTATTGTT+CGG + Chr4:30966635-30966654 MsG0480019969.01.T01:intron 25.0%
!! TTTAAGAGCATAAAGAAATG+GGG + Chr4:30969371-30969390 MsG0480019969.01.T01:intron 25.0%
!! TTTGAGTTATTAATAGAGTC+AGG - Chr4:30964883-30964902 None:intergenic 25.0%
!! TTTGTACCAAATTCTCATTT+TGG + Chr4:30964855-30964874 MsG0480019969.01.T01:intron 25.0%
!! TTTTAACATTATGTCATCCA+AGG - Chr4:30968341-30968360 None:intergenic 25.0%
!!! AACTGATTTGAAATGATTCT+TGG - Chr4:30967188-30967207 None:intergenic 25.0%
!!! AATATTCAGCACTTATTTTC+TGG + Chr4:30967558-30967577 MsG0480019969.01.T01:CDS 25.0%
!!! ACAAGAGTTTTATAATCTTC+AGG - Chr4:30966244-30966263 None:intergenic 25.0%
!!! ACTGATTTGAAATGATTCTT+GGG - Chr4:30967187-30967206 None:intergenic 25.0%
!!! ACTTTATCTTTTTCAGCATT+TGG + Chr4:30968616-30968635 MsG0480019969.01.T01:CDS 25.0%
!!! AGCAGAAATTAAGTTGATAT+TGG - Chr4:30970159-30970178 None:intergenic 25.0%
!!! AGCTTATTTTTTTTAGTAGG+TGG - Chr4:30966133-30966152 None:intergenic 25.0%
!!! ATCTTTTTGGGAATATCTAT+AGG + Chr4:30968098-30968117 MsG0480019969.01.T01:intron 25.0%
!!! CAGTCTCATTTTTATTTCTT+CGG + Chr4:30968808-30968827 MsG0480019969.01.T01:intron 25.0%
!!! GCAGAAATTAAGTTGATATT+GGG - Chr4:30970158-30970177 None:intergenic 25.0%
!!! GCTAGCTTATTTTTTTTAGT+AGG - Chr4:30966136-30966155 None:intergenic 25.0%
!!! GTTTTGGTTGAAAAAAATGA+TGG - Chr4:30969506-30969525 None:intergenic 25.0%
!!! TTTTGAGTTATTAATAGAGC+CGG + Chr4:30965110-30965129 MsG0480019969.01.T01:intron 25.0%
AAAACCAATAAAGCAGCTTT+GGG + Chr4:30965729-30965748 MsG0480019969.01.T01:CDS 30.0%
AAAGATTTGGGAGGAAAATT+GGG + Chr4:30966558-30966577 MsG0480019969.01.T01:intron 30.0%
AAGACTTTGAATCAAGAGAA+CGG + Chr4:30965752-30965771 MsG0480019969.01.T01:CDS 30.0%
AATATTGTGGAAAAATGGAC+GGG + Chr4:30967735-30967754 MsG0480019969.01.T01:intron 30.0%
AATGATAAACCTACTAGGAA+AGG - Chr4:30966615-30966634 None:intergenic 30.0%
ACTTAGACCATGAATTTATC+GGG + Chr4:30970635-30970654 MsG0480019969.01.T01:intron 30.0%
AGAAATGTTTGACAAAGACA+GGG + Chr4:30965083-30965102 MsG0480019969.01.T01:intron 30.0%
ATCACAGGAATTAAGAAAGT+AGG + Chr4:30968965-30968984 MsG0480019969.01.T01:intron 30.0%
ATCAGAGGGAGTAATTTATT+GGG + Chr4:30970561-30970580 MsG0480019969.01.T01:intron 30.0%
ATCTTGAACAAGAATGGAAA+TGG + Chr4:30965902-30965921 MsG0480019969.01.T01:CDS 30.0%
ATTAAACTCAGAAGGTCAAT+TGG - Chr4:30967281-30967300 None:intergenic 30.0%
ATTGCAGGAATAGATTTAAG+AGG + Chr4:30968157-30968176 MsG0480019969.01.T01:CDS 30.0%
CAAAACAACTAATAGAGTCA+TGG - Chr4:30965071-30965052 None:intergenic 30.0%
CAATATTGTGGAAAAATGGA+CGG + Chr4:30967734-30967753 MsG0480019969.01.T01:intron 30.0%
CATACCAAATAAGATCCAAA+AGG - Chr4:30965016-30965035 None:intergenic 30.0%
CATATGAATCGTTTAAACAG+AGG + Chr4:30967628-30967647 MsG0480019969.01.T01:CDS 30.0%
CGGTTTAGAAATTGATAGAA+GGG + Chr4:30968828-30968847 MsG0480019969.01.T01:intron 30.0%
CTCTGTTTAAACGATTCATA+TGG - Chr4:30967630-30967649 None:intergenic 30.0%
GAATTCTCATTAGAATTGGA+AGG + Chr4:30965668-30965687 MsG0480019969.01.T01:CDS 30.0%
GATACTGTGTAAATCAATCA+AGG - Chr4:30967520-30967539 None:intergenic 30.0%
GATGAAAACCAGACTATAAA+TGG + Chr4:30968649-30968668 MsG0480019969.01.T01:CDS 30.0%
GCAGAAAGAAAAGAAATTCA+AGG - Chr4:30970719-30970738 None:intergenic 30.0%
TAAAACCAATAAAGCAGCTT+TGG + Chr4:30965728-30965747 MsG0480019969.01.T01:CDS 30.0%
TAGTTACCGAAAATTTGAAC+TGG - Chr4:30967213-30967232 None:intergenic 30.0%
TATCTATAGGTATGGACAAA+TGG + Chr4:30968111-30968130 MsG0480019969.01.T01:intron 30.0%
TCAAATAAGCAAGACTTCTA+TGG + Chr4:30969236-30969255 MsG0480019969.01.T01:intron 30.0%
TCGGTTTAGAAATTGATAGA+AGG + Chr4:30968827-30968846 MsG0480019969.01.T01:intron 30.0%
TGCAAATGAGAAGAATGAAA+TGG + Chr4:30965786-30965805 MsG0480019969.01.T01:CDS 30.0%
TTCGAGAAAGATTGTTAGTT+AGG + Chr4:30970033-30970052 MsG0480019969.01.T01:intron 30.0%
TTGAGAATTTGGTACAAAAC+AGG + Chr4:30965141-30965160 MsG0480019969.01.T01:intron 30.0%
TTGTCAAACATTTCTCAGAT+TGG - Chr4:30965078-30965097 None:intergenic 30.0%
TTTACAAAGAGAGGAATAGA+TGG - Chr4:30970440-30970459 None:intergenic 30.0%
TTTAGAGATGAAACTTCAGA+TGG + Chr4:30964544-30964563 MsG0480019969.01.T01:CDS 30.0%
TTTGGGAATATCTATAGGTA+TGG + Chr4:30968103-30968122 MsG0480019969.01.T01:intron 30.0%
! AATGCCTTTTGGATCTTATT+TGG + Chr4:30965009-30965028 MsG0480019969.01.T01:intron 30.0%
! AGCATCCTGTTATTAAGTTT+TGG - Chr4:30965220-30965239 None:intergenic 30.0%
! ATAAAAGCTTGGTAACCAAT+TGG - Chr4:30965866-30965885 None:intergenic 30.0%
! ATGATCCTTGTTTCTCATAT+TGG + Chr4:30964903-30964922 MsG0480019969.01.T01:intron 30.0%
! ATGTCCTCATATCTAAAGTA+AGG + Chr4:30969774-30969793 MsG0480019969.01.T01:CDS 30.0%
! ATGTGTCTGAGATCAATATT+TGG + Chr4:30970188-30970207 MsG0480019969.01.T01:intron 30.0%
! ATTGATTTACACAGTATCAC+GGG + Chr4:30967522-30967541 MsG0480019969.01.T01:CDS 30.0%
! CAATCAAAATATAGTATCGG+TGG - Chr4:30965988-30966007 None:intergenic 30.0%
! CGATATTTTCCATAACCAAA+AGG - Chr4:30965371-30965390 None:intergenic 30.0%
! GAATGGATGTATTCAACTTT+TGG - Chr4:30970318-30970337 None:intergenic 30.0%
! GACAAGAAAATTTCTGAAGA+GGG + Chr4:30969175-30969194 MsG0480019969.01.T01:intron 30.0%
! GATTGATTTACACAGTATCA+CGG + Chr4:30967521-30967540 MsG0480019969.01.T01:CDS 30.0%
! GTTAATGACATAATGCCTTT+TGG + Chr4:30964998-30965017 MsG0480019969.01.T01:intron 30.0%
! TATAAATGGTAATGACGATG+CGG + Chr4:30968663-30968682 MsG0480019969.01.T01:CDS 30.0%
! TCTGGAATCACAATATTCAA+AGG + Chr4:30965699-30965718 MsG0480019969.01.T01:CDS 30.0%
! TTCTTTTCTTTCTGCACATA+TGG + Chr4:30970724-30970743 MsG0480019969.01.T01:intron 30.0%
! TTTAGCTCATGAATCTTTGT+AGG + Chr4:30967429-30967448 MsG0480019969.01.T01:intron 30.0%
! TTTGAGTTATTAATAGAGCC+GGG + Chr4:30965111-30965130 MsG0480019969.01.T01:intron 30.0%
!! AATTTTTCCCCTTTTGGTTA+TGG + Chr4:30965359-30965378 MsG0480019969.01.T01:intron 30.0%
!! ACATTTGAATTGTTGTTTGC+AGG + Chr4:30966203-30966222 MsG0480019969.01.T01:intron 30.0%
!! AGAGAGTTCTTGCTATATTT+TGG + Chr4:30966511-30966530 MsG0480019969.01.T01:intron 30.0%
!! AGTTGATTTGATCTCAAATG+AGG + Chr4:30968477-30968496 MsG0480019969.01.T01:CDS 30.0%
!! ATCTTTTGGATGTTACTTAG+TGG + Chr4:30964974-30964993 MsG0480019969.01.T01:intron 30.0%
!! ATTAAATTTCAGGTTGCAGA+GGG + Chr4:30970789-30970808 MsG0480019969.01.T01:intron 30.0%
!! TATTAAATTTCAGGTTGCAG+AGG + Chr4:30970788-30970807 MsG0480019969.01.T01:intron 30.0%
!! TCCATTTTTCCACAATATTG+AGG - Chr4:30967734-30967753 None:intergenic 30.0%
!! TCTTTTGGATGTTACTTAGT+GGG + Chr4:30964975-30964994 MsG0480019969.01.T01:intron 30.0%
!! TGTTGTTGTTGTTGTTGTTT+AGG + Chr4:30965621-30965640 MsG0480019969.01.T01:intron 30.0%
!!! ATGTTTTTTCACCAGCTTAT+AGG - Chr4:30967040-30967059 None:intergenic 30.0%
!!! TGTTTTTTCACCAGCTTATA+GGG - Chr4:30967039-30967058 None:intergenic 30.0%
AACAAAAGGAGGCAGATTAA+AGG - Chr4:30969284-30969303 None:intergenic 35.0%
AACAACAACATCTCAGACAA+TGG - Chr4:30965611-30965630 None:intergenic 35.0%
AACTCAATTAAGTTCGACAG+TGG + Chr4:30965248-30965267 MsG0480019969.01.T01:CDS 35.0%
AAGCATGCAGATTAAATTGC+AGG - Chr4:30970112-30970131 None:intergenic 35.0%
AATCATAGGATGTAAGTCCA+TGG - Chr4:30965578-30965597 None:intergenic 35.0%
AATGGAGGTAGGAAAGATTT+GGG + Chr4:30966546-30966565 MsG0480019969.01.T01:intron 35.0%
AATTCCTGTGATTTAGGCAA+GGG - Chr4:30968957-30968976 None:intergenic 35.0%
AATTGGAAGGTTTAAGTCTC+TGG + Chr4:30965681-30965700 MsG0480019969.01.T01:CDS 35.0%
ACAAAAGGAGGCAGATTAAA+GGG - Chr4:30969283-30969302 None:intergenic 35.0%
ACAGGAATTAAGAAAGTAGG+TGG + Chr4:30968968-30968987 MsG0480019969.01.T01:intron 35.0%
AGAATTTCGACCCAAAGAAA+TGG + Chr4:30964462-30964481 MsG0480019969.01.T01:CDS 35.0%
AGACTTTGAATCAAGAGAAC+GGG + Chr4:30965753-30965772 MsG0480019969.01.T01:CDS 35.0%
AGGATCTCTTCTCCAATTTA+TGG + Chr4:30966670-30966689 MsG0480019969.01.T01:intron 35.0%
AGGTCAATTGGAGAGAAAAA+AGG - Chr4:30967269-30967288 None:intergenic 35.0%
AGTAGCTCATCATAAAAGCT+TGG - Chr4:30965877-30965896 None:intergenic 35.0%
AGTTATCCACTATAAGCTAG+TGG + Chr4:30967124-30967143 MsG0480019969.01.T01:intron 35.0%
ATATTGAGGCCATATGTCAA+AGG - Chr4:30967720-30967739 None:intergenic 35.0%
ATCTTCGTCTGAGTCTATAT+CGG + Chr4:30964724-30964743 MsG0480019969.01.T01:CDS 35.0%
ATGAGAAGAATGAAATGGAG+AGG + Chr4:30965791-30965810 MsG0480019969.01.T01:CDS 35.0%
ATGGACCAATATGAGAAACA+AGG - Chr4:30964911-30964930 None:intergenic 35.0%
ATTATAAAACTCTTGTGCCG+AGG + Chr4:30966248-30966267 MsG0480019969.01.T01:CDS 35.0%
CAAACCTTGTATGTAAGATG+CGG + Chr4:30971039-30971058 MsG0480019969.01.T01:CDS 35.0%
CAGCATAATGTGGTTAACAA+TGG - Chr4:30967384-30967403 None:intergenic 35.0%
CATATTAGCCAAAGTTTCAG+CGG - Chr4:30965307-30965326 None:intergenic 35.0%
CCTCAAAAGTTAAGAAGACA+GGG + Chr4:30970276-30970295 MsG0480019969.01.T01:intron 35.0%
CGTCATTACCATTTATAGTC+TGG - Chr4:30968660-30968679 None:intergenic 35.0%
CGTGGAATTCTCATTAGAAT+TGG + Chr4:30965664-30965683 MsG0480019969.01.T01:CDS 35.0%
CTAAATTAGCCCACCTAAAT+TGG - Chr4:30967997-30968016 None:intergenic 35.0%
CTCTGTTTGGTAAAAAGTTG+TGG + Chr4:30966756-30966775 MsG0480019969.01.T01:intron 35.0%
CTGAAACTTTGGCTAATATG+AGG + Chr4:30965307-30965326 MsG0480019969.01.T01:CDS 35.0%
CTTAGACCATGAATTTATCG+GGG + Chr4:30970636-30970655 MsG0480019969.01.T01:intron 35.0%
GAAAGATTTGGGAGGAAAAT+TGG + Chr4:30966557-30966576 MsG0480019969.01.T01:intron 35.0%
GAAATTGATAGAAGGGATAG+TGG + Chr4:30968835-30968854 MsG0480019969.01.T01:intron 35.0%
GAGAAATGTTTGACAAAGAC+AGG + Chr4:30965082-30965101 MsG0480019969.01.T01:intron 35.0%
GAGAAGAGATCCTTTCAAAA+TGG - Chr4:30966663-30966682 None:intergenic 35.0%
GATCAGAGGGAGTAATTTAT+TGG + Chr4:30970560-30970579 MsG0480019969.01.T01:intron 35.0%
GCAAGGGGTTACTATATTTA+TGG - Chr4:30968941-30968960 None:intergenic 35.0%
GCCTCAATATTGTGGAAAAA+TGG + Chr4:30967730-30967749 MsG0480019969.01.T01:intron 35.0%
GGGGTTACTATATTTATGGA+CGG - Chr4:30968937-30968956 None:intergenic 35.0%
GGTCAATTGGAGAGAAAAAA+GGG - Chr4:30967268-30967287 None:intergenic 35.0%
GTACAAAACAGGAACCAATT+TGG + Chr4:30965152-30965171 MsG0480019969.01.T01:intron 35.0%
GTGATTCTGTACTCAAAACT+TGG + Chr4:30966081-30966100 MsG0480019969.01.T01:intron 35.0%
GTGCTGAATATTCCTAACAA+AGG - Chr4:30967550-30967569 None:intergenic 35.0%
GTGTTAGAAGAACCAATGAA+TGG - Chr4:30967237-30967256 None:intergenic 35.0%
GTTACTATATTTATGGACGG+AGG - Chr4:30968934-30968953 None:intergenic 35.0%
GTTGCCTTACTTTAGATATG+AGG - Chr4:30969781-30969800 None:intergenic 35.0%
GTTTGGTAAAAAGTTGTGGA+TGG + Chr4:30966760-30966779 MsG0480019969.01.T01:intron 35.0%
TAATTCCTGTGATTTAGGCA+AGG - Chr4:30968958-30968977 None:intergenic 35.0%
TATATAAAACCCACTTGGGT+TGG + Chr4:30967901-30967920 MsG0480019969.01.T01:intron 35.0%
TATATGTAAAAGAGGGGAGA+TGG - Chr4:30971099-30971118 None:intergenic 35.0%
TATCGAGTAAACCACCAAAT+TGG - Chr4:30965169-30965188 None:intergenic 35.0%
TATTGAGGCCATATGTCAAA+GGG - Chr4:30967719-30967738 None:intergenic 35.0%
TCAAACTATCTGCAACTGTA+AGG - Chr4:30968537-30968556 None:intergenic 35.0%
TCAGAGGGAGTAATTTATTG+GGG + Chr4:30970562-30970581 MsG0480019969.01.T01:intron 35.0%
TCCTCAAAAGTTAAGAAGAC+AGG + Chr4:30970275-30970294 MsG0480019969.01.T01:intron 35.0%
TCTCAATAAACCCTATAAGC+TGG + Chr4:30967026-30967045 MsG0480019969.01.T01:intron 35.0%
TCTTACTTTACCCCAACAAT+TGG + Chr4:30969919-30969938 MsG0480019969.01.T01:CDS 35.0%
TGATTTGATCTCAAATGAGG+AGG + Chr4:30968480-30968499 MsG0480019969.01.T01:CDS 35.0%
TGTGGCCAAAACTTAATAAC+AGG + Chr4:30965212-30965231 MsG0480019969.01.T01:intron 35.0%
TGTTCATTCCCTTTGACATA+TGG + Chr4:30967708-30967727 MsG0480019969.01.T01:intron 35.0%
TTCGGTAACTATCCATTCAT+TGG + Chr4:30967222-30967241 MsG0480019969.01.T01:intron 35.0%
TTGAGTTATTAATAGAGCCG+GGG + Chr4:30965112-30965131 MsG0480019969.01.T01:intron 35.0%
TTGATTTACACAGTATCACG+GGG + Chr4:30967523-30967542 MsG0480019969.01.T01:CDS 35.0%
TTTACATAGAACAGTTGCGT+GGG + Chr4:30970823-30970842 MsG0480019969.01.T01:CDS 35.0%
! ATTTTATCGTTGAGTGACCT+AGG + Chr4:30966733-30966752 MsG0480019969.01.T01:intron 35.0%
! ATTTTCTTTCATCGAGTGCT+TGG + Chr4:30969404-30969423 MsG0480019969.01.T01:intron 35.0%
! CGACAAGAAAATTTCTGAAG+AGG + Chr4:30969174-30969193 MsG0480019969.01.T01:intron 35.0%
! CGGAGAACATTCTTTTACAT+CGG + Chr4:30971132-30971151 MsG0480019969.01.T01:three_prime_UTR 35.0%
! CGTTGAGATTTTCTGTAATG+TGG + Chr4:30965194-30965213 MsG0480019969.01.T01:intron 35.0%
! GGTACTAATTTTTCCCCTTT+TGG + Chr4:30965353-30965372 MsG0480019969.01.T01:intron 35.0%
! TCTTCAGTAGATCTTTTAGC+TGG - Chr4:30970986-30971005 None:intergenic 35.0%
! TTGAAGCTGCTTTCTTATGT+TGG - Chr4:30965474-30965493 None:intergenic 35.0%
! TTGTTCGGTACCATTTTGAA+AGG + Chr4:30966650-30966669 MsG0480019969.01.T01:intron 35.0%
!! AATCTAGTTCTCTCTCTTGA+AGG - Chr4:30969039-30969058 None:intergenic 35.0%
!! AATTGTTGTTTGCAGGTGTA+TGG + Chr4:30966210-30966229 MsG0480019969.01.T01:intron 35.0%
!! CATTGCTTTCTAAGACGAAA+AGG + Chr4:30969551-30969570 MsG0480019969.01.T01:intron 35.0%
!! CTGAGTTGATCCATTTCTTT+GGG - Chr4:30964475-30964494 None:intergenic 35.0%
!! CTTTTGGATGTTACTTAGTG+GGG + Chr4:30964976-30964995 MsG0480019969.01.T01:intron 35.0%
!! GTTCTTGCTATATTTTGGAG+AGG + Chr4:30966516-30966535 MsG0480019969.01.T01:intron 35.0%
!! TGAGCATAAACTTTTAGCTG+TGG - Chr4:30969463-30969482 None:intergenic 35.0%
!! TTACATACAAGGTTTGCTGT+TGG - Chr4:30971035-30971054 None:intergenic 35.0%
!! TTGCTATATTTTGGAGAGGT+TGG + Chr4:30966520-30966539 MsG0480019969.01.T01:intron 35.0%
!!! AGTTTTGAGTACAGAATCAC+TGG - Chr4:30966081-30966100 None:intergenic 35.0%
!!! TCAGGCAAACCATTTTTTGA+TGG - Chr4:30966058-30966077 None:intergenic 35.0%
AAAAGTGACAAGAGGATCAG+AGG + Chr4:30970546-30970565 MsG0480019969.01.T01:intron 40.0%
AAAGAACTGCGCTTCATCAT+TGG - Chr4:30969978-30969997 None:intergenic 40.0%
AAAGTGACAAGAGGATCAGA+GGG + Chr4:30970547-30970566 MsG0480019969.01.T01:intron 40.0%
AAATGAGGAGGAATGGTCTA+TGG + Chr4:30968492-30968511 MsG0480019969.01.T01:CDS 40.0%
AACAAGCCCCGATAAATTCA+TGG - Chr4:30970645-30970664 None:intergenic 40.0%
AAGAAAGCAGCTTCAAGTCT+TGG + Chr4:30965478-30965497 MsG0480019969.01.T01:CDS 40.0%
AAGAAGATACTCACCAACAC+TGG - Chr4:30969903-30969922 None:intergenic 40.0%
AAGATGGAAGCCAAAATGCA+CGG + Chr4:30968452-30968471 MsG0480019969.01.T01:CDS 40.0%
AAGTAGCAAAAGGAACACCA+AGG - Chr4:30969580-30969599 None:intergenic 40.0%
AAGTCACTAAGAACTGTCTG+TGG + Chr4:30968388-30968407 MsG0480019969.01.T01:CDS 40.0%
AAGTGTCAGCAAGTAGCAAA+AGG - Chr4:30969590-30969609 None:intergenic 40.0%
ACTTAATAACAGGATGCTGC+TGG + Chr4:30965222-30965241 MsG0480019969.01.T01:intron 40.0%
AGAGTCCTTAGACAAACATC+TGG + Chr4:30964517-30964536 MsG0480019969.01.T01:CDS 40.0%
AGCTTAGCTGAGTATCATGT+AGG - Chr4:30970214-30970233 None:intergenic 40.0%
AGGAATGGTCTATGGTTCAA+GGG + Chr4:30968500-30968519 MsG0480019969.01.T01:CDS 40.0%
AGTGAGACTATGATGGCTAT+AGG + Chr4:30966277-30966296 MsG0480019969.01.T01:CDS 40.0%
ATAGGTATGGACAAATGGAG+CGG + Chr4:30968116-30968135 MsG0480019969.01.T01:intron 40.0%
ATAGTCTCACTTAGCAACCT+CGG - Chr4:30966268-30966287 None:intergenic 40.0%
ATCGACCAGATGTTTGTCTA+AGG - Chr4:30964525-30964544 None:intergenic 40.0%
ATCTATTCCTGCAATCTCAG+AGG - Chr4:30968152-30968171 None:intergenic 40.0%
ATTCAGTACATCACAGATCG+CGG + Chr4:30970846-30970865 MsG0480019969.01.T01:CDS 40.0%
ATTCCTGTGATTTAGGCAAG+GGG - Chr4:30968956-30968975 None:intergenic 40.0%
ATTCTTCCCAGTGCCAATTT+AGG + Chr4:30967981-30968000 MsG0480019969.01.T01:intron 40.0%
ATTTGGGAGGAAAATTGGGT+CGG + Chr4:30966562-30966581 MsG0480019969.01.T01:intron 40.0%
CAAAACAGGAACCAATTTGG+TGG + Chr4:30965155-30965174 MsG0480019969.01.T01:intron 40.0%
CAAATTCTCAAATTGGTCCC+CGG - Chr4:30965132-30965151 None:intergenic 40.0%
CAATGGAGGTAGGAAAGATT+TGG + Chr4:30966545-30966564 MsG0480019969.01.T01:intron 40.0%
CAATTGGAGAATGACAATGC+AGG - Chr4:30965850-30965869 None:intergenic 40.0%
CACAAGTTCATTGACAGTGT+CGG - Chr4:30969750-30969769 None:intergenic 40.0%
CAGGGACCAAAATGAGAATT+TGG - Chr4:30964864-30964883 None:intergenic 40.0%
CATCCTCCTAAAACTCAAGA+AGG + Chr4:30964694-30964713 MsG0480019969.01.T01:CDS 40.0%
CTGCATTGTCATTCTCCAAT+TGG + Chr4:30965848-30965867 MsG0480019969.01.T01:CDS 40.0%
CTTCAGAGTTTCTTGTAGAG+TGG - Chr4:30968371-30968390 None:intergenic 40.0%
CTTGCGATTGGATAATGCAT+CGG - Chr4:30965540-30965559 None:intergenic 40.0%
CTTGGGTTTCTATCATACTG+AGG - Chr4:30967170-30967189 None:intergenic 40.0%
CTTTACATAGAACAGTTGCG+TGG + Chr4:30970822-30970841 MsG0480019969.01.T01:CDS 40.0%
GACATATGGCCTCAATATTG+TGG + Chr4:30967722-30967741 MsG0480019969.01.T01:intron 40.0%
GCAAATGTTGACATCTGACA+TGG - Chr4:30966012-30966031 None:intergenic 40.0%
GCTTGGTTGTAATCTGCAAA+TGG + Chr4:30969421-30969440 MsG0480019969.01.T01:intron 40.0%
GTTGCTAAGTGAGACTATGA+TGG + Chr4:30966270-30966289 MsG0480019969.01.T01:CDS 40.0%
GTTTGTCTAAGGACTCTTCT+GGG - Chr4:30964514-30964533 None:intergenic 40.0%
TAAGAGGAGCTGTAATTCGA+GGG + Chr4:30968173-30968192 MsG0480019969.01.T01:CDS 40.0%
TAGGGTAACACAGCATAATG+TGG - Chr4:30967394-30967413 None:intergenic 40.0%
TATCATACTGAGGCTCTGTT+TGG - Chr4:30967160-30967179 None:intergenic 40.0%
TCAATTAAGTTCGACAGTGG+AGG + Chr4:30965251-30965270 MsG0480019969.01.T01:CDS 40.0%
TCGAAATTCTCGTTCGAGAA+TGG - Chr4:30964452-30964471 None:intergenic 40.0%
TCTCATATCAACCTTGCCAT+TGG + Chr4:30966313-30966332 MsG0480019969.01.T01:CDS 40.0%
TGAAGAGGGTCTTACATGTA+GGG + Chr4:30969189-30969208 MsG0480019969.01.T01:intron 40.0%
TGATCTCAAATGAGGAGGAA+TGG + Chr4:30968485-30968504 MsG0480019969.01.T01:CDS 40.0%
TGCAACAGAATGGATGTTCA+AGG + Chr4:30969997-30970016 MsG0480019969.01.T01:CDS 40.0%
TGTTTGTCTAAGGACTCTTC+TGG - Chr4:30964515-30964534 None:intergenic 40.0%
TTAAGAGGAGCTGTAATTCG+AGG + Chr4:30968172-30968191 MsG0480019969.01.T01:CDS 40.0%
TTATCTGGGGACATGCAAAA+GGG + Chr4:30967465-30967484 MsG0480019969.01.T01:CDS 40.0%
TTCACTGAGTTCAACTCCTT+GGG - Chr4:30968206-30968225 None:intergenic 40.0%
TTTATCTGGGGACATGCAAA+AGG + Chr4:30967464-30967483 MsG0480019969.01.T01:CDS 40.0%
TTTCACCTCCTATTCAAGGA+GGG - Chr4:30969311-30969330 None:intergenic 40.0%
TTTCACTGAGTTCAACTCCT+TGG - Chr4:30968207-30968226 None:intergenic 40.0%
! AATCAACTCTCCGTGCATTT+TGG - Chr4:30968465-30968484 None:intergenic 40.0%
! ACTCTTCAGCCTTTTGAATC+AGG + Chr4:30968762-30968781 MsG0480019969.01.T01:CDS 40.0%
! CCCTGTCTTCTTAACTTTTG+AGG - Chr4:30970279-30970298 None:intergenic 40.0%
! CTTTCTGCACATATGGACTA+TGG + Chr4:30970731-30970750 MsG0480019969.01.T01:intron 40.0%
! CTTTTTACCAAACAGAGCCT+AGG - Chr4:30966753-30966772 None:intergenic 40.0%
! GTCAAACCACTAGCTTATAG+TGG - Chr4:30967133-30967152 None:intergenic 40.0%
! TCTTCCCAAAGCTGCTTTAT+TGG - Chr4:30965736-30965755 None:intergenic 40.0%
! TGTTCCAGAAACAAAAGCAC+TGG + Chr4:30966342-30966361 MsG0480019969.01.T01:CDS 40.0%
! TTTTCACCTCCTATTCAAGG+AGG - Chr4:30969312-30969331 None:intergenic 40.0%
!! ATCTTTTAGCTGGTCTCTTG+AGG - Chr4:30970976-30970995 None:intergenic 40.0%
!! GAAACAAAAGCACTGGCTAA+AGG + Chr4:30966349-30966368 MsG0480019969.01.T01:CDS 40.0%
!! GCTGAGTTGATCCATTTCTT+TGG - Chr4:30964476-30964495 None:intergenic 40.0%
!! TGTTGTTGTTTAGGTTGACG+CGG + Chr4:30965630-30965649 MsG0480019969.01.T01:intron 40.0%
!! TTAGCCAGTGCTTTTGTTTC+TGG - Chr4:30966349-30966368 None:intergenic 40.0%
!! TTTTGGAGAGGTTGGATCAA+TGG + Chr4:30966528-30966547 MsG0480019969.01.T01:intron 40.0%
!!! CTTCTTGAGTTTTAGGAGGA+TGG - Chr4:30964696-30964715 None:intergenic 40.0%
!!! GCTTTTTCACCTCCTATTCA+AGG - Chr4:30969315-30969334 None:intergenic 40.0%
AAAATTGGGTCGGGCAAGTT+CGG + Chr4:30966572-30966591 MsG0480019969.01.T01:intron 45.0%
AAAGCAGCTTCAAGTCTTGG+AGG + Chr4:30965481-30965500 MsG0480019969.01.T01:CDS 45.0%
AACTCAGTGAAACCGTTCGT+AGG + Chr4:30968215-30968234 MsG0480019969.01.T01:CDS 45.0%
AAGAGGAGCTGTAATTCGAG+GGG + Chr4:30968174-30968193 MsG0480019969.01.T01:CDS 45.0%
ACGATCAGAGGTAGACTGTT+TGG - Chr4:30967089-30967108 None:intergenic 45.0%
ACTAAGAACTGTCTGTGGTG+TGG + Chr4:30968393-30968412 MsG0480019969.01.T01:CDS 45.0%
AGATAAGCACGTACGATCAG+AGG - Chr4:30967101-30967120 None:intergenic 45.0%
AGCTGCGTATGAAACTTTGC+AGG + Chr4:30964784-30964803 MsG0480019969.01.T01:CDS 45.0%
AGCTTCAAGTCTTGGAGGAT+AGG + Chr4:30965486-30965505 MsG0480019969.01.T01:CDS 45.0%
AGGTTACGTGTTTGACACCA+TGG + Chr4:30965558-30965577 MsG0480019969.01.T01:intron 45.0%
AGTGAAGCTGATGCATCTCT+CGG - Chr4:30968287-30968306 None:intergenic 45.0%
ATGTAAAAGAGGGGAGATGG+TGG - Chr4:30971096-30971115 None:intergenic 45.0%
ATGTGTCCCGTTTGCCAATA+TGG + Chr4:30969810-30969829 MsG0480019969.01.T01:CDS 45.0%
CAAAAGGCTGAAGAGTTTCC+TGG - Chr4:30968758-30968777 None:intergenic 45.0%
CAAACACGTAACCTTGCGAT+TGG - Chr4:30965552-30965571 None:intergenic 45.0%
CAGATGGTTTCCGAGGAAAT+CGG + Chr4:30964560-30964579 MsG0480019969.01.T01:CDS 45.0%
CATAGGGTTCCTTTCCTAGT+AGG + Chr4:30966603-30966622 MsG0480019969.01.T01:intron 45.0%
CCTCCTAAAACTCAAGAAGG+CGG + Chr4:30964697-30964716 MsG0480019969.01.T01:CDS 45.0%
CCTTAGACATGGCAACACTA+CGG + Chr4:30968710-30968729 MsG0480019969.01.T01:CDS 45.0%
CGATGCATTATCCAATCGCA+AGG + Chr4:30965538-30965557 MsG0480019969.01.T01:CDS 45.0%
CGCAGTTCTTTGCAACAGAA+TGG + Chr4:30969987-30970006 MsG0480019969.01.T01:CDS 45.0%
CGGGGACCAATTTGAGAATT+TGG + Chr4:30965130-30965149 MsG0480019969.01.T01:intron 45.0%
CTAAAACTCAAGAAGGCGGA+GGG + Chr4:30964701-30964720 MsG0480019969.01.T01:CDS 45.0%
CTAGATATTCCCTCAGCAAG+GGG - Chr4:30969947-30969966 None:intergenic 45.0%
CTGAAGAGGGTCTTACATGT+AGG + Chr4:30969188-30969207 MsG0480019969.01.T01:intron 45.0%
CTGAGGACCATATTGGCAAA+CGG - Chr4:30969820-30969839 None:intergenic 45.0%
GAAACTTCAGATGGTTTCCG+AGG + Chr4:30964553-30964572 MsG0480019969.01.T01:CDS 45.0%
GAAATGTAGCCAGAACTGCA+GGG - Chr4:30970938-30970957 None:intergenic 45.0%
GAGGAATGGTCTATGGTTCA+AGG + Chr4:30968499-30968518 MsG0480019969.01.T01:CDS 45.0%
GCTAGATATTCCCTCAGCAA+GGG - Chr4:30969948-30969967 None:intergenic 45.0%
GGAAAGAAAGAGGCGAAAGA+TGG + Chr4:30968436-30968455 MsG0480019969.01.T01:CDS 45.0%
GGAATGGTCTATGGTTCAAG+GGG + Chr4:30968501-30968520 MsG0480019969.01.T01:CDS 45.0%
GTAAATCAATCAAGGCCTCC+AGG - Chr4:30967512-30967531 None:intergenic 45.0%
GTGGATATGCACTGAAGGTA+GGG - Chr4:30969868-30969887 None:intergenic 45.0%
TAACCCCTTGCCTAAATCAC+AGG + Chr4:30968950-30968969 MsG0480019969.01.T01:intron 45.0%
TAGGTATGGACAAATGGAGC+GGG + Chr4:30968117-30968136 MsG0480019969.01.T01:intron 45.0%
TCAAGGAGGGGCAAAACAAA+AGG - Chr4:30969298-30969317 None:intergenic 45.0%
TCCTCAACTGAGGACCATAT+TGG - Chr4:30969827-30969846 None:intergenic 45.0%
TCGCCTCTTTCTTTCCAGTA+CGG - Chr4:30968432-30968451 None:intergenic 45.0%
TGAAATGTAGCCAGAACTGC+AGG - Chr4:30970939-30970958 None:intergenic 45.0%
TGAGGACCATATTGGCAAAC+GGG - Chr4:30969819-30969838 None:intergenic 45.0%
TGAGTACAGAATCACTGGTC+AGG - Chr4:30966076-30966095 None:intergenic 45.0%
TGCAACTCTTTGCGATGCAA+GGG - Chr4:30969720-30969739 None:intergenic 45.0%
TGCAATCTCAGAGGAAAGGA+TGG - Chr4:30968143-30968162 None:intergenic 45.0%
TGCTAGATATTCCCTCAGCA+AGG - Chr4:30969949-30969968 None:intergenic 45.0%
TGGAAAAATGGACGGGTCTA+TGG + Chr4:30967742-30967761 MsG0480019969.01.T01:intron 45.0%
TGTGGATATGCACTGAAGGT+AGG - Chr4:30969869-30969888 None:intergenic 45.0%
TTCACCTCCTATTCAAGGAG+GGG - Chr4:30969310-30969329 None:intergenic 45.0%
TTCCCAGTGCCAATTTAGGT+GGG + Chr4:30967985-30968004 MsG0480019969.01.T01:intron 45.0%
TTCCTGCAATCTCAGAGGAA+AGG - Chr4:30968147-30968166 None:intergenic 45.0%
TTGGAGAATGACAATGCAGG+TGG - Chr4:30965847-30965866 None:intergenic 45.0%
TTTGGGAGGAAAATTGGGTC+GGG + Chr4:30966563-30966582 MsG0480019969.01.T01:intron 45.0%
! AAGAGTTTCCTGGCTTTCTC+AGG - Chr4:30968748-30968767 None:intergenic 45.0%
! ACTGTCTGTGGTGTGGATTA+TGG + Chr4:30968400-30968419 MsG0480019969.01.T01:CDS 45.0%
! AGATGAGCTGATTCTTGCCT+TGG + Chr4:30968321-30968340 MsG0480019969.01.T01:CDS 45.0%
! GATAATGCATCGGTAAGACG+AGG - Chr4:30965530-30965549 None:intergenic 45.0%
! TAAGCTTCAGACAAAGCACC+TGG + Chr4:30967491-30967510 MsG0480019969.01.T01:CDS 45.0%
! TGTTTTGCCCCTCCTTGAAT+AGG + Chr4:30969300-30969319 MsG0480019969.01.T01:intron 45.0%
! TTGCTGTTGGCAGATCTAGT+TGG - Chr4:30971022-30971041 None:intergenic 45.0%
!! ATCCTTTCCTCTGAGATTGC+AGG + Chr4:30968142-30968161 MsG0480019969.01.T01:CDS 45.0%
!! CTGTACTCAAAACTTGGTGC+TGG + Chr4:30966087-30966106 MsG0480019969.01.T01:intron 45.0%
!! GTGGTATTGACTTGGGATCT+GGG + Chr4:30967928-30967947 MsG0480019969.01.T01:intron 45.0%
!! TACTCAAAACTTGGTGCTGG+TGG + Chr4:30966090-30966109 MsG0480019969.01.T01:intron 45.0%
!! TTCTGGAACAGCATCTCCAA+TGG - Chr4:30966332-30966351 None:intergenic 45.0%
!!! CTTGAGTTTTAGGAGGATGG+CGG - Chr4:30964693-30964712 None:intergenic 45.0%
AAACGGCATCATCACGGAGA+CGG - Chr4:30964652-30964671 None:intergenic 50.0%
AAATTGGGTCGGGCAAGTTC+GGG + Chr4:30966573-30966592 MsG0480019969.01.T01:intron 50.0%
ACACTGGTCACATAGGACTG+TGG - Chr4:30969887-30969906 None:intergenic 50.0%
AGACTCCTCCATCCTACGAA+CGG - Chr4:30968230-30968249 None:intergenic 50.0%
AGATGCATCAGCTTCACTGG+AGG + Chr4:30968289-30968308 MsG0480019969.01.T01:CDS 50.0%
AGCAAGGGGCTCCAATTGTT+GGG - Chr4:30969933-30969952 None:intergenic 50.0%
AGCCCACCTAAATTGGCACT+GGG - Chr4:30967990-30968009 None:intergenic 50.0%
AGGAGGGGCAAAACAAAAGG+AGG - Chr4:30969295-30969314 None:intergenic 50.0%
AGGTCGATGTAGTCAAGCAG+AGG + Chr4:30964756-30964775 MsG0480019969.01.T01:CDS 50.0%
ATGGTCCTCAGTTGAGGAAC+AGG + Chr4:30969829-30969848 MsG0480019969.01.T01:CDS 50.0%
CAGTCCTATGTGACCAGTGT+TGG + Chr4:30969887-30969906 MsG0480019969.01.T01:CDS 50.0%
CAGTGAAACCGTTCGTAGGA+TGG + Chr4:30968219-30968238 MsG0480019969.01.T01:CDS 50.0%
CCGTAGTGTTGCCATGTCTA+AGG - Chr4:30968713-30968732 None:intergenic 50.0%
CCTAAAACTCAAGAAGGCGG+AGG + Chr4:30964700-30964719 MsG0480019969.01.T01:CDS 50.0%
CCTGCCGCATCTTACATACA+AGG - Chr4:30971046-30971065 None:intergenic 50.0%
CCTTGTATGTAAGATGCGGC+AGG + Chr4:30971043-30971062 MsG0480019969.01.T01:CDS 50.0%
CGATGTAGTCAAGCAGAGGA+TGG + Chr4:30964760-30964779 MsG0480019969.01.T01:CDS 50.0%
CTAAGACGAAAAGGCTGCCT+TGG + Chr4:30969560-30969579 MsG0480019969.01.T01:intron 50.0%
CTCACCAACACTGGTCACAT+AGG - Chr4:30969894-30969913 None:intergenic 50.0%
CTGCAACTCTTTGCGATGCA+AGG - Chr4:30969721-30969740 None:intergenic 50.0%
CTTCCCAGTGCCAATTTAGG+TGG + Chr4:30967984-30968003 MsG0480019969.01.T01:intron 50.0%
GAAATGGAGAGGACTGCAAG+TGG + Chr4:30965802-30965821 MsG0480019969.01.T01:CDS 50.0%
GAACAGCATCTCCAATGGCA+AGG - Chr4:30966327-30966346 None:intergenic 50.0%
GAATCGAACCTGAGACCTTG+AGG - Chr4:30967965-30967984 None:intergenic 50.0%
GACAGCAGAACGGAGAGAAA+CGG - Chr4:30964669-30964688 None:intergenic 50.0%
GAGAGATGCATCAGCTTCAC+TGG + Chr4:30968286-30968305 MsG0480019969.01.T01:CDS 50.0%
GAGGGTCTTACATGTAGGGA+CGG + Chr4:30969193-30969212 MsG0480019969.01.T01:intron 50.0%
GAGGTTGGATCAATGGAGGT+AGG + Chr4:30966535-30966554 MsG0480019969.01.T01:intron 50.0%
GATCCCAAGTCAATACCACC+AGG - Chr4:30967927-30967946 None:intergenic 50.0%
GCAACTCTTTGCGATGCAAG+GGG - Chr4:30969719-30969738 None:intergenic 50.0%
GCCAATATGGTCCTCAGTTG+AGG + Chr4:30969823-30969842 MsG0480019969.01.T01:CDS 50.0%
GGACTGTGGATATGCACTGA+AGG - Chr4:30969873-30969892 None:intergenic 50.0%
GGAGAGAAACGGCATCATCA+CGG - Chr4:30964658-30964677 None:intergenic 50.0%
GGAGCCATCTTTAGGTGGAA+GGG + Chr4:30968684-30968703 MsG0480019969.01.T01:CDS 50.0%
GGAGGATAGGCTAGACACAA+TGG + Chr4:30965499-30965518 MsG0480019969.01.T01:CDS 50.0%
GGAGGTAGGAAAGATTTGGG+AGG + Chr4:30966549-30966568 MsG0480019969.01.T01:intron 50.0%
GTATCACGGGGACCTTTGTT+AGG + Chr4:30967535-30967554 MsG0480019969.01.T01:CDS 50.0%
GTCTATATCGGCACTCGCTA+AGG + Chr4:30964736-30964755 MsG0480019969.01.T01:CDS 50.0%
TACTGAGGCTCTGTTTGGCA+AGG - Chr4:30967155-30967174 None:intergenic 50.0%
TAGCCCACCTAAATTGGCAC+TGG - Chr4:30967991-30968010 None:intergenic 50.0%
TGAAACCGTTCGTAGGATGG+AGG + Chr4:30968222-30968241 MsG0480019969.01.T01:CDS 50.0%
TGAGTGACCTAGGCTCTGTT+TGG + Chr4:30966743-30966762 MsG0480019969.01.T01:intron 50.0%
TGGAGAGGTTGGATCAATGG+AGG + Chr4:30966531-30966550 MsG0480019969.01.T01:intron 50.0%
TGGTCCTCAGTTGAGGAACA+GGG + Chr4:30969830-30969849 MsG0480019969.01.T01:CDS 50.0%
TTGATGTGCCTGAGAAAGCC+AGG + Chr4:30968737-30968756 MsG0480019969.01.T01:CDS 50.0%
TTGTCGAGACTCGAGATGCA+TGG + Chr4:30967866-30967885 MsG0480019969.01.T01:intron 50.0%
TTTGCCCCTCCTTGAATAGG+AGG + Chr4:30969303-30969322 MsG0480019969.01.T01:intron 50.0%
! AAGTTCGGGTGAGGAGCATA+GGG + Chr4:30966587-30966606 MsG0480019969.01.T01:intron 50.0%
! AGGCATTGCTTGTCTGCTGT+CGG + Chr4:30965327-30965346 MsG0480019969.01.T01:CDS 50.0%
! AGGGGAAGTGCATGAAAACG+AGG - Chr4:30969701-30969720 None:intergenic 50.0%
! CCTCCGCCTTCTTGAGTTTT+AGG - Chr4:30964703-30964722 None:intergenic 50.0%
! GCTGGTCTCTTGAGGTAGAA+AGG - Chr4:30970968-30970987 None:intergenic 50.0%
! GTCTGTGGTGTGGATTATGG+TGG + Chr4:30968403-30968422 MsG0480019969.01.T01:CDS 50.0%
!! AAGAGAAGCGCCGATTTCCT+CGG - Chr4:30964573-30964592 None:intergenic 50.0%
!! GGTGGTATTGACTTGGGATC+TGG + Chr4:30967927-30967946 MsG0480019969.01.T01:intron 50.0%
!! TGGCCTGGTGGTATTGACTT+GGG + Chr4:30967921-30967940 MsG0480019969.01.T01:intron 50.0%
!! TTGGCCTGGTGGTATTGACT+TGG + Chr4:30967920-30967939 MsG0480019969.01.T01:intron 50.0%
!!! CCGCCTTCTTGAGTTTTAGG+AGG - Chr4:30964700-30964719 None:intergenic 50.0%
AATGCCCATCCCTGCAGTTC+TGG + Chr4:30970926-30970945 MsG0480019969.01.T01:CDS 55.0%
ACAATTGGAGCCCCTTGCTG+AGG + Chr4:30969934-30969953 MsG0480019969.01.T01:CDS 55.0%
AGACATGGCAACACTACGGC+TGG + Chr4:30968714-30968733 MsG0480019969.01.T01:CDS 55.0%
AGCACCCTGTTCCTCAACTG+AGG - Chr4:30969837-30969856 None:intergenic 55.0%
ATGGAGAGGACTGCAAGTGG+TGG + Chr4:30965805-30965824 MsG0480019969.01.T01:CDS 55.0%
CAATTGGAGCCCCTTGCTGA+GGG + Chr4:30969935-30969954 MsG0480019969.01.T01:CDS 55.0%
CAGCAAGGGGCTCCAATTGT+TGG - Chr4:30969934-30969953 None:intergenic 55.0%
CAGCTTCACTGGAGGTTCTG+AGG + Chr4:30968297-30968316 MsG0480019969.01.T01:CDS 55.0%
CCAAAGTTTCAGCGGCACGA+GGG - Chr4:30965299-30965318 None:intergenic 55.0%
CGGAGCCATCTTTAGGTGGA+AGG + Chr4:30968683-30968702 MsG0480019969.01.T01:CDS 55.0%
GACGATGCGGAGCCATCTTT+AGG + Chr4:30968676-30968695 MsG0480019969.01.T01:CDS 55.0%
GAGACGGATGACATCACGAG+TGG - Chr4:30964636-30964655 None:intergenic 55.0%
GATGCGGAGCCATCTTTAGG+TGG + Chr4:30968679-30968698 MsG0480019969.01.T01:CDS 55.0%
GCAAGGGGCTCCAATTGTTG+GGG - Chr4:30969932-30969951 None:intergenic 55.0%
GCAGCCCTTCCACCTAAAGA+TGG - Chr4:30968691-30968710 None:intergenic 55.0%
GGAGCTGTAATTCGAGGGGT+AGG + Chr4:30968178-30968197 MsG0480019969.01.T01:CDS 55.0%
GGTCTTACATGTAGGGACGG+CGG + Chr4:30969196-30969215 MsG0480019969.01.T01:intron 55.0%
GTAGCCAGAACTGCAGGGAT+GGG - Chr4:30970933-30970952 None:intergenic 55.0%
GTGGAGGATGTATTCGCCAG+TGG + Chr4:30965267-30965286 MsG0480019969.01.T01:CDS 55.0%
TCGAACCTGAGACCTTGAGG+AGG - Chr4:30967962-30967981 None:intergenic 55.0%
TGGAAGGGCTGCCTTAGACA+TGG + Chr4:30968699-30968718 MsG0480019969.01.T01:CDS 55.0%
TGTAGCCAGAACTGCAGGGA+TGG - Chr4:30970934-30970953 None:intergenic 55.0%
TTGCTTGTCTGCTGTCGGAG+AGG + Chr4:30965332-30965351 MsG0480019969.01.T01:CDS 55.0%
! CAAGTTCGGGTGAGGAGCAT+AGG + Chr4:30966586-30966605 MsG0480019969.01.T01:intron 55.0%
! GCTTCAGACAAAGCACCTGG+AGG + Chr4:30967494-30967513 MsG0480019969.01.T01:CDS 55.0%
!! AAAACCCACTTGGGTTGGCC+TGG + Chr4:30967906-30967925 MsG0480019969.01.T01:intron 55.0%
!! AGGGATGGGCATTGACAGAG+CGG - Chr4:30970919-30970938 None:intergenic 55.0%
ACCACCAGGCCAACCCAAGT+GGG - Chr4:30967913-30967932 None:intergenic 60.0%
ATGACATCACGAGTGGCGCG+AGG - Chr4:30964629-30964648 None:intergenic 60.0%
ATTCGAGGGGTAGGAGCCCA+AGG + Chr4:30968187-30968206 MsG0480019969.01.T01:CDS 60.0%
GACGCGGCTCAAGATTTGCG+TGG + Chr4:30965646-30965665 MsG0480019969.01.T01:CDS 60.0%
GAGAGGACTGCAAGTGGTGG+TGG + Chr4:30965808-30965827 MsG0480019969.01.T01:CDS 60.0%
GCCAAAGTTTCAGCGGCACG+AGG - Chr4:30965300-30965319 None:intergenic 60.0%
GTGCTCCTCCTCAAGGTCTC+AGG + Chr4:30967954-30967973 MsG0480019969.01.T01:intron 60.0%
TACCACCAGGCCAACCCAAG+TGG - Chr4:30967914-30967933 None:intergenic 60.0%
TGACATCACGAGTGGCGCGA+GGG - Chr4:30964628-30964647 None:intergenic 60.0%
! CCCTCGTGCCGCTGAAACTT+TGG + Chr4:30965296-30965315 MsG0480019969.01.T01:CDS 60.0%
!! GGATGGCGGAGACAGCAGAA+CGG - Chr4:30964679-30964698 None:intergenic 60.0%
!! TGGGAGAGTGCTCCTCCTCA+AGG + Chr4:30967947-30967966 MsG0480019969.01.T01:intron 60.0%
GGCACGAGGGAGATCACCAC+TGG - Chr4:30965286-30965305 None:intergenic 65.0%
!! ACCCACTTGGGTTGGCCTGG+TGG + Chr4:30967909-30967928 MsG0480019969.01.T01:intron 65.0%
CACGAGTGGCGCGAGGGACA+CGG - Chr4:30964622-30964641 None:intergenic 70.0%
GCGAGGGACACGGAGGAGTG+CGG - Chr4:30964612-30964631 None:intergenic 70.0%
GGGTCGGGCAAGTTCGGGTG+AGG + Chr4:30966578-30966597 MsG0480019969.01.T01:intron 70.0%
! AGGGACACGGAGGAGTGCGG+CGG - Chr4:30964609-30964628 None:intergenic 70.0%
GAGTGGCGCGAGGGACACGG+AGG - Chr4:30964619-30964638 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 30964431 30971267 30964431 ID=MsG0480019969.01;Name=MsG0480019969.01
Chr4 mRNA 30964431 30971267 30964431 ID=MsG0480019969.01.T01;Parent=MsG0480019969.01;Name=MsG0480019969.01.T01;_AED=0.32;_eAED=0.32;_QI=0|0.87|0.88|1|1|1|9|185|842
Chr4 exon 30964431 30964835 30964431 ID=MsG0480019969.01.T01:exon:10074;Parent=MsG0480019969.01.T01
Chr4 exon 30965234 30965353 30965234 ID=MsG0480019969.01.T01:exon:10075;Parent=MsG0480019969.01.T01
Chr4 exon 30965458 30965559 30965458 ID=MsG0480019969.01.T01:exon:10076;Parent=MsG0480019969.01.T01
Chr4 exon 30965643 30965923 30965643 ID=MsG0480019969.01.T01:exon:10077;Parent=MsG0480019969.01.T01
Chr4 exon 30966225 30966370 30966225 ID=MsG0480019969.01.T01:exon:10078;Parent=MsG0480019969.01.T01
Chr4 exon 30967451 30967649 30967451 ID=MsG0480019969.01.T01:exon:10079;Parent=MsG0480019969.01.T01
Chr4 exon 30968120 30968783 30968120 ID=MsG0480019969.01.T01:exon:10080;Parent=MsG0480019969.01.T01
Chr4 exon 30969689 30970018 30969689 ID=MsG0480019969.01.T01:exon:10081;Parent=MsG0480019969.01.T01
Chr4 exon 30970801 30971267 30970801 ID=MsG0480019969.01.T01:exon:10082;Parent=MsG0480019969.01.T01
Chr4 CDS 30964431 30964835 30964431 ID=MsG0480019969.01.T01:cds;Parent=MsG0480019969.01.T01
Chr4 CDS 30965234 30965353 30965234 ID=MsG0480019969.01.T01:cds;Parent=MsG0480019969.01.T01
Chr4 CDS 30965458 30965559 30965458 ID=MsG0480019969.01.T01:cds;Parent=MsG0480019969.01.T01
Chr4 CDS 30965643 30965923 30965643 ID=MsG0480019969.01.T01:cds;Parent=MsG0480019969.01.T01
Chr4 CDS 30966225 30966370 30966225 ID=MsG0480019969.01.T01:cds;Parent=MsG0480019969.01.T01
Chr4 CDS 30967451 30967649 30967451 ID=MsG0480019969.01.T01:cds;Parent=MsG0480019969.01.T01
Chr4 CDS 30968120 30968783 30968120 ID=MsG0480019969.01.T01:cds;Parent=MsG0480019969.01.T01
Chr4 CDS 30969689 30970018 30969689 ID=MsG0480019969.01.T01:cds;Parent=MsG0480019969.01.T01
Chr4 CDS 30970801 30971082 30970801 ID=MsG0480019969.01.T01:cds;Parent=MsG0480019969.01.T01
Chr4 three_prime_UTR 30971083 30971267 30971083 ID=MsG0480019969.01.T01:three_prime_utr;Parent=MsG0480019969.01.T01
Gene Sequence

>MsG0480019969.01.T01

ATGATGGTGGATTTGAGTCCATTCTCGAACGAGAATTTCGACCCAAAGAAATGGATCAACTCAGCTTGTCAGAGTCGACACCCAGAAGAGTCCTTAGACAAACATCTGGTCGATTTAGAGATGAAACTTCAGATGGTTTCCGAGGAAATCGGCGCTTCTCTTGAAGAACAAAGCGCCGCCGCACTCCTCCGTGTCCCTCGCGCCACTCGTGATGTCATCCGTCTCCGTGATGATGCCGTTTCTCTCCGTTCTGCTGTCTCCGCCATCCTCCTAAAACTCAAGAAGGCGGAGGGATCTTCGTCTGAGTCTATATCGGCACTCGCTAAGGTCGATGTAGTCAAGCAGAGGATGGAAGCTGCGTATGAAACTTTGCAGGTAGCGATACTGAATTTGAAATATGATATAGATGCTGCTGGATTAACTCAATTAAGTTCGACAGTGGAGGATGTATTCGCCAGTGGTGATCTCCCTCGTGCCGCTGAAACTTTGGCTAATATGAGGCATTGCTTGTCTGCTGTCGGAGAGGTTGCTGAATTTGCCAACATAAGAAAGCAGCTTCAAGTCTTGGAGGATAGGCTAGACACAATGGTGCAGCCTCGTCTTACCGATGCATTATCCAATCGCAAGGTTGACGCGGCTCAAGATTTGCGTGGAATTCTCATTAGAATTGGAAGGTTTAAGTCTCTGGAATCACAATATTCAAAGGTACATCTAAAACCAATAAAGCAGCTTTGGGAAGACTTTGAATCAAGAGAACGGGCTAATAAGTCTGCAAATGAGAAGAATGAAATGGAGAGGACTGCAAGTGGTGGTGGTTTTCAGTCAATTCCACCTGCATTGTCATTCTCCAATTGGTTACCAAGCTTTTATGATGAGCTACTACTTTATCTTGAACAAGAATGGAAATGGTGTATGGTTGCTTTTCCTGAAGATTATAAAACTCTTGTGCCGAGGTTGCTAAGTGAGACTATGATGGCTATAGGTGCAAGTTTCATATCTCATATCAACCTTGCCATTGGAGATGCTGTTCCAGAAACAAAAGCACTGGCTAAAGGTTTATCAGATATTTTATCTGGGGACATGCAAAAGGGTATTAAGCTTCAGACAAAGCACCTGGAGGCCTTGATTGATTTACACAGTATCACGGGGACCTTTGTTAGGAATATTCAGCACTTATTTTCTGGTTCTGATGTACAAATTTTAATGGATGTGCTGAAAGCTGTGTACTTGCCATATGAATCGTTTAAACAGAGGTATGGACAAATGGAGCGGGCCATCCTTTCCTCTGAGATTGCAGGAATAGATTTAAGAGGAGCTGTAATTCGAGGGGTAGGAGCCCAAGGAGTTGAACTCAGTGAAACCGTTCGTAGGATGGAGGAGTCTATTGCTCAAGTTATTATACTTCTTGAAGCATCTGCCGAGAGATGCATCAGCTTCACTGGAGGTTCTGAGGCAGATGAGCTGATTCTTGCCTTGGATGACATAATGTTAAAATACATTTCCACTCTACAAGAAACTCTGAAGTCACTAAGAACTGTCTGTGGTGTGGATTATGGTGGCGATGGTACTGGAAAGAAAGAGGCGAAAGATGGAAGCCAAAATGCACGGAGAGTTGATTTGATCTCAAATGAGGAGGAATGGTCTATGGTTCAAGGGGCGCTGCAGATCCTTACAGTTGCAGATAGTTTGACAAGCAGATCTTCTGTGTTTGAAGCATCTTTAAGAGCTACTCTTGCTAGACTAAGCACAACTTTATCTTTTTCAGCATTTGGTTCAAGACTAGATGAAAACCAGACTATAAATGGTAATGACGATGCGGAGCCATCTTTAGGTGGAAGGGCTGCCTTAGACATGGCAACACTACGGCTGGTTGATGTGCCTGAGAAAGCCAGGAAACTCTTCAGCCTTTTGAATCAGTCTAAAGATCCTCGTTTTCATGCACTTCCCCTTGCATCGCAAAGAGTTGCAGCATTTGCCGACACTGTCAATGAACTTGTGTATGATGTCCTCATATCTAAAGTAAGGCAACGACTCAGCGATGTGTCCCGTTTGCCAATATGGTCCTCAGTTGAGGAACAGGGTGCTTTTCATCTCCCTACCTTCAGTGCATATCCACAGTCCTATGTGACCAGTGTTGGTGAGTATCTTCTTACTTTACCCCAACAATTGGAGCCCCTTGCTGAGGGAATATCTAGCAGTGAAGCCAATGATGAAGCGCAGTTCTTTGCAACAGAATGGATGTTCAAGGTTGCAGAGGGTGCAACAGCACTTTACATAGAACAGTTGCGTGGGATTCAGTACATCACAGATCGCGGTGCACAGCAGCTATCAGTTGATATTGATTATCTTAGTAACGTGCTTTCCGCTCTGTCAATGCCCATCCCTGCAGTTCTGGCTACATTTCACAGTTGCCTTTCTACCTCAAGAGACCAGCTAAAAGATCTACTGAAGACAGATTCAGCAAACCAACTAGATCTGCCAACAGCAAACCTTGTATGTAAGATGCGGCAGGTGAATTTAGATTCATGA
Protein sequence

>MsG0480019969.01.T01

MMVDLSPFSNENFDPKKWINSACQSRHPEESLDKHLVDLEMKLQMVSEEIGASLEEQSAAALLRVPRATRDVIRLRDDAVSLRSAVSAILLKLKKAEGSSSESISALAKVDVVKQRMEAAYETLQVAILNLKYDIDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLQVLEDRLDTMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYSKVHLKPIKQLWEDFESRERANKSANEKNEMERTASGGGFQSIPPALSFSNWLPSFYDELLLYLEQEWKWCMVAFPEDYKTLVPRLLSETMMAIGASFISHINLAIGDAVPETKALAKGLSDILSGDMQKGIKLQTKHLEALIDLHSITGTFVRNIQHLFSGSDVQILMDVLKAVYLPYESFKQRYGQMERAILSSEIAGIDLRGAVIRGVGAQGVELSETVRRMEESIAQVIILLEASAERCISFTGGSEADELILALDDIMLKYISTLQETLKSLRTVCGVDYGGDGTGKKEAKDGSQNARRVDLISNEEEWSMVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFSAFGSRLDENQTINGNDDAEPSLGGRAALDMATLRLVDVPEKARKLFSLLNQSKDPRFHALPLASQRVAAFADTVNELVYDVLISKVRQRLSDVSRLPIWSSVEEQGAFHLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISSSEANDEAQFFATEWMFKVAEGATALYIEQLRGIQYITDRGAQQLSVDIDYLSNVLSALSMPIPAVLATFHSCLSTSRDQLKDLLKTDSANQLDLPTANLVCKMRQVNLDS*