AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020377.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020377.01.T01 MTR_4g049650 67.552 339 56 5 7 307 1 323 7.40e-151 429
MsG0480020377.01.T01 MTR_8g088840 56.977 344 86 4 6 307 2 325 2.98e-117 346
MsG0480020377.01.T01 MTR_8g088840 56.977 344 86 4 6 307 2 325 6.16e-117 345
MsG0480020377.01.T01 MTR_8g088800 51.299 308 93 5 36 307 7 293 1.31e-84 261
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020377.01.T01 AT1G61000 37.135 342 160 6 7 311 1 324 3.11e-60 199

Find 90 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCGGTTATAGTTGAAAT+TGG 0.215264 4:-40097879 MsG0480020377.01.T01:intron
TCCTTTGTGAAGACCTATTT+AGG 0.240548 4:-40094279 MsG0480020377.01.T02:intron
GATTTGGATTCTGTTTAATA+TGG 0.242009 4:-40094466 MsG0480020377.01.T01:three_prime_UTR
GTAGAATGAAGTTGGGTTTA+GGG 0.249189 4:+40098698 None:intergenic
TGTAGAATGAAGTTGGGTTT+AGG 0.251830 4:+40098697 None:intergenic
TTCAATTGATTTAGCAGAAT+TGG 0.262392 4:+40095676 None:intergenic
ACGACATCTGTTTGTTGTTC+AGG 0.273092 4:+40097762 None:intergenic
ACTTTGCCTTTCAACCAATT+TGG 0.281351 4:+40095597 None:intergenic
TGAGGTAATTCTACTATTTA+CGG 0.282447 4:+40094943 None:intergenic
AAAATCCTGGTATGAATCAT+AGG 0.283285 4:-40094406 MsG0480020377.01.T01:three_prime_UTR
TGGGTTTAGGGTTGGAGATT+TGG 0.284553 4:+40098710 None:intergenic
TCATCGGACCGAGTTCTTCT+TGG 0.291248 4:-40098459 MsG0480020377.01.T01:CDS
TGAAACATTCATAATTATTT+CGG 0.292573 4:+40098390 None:intergenic
CAAGTTAAACGTATATTCTT+AGG 0.297277 4:+40098505 None:intergenic
CTATCGCTAACCATCTTTCT+TGG 0.314510 4:+40093377 None:intergenic
ATCTGTTTGTTGTTCAGGTT+TGG 0.317109 4:+40097767 None:intergenic
GAAAATACCTGTACTTTATC+AGG 0.318832 4:+40097151 None:intergenic
TTATTATACACCTTGATAAC+AGG 0.327760 4:+40098559 None:intergenic
AGAGAATGAATGCAGTATTA+AGG 0.330702 4:-40095198 MsG0480020377.01.T01:three_prime_UTR
AAAGGCTAGATTTGACGATT+TGG 0.333650 4:-40094482 MsG0480020377.01.T01:three_prime_UTR
AAGGGAGACGCCATTTGTTC+AGG 0.348144 4:-40097828 MsG0480020377.01.T01:CDS
GAAAGAGTCCGACCATTAAA+AGG 0.359751 4:-40094500 MsG0480020377.01.T01:three_prime_UTR
TCCCTCCTCAGTTGAGCATA+TGG 0.362858 4:-40095239 MsG0480020377.01.T01:intron
TAATTATGAATGTTTCAAAA+AGG 0.376300 4:-40098384 MsG0480020377.01.T01:CDS
GTAGAGATGTAGAATGAAGT+TGG 0.383940 4:+40098690 None:intergenic
TAATTATGCTAATCTTGAAA+TGG 0.391260 4:+40093453 None:intergenic
TTGATCAGTTAGATAGTAAA+GGG 0.407525 4:-40094896 MsG0480020377.01.T01:three_prime_UTR
TTCTCAATTTCTGTCTCGAC+AGG 0.407777 4:-40098431 MsG0480020377.01.T01:CDS
ACAGAAGATAGTGGAGATTG+AGG 0.409206 4:-40097990 MsG0480020377.01.T01:CDS
CTCCCTTTCTCTCGCTTCAA+AGG 0.411261 4:+40097844 None:intergenic
AATGAAGTTGGGTTTAGGGT+TGG 0.427243 4:+40098702 None:intergenic
TGCATTGCTGCAGTTTCATA+AGG 0.428210 4:-40094559 MsG0480020377.01.T01:intron
AACTCGGTCCGATGAGGATC+AGG 0.431370 4:+40098467 None:intergenic
GAAGTCACTTGAGGCCAAAT+TGG 0.431505 4:-40095611 MsG0480020377.01.T01:exon
GCATCCACCTCCTGAACAAA+TGG 0.450315 4:+40097818 None:intergenic
GTTGATCAGTTAGATAGTAA+AGG 0.452629 4:-40094897 MsG0480020377.01.T01:three_prime_UTR
GAAAGAGAAGAATGTGGAAA+TGG 0.452886 4:-40097717 MsG0480020377.01.T01:CDS
TAGAGATGTAGAATGAAGTT+GGG 0.453848 4:+40098691 None:intergenic
CGACAGGTTCGTTTCTTCGT+AGG 0.454779 4:-40098415 MsG0480020377.01.T01:CDS
ACTGATCCAACGTGAAGATC+AGG 0.458161 4:+40098583 None:intergenic
TTCTGCTAAATCAATTGAAA+AGG 0.460788 4:-40095672 MsG0480020377.01.T01:CDS
CTAAGAATATACGTTTAACT+TGG 0.465252 4:-40098504 MsG0480020377.01.T01:CDS
AATCCTTTGAAGCGAGAGAA+AGG 0.467209 4:-40097847 MsG0480020377.01.T01:CDS
AGTGCAGGCTATACAAGAAC+AGG 0.481548 4:-40095989 MsG0480020377.01.T01:intron
CATGCAGTCTTCTTCTTCCA+AGG 0.483711 4:+40098816 None:intergenic
GTAGAAAATCAAGGTGGTTG+AGG 0.484407 4:+40098659 None:intergenic
TGGATCAGTTCCTGTTATCA+AGG 0.493142 4:-40098569 MsG0480020377.01.T01:CDS
AAGCTAAAGTTGGTGAAAGC+TGG 0.494852 4:-40095635 MsG0480020377.01.T01:CDS
TAAAGCATTAAAGCTAAAGT+TGG 0.500002 4:-40095645 MsG0480020377.01.T01:CDS
GACGCCATTTGTTCAGGAGG+TGG 0.502875 4:-40097822 MsG0480020377.01.T01:CDS
ATCCTTTGAAGCGAGAGAAA+GGG 0.510341 4:-40097846 MsG0480020377.01.T01:CDS
TTGAGGCCAAATTGGTTGAA+AGG 0.513337 4:-40095603 MsG0480020377.01.T01:exon
CAAGGTGTATAATAAGATCA+AGG 0.525310 4:-40098551 MsG0480020377.01.T01:CDS
TGTAGACGAATTCAACGCCT+TGG 0.530335 4:-40098014 MsG0480020377.01.T01:intron
CGCCTTGGAACAGAAGATAG+TGG 0.533911 4:-40097999 MsG0480020377.01.T01:CDS
GAATGTGGAAATGGATGAAA+AGG 0.535763 4:-40097708 MsG0480020377.01.T01:intron
TGAATGCAGTATTAAGGCAG+AGG 0.536347 4:-40095192 MsG0480020377.01.T01:three_prime_UTR
AAATCCTGGTATGAATCATA+GGG 0.542081 4:-40094405 MsG0480020377.01.T01:three_prime_UTR
ACACGCGATCATCAAAATCC+TGG 0.544081 4:-40094419 MsG0480020377.01.T01:three_prime_UTR
GGAGATTTGGTGATCAGTGA+CGG 0.548351 4:+40098723 None:intergenic
CTTCGTCAAGTAGAAAATCA+AGG 0.550421 4:+40098650 None:intergenic
ATATATATAGCTGTTATGCT+TGG 0.553477 4:-40094336 MsG0480020377.01.T01:three_prime_UTR
CTCCACTATCTTCTGTTCCA+AGG 0.557457 4:+40097997 None:intergenic
AGGGATAGAGTTAGTCGAAG+AGG 0.559903 4:-40094877 MsG0480020377.01.T01:intron
TCCTCAGTTGAGCATATGGA+AGG 0.561194 4:-40095235 MsG0480020377.01.T01:intron
AAAGCACAACAAGCAAGTGC+AGG 0.563007 4:-40096004 MsG0480020377.01.T01:CDS
TTGTTAAACCTGATCCTCAT+CGG 0.564123 4:-40098475 MsG0480020377.01.T01:CDS
ATTTCTGATCGACCGAGACG+TGG 0.565080 4:+40098778 None:intergenic
TTTCAATTTCGAATTGAGAG+AGG 0.577197 4:+40098746 None:intergenic
ATGCAGTCTTCTTCTTCCAA+GGG 0.578364 4:+40098817 None:intergenic
TTGGTTGAAAGGCAAAGTAA+AGG 0.579751 4:-40095592 MsG0480020377.01.T01:intron
TCAATCACCTGATAAAGTAC+AGG 0.585250 4:-40097158 MsG0480020377.01.T01:intron
TCGTACGTGTGATTGAGTCT+TGG 0.585700 4:-40094524 MsG0480020377.01.T01:three_prime_UTR
TGCAGTATTAAGGCAGAGGA+AGG 0.590937 4:-40095188 MsG0480020377.01.T01:three_prime_UTR
ATTGCTACTACCAAGAAAGA+TGG 0.591006 4:-40093387 None:intergenic
GGAGACGCCATTTGTTCAGG+AGG 0.601708 4:-40097825 MsG0480020377.01.T01:CDS
TGCTGATGCTGTGTTATCAA+AGG 0.607629 4:-40095093 MsG0480020377.01.T01:intron
GAAAATCCTGATCTTCACGT+TGG 0.615576 4:-40098589 MsG0480020377.01.T01:CDS
TGAGGAGAATAAGATTACAC+AGG 0.627026 4:-40097972 MsG0480020377.01.T01:intron
ATTGCCCTATGATTCATACC+AGG 0.631220 4:+40094401 None:intergenic
TTTCTGATCGACCGAGACGT+GGG 0.634497 4:+40098779 None:intergenic
AATTACATCTGTCTTAACAA+AGG 0.634686 4:+40094371 None:intergenic
AAATTTGAAAGAGAAGAATG+TGG 0.635335 4:-40097723 MsG0480020377.01.T01:CDS
AACTACGAATACCCACGTCT+CGG 0.646779 4:-40098790 MsG0480020377.01.T01:CDS
AAGAAGAACTCGGTCCGATG+AGG 0.652446 4:+40098461 None:intergenic
GAAGAGCACCAAGAAGAACT+CGG 0.655537 4:+40098451 None:intergenic
CCTCAGTTGAGCATATGGAA+GGG 0.659483 4:-40095234 MsG0480020377.01.T01:intron
AAAGCTGGTGAAGTCACTTG+AGG 0.663431 4:-40095620 MsG0480020377.01.T01:exon
TCCTAAATAGGTCTTCACAA+AGG 0.668024 4:+40094278 None:intergenic
CGTCAAGTAGAAAATCAAGG+TGG 0.740056 4:+40098653 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATTAAAACAAAATGAT+AGG + Chr4:40098274-40098293 None:intergenic 10.0%
!!! AAAATATTCTTTTTGTATTT+TGG - Chr4:40096343-40096362 MsG0480020377.01.T01:intron 10.0%
!!! ATTAATTTTATGATGAAAAA+TGG - Chr4:40095410-40095429 MsG0480020377.01.T01:intron 10.0%
!!! TTATATTAGAACTTTTAATA+TGG + Chr4:40098173-40098192 None:intergenic 10.0%
!!! TTTTATTTCTTCTTAAAAAT+TGG + Chr4:40098447-40098466 None:intergenic 10.0%
!! AAAAAAAAAGGTAAAATCTA+TGG + Chr4:40097504-40097523 None:intergenic 15.0%
!! AAAAAAAAGGTAAAATCTAT+GGG + Chr4:40097503-40097522 None:intergenic 15.0%
!! AAAAATAAAATCACTCTAAA+TGG + Chr4:40098055-40098074 None:intergenic 15.0%
!! AATCATTTCATTTATATCAA+TGG + Chr4:40095929-40095948 None:intergenic 15.0%
!! ATATAAATCGTAAAATAACA+TGG + Chr4:40096872-40096891 None:intergenic 15.0%
!! GAGATGATTAATAATTAATT+TGG + Chr4:40098301-40098320 None:intergenic 15.0%
!! TAATATAAAGATCAATTTGA+CGG - Chr4:40093942-40093961 MsG0480020377.01.T02:intron 15.0%
!! TAATTATGAATGTTTCAAAA+AGG - Chr4:40093818-40093837 MsG0480020377.01.T02:intron 15.0%
!! TATTATTGTAATTTACATTC+TGG + Chr4:40096072-40096091 None:intergenic 15.0%
!! TGAAACATTCATAATTATTT+CGG + Chr4:40093815-40093834 None:intergenic 15.0%
!! TTCAATATATATTATGAGTA+GGG - Chr4:40098202-40098221 MsG0480020377.01.T01:intron 15.0%
!!! AATTTTGTGGTTTTTATTTT+AGG - Chr4:40098697-40098716 MsG0480020377.01.T01:CDS 15.0%
!!! ATTTTGTGGTTTTTATTTTA+GGG - Chr4:40098698-40098717 MsG0480020377.01.T01:CDS 15.0%
!!! TTTATATTTTTCTTGTTTCT+TGG - Chr4:40098001-40098020 MsG0480020377.01.T01:CDS 15.0%
!!! TTTTGAAATTTTATTGTCTT+AGG - Chr4:40093984-40094003 MsG0480020377.01.T02:intron 15.0%
!!! TTTTTTGAAACAAATAGAAT+AGG + Chr4:40095137-40095156 None:intergenic 15.0%
!! ATAATATTATCTGTATCTCA+TGG - Chr4:40096086-40096105 MsG0480020377.01.T01:intron 20.0%
!! ATATTGTATTTGCATTTCAT+TGG - Chr4:40095252-40095271 MsG0480020377.01.T01:intron 20.0%
!! ATGAGAAACAGTAAAAAAAA+AGG + Chr4:40097516-40097535 None:intergenic 20.0%
!! CAACAATAGAAATAGTTTAA+CGG + Chr4:40094155-40094174 None:intergenic 20.0%
!! CTTCAATATATATTATGAGT+AGG - Chr4:40098201-40098220 MsG0480020377.01.T01:intron 20.0%
!! TAATATTATCTGTATCTCAT+GGG - Chr4:40096087-40096106 MsG0480020377.01.T01:intron 20.0%
!! TAATTATGCTAATCTTGAAA+TGG + Chr4:40098752-40098771 None:intergenic 20.0%
!! TATTTCTTCTTAAAAATTGG+AGG + Chr4:40098444-40098463 None:intergenic 20.0%
!! TTAACAACTTACTATCATTT+CGG + Chr4:40093925-40093944 None:intergenic 20.0%
!! TTCAATTCTATGAATATGAT+AGG + Chr4:40095168-40095187 None:intergenic 20.0%
!! TTTATGTGAATCATTTATGT+TGG - Chr4:40094738-40094757 MsG0480020377.01.T01:intron 20.0%
!!! AAATATACCATATTTTGGAA+TGG + Chr4:40095816-40095835 None:intergenic 20.0%
!!! AATAGATTTTCTTTTAGACA+AGG + Chr4:40096826-40096845 None:intergenic 20.0%
!!! AATTTTATGATGAAAAATGG+CGG - Chr4:40095413-40095432 MsG0480020377.01.T01:intron 20.0%
!!! GATGAAATTTTTGAATTTTG+TGG - Chr4:40098684-40098703 MsG0480020377.01.T01:CDS 20.0%
!!! GTTCTAAATATACCATATTT+TGG + Chr4:40095821-40095840 None:intergenic 20.0%
!!! TTCATTGATTGATTTTCATT+CGG - Chr4:40094307-40094326 MsG0480020377.01.T01:three_prime_UTR 20.0%
!!! TTTATTTTAGGGAAAAGTAT+AGG - Chr4:40098709-40098728 MsG0480020377.01.T01:CDS 20.0%
!!! TTTTGGTAATGAATTTTTCT+CGG - Chr4:40096302-40096321 MsG0480020377.01.T01:intron 20.0%
!!! TTTTGTATTTTGGATTTGAA+TGG - Chr4:40096353-40096372 MsG0480020377.01.T01:intron 20.0%
!!! TTTTTTTTTAAATATCGACG+AGG - Chr4:40095871-40095890 MsG0480020377.01.T01:intron 20.0%
! AAATTTGAAAGAGAAGAATG+TGG - Chr4:40094479-40094498 MsG0480020377.01.T01:three_prime_UTR 25.0%
! AATCATCATGGTAAATAAAG+GGG + Chr4:40096278-40096297 None:intergenic 25.0%
! AATCTTACTTCTTAATGTTG+TGG - Chr4:40094594-40094613 MsG0480020377.01.T01:intron 25.0%
! AATGCAAATACAATATTCAC+AGG + Chr4:40095248-40095267 None:intergenic 25.0%
! AATTACATCTGTCTTAACAA+AGG + Chr4:40097834-40097853 None:intergenic 25.0%
! AATTATACTAATTCCTGTTC+TGG - Chr4:40094888-40094907 MsG0480020377.01.T01:three_prime_UTR 25.0%
! ATATATATAGCTGTTATGCT+TGG - Chr4:40097866-40097885 MsG0480020377.01.T01:CDS 25.0%
! ATATTCAGTATCAGAAATCT+GGG + Chr4:40094974-40094993 None:intergenic 25.0%
! ATTTATTTAGCACTTCCTAT+AGG - Chr4:40096503-40096522 MsG0480020377.01.T01:intron 25.0%
! CAAAATGATAGGTTAAGATT+TGG + Chr4:40098263-40098282 None:intergenic 25.0%
! CAAGTTAAACGTATATTCTT+AGG + Chr4:40093700-40093719 None:intergenic 25.0%
! CAATCATCATGGTAAATAAA+GGG + Chr4:40096279-40096298 None:intergenic 25.0%
! CTAAGAATATACGTTTAACT+TGG - Chr4:40093698-40093717 MsG0480020377.01.T02:intron 25.0%
! CTTATAAAAAACTTCCATGT+TGG - Chr4:40095104-40095123 MsG0480020377.01.T01:three_prime_UTR 25.0%
! GATTTGGATTCTGTTTAATA+TGG - Chr4:40097736-40097755 MsG0480020377.01.T01:CDS 25.0%
! GCAAGAAAAATATCCTAAAT+AGG + Chr4:40097939-40097958 None:intergenic 25.0%
! GGAATATGATAGATTCTTAT+TGG - Chr4:40094120-40094139 MsG0480020377.01.T02:intron 25.0%
! GTAAGTCAATAACTTACTTT+CGG + Chr4:40098239-40098258 None:intergenic 25.0%
! GTTAACTAAGCTTTCATTAT+TGG + Chr4:40094562-40094581 None:intergenic 25.0%
! GTTTACAATGCATGATTAAA+CGG - Chr4:40094098-40094117 MsG0480020377.01.T02:intron 25.0%
! TAAAGTGGTCTATATTATCT+AGG + Chr4:40096146-40096165 None:intergenic 25.0%
! TAAGGAAAGCAAACTTAAAT+AGG + Chr4:40095645-40095664 None:intergenic 25.0%
! TATAGAGAAATACAATGACT+TGG - Chr4:40098550-40098569 MsG0480020377.01.T01:CDS 25.0%
! TATATTCAGTATCAGAAATC+TGG + Chr4:40094975-40094994 None:intergenic 25.0%
! TATTAACCTATGCATACTAT+CGG + Chr4:40098607-40098626 None:intergenic 25.0%
! TCTATAAAGCAGATTTGTAA+AGG + Chr4:40095954-40095973 None:intergenic 25.0%
! TGAATCATTTATGTTGGATT+AGG - Chr4:40094744-40094763 MsG0480020377.01.T01:intron 25.0%
! TGAGGTAATTCTACTATTTA+CGG + Chr4:40097262-40097281 None:intergenic 25.0%
! TGCACAATAAGTATCTTTAA+AGG + Chr4:40096463-40096482 None:intergenic 25.0%
! TGCTAAATAAATCAAACAAG+AGG + Chr4:40096495-40096514 None:intergenic 25.0%
! TTCTGCTAAATCAATTGAAA+AGG - Chr4:40096530-40096549 MsG0480020377.01.T01:intron 25.0%
! TTGATCAGTTAGATAGTAAA+GGG - Chr4:40097306-40097325 MsG0480020377.01.T01:intron 25.0%
! TTTACAATGCATGATTAAAC+GGG - Chr4:40094099-40094118 MsG0480020377.01.T02:intron 25.0%
!! AGTAATGTTTTCTGTAGTTA+TGG + Chr4:40097163-40097182 None:intergenic 25.0%
!! ATTTTCTTGTATACCTGAAA+AGG + Chr4:40096175-40096194 None:intergenic 25.0%
!! CTAATTGTAGACAATTTTTG+TGG - Chr4:40098777-40098796 MsG0480020377.01.T01:CDS 25.0%
!! TAAAGCATTAAAGCTAAAGT+TGG - Chr4:40096557-40096576 MsG0480020377.01.T01:intron 25.0%
!! TTATTATACACCTTGATAAC+AGG + Chr4:40093646-40093665 None:intergenic 25.0%
!! TTCAATTGATTTAGCAGAAT+TGG + Chr4:40096529-40096548 None:intergenic 25.0%
!! TTGCATTCTTTTGAACATTT+TGG + Chr4:40095005-40095024 None:intergenic 25.0%
!! TTGTGGTTTTTGAATAGTTA+TGG - Chr4:40094611-40094630 MsG0480020377.01.T01:intron 25.0%
!!! TAGATTATTTTACTTGTCGA+CGG - Chr4:40094921-40094940 MsG0480020377.01.T01:three_prime_UTR 25.0%
!!! TTATTTTGTCTATAATCGTC+AGG - Chr4:40097230-40097249 MsG0480020377.01.T01:intron 25.0%
!!! TTCCTTATTTTGCATAAAGA+GGG - Chr4:40095658-40095677 MsG0480020377.01.T01:CDS 25.0%
!!! TTTCCTTATTTTGCATAAAG+AGG - Chr4:40095657-40095676 MsG0480020377.01.T01:CDS 25.0%
AAAACAAGCACCAATAACTT+GGG - Chr4:40098573-40098592 MsG0480020377.01.T01:CDS 30.0%
AAAATCCTGGTATGAATCAT+AGG - Chr4:40097796-40097815 MsG0480020377.01.T01:CDS 30.0%
AAATCCTGGTATGAATCATA+GGG - Chr4:40097797-40097816 MsG0480020377.01.T01:CDS 30.0%
AAGCAAACTTAAATAGGTAG+AGG + Chr4:40095639-40095658 None:intergenic 30.0%
AGAGAATGAATGCAGTATTA+AGG - Chr4:40097004-40097023 MsG0480020377.01.T01:intron 30.0%
AGTTTAACTGATGTCCAATA+AGG - Chr4:40094044-40094063 MsG0480020377.01.T02:intron 30.0%
ATACAGTAAAAAATCAGAGG+TGG - Chr4:40097049-40097068 MsG0480020377.01.T01:intron 30.0%
ATTAACCTATGCATACTATC+GGG + Chr4:40098606-40098625 None:intergenic 30.0%
ATTTGACGGTTAAATAGTGT+CGG - Chr4:40093956-40093975 MsG0480020377.01.T02:intron 30.0%
ATTTGTATGTGTGATGGTAT+TGG - Chr4:40094281-40094300 MsG0480020377.01.T01:three_prime_UTR 30.0%
CAAGGTGTATAATAAGATCA+AGG - Chr4:40093651-40093670 MsG0480020377.01.T02:intron 30.0%
CATTCGGTTATAGTTGAAAT+TGG - Chr4:40094323-40094342 MsG0480020377.01.T01:three_prime_UTR 30.0%
CCTATACAGTAAAAAATCAG+AGG - Chr4:40097046-40097065 MsG0480020377.01.T01:intron 30.0%
CTGAAAAGGAATTGATAAAG+TGG + Chr4:40096161-40096180 None:intergenic 30.0%
GAAAATACCTGTACTTTATC+AGG + Chr4:40095054-40095073 None:intergenic 30.0%
GATAGATTCTTATTGGATGA+CGG - Chr4:40094127-40094146 MsG0480020377.01.T02:intron 30.0%
GCAATCATCATGGTAAATAA+AGG + Chr4:40096280-40096299 None:intergenic 30.0%
GGTCAAAGCATATTAAGATT+TGG + Chr4:40094541-40094560 None:intergenic 30.0%
GTAGATGCATACATATATAC+AGG - Chr4:40094645-40094664 MsG0480020377.01.T01:intron 30.0%
GTTATCACAGTGTAAAACAT+TGG - Chr4:40095297-40095316 MsG0480020377.01.T01:intron 30.0%
GTTGATCAGTTAGATAGTAA+AGG - Chr4:40097305-40097324 MsG0480020377.01.T01:intron 30.0%
TAACTTACTTTCGGAGTTAA+CGG + Chr4:40098230-40098249 None:intergenic 30.0%
TACCAAAATTGCAATCATCA+TGG + Chr4:40096290-40096309 None:intergenic 30.0%
TAGAGATGTAGAATGAAGTT+GGG + Chr4:40093514-40093533 None:intergenic 30.0%
TATTACAGGCTGCTATTATA+TGG - Chr4:40094801-40094820 MsG0480020377.01.T01:intron 30.0%
TATTCAGTATCAGAAATCTG+GGG + Chr4:40094973-40094992 None:intergenic 30.0%
TCAATAACCCAATTGTTATG+TGG - Chr4:40098634-40098653 MsG0480020377.01.T01:CDS 30.0%
TCTTCAATTTGTATGTGTGA+TGG - Chr4:40094275-40094294 MsG0480020377.01.T02:intron 30.0%
TGTGGCTATTTATCTTCTTA+TGG - Chr4:40097350-40097369 MsG0480020377.01.T01:intron 30.0%
TTTACGTGAACAATTCAACT+GGG - Chr4:40094668-40094687 MsG0480020377.01.T01:intron 30.0%
TTTCAATTTCGAATTGAGAG+AGG + Chr4:40093459-40093478 None:intergenic 30.0%
! AAAGGAAGAAAAAGTACACA+AGG + Chr4:40096445-40096464 None:intergenic 30.0%
! CACTTTATCAATTCCTTTTC+AGG - Chr4:40096159-40096178 MsG0480020377.01.T01:intron 30.0%
! GAGACTAAATTGATAGTAAG+TGG - Chr4:40093886-40093905 MsG0480020377.01.T02:intron 30.0%
! GATTTAGGACATTGAAACTT+TGG - Chr4:40094696-40094715 MsG0480020377.01.T01:intron 30.0%
! GTAACTTGCACATATATTAC+AGG - Chr4:40094787-40094806 MsG0480020377.01.T01:intron 30.0%
! TACCATGATGATTGCAATTT+TGG - Chr4:40096285-40096304 MsG0480020377.01.T01:intron 30.0%
! TTTCTTTTCTACCCATCATT+AGG - Chr4:40098347-40098366 MsG0480020377.01.T01:intron 30.0%
!! AAATCTAGCCTTTTAATGGT+CGG + Chr4:40097713-40097732 None:intergenic 30.0%
!! AATCAATCCTGTGTTGTTTA+CGG + Chr4:40098117-40098136 None:intergenic 30.0%
!! AATGATGGGTAGAAAAGAAA+AGG + Chr4:40098347-40098366 None:intergenic 30.0%
!! ATGATGGGTAGAAAAGAAAA+GGG + Chr4:40098346-40098365 None:intergenic 30.0%
!! ATTAACAGTGTTGATGCTTT+AGG - Chr4:40097963-40097982 MsG0480020377.01.T01:intron 30.0%
!! TTCTTGGTTTCACTTTTACT+TGG - Chr4:40098017-40098036 MsG0480020377.01.T01:intron 30.0%
!! TTGAAACTTTGGATTAGTAG+AGG - Chr4:40094707-40094726 MsG0480020377.01.T01:intron 30.0%
!!! ATACCATATTTTGGAATGGA+GGG + Chr4:40095812-40095831 None:intergenic 30.0%
!!! CCTCTGATTTTTTACTGTAT+AGG + Chr4:40097049-40097068 None:intergenic 30.0%
!!! TATACCATATTTTGGAATGG+AGG + Chr4:40095813-40095832 None:intergenic 30.0%
AAAATATCATGCCACAATGC+AGG + Chr4:40096747-40096766 None:intergenic 35.0%
AAACAAGCACCAATAACTTG+GGG - Chr4:40098574-40098593 MsG0480020377.01.T01:CDS 35.0%
AAAGGCTAGATTTGACGATT+TGG - Chr4:40097720-40097739 MsG0480020377.01.T01:CDS 35.0%
ACTTTGCCTTTCAACCAATT+TGG + Chr4:40096608-40096627 None:intergenic 35.0%
AGCCCTCTTTATGCAAAATA+AGG + Chr4:40095663-40095682 None:intergenic 35.0%
ATACAATATTCACAGGCAGA+TGG + Chr4:40095241-40095260 None:intergenic 35.0%
ATGGTTGTCCACATAACAAT+TGG + Chr4:40098645-40098664 None:intergenic 35.0%
ATTTGAATGGAGTTCATGAC+AGG - Chr4:40096366-40096385 MsG0480020377.01.T01:intron 35.0%
CATGTGAGGAAAATGAAAAG+TGG - Chr4:40097431-40097450 MsG0480020377.01.T01:intron 35.0%
CTAATTCCTGTTCTGGTATT+TGG - Chr4:40094895-40094914 MsG0480020377.01.T01:three_prime_UTR 35.0%
CTATAACCAAATACCAGAAC+AGG + Chr4:40094904-40094923 None:intergenic 35.0%
CTTCGTCAAGTAGAAAATCA+AGG + Chr4:40093555-40093574 None:intergenic 35.0%
GAAAACAAGCACCAATAACT+TGG - Chr4:40098572-40098591 MsG0480020377.01.T01:CDS 35.0%
GAAAGAGAAGAATGTGGAAA+TGG - Chr4:40094485-40094504 MsG0480020377.01.T01:three_prime_UTR 35.0%
GAATAGGCTAATAACCAACA+TGG + Chr4:40095121-40095140 None:intergenic 35.0%
GAATGTGGAAATGGATGAAA+AGG - Chr4:40094494-40094513 MsG0480020377.01.T01:three_prime_UTR 35.0%
GGTCAAATAACTAGAAGACA+GGG + Chr4:40096243-40096262 None:intergenic 35.0%
GTAGAATGAAGTTGGGTTTA+GGG + Chr4:40093507-40093526 None:intergenic 35.0%
GTAGAGATGTAGAATGAAGT+TGG + Chr4:40093515-40093534 None:intergenic 35.0%
GTTTACGTGAACAATTCAAC+TGG - Chr4:40094667-40094686 MsG0480020377.01.T01:intron 35.0%
TAACTGATGTCCAATAAGGA+TGG - Chr4:40094048-40094067 MsG0480020377.01.T02:intron 35.0%
TAATACACCGTAAACAACAC+AGG - Chr4:40098107-40098126 MsG0480020377.01.T01:intron 35.0%
TAATTGGCGGAATGAAAGAA+GGG + Chr4:40098373-40098392 None:intergenic 35.0%
TACAATATTCACAGGCAGAT+GGG + Chr4:40095240-40095259 None:intergenic 35.0%
TCAATCACCTGATAAAGTAC+AGG - Chr4:40095044-40095063 MsG0480020377.01.T01:intron 35.0%
TCCAATAAGGATGGAGAATT+CGG - Chr4:40094057-40094076 MsG0480020377.01.T02:intron 35.0%
TCCTAAATAGGTCTTCACAA+AGG + Chr4:40097927-40097946 None:intergenic 35.0%
TCCTTTGTGAAGACCTATTT+AGG - Chr4:40097923-40097942 MsG0480020377.01.T01:intron 35.0%
TGAACAATTCAACTGGGATT+AGG - Chr4:40094674-40094693 MsG0480020377.01.T01:intron 35.0%
TGAGGAGAATAAGATTACAC+AGG - Chr4:40094230-40094249 MsG0480020377.01.T02:intron 35.0%
TGCTATATAGCACTGTTCTT+TGG - Chr4:40096904-40096923 MsG0480020377.01.T01:intron 35.0%
TGGTTGTCCACATAACAATT+GGG + Chr4:40098644-40098663 None:intergenic 35.0%
TGTAGAATGAAGTTGGGTTT+AGG + Chr4:40093508-40093527 None:intergenic 35.0%
TTCAACTGGGATTAGGATTT+AGG - Chr4:40094681-40094700 MsG0480020377.01.T01:intron 35.0%
TTGGTTGAAAGGCAAAGTAA+AGG - Chr4:40096610-40096629 MsG0480020377.01.T01:intron 35.0%
TTGTTAAACCTGATCCTCAT+CGG - Chr4:40093727-40093746 MsG0480020377.01.T02:intron 35.0%
TTTATGATGAAAAATGGCGG+TGG - Chr4:40095416-40095435 MsG0480020377.01.T01:intron 35.0%
! ATTTAGCAGAATTGGCCTAT+AGG + Chr4:40096521-40096540 None:intergenic 35.0%
! CTTTTCATTTTCCTCACATG+AGG + Chr4:40097431-40097450 None:intergenic 35.0%
! TTTGTAAGGTGCTCTCAAAT+AGG + Chr4:40094011-40094030 None:intergenic 35.0%
! TTTTACTGAATGTCCAGTGA+GGG - Chr4:40095374-40095393 MsG0480020377.01.T01:intron 35.0%
! TTTTCTCGGTATATCGAAGA+AGG - Chr4:40096316-40096335 MsG0480020377.01.T01:intron 35.0%
! TTTTTACTGAATGTCCAGTG+AGG - Chr4:40095373-40095392 MsG0480020377.01.T01:intron 35.0%
!! ATCTGTTTGTTGTTCAGGTT+TGG + Chr4:40094438-40094457 None:intergenic 35.0%
!! ATTTGAGAGCACCTTACAAA+GGG - Chr4:40094011-40094030 MsG0480020377.01.T02:intron 35.0%
!! CGTCAAATCTAGCCTTTTAA+TGG + Chr4:40097717-40097736 None:intergenic 35.0%
!! TACATTCTGGAATGAGCAAA+TGG + Chr4:40096059-40096078 None:intergenic 35.0%
!! TATTTGAGAGCACCTTACAA+AGG - Chr4:40094010-40094029 MsG0480020377.01.T02:intron 35.0%
AAAGAAATTAGCTCGAGACG+TGG - Chr4:40095691-40095710 MsG0480020377.01.T01:intron 40.0%
AAGCATCTGTGTCTAATTGG+CGG + Chr4:40098386-40098405 None:intergenic 40.0%
ACCGAATTCTCCATCCTTAT+TGG + Chr4:40094061-40094080 None:intergenic 40.0%
ACTCCCTCCATTCCAAAATA+TGG - Chr4:40095806-40095825 MsG0480020377.01.T01:intron 40.0%
ATGAAAGAAGGGCCTAATGA+TGG + Chr4:40098362-40098381 None:intergenic 40.0%
ATTGCCCTATGATTCATACC+AGG + Chr4:40097804-40097823 None:intergenic 40.0%
CGTCAAGTAGAAAATCAAGG+TGG + Chr4:40093552-40093571 None:intergenic 40.0%
CTAATTGGCGGAATGAAAGA+AGG + Chr4:40098374-40098393 None:intergenic 40.0%
CTTCTCATGGAAATTGTGCA+TGG + Chr4:40095738-40095757 None:intergenic 40.0%
CTTGGAAAAAACATCGACGA+GGG + Chr4:40095765-40095784 None:intergenic 40.0%
CTTGTGTAAGCAAGCAATGT+TGG - Chr4:40096639-40096658 MsG0480020377.01.T01:intron 40.0%
GAAAATCCTGATCTTCACGT+TGG - Chr4:40093613-40093632 MsG0480020377.01.T02:intron 40.0%
GAAAGAGTCCGACCATTAAA+AGG - Chr4:40097702-40097721 MsG0480020377.01.T01:intron 40.0%
GGGTCAAATAACTAGAAGAC+AGG + Chr4:40096244-40096263 None:intergenic 40.0%
GTAGAAAATCAAGGTGGTTG+AGG + Chr4:40093546-40093565 None:intergenic 40.0%
GTGCAAGTTACACAAACTAG+AGG + Chr4:40094778-40094797 None:intergenic 40.0%
TAGTGAATGTCCCCTTTGTA+AGG + Chr4:40094025-40094044 None:intergenic 40.0%
TATCAGCACGAGTTTACCAA+CGG + Chr4:40098509-40098528 None:intergenic 40.0%
TGAAAGAAGGGCCTAATGAT+GGG + Chr4:40098361-40098380 None:intergenic 40.0%
TGAATGCAGTATTAAGGCAG+AGG - Chr4:40097010-40097029 MsG0480020377.01.T01:intron 40.0%
TGCATTGCTGCAGTTTCATA+AGG - Chr4:40097643-40097662 MsG0480020377.01.T01:intron 40.0%
TGCTGATGCTGTGTTATCAA+AGG - Chr4:40097109-40097128 MsG0480020377.01.T01:intron 40.0%
TGGATCAGTTCCTGTTATCA+AGG - Chr4:40093633-40093652 MsG0480020377.01.T02:intron 40.0%
TTCCAAGGTTTGTGATCACA+GGG - Chr4:40095778-40095797 MsG0480020377.01.T01:intron 40.0%
TTCGCAAATTACCTGCATTG+TGG - Chr4:40096733-40096752 MsG0480020377.01.T01:intron 40.0%
TTCTCAATTTCTGTCTCGAC+AGG - Chr4:40093771-40093790 MsG0480020377.01.T02:intron 40.0%
TTGAGGCCAAATTGGTTGAA+AGG - Chr4:40096599-40096618 MsG0480020377.01.T01:intron 40.0%
TTTCCAAGGTTTGTGATCAC+AGG - Chr4:40095777-40095796 MsG0480020377.01.T01:intron 40.0%
! AATGAAGTTGGGTTTAGGGT+TGG + Chr4:40093503-40093522 None:intergenic 40.0%
! CATTTTCCTCACATGAGGTA+CGG + Chr4:40097426-40097445 None:intergenic 40.0%
! CTGAAGCATCTGTGTCTAAT+TGG + Chr4:40098389-40098408 None:intergenic 40.0%
! CTGTTGCAGATTCTTTTCTG+AGG + Chr4:40097280-40097299 None:intergenic 40.0%
! TTGCATAAAGAGGGCTTTAG+AGG - Chr4:40095667-40095686 MsG0480020377.01.T01:CDS 40.0%
!! AAGCTAAAGTTGGTGAAAGC+TGG - Chr4:40096567-40096586 MsG0480020377.01.T01:intron 40.0%
!! AATCCTTTGAAGCGAGAGAA+AGG - Chr4:40094355-40094374 MsG0480020377.01.T01:three_prime_UTR 40.0%
!! ACAGAAGATAGTGGAGATTG+AGG - Chr4:40094212-40094231 MsG0480020377.01.T02:intron 40.0%
!! ACGACATCTGTTTGTTGTTC+AGG + Chr4:40094443-40094462 None:intergenic 40.0%
!! ATCCTTTGAAGCGAGAGAAA+GGG - Chr4:40094356-40094375 MsG0480020377.01.T01:three_prime_UTR 40.0%
!! CCATGTAGAGTGTCATTTGA+GGG - Chr4:40097564-40097583 MsG0480020377.01.T01:intron 40.0%
!! TTTGAGAGCACCTTACAAAG+GGG - Chr4:40094012-40094031 MsG0480020377.01.T02:intron 40.0%
AAAGCACAACAAGCAAGTGC+AGG - Chr4:40096198-40096217 MsG0480020377.01.T01:intron 45.0%
AAAGCTGGTGAAGTCACTTG+AGG - Chr4:40096582-40096601 MsG0480020377.01.T01:intron 45.0%
AACTACGAATACCCACGTCT+CGG - Chr4:40093412-40093431 MsG0480020377.01.T02:CDS 45.0%
ACACGCGATCATCAAAATCC+TGG - Chr4:40097783-40097802 MsG0480020377.01.T01:CDS 45.0%
ACTGATCCAACGTGAAGATC+AGG + Chr4:40093622-40093641 None:intergenic 45.0%
AGGGATAGAGTTAGTCGAAG+AGG - Chr4:40097325-40097344 MsG0480020377.01.T01:intron 45.0%
AGTGCAGGCTATACAAGAAC+AGG - Chr4:40096213-40096232 MsG0480020377.01.T01:intron 45.0%
ATCCCTGTGATCACAAACCT+TGG + Chr4:40095783-40095802 None:intergenic 45.0%
CATGGTAAATAAAGGGGCAG+TGG + Chr4:40096272-40096291 None:intergenic 45.0%
CCCTCAAATGACACTCTACA+TGG + Chr4:40097567-40097586 None:intergenic 45.0%
CCTCAGTTGAGCATATGGAA+GGG - Chr4:40096968-40096987 MsG0480020377.01.T01:intron 45.0%
CCTTGGAAAAAACATCGACG+AGG + Chr4:40095766-40095785 None:intergenic 45.0%
CTCCACTATCTTCTGTTCCA+AGG + Chr4:40094208-40094227 None:intergenic 45.0%
GAAGTCACTTGAGGCCAAAT+TGG - Chr4:40096591-40096610 MsG0480020377.01.T01:intron 45.0%
GCACGGCATTCATTTGGAAA+TGG + Chr4:40096669-40096688 None:intergenic 45.0%
GGAGTTCATGACAGGAATGA+TGG - Chr4:40096374-40096393 MsG0480020377.01.T01:intron 45.0%
TCCATATGCTCAACTGAGGA+GGG + Chr4:40096967-40096986 None:intergenic 45.0%
TCCTCAGTTGAGCATATGGA+AGG - Chr4:40096967-40096986 MsG0480020377.01.T01:intron 45.0%
TCGTACGTGTGATTGAGTCT+TGG - Chr4:40097678-40097697 MsG0480020377.01.T01:intron 45.0%
TGCAGTATTAAGGCAGAGGA+AGG - Chr4:40097014-40097033 MsG0480020377.01.T01:intron 45.0%
TGTAGACGAATTCAACGCCT+TGG - Chr4:40094188-40094207 MsG0480020377.01.T02:intron 45.0%
TTCATCAATTCAGCCCTCAC+TGG + Chr4:40095390-40095409 None:intergenic 45.0%
TTCCATATGCTCAACTGAGG+AGG + Chr4:40096968-40096987 None:intergenic 45.0%
! GAGTTAGTCGAAGAGGTATG+TGG - Chr4:40097332-40097351 MsG0480020377.01.T01:intron 45.0%
! TGGGTTTAGGGTTGGAGATT+TGG + Chr4:40093495-40093514 None:intergenic 45.0%
!! GAAGAGCACCAAGAAGAACT+CGG + Chr4:40093754-40093773 None:intergenic 45.0%
!! GCCATGTAGAGTGTCATTTG+AGG - Chr4:40097563-40097582 MsG0480020377.01.T01:intron 45.0%
!! GGAGATTTGGTGATCAGTGA+CGG + Chr4:40093482-40093501 None:intergenic 45.0%
!!! CCTCGTCGATGTTTTTTCCA+AGG - Chr4:40095763-40095782 MsG0480020377.01.T01:intron 45.0%
!! TATATTAAGAATATTATAAA+TGG + Chr4:40098664-40098683 None:intergenic 5.0%
AAGAAGAACTCGGTCCGATG+AGG + Chr4:40093744-40093763 None:intergenic 50.0%
AAGGGAGACGCCATTTGTTC+AGG - Chr4:40094374-40094393 MsG0480020377.01.T01:three_prime_UTR 50.0%
AATAAAGGGGCAGTGGAGCA+CGG + Chr4:40096265-40096284 None:intergenic 50.0%
ACATGGCAGTCTGGAGAACA+AGG + Chr4:40097550-40097569 None:intergenic 50.0%
ATTTCTGATCGACCGAGACG+TGG + Chr4:40093427-40093446 None:intergenic 50.0%
CCCTTCCATATGCTCAACTG+AGG + Chr4:40096971-40096990 None:intergenic 50.0%
CGACAGGTTCGTTTCTTCGT+AGG - Chr4:40093787-40093806 MsG0480020377.01.T02:intron 50.0%
CGCCTTGGAACAGAAGATAG+TGG - Chr4:40094203-40094222 MsG0480020377.01.T02:intron 50.0%
CTCCCTTTCTCTCGCTTCAA+AGG + Chr4:40094361-40094380 None:intergenic 50.0%
GCAAGCCCGATAGTATGCAT+AGG - Chr4:40098598-40098617 MsG0480020377.01.T01:CDS 50.0%
GCATCCACCTCCTGAACAAA+TGG + Chr4:40094387-40094406 None:intergenic 50.0%
GTGCTTGCACGGCATTCATT+TGG + Chr4:40096675-40096694 None:intergenic 50.0%
TACCATTACGCGTGCTTGCA+CGG + Chr4:40096686-40096705 None:intergenic 50.0%
TCATCGGACCGAGTTCTTCT+TGG - Chr4:40093743-40093762 MsG0480020377.01.T02:intron 50.0%
TCCCTCCTCAGTTGAGCATA+TGG - Chr4:40096963-40096982 MsG0480020377.01.T01:intron 50.0%
TCTCTTGTGCATACCTCCGT+TGG - Chr4:40098490-40098509 MsG0480020377.01.T01:CDS 50.0%
TGACACTCTACATGGCAGTC+TGG + Chr4:40097559-40097578 None:intergenic 50.0%
TTTCTGATCGACCGAGACGT+GGG + Chr4:40093426-40093445 None:intergenic 50.0%
AACTCGGTCCGATGAGGATC+AGG + Chr4:40093738-40093757 None:intergenic 55.0%
ATAAAGGGGCAGTGGAGCAC+GGG + Chr4:40096264-40096283 None:intergenic 55.0%
CAGCACGAGTTTACCAACGG+AGG + Chr4:40098506-40098525 None:intergenic 55.0%
GACGCCATTTGTTCAGGAGG+TGG - Chr4:40094380-40094399 MsG0480020377.01.T01:three_prime_UTR 55.0%
GGAGACGCCATTTGTTCAGG+AGG - Chr4:40094377-40094396 MsG0480020377.01.T01:three_prime_UTR 55.0%
TTGCAGCCGTACCTCATGTG+AGG - Chr4:40097417-40097436 MsG0480020377.01.T01:intron 55.0%
! GGGCTTGCTCCCCAAGTTAT+TGG + Chr4:40098586-40098605 None:intergenic 55.0%
!! CAGAAATCTGGGGTGTCGAG+AGG + Chr4:40094963-40094982 None:intergenic 55.0%
CGACGAGGGCAGTCTTCTCA+TGG + Chr4:40095751-40095770 None:intergenic 60.0%
TGCCGTGCAAGCACGCGTAA+TGG - Chr4:40096681-40096700 MsG0480020377.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 40093388 40098836 40093388 ID=MsG0480020377.01;Name=MsG0480020377.01
Chr4 mRNA 40094280 40098836 40094280 ID=MsG0480020377.01.T01;Parent=MsG0480020377.01;Name=MsG0480020377.01.T01;_AED=0.28;_eAED=0.29;_QI=0|0.5|0.44|1|0.5|0.55|9|570|314
Chr4 exon 40094280 40094568 40094280 ID=MsG0480020377.01.T01:exon:16826;Parent=MsG0480020377.01.T01
Chr4 exon 40094878 40094972 40094878 ID=MsG0480020377.01.T01:exon:16825;Parent=MsG0480020377.01.T01
Chr4 exon 40095094 40095250 40095094 ID=MsG0480020377.01.T01:exon:16824;Parent=MsG0480020377.01.T01
Chr4 exon 40095593 40095699 40095593 ID=MsG0480020377.01.T01:exon:16823;Parent=MsG0480020377.01.T01
Chr4 exon 40095990 40096043 40095990 ID=MsG0480020377.01.T01:exon:16822;Parent=MsG0480020377.01.T01
Chr4 exon 40097159 40097248 40097159 ID=MsG0480020377.01.T01:exon:16821;Parent=MsG0480020377.01.T01
Chr4 exon 40097709 40097888 40097709 ID=MsG0480020377.01.T01:exon:16820;Parent=MsG0480020377.01.T01
Chr4 exon 40097973 40098031 40097973 ID=MsG0480020377.01.T01:exon:16819;Parent=MsG0480020377.01.T01
Chr4 exon 40098353 40098836 40098353 ID=MsG0480020377.01.T01:exon:16818;Parent=MsG0480020377.01.T01
Chr4 CDS 40098353 40098836 40098353 ID=MsG0480020377.01.T01:cds;Parent=MsG0480020377.01.T01
Chr4 CDS 40097973 40098031 40097973 ID=MsG0480020377.01.T01:cds;Parent=MsG0480020377.01.T01
Chr4 CDS 40097709 40097888 40097709 ID=MsG0480020377.01.T01:cds;Parent=MsG0480020377.01.T01
Chr4 CDS 40097159 40097248 40097159 ID=MsG0480020377.01.T01:cds;Parent=MsG0480020377.01.T01
Chr4 CDS 40095990 40096043 40095990 ID=MsG0480020377.01.T01:cds;Parent=MsG0480020377.01.T01
Chr4 CDS 40095622 40095699 40095622 ID=MsG0480020377.01.T01:cds;Parent=MsG0480020377.01.T01
Chr4 three_prime_UTR 40095593 40095621 40095593 ID=MsG0480020377.01.T01:three_prime_utr;Parent=MsG0480020377.01.T01
Chr4 three_prime_UTR 40095094 40095250 40095094 ID=MsG0480020377.01.T01:three_prime_utr;Parent=MsG0480020377.01.T01
Chr4 three_prime_UTR 40094878 40094972 40094878 ID=MsG0480020377.01.T01:three_prime_utr;Parent=MsG0480020377.01.T01
Chr4 three_prime_UTR 40094280 40094568 40094280 ID=MsG0480020377.01.T01:three_prime_utr;Parent=MsG0480020377.01.T01
Chr4 mRNA 40093388 40094586 40093388 ID=MsG0480020377.01.T02;Parent=MsG0480020377.01;Name=MsG0480020377.01.T02;_AED=0.78;_eAED=0.83;_QI=0|0|0|0.5|0|0|2|0|76
Chr4 exon 40094477 40094586 40094477 ID=MsG0480020377.01.T02:exon:16828;Parent=MsG0480020377.01.T02
Chr4 exon 40093388 40093505 40093388 ID=MsG0480020377.01.T02:exon:16827;Parent=MsG0480020377.01.T02
Chr4 CDS 40094477 40094586 40094477 ID=MsG0480020377.01.T02:cds;Parent=MsG0480020377.01.T02
Chr4 CDS 40093388 40093505 40093388 ID=MsG0480020377.01.T02:cds;Parent=MsG0480020377.01.T02
Gene Sequence

>MsG0480020377.01.T01

TTGGAAGAAGAAGACTGCATGTCGAACTACGAATACCCACGTCTCGGTCGATCAGAAATAATCATAATCCTCTCTCAATTCGAAATTGAAACCGTCACTGATCACCAAATCTCCAACCCTAAACCCAACTTCATTCTACATCTCTACAACTGCATCCTCAACCACCTTGATTTTCTACTTGACGAAGACAATCGTCAACTTGATTTCGATGCAGTTGAGCATCTCGAAAATCCTGATCTTCACGTTGGATCAGTTCCTGTTATCAAGGTGTATAATAAGATCAAGGAAATGCTTAATGCTCTTGAATGTCCTAAGAATATACGTTTAACTTGGCTGATCTTGTTAAACCTGATCCTCATCGGACCGAGTTCTTCTTGGTGCTCTTCTCAATTTCTGTCTCGACAGGTTCGTTTCTTCGTAGGTTCCGAAATAATTATGAATGTTTCAAAAAGGTCTATGTCATTGTCGAATTTTACTCGTATTAACGAATTCAACGCCTTGGAACAGAAGATAGTGGAGATTGAGGAGAATAAGATTACACAGTTGAAATTGGCGATTGCTGAATCCTTTGAAGCGAGAGAAAGGGAGACGCCATTTGTTCAGGAGGTGGATGCAAAAGTTAATGAGCTGCGTCAAACTATTCCAAACCTGAACAACAAACAGATGTCGTTGAAGACTAGTTTAAAAAATTTGAAAGAGAAGAATGTGGAAATGGATGAAAAGATTTCTGATACTGAATATAAACTGATCCAAAATGTTCAAAAGAATGCAAATTTACGTTCGAAAATTGCTCAATCACCTGATAAAGTACAGGTATACAAGAAAATGTCAAAGCACAACAAGCAAGTGCAGGCTATACAAGAACAGGCCAATTCTGCTAAATCAATTGAAAAGGATCATAAAGCATTAAAGCTAAAGTTGGTGAAAGCTGGTGAAGTCACTTGA

>MsG0480020377.01.T02

ATGCTTGCATTGCTGCAGTTTCATAAGGATGCTAACTCGTTCGTACGTGTGATTGAGTCTTGGCGAAAGAGTCCGACCATTAAAAGGCTAGATTTGACGATTTGGATTCTGGAAAAGTATAGGAGTAAAGAGAAGTTTTTCCATTTCAAGATTAGCATAATTAAGTTTCTAATTGTAGACAATTTTTGTGGATCTACAAAATGCTCATTGCTACTACCAAGAAAGATG
Protein sequence

>MsG0480020377.01.T01

LEEEDCMSNYEYPRLGRSEIIIILSQFEIETVTDHQISNPKPNFILHLYNCILNHLDFLLDEDNRQLDFDAVEHLENPDLHVGSVPVIKVYNKIKEMLNALECPKNIRLTWLILLNLILIGPSSSWCSSQFLSRQVRFFVGSEIIMNVSKRSMSLSNFTRINEFNALEQKIVEIEENKITQLKLAIAESFEARERETPFVQEVDAKVNELRQTIPNLNNKQMSLKTSLKNLKEKNVEMDEKISDTEYKLIQNVQKNANLRSKIAQSPDKVQVYKKMSKHNKQVQAIQEQANSAKSIEKDHKALKLKLVKAGEVT*

>MsG0480020377.01.T02

MLALLQFHKDANSFVRVIESWRKSPTIKRLDLTIWILEKYRSKEKFFHFKISIIKFLIVDNFCGSTKCSLLLPRKM