AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044883.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044883.01.T01 MTR_8g061960 97.393 652 17 0 1 652 1 652 0.0 1338
MsG0880044883.01.T01 MTR_5g037300 71.624 659 164 8 1 652 1 643 0.0 943
MsG0880044883.01.T01 MTR_4g107360 58.089 649 221 9 10 652 12 615 0.0 760
MsG0880044883.01.T01 MTR_2g018770 57.532 551 227 4 108 652 140 689 0.0 676
MsG0880044883.01.T01 MTR_2g018770 56.404 445 189 2 108 547 140 584 0.0 529
MsG0880044883.01.T01 MTR_5g041210 36.576 514 294 11 147 652 148 637 7.38e-105 332
MsG0880044883.01.T01 MTR_5g041210 36.576 514 292 12 147 652 148 635 2.87e-103 328
MsG0880044883.01.T01 MTR_4g123090 34.470 557 321 16 106 649 116 641 1.21e-100 321
MsG0880044883.01.T01 MTR_2g078030 23.762 202 142 4 404 596 77 275 8.37e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044883.01.T01 AT5G62620 59.763 676 239 9 5 652 11 681 0.0 833
MsG0880044883.01.T01 AT1G74800 58.098 673 246 10 5 652 11 672 0.0 795
MsG0880044883.01.T01 AT1G27120 63.959 591 194 6 71 652 62 642 0.0 774
MsG0880044883.01.T01 AT1G27120 63.959 591 194 6 71 652 93 673 0.0 774
MsG0880044883.01.T01 AT5G62620 58.484 607 220 8 5 584 11 612 0.0 723
MsG0880044883.01.T01 AT4G21060 49.128 688 310 10 1 652 1 684 0.0 669
MsG0880044883.01.T01 AT4G21060 56.239 553 232 5 109 652 190 741 0.0 666
MsG0880044883.01.T01 AT1G26810 37.743 514 272 13 149 649 162 640 2.17e-101 323
MsG0880044883.01.T01 AT1G26810 37.743 514 272 13 149 649 162 640 2.17e-101 323
MsG0880044883.01.T01 AT3G06440 32.130 554 325 14 106 649 106 618 2.55e-90 293
MsG0880044883.01.T01 AT3G06440 34.753 446 262 10 211 649 166 589 7.88e-86 280

Find 158 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGAAGTTTAGGTCTATT+TGG 0.169932 8:+50887879 None:intergenic
AATAATCTGCCCTCTGTAAA+AGG 0.183415 8:+50886166 None:intergenic
AGCTACAAGTTCTGCCAATT+TGG 0.183454 8:-50883528 MsG0880044883.01.T01:CDS
GAATCATCATAATCCCTTTC+TGG 0.183757 8:+50887436 None:intergenic
GTTAAGGTTGCTTGGGTTAA+AGG 0.194686 8:-50887573 MsG0880044883.01.T01:CDS
AAGAAAGAAGCAGATTATTT+TGG 0.204064 8:-50885557 MsG0880044883.01.T01:CDS
CGGCATTCGATTTCGGTATC+TGG 0.208466 8:-50887474 MsG0880044883.01.T01:CDS
CGGTATCTGGGTCTGAATTA+AGG 0.234674 8:-50887461 MsG0880044883.01.T01:CDS
CTATTTGGAAAGAGTGAAAA+TGG 0.246823 8:+50887894 None:intergenic
GCTACAGGTCTATCTATAAA+AGG 0.255687 8:-50885971 MsG0880044883.01.T01:CDS
CTGCCATTCGTTCGGCAAAA+TGG 0.267173 8:+50885792 None:intergenic
TCTTTCACAATAGTTATCTT+AGG 0.271578 8:+50887342 None:intergenic
ACTGTAGCTATTGCTGAATA+TGG 0.284101 8:-50885482 MsG0880044883.01.T01:CDS
TGTGTTTCAGTTATTTAAAA+TGG 0.287863 8:-50883616 MsG0880044883.01.T01:intron
TGGAAGGAAGGATATAAATT+TGG 0.296241 8:-50885585 MsG0880044883.01.T01:CDS
AGCTCGATTCTTTGTTGCTT+TGG 0.307228 8:-50885720 MsG0880044883.01.T01:intron
TTCCTTGTGGGTTGACTTTG+TGG 0.312644 8:-50887416 MsG0880044883.01.T01:CDS
TATTATTATAGTTCCATATA+TGG 0.322272 8:-50885531 MsG0880044883.01.T01:CDS
TTTCCTTCAGAAGAAGCTTT+TGG 0.324063 8:-50887726 MsG0880044883.01.T01:CDS
TTGAGCAGAATACTTGTTAT+AGG 0.327690 8:-50887185 MsG0880044883.01.T01:CDS
AACCTTCAATGCACCCAAAT+TGG 0.328090 8:+50883514 None:intergenic
GGACGCCGCGATTGGCTCAT+TGG 0.330123 8:-50887374 MsG0880044883.01.T01:CDS
ATGAAAATATGAAGAAGTTT+AGG 0.341879 8:+50887870 None:intergenic
CTCCCCTTCGACATGGGAAA+TGG 0.350686 8:-50885224 MsG0880044883.01.T01:CDS
TGGTCTCATGTTACTGTTGT+TGG 0.353203 8:-50887396 MsG0880044883.01.T01:CDS
GGATTAAAATGCAGTATCTT+AGG 0.354208 8:+50887243 None:intergenic
AGGTCATAATGATCCATATA+TGG 0.354744 8:+50885518 None:intergenic
AGGGTTGAAGGTAGTTGATA+AGG 0.358762 8:-50887274 MsG0880044883.01.T01:CDS
TCCCATGTCGAAGGGGAGTA+TGG 0.361321 8:+50885229 None:intergenic
GCTACAAGTTCTGCCAATTT+GGG 0.368483 8:-50883527 MsG0880044883.01.T01:CDS
ACCTTCCAAGCCAGCGGTTA+AGG 0.369558 8:+50886135 None:intergenic
GTTCATTGTATCGAACTTTG+AGG 0.400305 8:-50884069 MsG0880044883.01.T01:CDS
TGGTGGTTACCTAGACTGAT+AGG 0.400696 8:-50886223 MsG0880044883.01.T01:CDS
TTCGTGTCGGCATTCGATTT+CGG 0.405972 8:-50887481 MsG0880044883.01.T01:CDS
ATGTCATTTGTCTTGGAGAT+TGG 0.406164 8:+50883475 None:intergenic
TGAGATTCAAAAGGCTGTTA+AGG 0.413060 8:-50887589 MsG0880044883.01.T01:CDS
TGCCAATTTGGGTGCATTGA+AGG 0.415571 8:-50883516 MsG0880044883.01.T01:CDS
TGCATCTGTGGCGCAAAACT+TGG 0.420403 8:+50885899 None:intergenic
TTAAGGTTGCTTGGGTTAAA+GGG 0.422490 8:-50887572 MsG0880044883.01.T01:CDS
GAAGTAGGAAAAGTAGGAAT+TGG 0.422824 8:-50885285 MsG0880044883.01.T01:CDS
TAGCCACTCAGAAGAGTCTA+AGG 0.423729 8:-50886251 MsG0880044883.01.T01:CDS
GACGCCGCGATTGGCTCATT+GGG 0.427107 8:-50887373 MsG0880044883.01.T01:CDS
CACATACATGTCATTTGTCT+TGG 0.427694 8:+50883468 None:intergenic
AAAGGCTGTTAAGGTTGCTT+GGG 0.435949 8:-50887580 MsG0880044883.01.T01:CDS
AAAAGGCTGTTAAGGTTGCT+TGG 0.438136 8:-50887581 MsG0880044883.01.T01:CDS
ATCACCTTCATTGAAATTCA+AGG 0.440006 8:+50887647 None:intergenic
ACTTTCTGCATCTCTTGCAT+TGG 0.442573 8:+50887675 None:intergenic
CTGTAGCTATTGCTGAATAT+GGG 0.443989 8:-50885481 MsG0880044883.01.T01:CDS
TGTTGTTGGGACGCCGCGAT+TGG 0.445218 8:-50887382 MsG0880044883.01.T01:CDS
TTCATTGGAATACTTTCTGC+TGG 0.447346 8:-50885818 MsG0880044883.01.T01:CDS
CTACAGGTCTATCTATAAAA+GGG 0.447690 8:-50885970 MsG0880044883.01.T01:CDS
TGATGACACGTTTGTTCGAT+TGG 0.459409 8:-50885322 MsG0880044883.01.T01:CDS
GATTGTACGTACCGTGCGAT+AGG 0.463277 8:+50886072 None:intergenic
CAGTTTATGATGGAGCTTCA+AGG 0.463408 8:-50887294 MsG0880044883.01.T01:CDS
GGCATTCGATTTCGGTATCT+GGG 0.464418 8:-50887473 MsG0880044883.01.T01:CDS
TCTAGGGCTGATGAAGATAC+TGG 0.467726 8:-50887123 MsG0880044883.01.T01:intron
TCCCCTTCGACATGGGAAAT+GGG 0.468977 8:-50885223 MsG0880044883.01.T01:CDS
GGTCTCATGTTACTGTTGTT+GGG 0.469975 8:-50887395 MsG0880044883.01.T01:CDS
TAGCTGTGCACAATCTCAAC+TGG 0.472227 8:+50883546 None:intergenic
TCCACCTTGAATTTCAATGA+AGG 0.475706 8:-50887651 MsG0880044883.01.T01:CDS
TATTTGGAAAGAGTGAAAAT+GGG 0.479952 8:+50887895 None:intergenic
TACTTGTTATAGGATGCAAT+GGG 0.480353 8:-50887175 MsG0880044883.01.T01:CDS
TAAAATGGAGGATGTGAGCA+TGG 0.482447 8:-50883601 MsG0880044883.01.T01:CDS
GGGTTAAAGGGAAGAGAATG+TGG 0.482692 8:-50887560 MsG0880044883.01.T01:CDS
TAGGTGGAGCTTTCCATTGA+GGG 0.482822 8:+50885864 None:intergenic
CATCTGTTATTGCAACATAG+TGG 0.484330 8:+50883420 None:intergenic
CTATAATCGCCTTTCAACCT+AGG 0.487531 8:+50887222 None:intergenic
CTGAATTAAGGAACCAGAAA+GGG 0.492000 8:-50887449 MsG0880044883.01.T01:CDS
ATAATCTGCCCTCTGTAAAA+GGG 0.497041 8:+50886167 None:intergenic
GATTCTATCATCAGTGAAGT+AGG 0.500328 8:-50885300 MsG0880044883.01.T01:CDS
TTCTCTCTTGAGGACGCTAC+AGG 0.504421 8:-50885986 MsG0880044883.01.T01:CDS
ACCTTAACCGCTGGCTTGGA+AGG 0.505641 8:-50886136 MsG0880044883.01.T01:CDS
GGATTATGATGATTCCTTGT+GGG 0.506492 8:-50887428 MsG0880044883.01.T01:CDS
ACCATACTCCCCTTCGACAT+GGG 0.507856 8:-50885230 MsG0880044883.01.T01:CDS
CCTACCTATGCCAATGGTCC+AGG 0.508571 8:-50884119 MsG0880044883.01.T01:CDS
GGTGTGAGGGATGGAAGTCT+AGG 0.508803 8:-50887140 MsG0880044883.01.T01:CDS
TGTGAAAGATGAGGATGAAA+AGG 0.508977 8:-50887328 MsG0880044883.01.T01:CDS
CTGCCCTCTGTAAAAGGGTA+TGG 0.513461 8:+50886172 None:intergenic
AGGATGTGAGCATGGGAATG+TGG 0.513659 8:-50883593 MsG0880044883.01.T01:CDS
TCTCACCTTAACCGCTGGCT+TGG 0.515460 8:-50886140 MsG0880044883.01.T01:CDS
AGTTTATGATGGAGCTTCAA+GGG 0.522778 8:-50887293 MsG0880044883.01.T01:CDS
GACAGTTGAAATGTGAAAAG+TGG 0.523152 8:-50886288 MsG0880044883.01.T01:CDS
CACCATACTCCCCTTCGACA+TGG 0.523407 8:-50885231 MsG0880044883.01.T01:CDS
ATCAGTGAAGTAGGAAAAGT+AGG 0.524766 8:-50885291 MsG0880044883.01.T01:CDS
ATCTTGAATTGCTCCCTCAA+TGG 0.525172 8:-50885877 MsG0880044883.01.T01:CDS
CAAGACAAATGACATGTATG+TGG 0.525921 8:-50883467 MsG0880044883.01.T01:CDS
ATTGTACGTACCGTGCGATA+GGG 0.528620 8:+50886073 None:intergenic
GATTATATAACCTGGACCAT+TGG 0.529246 8:+50884109 None:intergenic
CAAGTATTCTGCTCAATCAC+AGG 0.530364 8:+50887192 None:intergenic
GATGGAGCTTCAAGGGTTGA+AGG 0.531504 8:-50887286 MsG0880044883.01.T01:CDS
GTTGGTGTCACAGTTTATGA+TGG 0.531786 8:-50887304 MsG0880044883.01.T01:CDS
TTTGTTCTCACCTTAACCGC+TGG 0.535058 8:-50886145 MsG0880044883.01.T01:CDS
GGTTCTTCACTTAGGTGTGA+GGG 0.535415 8:-50887153 MsG0880044883.01.T01:CDS
AACACAAGATCACTTTCGAT+TGG 0.539724 8:-50886195 MsG0880044883.01.T01:CDS
CATGTAAAAGCATGGAAGGA+AGG 0.544497 8:-50885597 MsG0880044883.01.T01:intron
GGATGTGAGCATGGGAATGT+GGG 0.545023 8:-50883592 MsG0880044883.01.T01:CDS
TGCAATGGGGTTCTTCACTT+AGG 0.545087 8:-50887161 MsG0880044883.01.T01:CDS
GTTGAAGGTAGTTGATAAGG+AGG 0.547473 8:-50887271 MsG0880044883.01.T01:CDS
CATGATATTCTTAGCAGCTA+CGG 0.548061 8:+50885353 None:intergenic
GTTTCAGTTATTTAAAATGG+AGG 0.548781 8:-50883613 MsG0880044883.01.T01:intron
TGCCCATTTCCCATGTCGAA+GGG 0.549152 8:+50885221 None:intergenic
AGGTTGAAAGGCGATTATAG+TGG 0.550310 8:-50887219 MsG0880044883.01.T01:CDS
TCCACATTTACATCGAGAAT+AGG 0.558314 8:+50885845 None:intergenic
ATACTTGTTATAGGATGCAA+TGG 0.559411 8:-50887176 MsG0880044883.01.T01:CDS
ATAGGTGGAGCTTTCCATTG+AGG 0.567693 8:+50885863 None:intergenic
AGAATATTTCTGATTCGTGT+CGG 0.568247 8:-50887494 MsG0880044883.01.T01:CDS
CTGCCCATTTCCCATGTCGA+AGG 0.569297 8:+50885220 None:intergenic
AAAATGGAGGATGTGAGCAT+GGG 0.569668 8:-50883600 MsG0880044883.01.T01:CDS
TTATCATGTAAAAGCATGGA+AGG 0.573697 8:-50885601 MsG0880044883.01.T01:intron
ACACCAAAAGCTTCTTCTGA+AGG 0.576196 8:+50887723 None:intergenic
GAAATGGGCAGTCACATATG+AGG 0.581503 8:-50885208 MsG0880044883.01.T01:intron
TCTGAATTAAGGAACCAGAA+AGG 0.583101 8:-50887450 MsG0880044883.01.T01:CDS
GTGTGAGGGATGGAAGTCTA+GGG 0.583589 8:-50887139 MsG0880044883.01.T01:CDS
TTCTCAGGGATTCTCTCTTG+AGG 0.584628 8:-50885996 MsG0880044883.01.T01:intron
GCAAAACTTGGATGTGATGT+TGG 0.584778 8:+50885911 None:intergenic
GGTTACCATGTTAGTGTGGA+CGG 0.586613 8:-50886115 MsG0880044883.01.T01:CDS
ACCTATTCTCGATGTAAATG+TGG 0.589446 8:-50885846 MsG0880044883.01.T01:CDS
GGGTTCTTCACTTAGGTGTG+AGG 0.589610 8:-50887154 MsG0880044883.01.T01:CDS
GCCGCGATTGGCTCATTGGG+AGG 0.590813 8:-50887370 MsG0880044883.01.T01:CDS
CTTCACTTAGGTGTGAGGGA+TGG 0.592115 8:-50887149 MsG0880044883.01.T01:CDS
CAGAAGAGTCTAAGGCAACA+TGG 0.601853 8:-50886243 MsG0880044883.01.T01:CDS
AATTCATATTGCCAATGTAG+AGG 0.601946 8:+50885256 None:intergenic
GATAACTATTGTGAAAGATG+AGG 0.602101 8:-50887337 MsG0880044883.01.T01:CDS
ATTGGCAGAAGCCTCTACAT+TGG 0.603094 8:-50885267 MsG0880044883.01.T01:CDS
GGTTGAAAGGCGATTATAGT+GGG 0.603357 8:-50887218 MsG0880044883.01.T01:CDS
GGTTAAAGGGAAGAGAATGT+GGG 0.603835 8:-50887559 MsG0880044883.01.T01:CDS
TACCGTGCGATAGGGAAAAG+AGG 0.604636 8:+50886081 None:intergenic
AGCAATTCAAGATGCATCTG+TGG 0.605190 8:+50885887 None:intergenic
TCTGATGAGATTATATAACC+TGG 0.607335 8:+50884101 None:intergenic
TTAAAATGCAGTATCTTAGG+TGG 0.609426 8:+50887246 None:intergenic
GGGATTATGATGATTCCTTG+TGG 0.612272 8:-50887429 MsG0880044883.01.T01:CDS
GCTTTCCGTCCACACTAACA+TGG 0.613480 8:+50886110 None:intergenic
GAGTATCCTACCTATGCCAA+TGG 0.615258 8:-50884125 MsG0880044883.01.T01:CDS
ACATTTACATCGAGAATAGG+TGG 0.616720 8:+50885848 None:intergenic
GGTGGTTACCTAGACTGATA+GGG 0.628424 8:-50886222 MsG0880044883.01.T01:CDS
ATAACCTGGACCATTGGCAT+AGG 0.630027 8:+50884115 None:intergenic
TCCTCCCAATGAGCCAATCG+CGG 0.634777 8:+50887369 None:intergenic
GTGGGACAAATTGCAACACA+AGG 0.634974 8:-50883448 MsG0880044883.01.T01:CDS
GACCACAAAGTCAACCCACA+AGG 0.638897 8:+50887414 None:intergenic
AGATGAGGATGAAAAGGTGT+TGG 0.645170 8:-50887322 MsG0880044883.01.T01:CDS
CCTGGACCATTGGCATAGGT+AGG 0.646201 8:+50884119 None:intergenic
GCCCATTTCCCATGTCGAAG+GGG 0.651734 8:+50885222 None:intergenic
TACAGGTCTATCTATAAAAG+GGG 0.652857 8:-50885969 MsG0880044883.01.T01:CDS
AAGACAAATGACATGTATGT+GGG 0.657888 8:-50883466 MsG0880044883.01.T01:CDS
TTGCCTTAGACTCTTCTGAG+TGG 0.658495 8:+50886248 None:intergenic
CATGTCGAAGGGGAGTATGG+TGG 0.661237 8:+50885232 None:intergenic
CTACAGTCTTCACCACAACA+AGG 0.662236 8:+50885498 None:intergenic
TGTAGCTATTGCTGAATATG+GGG 0.663127 8:-50885480 MsG0880044883.01.T01:intron
CATTAACTCTCAGGAATGGG+CGG 0.663364 8:-50884153 MsG0880044883.01.T01:intron
GGATCATTATGACCTTGTTG+TGG 0.668629 8:-50885510 MsG0880044883.01.T01:CDS
GAATGGCAGTAAGAAAATCG+TGG 0.670813 8:-50885778 MsG0880044883.01.T01:CDS
GGAAGGTTACCATGTTAGTG+TGG 0.672154 8:-50886119 MsG0880044883.01.T01:CDS
ACCTTCATTGAAATTCAAGG+TGG 0.672198 8:+50887650 None:intergenic
TGGGACAAATTGCAACACAA+GGG 0.687567 8:-50883447 MsG0880044883.01.T01:CDS
ATGGTAACCTTCCAAGCCAG+CGG 0.693759 8:+50886129 None:intergenic
CTGAGTGGCTATCATCATCG+CGG 0.703585 8:+50886263 None:intergenic
ACTTGTTATAGGATGCAATG+GGG 0.747300 8:-50887174 MsG0880044883.01.T01:CDS
AAGAGTCTAAGGCAACATGG+TGG 0.757773 8:-50886240 MsG0880044883.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATTACAAAAGTCTTA+AGG - Chr8:50886741-50886760 MsG0880044883.01.T01:intron 15.0%
!! AATTATTACAAAAGTCTTAA+GGG - Chr8:50886742-50886761 MsG0880044883.01.T01:intron 15.0%
!! ATTTATACAAAACTATAAAG+CGG + Chr8:50884878-50884897 None:intergenic 15.0%
!! CATTGAATAATTAATGTATT+TGG - Chr8:50886244-50886263 MsG0880044883.01.T01:CDS 15.0%
!! CTAATGTATATTATATTACA+AGG + Chr8:50886899-50886918 None:intergenic 15.0%
!! TATTATTATAGTTCCATATA+TGG - Chr8:50885803-50885822 MsG0880044883.01.T01:CDS 15.0%
!!! ATTTTCAAAACTTATGAAAA+TGG + Chr8:50886846-50886865 None:intergenic 15.0%
!!! ATTTTCATAAGTTTTGAAAA+TGG - Chr8:50886845-50886864 MsG0880044883.01.T01:intron 15.0%
!! ATGAAAATATGAAGAAGTTT+AGG + Chr8:50883467-50883486 None:intergenic 20.0%
!! CATTGAATAATTAATGTATC+TGG + Chr8:50886283-50886302 None:intergenic 20.0%
!! GAATTAAAAACAATCACAAA+AGG + Chr8:50887155-50887174 None:intergenic 20.0%
!! TAGTTAGATTTCTATATTAC+TGG - Chr8:50886347-50886366 MsG0880044883.01.T01:intron 20.0%
!! TGTGTTTCAGTTATTTAAAA+TGG - Chr8:50887718-50887737 MsG0880044883.01.T01:CDS 20.0%
!!! ATTTGTTGCAAAAATAACAA+CGG - Chr8:50884835-50884854 MsG0880044883.01.T01:intron 20.0%
!!! GTTTACTTTGAAGTTAAAAA+AGG - Chr8:50884573-50884592 MsG0880044883.01.T01:intron 20.0%
!!! TAAACTTCTTCATATTTTCA+TGG - Chr8:50883466-50883485 MsG0880044883.01.T01:CDS 20.0%
! ATATAAGTTATAAGCTATCC+TGG - Chr8:50884411-50884430 MsG0880044883.01.T01:intron 25.0%
! ATTTGCAACAATCATTATCA+TGG - Chr8:50887070-50887089 MsG0880044883.01.T01:intron 25.0%
! GTATTTATCATGTAAAAGCA+TGG - Chr8:50885729-50885748 MsG0880044883.01.T01:CDS 25.0%
! TATTTGGAAAGAGTGAAAAT+GGG + Chr8:50883442-50883461 None:intergenic 25.0%
! TCTTTCACAATAGTTATCTT+AGG + Chr8:50883995-50884014 None:intergenic 25.0%
! TGAATTACTAGGTCATTTAA+TGG - Chr8:50886690-50886709 MsG0880044883.01.T01:intron 25.0%
! TTTAGAAAGTGAAAACAGAA+GGG - Chr8:50886963-50886982 MsG0880044883.01.T01:intron 25.0%
! TTTGTATAAATGCAGATACA+AGG - Chr8:50884887-50884906 MsG0880044883.01.T01:intron 25.0%
! TTTGTTGCAAAAATAACAAC+GGG - Chr8:50884836-50884855 MsG0880044883.01.T01:intron 25.0%
!! AAGAAAGAAGCAGATTATTT+TGG - Chr8:50885777-50885796 MsG0880044883.01.T01:CDS 25.0%
!! AATTCACCTTTGATTTCTAA+TGG - Chr8:50884724-50884743 MsG0880044883.01.T01:intron 25.0%
!! ATGATAATGATTGTTGCAAA+TGG + Chr8:50887071-50887090 None:intergenic 25.0%
!! GTCAATTTTATCATTACTGA+GGG + Chr8:50885664-50885683 None:intergenic 25.0%
!! GTTTCAGTTATTTAAAATGG+AGG - Chr8:50887721-50887740 MsG0880044883.01.T01:CDS 25.0%
!! TAAGCAAAGATTCTCTTTTT+AGG + Chr8:50886308-50886327 None:intergenic 25.0%
!! TATATTACTGGTTGTTATGT+GGG - Chr8:50886359-50886378 MsG0880044883.01.T01:intron 25.0%
!! TCAATTTTATCATTACTGAG+GGG + Chr8:50885663-50885682 None:intergenic 25.0%
!! TGTCAATTTTATCATTACTG+AGG + Chr8:50885665-50885684 None:intergenic 25.0%
!! TTTTTGCTTTATGAAGTTGA+TGG - Chr8:50885024-50885043 MsG0880044883.01.T01:intron 25.0%
!!! CAAATTTTCTGAGATTCAAA+AGG - Chr8:50883736-50883755 MsG0880044883.01.T01:intron 25.0%
!!! CATGCAAAGTATCTTTTTTT+AGG - Chr8:50886219-50886238 MsG0880044883.01.T01:CDS 25.0%
!!! CTCAAAAGTTTTGATTTCAA+AGG + Chr8:50883522-50883541 None:intergenic 25.0%
!!! TTTTAGAAAGTGAAAACAGA+AGG - Chr8:50886962-50886981 MsG0880044883.01.T01:intron 25.0%
AAAATGAAAACAGGACACAT+AGG + Chr8:50886779-50886798 None:intergenic 30.0%
AAGACAAATGACATGTATGT+GGG - Chr8:50887868-50887887 MsG0880044883.01.T01:CDS 30.0%
AATAAGCTGAAAACAGCTTA+TGG - Chr8:50887541-50887560 MsG0880044883.01.T01:CDS 30.0%
AATAATATCCATGGACATGA+AGG + Chr8:50884925-50884944 None:intergenic 30.0%
AATTCATATTGCCAATGTAG+AGG + Chr8:50886081-50886100 None:intergenic 30.0%
AGAAATCAAAGGTGAATTCT+AGG + Chr8:50884722-50884741 None:intergenic 30.0%
AGGTCATAATGATCCATATA+TGG + Chr8:50885819-50885838 None:intergenic 30.0%
AGTAATATAGCAGAAATCTG+AGG + Chr8:50885928-50885947 None:intergenic 30.0%
ATACAAAACTATAAAGCGGT+GGG + Chr8:50884874-50884893 None:intergenic 30.0%
ATACACTTGTGAGATTGTTT+AGG + Chr8:50884495-50884514 None:intergenic 30.0%
ATCACCTTCATTGAAATTCA+AGG + Chr8:50883690-50883709 None:intergenic 30.0%
CAAAGTGAAAAAGATGCATT+AGG - Chr8:50884767-50884786 MsG0880044883.01.T01:intron 30.0%
CAATACAGGAATAATATCCA+TGG + Chr8:50884934-50884953 None:intergenic 30.0%
CTACAGGTCTATCTATAAAA+GGG - Chr8:50885364-50885383 MsG0880044883.01.T01:intron 30.0%
CTATTTGGAAAGAGTGAAAA+TGG + Chr8:50883443-50883462 None:intergenic 30.0%
GAAATCAAAGGTGAATTCTA+GGG + Chr8:50884721-50884740 None:intergenic 30.0%
GATAACTATTGTGAAAGATG+AGG - Chr8:50883997-50884016 MsG0880044883.01.T01:intron 30.0%
GGATATTATTCCTGTATTGT+GGG - Chr8:50884935-50884954 MsG0880044883.01.T01:intron 30.0%
GGATTAAAATGCAGTATCTT+AGG + Chr8:50884094-50884113 None:intergenic 30.0%
GTAATATAGCAGAAATCTGA+GGG + Chr8:50885927-50885946 None:intergenic 30.0%
GTTGAAGTGAAAATGAAAAC+AGG + Chr8:50886788-50886807 None:intergenic 30.0%
TACAGGTCTATCTATAAAAG+GGG - Chr8:50885365-50885384 MsG0880044883.01.T01:intron 30.0%
TATAAAACCAAACACCTGTT+TGG + Chr8:50884548-50884567 None:intergenic 30.0%
TATACAAAACTATAAAGCGG+TGG + Chr8:50884875-50884894 None:intergenic 30.0%
TCAATGCCATTAGAAATCAA+AGG + Chr8:50884733-50884752 None:intergenic 30.0%
TCTGATGAGATTATATAACC+TGG + Chr8:50887236-50887255 None:intergenic 30.0%
TGAAGAAGTTTAGGTCTATT+TGG + Chr8:50883458-50883477 None:intergenic 30.0%
TGGAAGGAAGGATATAAATT+TGG - Chr8:50885749-50885768 MsG0880044883.01.T01:CDS 30.0%
TGGATATTATTCCTGTATTG+TGG - Chr8:50884934-50884953 MsG0880044883.01.T01:intron 30.0%
TTAAAATGCAGTATCTTAGG+TGG + Chr8:50884091-50884110 None:intergenic 30.0%
TTAAGTTAGTCAATCCAAAC+AGG - Chr8:50884531-50884550 MsG0880044883.01.T01:intron 30.0%
TTAGAAAGTGAAAACAGAAG+GGG - Chr8:50886964-50886983 MsG0880044883.01.T01:intron 30.0%
TTATAAAGTTGCTGATGTTG+TGG - Chr8:50884664-50884683 MsG0880044883.01.T01:intron 30.0%
TTCTGCGTTCAAAATGTAAA+AGG + Chr8:50885297-50885316 None:intergenic 30.0%
TTCTTTGTTCATTAACTCTC+AGG - Chr8:50887172-50887191 MsG0880044883.01.T01:CDS 30.0%
! AGAATATTTCTGATTCGTGT+CGG - Chr8:50883840-50883859 MsG0880044883.01.T01:intron 30.0%
! AGTTCAAAGCTTTTCTATGA+TGG + Chr8:50883589-50883608 None:intergenic 30.0%
! CTATATTACTGGTTGTTATG+TGG - Chr8:50886358-50886377 MsG0880044883.01.T01:intron 30.0%
! GGATGAAGTCATTTGAAATA+TGG - Chr8:50886659-50886678 MsG0880044883.01.T01:intron 30.0%
! GTTAGTTGATTCATGATGAT+AGG - Chr8:50884796-50884815 MsG0880044883.01.T01:intron 30.0%
! GTTCAAAGCTTTTCTATGAT+GGG + Chr8:50883588-50883607 None:intergenic 30.0%
! TTACTGATTGCTATTGAACT+TGG - Chr8:50885943-50885962 MsG0880044883.01.T01:CDS 30.0%
! TTATCATGTAAAAGCATGGA+AGG - Chr8:50885733-50885752 MsG0880044883.01.T01:CDS 30.0%
! TTATGTCAAGCAATTTTCAC+AGG - Chr8:50887497-50887516 MsG0880044883.01.T01:CDS 30.0%
!! AAAGCGTTTGTTATATTCTC+AGG - Chr8:50885323-50885342 MsG0880044883.01.T01:CDS 30.0%
!! AAGCGTTTGTTATATTCTCA+GGG - Chr8:50885324-50885343 MsG0880044883.01.T01:CDS 30.0%
!! AGATACTGCATTTTAATCCT+AGG - Chr8:50884095-50884114 MsG0880044883.01.T01:CDS 30.0%
!! ATACTTGTTATAGGATGCAA+TGG - Chr8:50884158-50884177 MsG0880044883.01.T01:intron 30.0%
!! CATTTTAATCCTAGGTTGAA+AGG - Chr8:50884103-50884122 MsG0880044883.01.T01:CDS 30.0%
!! GATTGACTTGTTTGAGTTTA+TGG + Chr8:50887617-50887636 None:intergenic 30.0%
!! TACTTGTTATAGGATGCAAT+GGG - Chr8:50884159-50884178 MsG0880044883.01.T01:intron 30.0%
!! TTAACTTGTGATGTGATTGT+TGG - Chr8:50884635-50884654 MsG0880044883.01.T01:intron 30.0%
!! TTGAGCAGAATACTTGTTAT+AGG - Chr8:50884149-50884168 MsG0880044883.01.T01:intron 30.0%
AACACAAGATCACTTTCGAT+TGG - Chr8:50885139-50885158 MsG0880044883.01.T01:intron 35.0%
AATAATCTGCCCTCTGTAAA+AGG + Chr8:50885171-50885190 None:intergenic 35.0%
ACATTTACATCGAGAATAGG+TGG + Chr8:50885489-50885508 None:intergenic 35.0%
ACCTATTCTCGATGTAAATG+TGG - Chr8:50885488-50885507 MsG0880044883.01.T01:CDS 35.0%
ACCTTCATTGAAATTCAAGG+TGG + Chr8:50883687-50883706 None:intergenic 35.0%
ACTGTAGCTATTGCTGAATA+TGG - Chr8:50885852-50885871 MsG0880044883.01.T01:CDS 35.0%
AGGACACATAGGAAGTAAAT+GGG + Chr8:50886768-50886787 None:intergenic 35.0%
ATAATCTGCCCTCTGTAAAA+GGG + Chr8:50885170-50885189 None:intergenic 35.0%
ATCAGTGAAGTAGGAAAAGT+AGG - Chr8:50886043-50886062 MsG0880044883.01.T01:intron 35.0%
ATGCAAACAGTAAACCTCTA+AGG + Chr8:50886495-50886514 None:intergenic 35.0%
ATTTCCGGAAAAAGATATCC+AGG + Chr8:50886624-50886643 None:intergenic 35.0%
CAAGACAAATGACATGTATG+TGG - Chr8:50887867-50887886 MsG0880044883.01.T01:CDS 35.0%
CATCTGTTATTGCAACATAG+TGG + Chr8:50887917-50887936 None:intergenic 35.0%
CATGATATTCTTAGCAGCTA+CGG + Chr8:50885984-50886003 None:intergenic 35.0%
CCAGAAGTAGTACATATTGA+AGG + Chr8:50886190-50886209 None:intergenic 35.0%
CCTTCAATATGTACTACTTC+TGG - Chr8:50886187-50886206 MsG0880044883.01.T01:CDS 35.0%
CTCCTAAGAGCAGAATATTT+AGG + Chr8:50887009-50887028 None:intergenic 35.0%
CTGAATTAAGGAACCAGAAA+GGG - Chr8:50883885-50883904 MsG0880044883.01.T01:intron 35.0%
CTGTAGCTATTGCTGAATAT+GGG - Chr8:50885853-50885872 MsG0880044883.01.T01:CDS 35.0%
GAAGTAGGAAAAGTAGGAAT+TGG - Chr8:50886049-50886068 MsG0880044883.01.T01:intron 35.0%
GAATCATCATAATCCCTTTC+TGG + Chr8:50883901-50883920 None:intergenic 35.0%
GACAGTTGAAATGTGAAAAG+TGG - Chr8:50885046-50885065 MsG0880044883.01.T01:intron 35.0%
GATTATATAACCTGGACCAT+TGG + Chr8:50887228-50887247 None:intergenic 35.0%
GATTCTATCATCAGTGAAGT+AGG - Chr8:50886034-50886053 MsG0880044883.01.T01:intron 35.0%
GCTACAGGTCTATCTATAAA+AGG - Chr8:50885363-50885382 MsG0880044883.01.T01:CDS 35.0%
GGATACTGTGTTTCATCTTT+AGG - Chr8:50887392-50887411 MsG0880044883.01.T01:CDS 35.0%
GGATTATGATGATTCCTTGT+GGG - Chr8:50883906-50883925 MsG0880044883.01.T01:intron 35.0%
GTAGTTGCAAATTGTTTGTC+TGG - Chr8:50886432-50886451 MsG0880044883.01.T01:intron 35.0%
GTTCATTAACTCTCAGGAAT+GGG - Chr8:50887178-50887197 MsG0880044883.01.T01:CDS 35.0%
GTTCATTGTATCGAACTTTG+AGG - Chr8:50887265-50887284 MsG0880044883.01.T01:CDS 35.0%
TACAAAACTATAAAGCGGTG+GGG + Chr8:50884873-50884892 None:intergenic 35.0%
TCATTTAATGGAAGTTCTGC+TGG - Chr8:50886702-50886721 MsG0880044883.01.T01:intron 35.0%
TCCACATTTACATCGAGAAT+AGG + Chr8:50885492-50885511 None:intergenic 35.0%
TCCACCTTGAATTTCAATGA+AGG - Chr8:50883683-50883702 MsG0880044883.01.T01:intron 35.0%
TCTGAATTAAGGAACCAGAA+AGG - Chr8:50883884-50883903 MsG0880044883.01.T01:intron 35.0%
TCTTTGCTTACATATGAGAC+CGG - Chr8:50886318-50886337 MsG0880044883.01.T01:intron 35.0%
TGAGATTCAAAAGGCTGTTA+AGG - Chr8:50883745-50883764 MsG0880044883.01.T01:intron 35.0%
TGGTGTGCATTTGAATTACT+AGG - Chr8:50886679-50886698 MsG0880044883.01.T01:intron 35.0%
TGTAGCTATTGCTGAATATG+GGG - Chr8:50885854-50885873 MsG0880044883.01.T01:CDS 35.0%
TGTGAAAGATGAGGATGAAA+AGG - Chr8:50884006-50884025 MsG0880044883.01.T01:intron 35.0%
TGTGCGAATATACGAATACT+TGG - Chr8:50886589-50886608 MsG0880044883.01.T01:intron 35.0%
TGTTCATTAACTCTCAGGAA+TGG - Chr8:50887177-50887196 MsG0880044883.01.T01:CDS 35.0%
TTAAGGTTGCTTGGGTTAAA+GGG - Chr8:50883762-50883781 MsG0880044883.01.T01:intron 35.0%
TTCATTGGAATACTTTCTGC+TGG - Chr8:50885516-50885535 MsG0880044883.01.T01:CDS 35.0%
TTTATCATTACTGAGGGGTA+GGG + Chr8:50885658-50885677 None:intergenic 35.0%
! AGGGGTTTTCACAAAGTAAA+TGG - Chr8:50886982-50887001 MsG0880044883.01.T01:intron 35.0%
! AGTTTATGATGGAGCTTCAA+GGG - Chr8:50884041-50884060 MsG0880044883.01.T01:intron 35.0%
! ATGTCATTTGTCTTGGAGAT+TGG + Chr8:50887862-50887881 None:intergenic 35.0%
! CACATACATGTCATTTGTCT+TGG + Chr8:50887869-50887888 None:intergenic 35.0%
! CTGAACATGTCAGTTTTCAT+AGG - Chr8:50884465-50884484 MsG0880044883.01.T01:intron 35.0%
! GGGGTTTTCACAAAGTAAAT+GGG - Chr8:50886983-50887002 MsG0880044883.01.T01:intron 35.0%
! GTAAATGTGGAGCTTTTCAT+TGG - Chr8:50885501-50885520 MsG0880044883.01.T01:CDS 35.0%
! GTACATATTGAAGGCATGAT+AGG + Chr8:50886181-50886200 None:intergenic 35.0%
! GTTTTCTGTGTAATGAACCT+TGG + Chr8:50883640-50883659 None:intergenic 35.0%
! TGTTGTTGATGTTGTTGACT+TGG - Chr8:50884274-50884293 MsG0880044883.01.T01:intron 35.0%
! TTTCCTTCAGAAGAAGCTTT+TGG - Chr8:50883608-50883627 MsG0880044883.01.T01:CDS 35.0%
! TTTTATCATTACTGAGGGGT+AGG + Chr8:50885659-50885678 None:intergenic 35.0%
! TTTTCTTACTGCCATTCGTT+CGG + Chr8:50885553-50885572 None:intergenic 35.0%
!! ACTTGTTATAGGATGCAATG+GGG - Chr8:50884160-50884179 MsG0880044883.01.T01:intron 35.0%
!! AGTTTCTAGTACTTTGACCA+TGG - Chr8:50886534-50886553 MsG0880044883.01.T01:intron 35.0%
!! CTTATTTTCATAAGCACACC+AGG + Chr8:50884432-50884451 None:intergenic 35.0%
!! GTTGTTGATGTTGTTGACTT+GGG - Chr8:50884275-50884294 MsG0880044883.01.T01:intron 35.0%
!!! CTTTTCTATGATGGGTGTTT+TGG + Chr8:50883580-50883599 None:intergenic 35.0%
!!! GCAGATACAAGGTGATTTTT+TGG - Chr8:50884898-50884917 MsG0880044883.01.T01:intron 35.0%
AAAAGGCTGTTAAGGTTGCT+TGG - Chr8:50883753-50883772 MsG0880044883.01.T01:intron 40.0%
AAAATGGAGGATGTGAGCAT+GGG - Chr8:50887734-50887753 MsG0880044883.01.T01:CDS 40.0%
AAAGGCTGTTAAGGTTGCTT+GGG - Chr8:50883754-50883773 MsG0880044883.01.T01:intron 40.0%
AACCTTCAATGCACCCAAAT+TGG + Chr8:50887823-50887842 None:intergenic 40.0%
ACAAAACTATAAAGCGGTGG+GGG + Chr8:50884872-50884891 None:intergenic 40.0%
ACACCAAAAGCTTCTTCTGA+AGG + Chr8:50883614-50883633 None:intergenic 40.0%
ACTTCATCCGCCAAATCATA+TGG + Chr8:50886648-50886667 None:intergenic 40.0%
ACTTTCTGCATCTCTTGCAT+TGG + Chr8:50883662-50883681 None:intergenic 40.0%
AGAAATCTAACTACTCCCTC+CGG + Chr8:50886340-50886359 None:intergenic 40.0%
AGCAATTCAAGATGCATCTG+TGG + Chr8:50885450-50885469 None:intergenic 40.0%
AGCTACAAGTTCTGCCAATT+TGG - Chr8:50887806-50887825 MsG0880044883.01.T01:CDS 40.0%
AGGTTGAAAGGCGATTATAG+TGG - Chr8:50884115-50884134 MsG0880044883.01.T01:CDS 40.0%
AGTATCCATGCATCACGAAA+GGG + Chr8:50887379-50887398 None:intergenic 40.0%
AGTCAATCCAAACAGGTGTT+TGG - Chr8:50884538-50884557 MsG0880044883.01.T01:intron 40.0%
ATCTTGAATTGCTCCCTCAA+TGG - Chr8:50885457-50885476 MsG0880044883.01.T01:intron 40.0%
ATGCACAAACTAGCAGACTT+AGG + Chr8:50887649-50887668 None:intergenic 40.0%
CAAGTATTCTGCTCAATCAC+AGG + Chr8:50884145-50884164 None:intergenic 40.0%
CAGGACACATAGGAAGTAAA+TGG + Chr8:50886769-50886788 None:intergenic 40.0%
CTATAATCGCCTTTCAACCT+AGG + Chr8:50884115-50884134 None:intergenic 40.0%
CTCAAACAAGTCAATCCAGA+CGG - Chr8:50887621-50887640 MsG0880044883.01.T01:CDS 40.0%
CTTCATCCGCCAAATCATAT+GGG + Chr8:50886647-50886666 None:intergenic 40.0%
GAATGGCAGTAAGAAAATCG+TGG - Chr8:50885556-50885575 MsG0880044883.01.T01:CDS 40.0%
GATGAGCAATGTTCCTTAGA+TGG + Chr8:50884984-50885003 None:intergenic 40.0%
GCAAAACTTGGATGTGATGT+TGG + Chr8:50885426-50885445 None:intergenic 40.0%
GCCAAATCATATGGGATTTC+CGG + Chr8:50886639-50886658 None:intergenic 40.0%
GCTACAAGTTCTGCCAATTT+GGG - Chr8:50887807-50887826 MsG0880044883.01.T01:CDS 40.0%
GGATCATTATGACCTTGTTG+TGG - Chr8:50885824-50885843 MsG0880044883.01.T01:CDS 40.0%
GGCCTAAATATTCTGCTCTT+AGG - Chr8:50887004-50887023 MsG0880044883.01.T01:intron 40.0%
GGGATTATGATGATTCCTTG+TGG - Chr8:50883905-50883924 MsG0880044883.01.T01:intron 40.0%
GGTCTCATGTTACTGTTGTT+GGG - Chr8:50883939-50883958 MsG0880044883.01.T01:intron 40.0%
GGTTAAAGGGAAGAGAATGT+GGG - Chr8:50883775-50883794 MsG0880044883.01.T01:intron 40.0%
GGTTGAAAGGCGATTATAGT+GGG - Chr8:50884116-50884135 MsG0880044883.01.T01:CDS 40.0%
GTTAAGGTTGCTTGGGTTAA+AGG - Chr8:50883761-50883780 MsG0880044883.01.T01:intron 40.0%
TAAAATGGAGGATGTGAGCA+TGG - Chr8:50887733-50887752 MsG0880044883.01.T01:CDS 40.0%
TAAGACCTTGACGTCAAACA+TGG + Chr8:50886459-50886478 None:intergenic 40.0%
TCACGAAAGGGGAAAATTAG+AGG + Chr8:50887367-50887386 None:intergenic 40.0%
TCCGGAAATCCCATATGATT+TGG - Chr8:50886635-50886654 MsG0880044883.01.T01:intron 40.0%
TGATGACACGTTTGTTCGAT+TGG - Chr8:50886012-50886031 MsG0880044883.01.T01:intron 40.0%
TGGGACAAATTGCAACACAA+GGG - Chr8:50887887-50887906 MsG0880044883.01.T01:CDS 40.0%
TGGTCTCATGTTACTGTTGT+TGG - Chr8:50883938-50883957 MsG0880044883.01.T01:intron 40.0%
TTGTGACTTCGGAGAGTTTA+TGG + Chr8:50887585-50887604 None:intergenic 40.0%
! AAACCATTTTGCCGAACGAA+TGG - Chr8:50885539-50885558 MsG0880044883.01.T01:CDS 40.0%
! AAAGTACCAGTAGCTATCCA+TGG + Chr8:50886554-50886573 None:intergenic 40.0%
! ACTGCCTGGATATCTTTTTC+CGG - Chr8:50886617-50886636 MsG0880044883.01.T01:intron 40.0%
! AGATGAGGATGAAAAGGTGT+TGG - Chr8:50884012-50884031 MsG0880044883.01.T01:intron 40.0%
! AGCTCGATTCTTTGTTGCTT+TGG - Chr8:50885614-50885633 MsG0880044883.01.T01:intron 40.0%
! AGGGTTGAAGGTAGTTGATA+AGG - Chr8:50884060-50884079 MsG0880044883.01.T01:CDS 40.0%
! CAGTTTATGATGGAGCTTCA+AGG - Chr8:50884040-50884059 MsG0880044883.01.T01:intron 40.0%
! CATGTAAAAGCATGGAAGGA+AGG - Chr8:50885737-50885756 MsG0880044883.01.T01:CDS 40.0%
! GCAATTTTCACAGGCTATCA+TGG - Chr8:50887506-50887525 MsG0880044883.01.T01:CDS 40.0%
! GGAAATCCCATATGATTTGG+CGG - Chr8:50886638-50886657 MsG0880044883.01.T01:intron 40.0%
! TTTTTGGACCTTCATGTCCA+TGG - Chr8:50884914-50884933 MsG0880044883.01.T01:intron 40.0%
!! GTTGAAGGTAGTTGATAAGG+AGG - Chr8:50884063-50884082 MsG0880044883.01.T01:CDS 40.0%
!! GTTGGTGTCACAGTTTATGA+TGG - Chr8:50884030-50884049 MsG0880044883.01.T01:intron 40.0%
!!! GAAGCTTTTGGTGTTTACCA+AGG - Chr8:50883620-50883639 MsG0880044883.01.T01:intron 40.0%
AACTTTGCCAGAGTCCTTAG+AGG - Chr8:50886478-50886497 MsG0880044883.01.T01:intron 45.0%
ACAGTGAACTCCCACAATAC+AGG + Chr8:50884948-50884967 None:intergenic 45.0%
AGCTACTGGTACTTTGAGCA+TGG - Chr8:50886559-50886578 MsG0880044883.01.T01:intron 45.0%
ATAACCTGGACCATTGGCAT+AGG + Chr8:50887222-50887241 None:intergenic 45.0%
ATAGGTGGAGCTTTCCATTG+AGG + Chr8:50885474-50885493 None:intergenic 45.0%
ATTGGCAGAAGCCTCTACAT+TGG - Chr8:50886067-50886086 MsG0880044883.01.T01:intron 45.0%
ATTGTACGTACCGTGCGATA+GGG + Chr8:50885264-50885283 None:intergenic 45.0%
CAGTATCCATGCATCACGAA+AGG + Chr8:50887380-50887399 None:intergenic 45.0%
CATTAACTCTCAGGAATGGG+CGG - Chr8:50887181-50887200 MsG0880044883.01.T01:CDS 45.0%
CGGTATCTGGGTCTGAATTA+AGG - Chr8:50883873-50883892 MsG0880044883.01.T01:intron 45.0%
CTACAGTCTTCACCACAACA+AGG + Chr8:50885839-50885858 None:intergenic 45.0%
CTTTGACCATGGATAGCTAC+TGG - Chr8:50886545-50886564 MsG0880044883.01.T01:intron 45.0%
GAAATGGGCAGTCACATATG+AGG - Chr8:50886126-50886145 MsG0880044883.01.T01:CDS 45.0%
GAGTATCCTACCTATGCCAA+TGG - Chr8:50887209-50887228 MsG0880044883.01.T01:CDS 45.0%
GCTGAATATGGGGTGAGTAA+TGG - Chr8:50885864-50885883 MsG0880044883.01.T01:CDS 45.0%
GGAAGGTTACCATGTTAGTG+TGG - Chr8:50885215-50885234 MsG0880044883.01.T01:CDS 45.0%
GGCATTCGATTTCGGTATCT+GGG - Chr8:50883861-50883880 MsG0880044883.01.T01:intron 45.0%
GGGTTAAAGGGAAGAGAATG+TGG - Chr8:50883774-50883793 MsG0880044883.01.T01:intron 45.0%
GGTGAGACTGTTTGTGACTT+CGG + Chr8:50887596-50887615 None:intergenic 45.0%
GGTGGTTACCTAGACTGATA+GGG - Chr8:50885112-50885131 MsG0880044883.01.T01:intron 45.0%
GGTTACCATGTTAGTGTGGA+CGG - Chr8:50885219-50885238 MsG0880044883.01.T01:CDS 45.0%
GGTTCTTCACTTAGGTGTGA+GGG - Chr8:50884181-50884200 MsG0880044883.01.T01:intron 45.0%
GTATCCATGCATCACGAAAG+GGG + Chr8:50887378-50887397 None:intergenic 45.0%
GTGGGACAAATTGCAACACA+AGG - Chr8:50887886-50887905 MsG0880044883.01.T01:CDS 45.0%
TAGCCACTCAGAAGAGTCTA+AGG - Chr8:50885083-50885102 MsG0880044883.01.T01:intron 45.0%
TAGCTGTGCACAATCTCAAC+TGG + Chr8:50887791-50887810 None:intergenic 45.0%
TAGGTGGAGCTTTCCATTGA+GGG + Chr8:50885473-50885492 None:intergenic 45.0%
TGCAATGGGGTTCTTCACTT+AGG - Chr8:50884173-50884192 MsG0880044883.01.T01:intron 45.0%
TGCCAATTTGGGTGCATTGA+AGG - Chr8:50887818-50887837 MsG0880044883.01.T01:CDS 45.0%
TGCTTACATATGAGACCGGA+GGG - Chr8:50886322-50886341 MsG0880044883.01.T01:intron 45.0%
TGGTGGTTACCTAGACTGAT+AGG - Chr8:50885111-50885130 MsG0880044883.01.T01:intron 45.0%
TGTATTGTGGGAGTTCACTG+TGG - Chr8:50884947-50884966 MsG0880044883.01.T01:intron 45.0%
TTCTCAGGGATTCTCTCTTG+AGG - Chr8:50885338-50885357 MsG0880044883.01.T01:CDS 45.0%
TTGCCTTAGACTCTTCTGAG+TGG + Chr8:50885089-50885108 None:intergenic 45.0%
TTGCTTACATATGAGACCGG+AGG - Chr8:50886321-50886340 MsG0880044883.01.T01:intron 45.0%
TTTGTTCTCACCTTAACCGC+TGG - Chr8:50885189-50885208 MsG0880044883.01.T01:intron 45.0%
! AAGAGTCTAAGGCAACATGG+TGG - Chr8:50885094-50885113 MsG0880044883.01.T01:intron 45.0%
! AATACTTGGTGACTACTGCC+TGG - Chr8:50886603-50886622 MsG0880044883.01.T01:intron 45.0%
! AGAGAACAGAAAGCACAAGC+AGG + Chr8:50887343-50887362 None:intergenic 45.0%
! AGTTCACTGTGGTCTTACTG+CGG - Chr8:50884958-50884977 MsG0880044883.01.T01:intron 45.0%
! CAGAAGAGTCTAAGGCAACA+TGG - Chr8:50885091-50885110 MsG0880044883.01.T01:intron 45.0%
! CAGTAAACCTCTAAGGACTC+TGG + Chr8:50886488-50886507 None:intergenic 45.0%
! GAGAACAGAAAGCACAAGCA+GGG + Chr8:50887342-50887361 None:intergenic 45.0%
! TACCTCTTTTCCCTATCGCA+CGG - Chr8:50885251-50885270 MsG0880044883.01.T01:CDS 45.0%
! TCTAGGGCTGATGAAGATAC+TGG - Chr8:50884211-50884230 MsG0880044883.01.T01:intron 45.0%
! TGGCCATACCCTTTTACAGA+GGG - Chr8:50885159-50885178 MsG0880044883.01.T01:intron 45.0%
! TGTTTTCGCCCTATCAGTCT+AGG + Chr8:50885123-50885142 None:intergenic 45.0%
! TTCCTTGTGGGTTGACTTTG+TGG - Chr8:50883918-50883937 MsG0880044883.01.T01:intron 45.0%
! TTCGTGTCGGCATTCGATTT+CGG - Chr8:50883853-50883872 MsG0880044883.01.T01:intron 45.0%
! TTGGCCATACCCTTTTACAG+AGG - Chr8:50885158-50885177 MsG0880044883.01.T01:intron 45.0%
! TTTTCCCCTTTCGTGATGCA+TGG - Chr8:50887371-50887390 MsG0880044883.01.T01:CDS 45.0%
!! TTGTTGACTTGGGCTCTGTT+TGG - Chr8:50884285-50884304 MsG0880044883.01.T01:intron 45.0%
ACCATACTCCCCTTCGACAT+GGG - Chr8:50886104-50886123 MsG0880044883.01.T01:CDS 50.0%
AGAAATCTGAGGGCAGATGG+AGG + Chr8:50885917-50885936 None:intergenic 50.0%
AGCAGAAATCTGAGGGCAGA+TGG + Chr8:50885920-50885939 None:intergenic 50.0%
AGGATGTGAGCATGGGAATG+TGG - Chr8:50887741-50887760 MsG0880044883.01.T01:CDS 50.0%
ATGGTAACCTTCCAAGCCAG+CGG + Chr8:50885208-50885227 None:intergenic 50.0%
CGGCATTCGATTTCGGTATC+TGG - Chr8:50883860-50883879 MsG0880044883.01.T01:intron 50.0%
CTGAGTGGCTATCATCATCG+CGG + Chr8:50885074-50885093 None:intergenic 50.0%
CTGCCATTCGTTCGGCAAAA+TGG + Chr8:50885545-50885564 None:intergenic 50.0%
CTGCCCTCTGTAAAAGGGTA+TGG + Chr8:50885165-50885184 None:intergenic 50.0%
CTGGTCCATGTTTGACGTCA+AGG - Chr8:50886451-50886470 MsG0880044883.01.T01:intron 50.0%
CTTCACTTAGGTGTGAGGGA+TGG - Chr8:50884185-50884204 MsG0880044883.01.T01:intron 50.0%
GACCACAAAGTCAACCCACA+AGG + Chr8:50883923-50883942 None:intergenic 50.0%
GATGGAGCTTCAAGGGTTGA+AGG - Chr8:50884048-50884067 MsG0880044883.01.T01:intron 50.0%
GATTGTACGTACCGTGCGAT+AGG + Chr8:50885265-50885284 None:intergenic 50.0%
GCTTTCCGTCCACACTAACA+TGG + Chr8:50885227-50885246 None:intergenic 50.0%
GGATGTGAGCATGGGAATGT+GGG - Chr8:50887742-50887761 MsG0880044883.01.T01:CDS 50.0%
GGGTTCTTCACTTAGGTGTG+AGG - Chr8:50884180-50884199 MsG0880044883.01.T01:intron 50.0%
GTGTGAGGGATGGAAGTCTA+GGG - Chr8:50884195-50884214 MsG0880044883.01.T01:intron 50.0%
TACCGTGCGATAGGGAAAAG+AGG + Chr8:50885256-50885275 None:intergenic 50.0%
TAGCAGACTTAGGATCCGTC+TGG + Chr8:50887639-50887658 None:intergenic 50.0%
TCCCCTTCGACATGGGAAAT+GGG - Chr8:50886111-50886130 MsG0880044883.01.T01:CDS 50.0%
TGCATCTGTGGCGCAAAACT+TGG + Chr8:50885438-50885457 None:intergenic 50.0%
TGCCCATTTCCCATGTCGAA+GGG + Chr8:50886116-50886135 None:intergenic 50.0%
TTCTCTCTTGAGGACGCTAC+AGG - Chr8:50885348-50885367 MsG0880044883.01.T01:CDS 50.0%
ACCTTCCAAGCCAGCGGTTA+AGG + Chr8:50885202-50885221 None:intergenic 55.0%
CACCATACTCCCCTTCGACA+TGG - Chr8:50886103-50886122 MsG0880044883.01.T01:CDS 55.0%
CCTACCTATGCCAATGGTCC+AGG - Chr8:50887215-50887234 MsG0880044883.01.T01:CDS 55.0%
CCTGGACCATTGGCATAGGT+AGG + Chr8:50887218-50887237 None:intergenic 55.0%
CTCCCCTTCGACATGGGAAA+TGG - Chr8:50886110-50886129 MsG0880044883.01.T01:CDS 55.0%
CTGCCCATTTCCCATGTCGA+AGG + Chr8:50886117-50886136 None:intergenic 55.0%
GCCCATTTCCCATGTCGAAG+GGG + Chr8:50886115-50886134 None:intergenic 55.0%
GGTCTTACTGCGGCCATCTA+AGG - Chr8:50884968-50884987 MsG0880044883.01.T01:intron 55.0%
GGTGTGAGGGATGGAAGTCT+AGG - Chr8:50884194-50884213 MsG0880044883.01.T01:intron 55.0%
TCCCATGTCGAAGGGGAGTA+TGG + Chr8:50886108-50886127 None:intergenic 55.0%
TCCTCCCAATGAGCCAATCG+CGG + Chr8:50883968-50883987 None:intergenic 55.0%
! CAGAAAGCACAAGCAGGGAC+TGG + Chr8:50887337-50887356 None:intergenic 55.0%
! CATGTCGAAGGGGAGTATGG+TGG + Chr8:50886105-50886124 None:intergenic 55.0%
! TCTCACCTTAACCGCTGGCT+TGG - Chr8:50885194-50885213 MsG0880044883.01.T01:intron 55.0%
!! ACCTTAACCGCTGGCTTGGA+AGG - Chr8:50885198-50885217 MsG0880044883.01.T01:intron 55.0%
TGTTGTTGGGACGCCGCGAT+TGG - Chr8:50883952-50883971 MsG0880044883.01.T01:intron 60.0%
! GACGCCGCGATTGGCTCATT+GGG - Chr8:50883961-50883980 MsG0880044883.01.T01:intron 60.0%
! GCCGCGATTGGCTCATTGGG+AGG - Chr8:50883964-50883983 MsG0880044883.01.T01:intron 65.0%
! GGACGCCGCGATTGGCTCAT+TGG - Chr8:50883960-50883979 MsG0880044883.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 50883419 50887937 50883419 ID=MsG0880044883.01;Name=MsG0880044883.01
Chr8 mRNA 50883419 50887937 50883419 ID=MsG0880044883.01.T01;Parent=MsG0880044883.01;Name=MsG0880044883.01.T01;_AED=0.36;_eAED=0.37;_QI=0|0|0|1|1|1|7|0|652
Chr8 exon 50887124 50887937 50887124 ID=MsG0880044883.01.T01:exon:21563;Parent=MsG0880044883.01.T01
Chr8 exon 50886084 50886316 50886084 ID=MsG0880044883.01.T01:exon:21562;Parent=MsG0880044883.01.T01
Chr8 exon 50885721 50886011 50885721 ID=MsG0880044883.01.T01:exon:21561;Parent=MsG0880044883.01.T01
Chr8 exon 50885481 50885609 50885481 ID=MsG0880044883.01.T01:exon:21560;Parent=MsG0880044883.01.T01
Chr8 exon 50885209 50885382 50885209 ID=MsG0880044883.01.T01:exon:21559;Parent=MsG0880044883.01.T01
Chr8 exon 50884055 50884162 50884055 ID=MsG0880044883.01.T01:exon:21558;Parent=MsG0880044883.01.T01
Chr8 exon 50883419 50883628 50883419 ID=MsG0880044883.01.T01:exon:21557;Parent=MsG0880044883.01.T01
Chr8 CDS 50887124 50887937 50887124 ID=MsG0880044883.01.T01:cds;Parent=MsG0880044883.01.T01
Chr8 CDS 50886084 50886316 50886084 ID=MsG0880044883.01.T01:cds;Parent=MsG0880044883.01.T01
Chr8 CDS 50885721 50886011 50885721 ID=MsG0880044883.01.T01:cds;Parent=MsG0880044883.01.T01
Chr8 CDS 50885481 50885609 50885481 ID=MsG0880044883.01.T01:cds;Parent=MsG0880044883.01.T01
Chr8 CDS 50885209 50885382 50885209 ID=MsG0880044883.01.T01:cds;Parent=MsG0880044883.01.T01
Chr8 CDS 50884055 50884162 50884055 ID=MsG0880044883.01.T01:cds;Parent=MsG0880044883.01.T01
Chr8 CDS 50883419 50883628 50883419 ID=MsG0880044883.01.T01:cds;Parent=MsG0880044883.01.T01
Gene Sequence

>MsG0880044883.01.T01

ATGAAGAAAATGAAACTAAACCCATTTTCACTCTTTCCAAATAGACCTAAACTTCTTCATATTTTCATGGTTCTTATGCTTTTTTATTTGCTCTTTACAACCTTTGAAATCAAAACTTTTGAGTTTGTTTCAGTTTCTTCTGTGCTTGTGAATGAAAACCAAAACACCCATCATAGAAAAGCTTTGAACTTTCCTTCAGAAGAAGCTTTTGGTGTTTACCAAGGTTCATTACACAGAAAACCAATGCAAGAGATGCAGAAAGTTTCCACCTTGAATTTCAATGAAGGTGATTTGAATGAATCTGATTTAGAAAAAGACAAATTTTCTGAGATTCAAAAGGCTGTTAAGGTTGCTTGGGTTAAAGGGAAGAGAATGTGGGATGAAATTCAGTTTCAGAGTGTTGAAACTGTGAATGTTGCTGAGAATATTTCTGATTCGTGTCGGCATTCGATTTCGGTATCTGGGTCTGAATTAAGGAACCAGAAAGGGATTATGATGATTCCTTGTGGGTTGACTTTGTGGTCTCATGTTACTGTTGTTGGGACGCCGCGATTGGCTCATTGGGAGGATGATCCTAAGATAACTATTGTGAAAGATGAGGATGAAAAGGTGTTGGTGTCACAGTTTATGATGGAGCTTCAAGGGTTGAAGGTAGTTGATAAGGAGGAACCACCTAAGATACTGCATTTTAATCCTAGGTTGAAAGGCGATTATAGTGGGAAGCCTGTGATTGAGCAGAATACTTGTTATAGGATGCAATGGGGTTCTTCACTTAGGTGTGAGGGATGGAAGTCTAGGGCTGATGAAGATACTGTTGATGGACAGTTGAAATGTGAAAAGTGGATCCGCGATGATGATAGCCACTCAGAAGAGTCTAAGGCAACATGGTGGTTACCTAGACTGATAGGGCGAAAACACAAGATCACTTTCGATTGGCCATACCCTTTTACAGAGGGCAGATTATTTGTTCTCACCTTAACCGCTGGCTTGGAAGGTTACCATGTTAGTGTGGACGGAAAGCATGTTACCTCTTTTCCCTATCGCACGGGATTCTCTCTTGAGGACGCTACAGGTCTATCTATAAAAGGGGATATTGACGTGCACTCTATATATGCTGCTTCATTACCAACATCACATCCAAGTTTTGCGCCACAGATGCATCTTGAATTGCTCCCTCAATGGAAAGCTCCACCTATTCTCGATGTAAATGTGGAGCTTTTCATTGGAATACTTTCTGCTGGAAACCATTTTGCCGAACGAATGGCAGTAAGAAAATCGTGGATGCAACATAAGCTAATCAAATCTTCACATGTCGTAGCTCGATTCTTTGTTGCTTTGCATGGAAGGAAGGATATAAATTTGGACATAAAGAAAGAAGCAGATTATTTTGGTGATATTATTATAGTTCCATATATGGATCATTATGACCTTGTTGTGGTGAAGACTGTAGCTATTGCTGAATATGGGATTCGTACCGTAGCTGCTAAGAATATCATGAAATGTGATGATGACACGTTTGTTCGATTGGATTCTATCATCAGTGAAGTAGGAAAAGTAGGAATTGGCAGAAGCCTCTACATTGGCAATATGAATTACCACCATACTCCCCTTCGACATGGGAAATGGGCAGTCACATATGAGGAATGGGCGGAAGAAGAGTATCCTACCTATGCCAATGGTCCAGGTTATATAATCTCATCAGACATTGCTCAGTTCATTGTATCGAACTTTGAGGAGCACAAATTAAAATTATTTAAAATGGAGGATGTGAGCATGGGAATGTGGGTAGAGCAATTCAAGAGTTCACGACCAGTTGAGATTGTGCACAGCTACAAGTTCTGCCAATTTGGGTGCATTGAAGGTTACTACACTGCACATTACCAATCTCCAAGACAAATGACATGTATGTGGGACAAATTGCAACACAAGGGAAAACCACTATGTTGCAATAACAGATGA
Protein sequence

>MsG0880044883.01.T01

MKKMKLNPFSLFPNRPKLLHIFMVLMLFYLLFTTFEIKTFEFVSVSSVLVNENQNTHHRKALNFPSEEAFGVYQGSLHRKPMQEMQKVSTLNFNEGDLNESDLEKDKFSEIQKAVKVAWVKGKRMWDEIQFQSVETVNVAENISDSCRHSISVSGSELRNQKGIMMIPCGLTLWSHVTVVGTPRLAHWEDDPKITIVKDEDEKVLVSQFMMELQGLKVVDKEEPPKILHFNPRLKGDYSGKPVIEQNTCYRMQWGSSLRCEGWKSRADEDTVDGQLKCEKWIRDDDSHSEESKATWWLPRLIGRKHKITFDWPYPFTEGRLFVLTLTAGLEGYHVSVDGKHVTSFPYRTGFSLEDATGLSIKGDIDVHSIYAASLPTSHPSFAPQMHLELLPQWKAPPILDVNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSHVVARFFVALHGRKDINLDIKKEADYFGDIIIVPYMDHYDLVVVKTVAIAEYGIRTVAAKNIMKCDDDTFVRLDSIISEVGKVGIGRSLYIGNMNYHHTPLRHGKWAVTYEEWAEEEYPTYANGPGYIISSDIAQFIVSNFEEHKLKLFKMEDVSMGMWVEQFKSSRPVEIVHSYKFCQFGCIEGYYTAHYQSPRQMTCMWDKLQHKGKPLCCNNR*