AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020527.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020527.01.T01 MTR_4g052930 94.777 651 29 1 194 839 95 745 0.0 1225
MsG0480020527.01.T01 MTR_4g052930 95.489 133 6 0 1 133 1 133 6.40e-80 273
MsG0480020527.01.T01 MTR_1g112310 24.706 255 160 6 248 495 557 786 6.70e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020527.01.T01 AT2G27460 81.107 614 112 3 229 839 133 745 0.0 1013
MsG0480020527.01.T01 AT2G27460 68.421 133 40 1 1 133 1 131 1.67e-51 193
MsG0480020527.01.T01 AT3G07100 24.221 289 186 7 364 648 574 833 4.72e-16 83.6

Find 241 sgRNAs with CRISPR-Local

Find 624 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGCCTTTGTTACAGTTTC+TGG 0.014004 4:+42930063 MsG0480020527.01.T01:CDS
CTGCTAGGTGGGCGCGGTTT+TGG 0.122740 4:+42930310 MsG0480020527.01.T01:CDS
CATACATGCTTCTACAAATT+TGG 0.122798 4:+42936460 MsG0480020527.01.T01:three_prime_UTR
TGCAGCTTCCGAGGAGTTTC+TGG 0.146240 4:+42929783 MsG0480020527.01.T01:intron
GCGAAGCTTCCGGCCTATTA+TGG 0.173627 4:+42927765 MsG0480020527.01.T01:CDS
CCTCAGGAGCTTTCCAATTC+AGG 0.199227 4:+42933052 MsG0480020527.01.T01:CDS
TTGTCTGGTCCTCCTGATTA+TGG 0.212008 4:+42930526 MsG0480020527.01.T01:CDS
AGTTATCTTGGATCTGAATA+TGG 0.222003 4:+42930355 MsG0480020527.01.T01:CDS
AGGAAATAATACATACATTA+AGG 0.225439 4:+42936106 MsG0480020527.01.T01:three_prime_UTR
CATCATACAGTCCTAGTTTA+TGG 0.225820 4:-42929964 None:intergenic
CATAAAATAGAGATCCCTTT+TGG 0.233074 4:+42936051 MsG0480020527.01.T01:exon
AATACCAGATCTTTATAAAA+TGG 0.254969 4:-42930637 None:intergenic
GCAGGTTATACTTGCCTCTT+TGG 0.256095 4:+42934835 MsG0480020527.01.T01:intron
CTCCCGAACGATTTGTCATT+TGG 0.265725 4:+42928754 MsG0480020527.01.T01:CDS
CTCTTTGGAGGAAGGAGTTC+GGG 0.300375 4:+42934850 MsG0480020527.01.T01:CDS
CCTCTTTGGAGGAAGGAGTT+CGG 0.305917 4:+42934849 MsG0480020527.01.T01:CDS
TCTATCTTCAATGTCTGTTT+AGG 0.309830 4:+42935095 MsG0480020527.01.T01:CDS
ACATCGTCATTAAAATTTAC+AGG 0.312204 4:-42929151 None:intergenic
TACCCCGGTGCGAGAATTGC+TGG 0.312735 4:+42927864 MsG0480020527.01.T01:CDS
TTAAAATTTACAGGCCCATT+AGG 0.319278 4:-42929142 None:intergenic
AAATCCTTCCTCTCACAAAA+TGG 0.337457 4:-42936135 None:intergenic
ATTTACAGATACAGGAAAAT+AGG 0.337945 4:+42936086 MsG0480020527.01.T01:three_prime_UTR
AATGCACTTACCGAATTTCC+AGG 0.350578 4:-42931873 None:intergenic
AACCCTTTCTTCTATATGTA+TGG 0.352104 4:+42936298 MsG0480020527.01.T01:three_prime_UTR
AAGTGCATTGCTGGCAGCTT+TGG 0.354532 4:+42929816 MsG0480020527.01.T01:CDS
CGAAGCTTCCGGCCTATTAT+GGG 0.363168 4:+42927766 MsG0480020527.01.T01:CDS
TGTAGAGACCCCTCCTGAAT+TGG 0.364665 4:-42933065 None:intergenic
AATTAGTGGGAAAATAATAT+TGG 0.366366 4:+42936387 MsG0480020527.01.T01:three_prime_UTR
GTGCTAGATGCTAGTCCTAA+TGG 0.367130 4:+42929127 MsG0480020527.01.T01:CDS
AGAGTCTTTGCATTCTTGTC+TGG 0.368134 4:+42930511 MsG0480020527.01.T01:CDS
GAATCTCTCTGTAGTTATCT+TGG 0.372662 4:+42930343 MsG0480020527.01.T01:CDS
TGAATTTAAGCCTGGAAATT+CGG 0.375282 4:+42931863 MsG0480020527.01.T01:CDS
CGGCTGAACTCCGGATTACC+AGG 0.376922 4:-42928676 None:intergenic
CGAGGATATGCTTGTTTGTC+TGG 0.380876 4:-42935591 None:intergenic
ATTCCTTGTCAGGTTTGTTA+AGG 0.382445 4:+42935837 MsG0480020527.01.T01:intron
CTTTCACAGTTATATCTTCA+AGG 0.382548 4:-42936018 None:intergenic
TTATAAAATGGTGTCTGCTC+CGG 0.383227 4:-42930625 None:intergenic
TAACAGCAGTCATCAATATC+TGG 0.383962 4:-42936354 None:intergenic
CGACGGTTACTCCCCATAAT+AGG 0.386917 4:-42927778 None:intergenic
AACAAATGAGTACACTGATT+TGG 0.387569 4:+42930776 MsG0480020527.01.T01:CDS
GTTAATCCTATGTCAATTAG+TGG 0.390867 4:+42936373 MsG0480020527.01.T01:three_prime_UTR
TGCTAGATGCTAGTCCTAAT+GGG 0.392374 4:+42929128 MsG0480020527.01.T01:CDS
ATCTTCAAGCTCAGTTGATA+AGG 0.394715 4:-42930038 None:intergenic
TGGCTTGTTGGTGTAGGCTT+CGG 0.396430 4:+42928879 MsG0480020527.01.T01:CDS
CAATGTCAATTTACAGATAC+AGG 0.396454 4:+42936078 MsG0480020527.01.T01:three_prime_UTR
ACTCACTAAAAGTGCATTGC+TGG 0.397610 4:+42929807 MsG0480020527.01.T01:CDS
CCTCCGGTTCCCAGGGAAAA+GGG 0.397857 4:+42928651 MsG0480020527.01.T01:intron
TGAAGATAGATGCGATAATC+AGG 0.399902 4:-42935082 None:intergenic
ATTGAAGGTGGACACTTGTA+AGG 0.401391 4:+42930201 MsG0480020527.01.T01:intron
ATTGAAGAGCAGGACGTTGA+TGG 0.402336 4:+42935959 MsG0480020527.01.T01:CDS
AATTGTCCAGCTCCATAATC+AGG 0.403716 4:-42930538 None:intergenic
CTGAGTACTGGAATGCAATC+TGG 0.405541 4:-42933018 None:intergenic
GAAAAGGGGCCCTGGTAATC+CGG 0.406748 4:+42928666 MsG0480020527.01.T01:CDS
GAGTTAGACTCAGCTTGTTC+CGG 0.410599 4:-42927626 None:intergenic
CACTTAGACCAACAACTTCA+TGG 0.419630 4:+42930248 MsG0480020527.01.T01:CDS
AATTGACATTGCACCCCAAA+AGG 0.428351 4:-42936066 None:intergenic
GGAAATAATACATACATTAA+GGG 0.429204 4:+42936107 MsG0480020527.01.T01:three_prime_UTR
CAATTGGACACAAGACGATA+TGG 0.429414 4:+42930556 MsG0480020527.01.T01:CDS
TACACCAACAAGCCAACCCC+GGG 0.434226 4:-42928871 None:intergenic
CAATCATGGGGTGGTGGAAA+AGG 0.435450 4:-42935723 None:intergenic
CCACCAAATGACAAATCGTT+CGG 0.435647 4:-42928757 None:intergenic
CCCTCCGGTTCCCAGGGAAA+AGG 0.435881 4:+42928650 MsG0480020527.01.T01:intron
AGCAAAGATAGAACAACTTC+CGG 0.436514 4:-42934548 None:intergenic
TCAACCACAGCAACATAAAC+AGG 0.436590 4:-42928177 None:intergenic
CTTCTTCGCTTTCACGAAGA+AGG 0.436841 4:+42935052 MsG0480020527.01.T01:CDS
TGATTATGGAGCTGGACAAT+TGG 0.438986 4:+42930540 MsG0480020527.01.T01:CDS
GTGAGCAATATGCAAGCAAA+AGG 0.442646 4:+42930578 MsG0480020527.01.T01:CDS
CGGGGTTGGCTTGTTGGTGT+AGG 0.442900 4:+42928873 MsG0480020527.01.T01:CDS
ACATTGACTAGCACTTCAAA+AGG 0.444677 4:-42936240 None:intergenic
CGTGGGGTTGTTCTCTCTGC+GGG 0.448610 4:+42927924 MsG0480020527.01.T01:CDS
ACCTCAACTGAATTTAAGCC+TGG 0.449301 4:+42931855 MsG0480020527.01.T01:CDS
GATAAAGTGAAGAGATGGTT+TGG 0.454762 4:+42936436 MsG0480020527.01.T01:three_prime_UTR
TCGCGTGCGTCGGTGTCCGA+TGG 0.456538 4:-42927746 None:intergenic
CACCAAATGACAAATCGTTC+GGG 0.456687 4:-42928756 None:intergenic
TATAAAATGGTGTCTGCTCC+GGG 0.457228 4:-42930624 None:intergenic
TGCCATACATATAGAAGAAA+GGG 0.457721 4:-42936300 None:intergenic
GGTCCTCCTGATTATGGAGC+TGG 0.463244 4:+42930532 MsG0480020527.01.T01:CDS
CTCAAACCGTGTTCCTATCA+AGG 0.465708 4:+42928904 MsG0480020527.01.T01:CDS
AGGATCCGAACAGTGCAGTT+TGG 0.466995 4:+42934485 MsG0480020527.01.T01:CDS
GTTCTCTCCCATGAAGTTGT+TGG 0.470722 4:-42930256 None:intergenic
ACCGACGCACGCGAAGCTTC+CGG 0.472103 4:+42927755 MsG0480020527.01.T01:CDS
GTGGCATATGATGTCAATAC+TGG 0.472175 4:-42935567 None:intergenic
ATCAGTGTACTCATTTGTTA+CGG 0.472469 4:-42930772 None:intergenic
GAACTTTCTGATTGAAGAGC+AGG 0.474751 4:+42935949 MsG0480020527.01.T01:CDS
CGTCGGTGTCCGATGGGAAG+CGG 0.476085 4:-42927739 None:intergenic
CACAGTTATATCTTCAAGGA+AGG 0.476371 4:-42936014 None:intergenic
GAGCAAAGATTAGGCGTGGT+AGG 0.478898 4:-42935015 None:intergenic
TTAGAGAAGGCTTACAATCA+TGG 0.480179 4:-42935737 None:intergenic
TGGATCCGTATGCTGGTGAT+TGG 0.482715 4:-42927829 None:intergenic
GACTGTGGCCCTTACCGCCA+TGG 0.483040 4:-42927714 None:intergenic
CTCAGTTGTAGTTCCTCCTC+AGG 0.483102 4:+42933036 MsG0480020527.01.T01:CDS
TTGCCATACATATAGAAGAA+AGG 0.483322 4:-42936301 None:intergenic
CGTGTTCCTATCAAGGTCTC+AGG 0.483595 4:+42928911 MsG0480020527.01.T01:CDS
CGCCCAGCAATTCTCGCACC+GGG 0.486301 4:-42927867 None:intergenic
TCCATTCCTTGACCTGCTCC+CGG 0.486366 4:-42930280 None:intergenic
ATTCCCTTCAGCGGCGGCTA+AGG 0.486561 4:+42934465 MsG0480020527.01.T01:CDS
TAGAGAAGGCTTACAATCAT+GGG 0.487573 4:-42935736 None:intergenic
TTCCCAGGGAAAAGGGGCCC+TGG 0.490427 4:+42928658 MsG0480020527.01.T01:intron
CCGGGGTAAAAGCTCGCCGC+TGG 0.492821 4:-42927849 None:intergenic
ACCCCGGTGCGAGAATTGCT+GGG 0.492939 4:+42927865 MsG0480020527.01.T01:CDS
TTTGTAGAAGAAGAGTCGTC+TGG 0.494360 4:+42928132 MsG0480020527.01.T01:intron
CTTGATAGGAACACGGTTTG+AGG 0.496211 4:-42928903 None:intergenic
CTAGGACTGTATGATGTTCA+AGG 0.496397 4:+42929971 MsG0480020527.01.T01:CDS
CATTGACTAGCACTTCAAAA+GGG 0.496620 4:-42936239 None:intergenic
GCTGCTGTTGCTGTTCAAGC+AGG 0.496822 4:+42930729 MsG0480020527.01.T01:CDS
GGTGTTCTGCTAGGTGGGCG+CGG 0.497821 4:+42930304 MsG0480020527.01.T01:CDS
GTTATCTTGGATCTGAATAT+GGG 0.498278 4:+42930356 MsG0480020527.01.T01:CDS
CCTACTGTGAACTCGAACAA+TGG 0.498857 4:+42927900 MsG0480020527.01.T01:CDS
AACTTCATGGGAGAGAACTC+CGG 0.501996 4:+42930261 MsG0480020527.01.T01:CDS
CTTACCTTGCGGCTGAACTC+CGG 0.502825 4:-42928685 None:intergenic
CAACGCCAAACTGCACTGTT+CGG 0.504179 4:-42934490 None:intergenic
CGCGTGCGTCGGTGTCCGAT+GGG 0.504479 4:-42927745 None:intergenic
GTCGGTGTCCGATGGGAAGC+GGG 0.505218 4:-42927738 None:intergenic
CCGCTGAAGGGAATGATGCT+TGG 0.505435 4:-42934456 None:intergenic
CGTGGTAGGGGCTGCAGTTG+AGG 0.506057 4:-42935001 None:intergenic
TCTCTCTGCGGGAATCTCAA+TGG 0.506234 4:+42927935 MsG0480020527.01.T01:CDS
CGAGGATTCAACTTTGCCTC+AGG 0.506588 4:+42930857 MsG0480020527.01.T01:CDS
TCGCCGCTGGATCCGTATGC+TGG 0.507691 4:-42927836 None:intergenic
GGTTATACTTGCCTCTTTGG+AGG 0.509164 4:+42934838 MsG0480020527.01.T01:intron
GAGAACCCGAGTTCGATTCA+TGG 0.509498 4:-42928734 None:intergenic
AGCAAAGATTAGGCGTGGTA+GGG 0.511465 4:-42935014 None:intergenic
ATACTTGCCTCTTTGGAGGA+AGG 0.511857 4:+42934842 MsG0480020527.01.T01:CDS
GGATCCTTAGCCGCCGCTGA+AGG 0.513641 4:-42934469 None:intergenic
TGGGAGAGAACTCCGGGAGC+AGG 0.514819 4:+42930268 MsG0480020527.01.T01:CDS
GCCGGAAGCTTCGCGTGCGT+CGG 0.519321 4:-42927756 None:intergenic
TCTATCTTTGCTCGTGCACA+AGG 0.519507 4:+42934559 MsG0480020527.01.T01:CDS
AAGCAATGCAGCACGACTCA+AGG 0.521837 4:-42935619 None:intergenic
AAACTTGTTCAGTATAGCAA+TGG 0.522079 4:+42934935 MsG0480020527.01.T01:CDS
GAGGAACTACAACTGAGTAC+TGG 0.523471 4:-42933030 None:intergenic
GGTGGTGGAAAAGGAAGTGT+TGG 0.524726 4:-42935714 None:intergenic
CACAGTCTCCCGCTTCCCAT+CGG 0.524935 4:+42927730 MsG0480020527.01.T01:CDS
TGCAGATCGTGCTTTACTCC+CGG 0.525255 4:+42930606 MsG0480020527.01.T01:CDS
AGGACACAACTAAAAGCATA+TGG 0.526691 4:-42931822 None:intergenic
GAGCAGGACGTTGATGGAAG+CGG 0.527102 4:+42935965 MsG0480020527.01.T01:CDS
GGCTTACAATCATGGGGTGG+TGG 0.529377 4:-42935729 None:intergenic
ACTTCATGGGAGAGAACTCC+GGG 0.529692 4:+42930262 MsG0480020527.01.T01:CDS
CTGGATACACAGCACGATGA+AGG 0.531538 4:-42935548 None:intergenic
CAGTTGAGGTTCTTAATCGC+AGG 0.531656 4:-42931842 None:intergenic
TTCGAAGGAGAGCAAAGATT+AGG 0.531945 4:-42935024 None:intergenic
AGCGAAGAAGAGGGTTTCGA+AGG 0.532011 4:-42935039 None:intergenic
TTCGTCGACGGCGGCGAAGG+GGG 0.532095 4:-42927801 None:intergenic
ACTTTACGACAGCTGTGATC+CGG 0.534471 4:+42934529 MsG0480020527.01.T01:CDS
CAGAAAGTTCTCGAAAATTG+AGG 0.536111 4:-42935936 None:intergenic
TGGATGGTGTTCTGCTAGGT+GGG 0.539403 4:+42930299 MsG0480020527.01.T01:CDS
TTGTCCTGTTTATGTTGCTG+TGG 0.541558 4:+42928173 MsG0480020527.01.T01:CDS
CTACACCAACAAGCCAACCC+CGG 0.545377 4:-42928872 None:intergenic
CTGAGGCAAAGTTGAATCCT+CGG 0.545822 4:-42930856 None:intergenic
TGTAGATCTTGAATTGCCGC+AGG 0.546763 4:+42928024 MsG0480020527.01.T01:CDS
TCAGTTGATAAGGTTCCCTC+TGG 0.548943 4:-42930028 None:intergenic
ATGATGATAAAGTGAAGAGA+TGG 0.550058 4:+42936431 MsG0480020527.01.T01:three_prime_UTR
ATGGATGGTGTTCTGCTAGG+TGG 0.551445 4:+42930298 MsG0480020527.01.T01:CDS
ATATGCTTGTTTGTCTGGAG+TGG 0.553400 4:-42935586 None:intergenic
AATTTCTGAGTATTGAAAGT+GGG 0.554213 4:+42930808 MsG0480020527.01.T01:CDS
TTCCACCCATGAATCGAACT+CGG 0.555260 4:+42928728 MsG0480020527.01.T01:CDS
TCTTCGTGAAAGCGAAGAAG+AGG 0.558946 4:-42935049 None:intergenic
TCCGGGAGCAGGTCAAGGAA+TGG 0.558963 4:+42930279 MsG0480020527.01.T01:CDS
TCCAGGCTTAAATTCAGTTG+AGG 0.559717 4:-42931856 None:intergenic
ACGTTTAACTGCAGCTTCCG+AGG 0.560154 4:+42929774 MsG0480020527.01.T01:intron
AGAACTCCGGGAGCAGGTCA+AGG 0.560894 4:+42930274 MsG0480020527.01.T01:CDS
TCAGAATTGTGAATGCATCC+AGG 0.561123 4:-42935665 None:intergenic
TTTCGTCGACGGCGGCGAAG+GGG 0.561680 4:-42927802 None:intergenic
GCAAAGATTAGGCGTGGTAG+GGG 0.562168 4:-42935013 None:intergenic
TTTCGAGTGCAGATGCAATA+CGG 0.562326 4:-42930225 None:intergenic
AGAACCCGAGTTCGATTCAT+GGG 0.562507 4:-42928733 None:intergenic
ACGCCCAGCAATTCTCGCAC+CGG 0.563157 4:-42927868 None:intergenic
AAGCGGTCTTACAAGTGTGA+TGG 0.563547 4:+42935982 MsG0480020527.01.T01:CDS
AGCGGTCTTACAAGTGTGAT+GGG 0.563562 4:+42935983 MsG0480020527.01.T01:CDS
GCTACATTCAGCCATAAACT+AGG 0.564484 4:+42929953 MsG0480020527.01.T01:CDS
CATCATTGTACTGAGCTACA+AGG 0.566330 4:-42934907 None:intergenic
ATCGAACCTGAGACCTTGAT+AGG 0.566499 4:-42928917 None:intergenic
ATTGACATTGCACCCCAAAA+GGG 0.566697 4:-42936065 None:intergenic
GTGAACTCGAACAATGGTCG+TGG 0.567979 4:+42927906 MsG0480020527.01.T01:CDS
TTAATCCTATGTCAATTAGT+GGG 0.570275 4:+42936374 MsG0480020527.01.T01:three_prime_UTR
GATCCTTAGCCGCCGCTGAA+GGG 0.570725 4:-42934468 None:intergenic
GTTGATAAGGTTCCCTCTGG+AGG 0.571045 4:-42930025 None:intergenic
TGGATACACAGCACGATGAA+GGG 0.573532 4:-42935547 None:intergenic
AGTGAGTTCCAGAAACTCCT+CGG 0.575110 4:-42929791 None:intergenic
TGGAATGCAATCTGGAGTGT+AGG 0.575591 4:-42933010 None:intergenic
CAGGAGGGGTCTCTACAAGC+AGG 0.576846 4:+42933071 MsG0480020527.01.T01:CDS
CCGAACTCCTTCCTCCAAAG+AGG 0.577809 4:-42934849 None:intergenic
ATCATTTCAGCACAAGATTG+CGG 0.578336 4:-42927992 None:intergenic
AATGCACATTTGAGTCATGC+TGG 0.578457 4:+42936170 MsG0480020527.01.T01:three_prime_UTR
ACTTAGACCAACAACTTCAT+GGG 0.578621 4:+42930249 MsG0480020527.01.T01:CDS
GCATTGCTGGCAGCTTTGGA+AGG 0.578867 4:+42929820 MsG0480020527.01.T01:CDS
CCTGAATTGGAAAGCTCCTG+AGG 0.579251 4:-42933052 None:intergenic
ATTTCTGAGTATTGAAAGTG+GGG 0.579696 4:+42930809 MsG0480020527.01.T01:CDS
CGATGGGAAGCGGGAGACTG+TGG 0.581322 4:-42927729 None:intergenic
TGAACTCGAACAATGGTCGT+GGG 0.581436 4:+42927907 MsG0480020527.01.T01:CDS
ATGCAGCACGACTCAAGGAA+TGG 0.581669 4:-42935614 None:intergenic
AACAACCAATCACCAGCATA+CGG 0.581941 4:+42927824 MsG0480020527.01.T01:CDS
ATAGTGGCAGTAGAATCCCC+CGG 0.584090 4:+42928853 MsG0480020527.01.T01:CDS
GGAGCTTTCCAATTCAGGAG+GGG 0.585265 4:+42933057 MsG0480020527.01.T01:CDS
TCCACCCATGAATCGAACTC+GGG 0.586963 4:+42928729 MsG0480020527.01.T01:CDS
CAGGAGCTTTCCAATTCAGG+AGG 0.588900 4:+42933055 MsG0480020527.01.T01:CDS
CTCCGGTTCCCAGGGAAAAG+GGG 0.594689 4:+42928652 MsG0480020527.01.T01:intron
CTTCGTGAAAGCGAAGAAGA+GGG 0.595311 4:-42935048 None:intergenic
GCAGGTATCGAATGCTGAGT+AGG 0.598649 4:+42931799 MsG0480020527.01.T01:intron
TTGATAAGGTTCCCTCTGGA+GGG 0.600988 4:-42930024 None:intergenic
AAATTTCTGAGTATTGAAAG+TGG 0.602100 4:+42930807 MsG0480020527.01.T01:CDS
GGAGCCAGAAACTGTAACAA+AGG 0.605620 4:-42930067 None:intergenic
GGAGCAGGTCAAGGAATGGA+TGG 0.606280 4:+42930283 MsG0480020527.01.T01:CDS
CCATTGTTCGAGTTCACAGT+AGG 0.615293 4:-42927900 None:intergenic
GGAATGGATGGTGTTCTGCT+AGG 0.615548 4:+42930295 MsG0480020527.01.T01:CDS
TTGGAGGAAGGAGTTCGGGA+GGG 0.618469 4:+42934854 MsG0480020527.01.T01:CDS
TCGTGGGGTTGTTCTCTCTG+CGG 0.618881 4:+42927923 MsG0480020527.01.T01:CDS
GTGGTGGAAAAGGAAGTGTT+GGG 0.619547 4:-42935713 None:intergenic
AAATTGAGTGAGTCAAGCAC+CGG 0.620533 4:+42927607 MsG0480020527.01.T01:five_prime_UTR
AGGAGCTTTCCAATTCAGGA+GGG 0.623320 4:+42933056 MsG0480020527.01.T01:CDS
CAGTTGAGGACATTGAGAGA+AGG 0.625081 4:-42934987 None:intergenic
TTTGTGTTTGAGAACAACGT+TGG 0.626593 4:+42932055 MsG0480020527.01.T01:CDS
TGAGCAATATGCAAGCAAAA+GGG 0.630909 4:+42930579 MsG0480020527.01.T01:CDS
AGCATCATTCCCTTCAGCGG+CGG 0.633041 4:+42934459 MsG0480020527.01.T01:CDS
CCAAGCATCATTCCCTTCAG+CGG 0.634548 4:+42934456 MsG0480020527.01.T01:CDS
GAAGCTTCCGGCCTATTATG+GGG 0.636887 4:+42927767 MsG0480020527.01.T01:CDS
CGTGCTGCATTGCTTACCAG+TGG 0.636955 4:+42935627 MsG0480020527.01.T01:CDS
ACAGCACGATGAAGGGAACT+CGG 0.637877 4:-42935540 None:intergenic
CTGAGACCTTGATAGGAACA+CGG 0.638157 4:-42928910 None:intergenic
GAATTGGAAAGCTCCTGAGG+AGG 0.644293 4:-42933049 None:intergenic
ATTGACTAGCACTTCAAAAG+GGG 0.646004 4:-42936238 None:intergenic
AGGAGAGCAAAGATTAGGCG+TGG 0.647033 4:-42935019 None:intergenic
GCGAGGCGATGCTTACCTTG+CGG 0.648987 4:-42928696 None:intergenic
TTTGGAGGAAGGAGTTCGGG+AGG 0.649922 4:+42934853 MsG0480020527.01.T01:CDS
TTTCTTCTGAAGCTATTGAG+CGG 0.651677 4:+42927960 MsG0480020527.01.T01:CDS
GGTTACTCCCCATAATAGGC+CGG 0.651817 4:-42927774 None:intergenic
GGTGAACGTTACACACACAC+TGG 0.654083 4:-42927674 None:intergenic
GGCTGAACTCCGGATTACCA+GGG 0.654124 4:-42928675 None:intergenic
TCACCAGCATACGGATCCAG+CGG 0.656961 4:+42927833 MsG0480020527.01.T01:CDS
ACCCGAGTTCGATTCATGGG+TGG 0.658360 4:-42928730 None:intergenic
TAATCCGGAGTTCAGCCGCA+AGG 0.665206 4:+42928681 MsG0480020527.01.T01:CDS
GCACGACTCAAGGAATGGCG+AGG 0.678813 4:-42935609 None:intergenic
AGAGAAGGCTTACAATCATG+GGG 0.680038 4:-42935735 None:intergenic
GTAGATCTTGAATTGCCGCA+GGG 0.682012 4:+42928025 MsG0480020527.01.T01:CDS
TGTCCAGCTCCATAATCAGG+AGG 0.693912 4:-42930535 None:intergenic
GAAGGCTTACAATCATGGGG+TGG 0.696392 4:-42935732 None:intergenic
GCAATATGCAAGCAAAAGGG+AGG 0.699573 4:+42930582 MsG0480020527.01.T01:CDS
ACACCAACAAGCCAACCCCG+GGG 0.700286 4:-42928870 None:intergenic
GATGAGACTTACATGTCCTG+AGG 0.703037 4:-42930873 None:intergenic
TTTCTGAGTATTGAAAGTGG+GGG 0.710205 4:+42930810 MsG0480020527.01.T01:CDS
CACCAACAAGCCAACCCCGG+GGG 0.725433 4:-42928869 None:intergenic
GAACTCGAACAATGGTCGTG+GGG 0.733919 4:+42927908 MsG0480020527.01.T01:CDS
GCCCAGCAATTCTCGCACCG+GGG 0.740060 4:-42927866 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTTAAACATATAATC+AGG - Chr4:42934350-42934369 None:intergenic 10.0%
!! TTGTAAATTTGTAATAAATA+GGG + Chr4:42931448-42931467 MsG0480020527.01.T01:intron 10.0%
!! TTTGTAAATTTGTAATAAAT+AGG + Chr4:42931447-42931466 MsG0480020527.01.T01:intron 10.0%
!! TAACATTGTATAAACTTATA+AGG + Chr4:42929056-42929075 MsG0480020527.01.T01:intron 15.0%
!! TACATATCAAACAATTAAAA+TGG - Chr4:42930938-42930957 None:intergenic 15.0%
!! TATAAGTTTATACAATGTTA+TGG - Chr4:42929056-42929075 None:intergenic 15.0%
!!! ATTTTTTAACCTAAAATTAG+TGG + Chr4:42932862-42932881 MsG0480020527.01.T01:intron 15.0%
!!! CACATTTAATTTAGAAATAA+AGG + Chr4:42935277-42935296 MsG0480020527.01.T01:intron 15.0%
!!! CTTTAGTATTATTTTTGTTT+TGG + Chr4:42933637-42933656 MsG0480020527.01.T01:intron 15.0%
!!! CTTTATTTCTAAATTAAATG+TGG - Chr4:42935279-42935298 None:intergenic 15.0%
!!! GTACAATTTTTTTAGATTTT+GGG + Chr4:42930104-42930123 MsG0480020527.01.T01:intron 15.0%
!!! TACAATTTTTTTAGATTTTG+GGG + Chr4:42930105-42930124 MsG0480020527.01.T01:intron 15.0%
!!! TGTACAATTTTTTTAGATTT+TGG + Chr4:42930103-42930122 MsG0480020527.01.T01:intron 15.0%
!!! TTAACATTTTTTTGAATCAA+AGG + Chr4:42933911-42933930 MsG0480020527.01.T01:intron 15.0%
!! AATAAGCATTCAATTTCATA+AGG - Chr4:42931084-42931103 None:intergenic 20.0%
!! AATACCAGATCTTTATAAAA+TGG - Chr4:42930640-42930659 None:intergenic 20.0%
!! AATTAGTGGGAAAATAATAT+TGG + Chr4:42936387-42936406 MsG0480020527.01.T01:three_prime_UTR 20.0%
!! AATTGTACAACATTAACATA+CGG - Chr4:42930092-42930111 None:intergenic 20.0%
!! AATTGTTTGATATGTATCAA+TGG + Chr4:42930942-42930961 MsG0480020527.01.T01:intron 20.0%
!! ACAGAAAATAAAATTCCTAT+TGG - Chr4:42933334-42933353 None:intergenic 20.0%
!! ACTTATCATGTAAGATTAAT+TGG + Chr4:42928199-42928218 MsG0480020527.01.T01:intron 20.0%
!! AGGAAATAATACATACATTA+AGG + Chr4:42936106-42936125 MsG0480020527.01.T01:three_prime_UTR 20.0%
!! ATTGTTTGATATGTATCAAT+GGG + Chr4:42930943-42930962 MsG0480020527.01.T01:intron 20.0%
!! GATAAATATAATACTCTTGT+TGG + Chr4:42932817-42932836 MsG0480020527.01.T01:intron 20.0%
!! GATAGAAAAACTAATAAAAG+TGG - Chr4:42932273-42932292 None:intergenic 20.0%
!! GGAAATAATACATACATTAA+GGG + Chr4:42936107-42936126 MsG0480020527.01.T01:three_prime_UTR 20.0%
!! GGTACTTGTATAAAAAAATA+AGG - Chr4:42930838-42930857 None:intergenic 20.0%
!! GTGTTAACAAAAATCATATA+TGG - Chr4:42930424-42930443 None:intergenic 20.0%
!! TAAATTTGTAATAAATAGGG+AGG + Chr4:42931451-42931470 MsG0480020527.01.T01:intron 20.0%
!! TTAGTACAAAAATATCCAAT+GGG - Chr4:42931061-42931080 None:intergenic 20.0%
!! TTTCTCTTCATTATGAAATT+TGG + Chr4:42934008-42934027 MsG0480020527.01.T01:intron 20.0%
!!! AAAATACAACCACTAATTTT+AGG - Chr4:42932874-42932893 None:intergenic 20.0%
!!! AATCCGTAATTTTTTATTGA+AGG + Chr4:42930186-42930205 MsG0480020527.01.T01:intron 20.0%
!!! ACCTATTTCTTTTTATCATT+GGG + Chr4:42933213-42933232 MsG0480020527.01.T01:intron 20.0%
!!! ACTTATAAGGTCTTTTTTAT+AGG + Chr4:42929069-42929088 MsG0480020527.01.T01:intron 20.0%
!!! ACTTTATATCTTTTATTGCA+AGG + Chr4:42932228-42932247 MsG0480020527.01.T01:intron 20.0%
!!! AGTATTATTTTTGTTTTGGT+AGG + Chr4:42933641-42933660 MsG0480020527.01.T01:intron 20.0%
!!! ATTTAAAATGTACTACAAAC+AGG - Chr4:42935323-42935342 None:intergenic 20.0%
!!! CAAATAGTTTAGTCAATTTT+TGG + Chr4:42931482-42931501 MsG0480020527.01.T01:intron 20.0%
!!! CATTTTATTATTTAGTTACC+CGG - Chr4:42935429-42935448 None:intergenic 20.0%
!!! CTTATAAGGTCTTTTTTATA+GGG + Chr4:42929070-42929089 MsG0480020527.01.T01:intron 20.0%
!!! GTTTTTGAATTTGATTGTTT+TGG + Chr4:42928099-42928118 MsG0480020527.01.T01:intron 20.0%
!!! TTAATTCTCTTTGTTCTTTT+GGG + Chr4:42932358-42932377 MsG0480020527.01.T01:intron 20.0%
!!! TTCAATACTCAGAAATTTTA+GGG - Chr4:42930805-42930824 None:intergenic 20.0%
!!! TTTAATTCTCTTTGTTCTTT+TGG + Chr4:42932357-42932376 MsG0480020527.01.T01:intron 20.0%
!!! TTTACTTAATGATGGATTAA+AGG + Chr4:42934392-42934411 MsG0480020527.01.T01:intron 20.0%
!!! TTTCAATACTCAGAAATTTT+AGG - Chr4:42930806-42930825 None:intergenic 20.0%
!!! TTTGCTATCAATAGTAATTA+TGG - Chr4:42929474-42929493 None:intergenic 20.0%
! AAAAGTAAGCTGAAATTAAC+CGG + Chr4:42935407-42935426 MsG0480020527.01.T01:intron 25.0%
! AAACATAAATCAAGGTTATG+TGG - Chr4:42933823-42933842 None:intergenic 25.0%
! AAACCAAAATAAGATTCCTT+AGG - Chr4:42933990-42934009 None:intergenic 25.0%
! AAATTCACAAATATCATTGC+GGG + Chr4:42931749-42931768 MsG0480020527.01.T01:intron 25.0%
! AAGCATTAGAAAAGATTTAG+AGG + Chr4:42931125-42931144 MsG0480020527.01.T01:intron 25.0%
! AATAAAGGTTGCAGTAAATT+TGG - Chr4:42929630-42929649 None:intergenic 25.0%
! AATCTTTACTTTCTAGATTG+TGG + Chr4:42934235-42934254 MsG0480020527.01.T01:intron 25.0%
! ACAATGCTTGAAACAAATAA+AGG - Chr4:42929645-42929664 None:intergenic 25.0%
! ACATCGTCATTAAAATTTAC+AGG - Chr4:42929154-42929173 None:intergenic 25.0%
! AGTGATATTCAAAATGTTTG+AGG + Chr4:42935238-42935257 MsG0480020527.01.T01:intron 25.0%
! ATAAAGGTTGCAGTAAATTT+GGG - Chr4:42929629-42929648 None:intergenic 25.0%
! ATAATTTCTACCACAAGATA+CGG + Chr4:42932931-42932950 MsG0480020527.01.T01:intron 25.0%
! ATACTCTTAAAACTAAGTCA+CGG - Chr4:42932529-42932548 None:intergenic 25.0%
! ATATATTTCTTTCCTGCATA+AGG + Chr4:42929861-42929880 MsG0480020527.01.T01:intron 25.0%
! ATCATATATGGTAAGATTTG+TGG - Chr4:42930412-42930431 None:intergenic 25.0%
! ATCCATCATTAAGTAAACTT+AGG - Chr4:42934389-42934408 None:intergenic 25.0%
! ATCCTAAGTTTACTTAATGA+TGG + Chr4:42934384-42934403 MsG0480020527.01.T01:intron 25.0%
! ATCTTTACTTTCTAGATTGT+GGG + Chr4:42934236-42934255 MsG0480020527.01.T01:intron 25.0%
! ATTGTACAACATTAACATAC+GGG - Chr4:42930091-42930110 None:intergenic 25.0%
! ATTTACAGATACAGGAAAAT+AGG + Chr4:42936086-42936105 MsG0480020527.01.T01:three_prime_UTR 25.0%
! ATTTGAATCTGATAATTGGA+TGG + Chr4:42928496-42928515 MsG0480020527.01.T01:intron 25.0%
! CAAATTCACAAATATCATTG+CGG + Chr4:42931748-42931767 MsG0480020527.01.T01:intron 25.0%
! CAATGATAAAAAGAAATAGG+TGG - Chr4:42933214-42933233 None:intergenic 25.0%
! CATTATTCATTATCAAGCAA+AGG - Chr4:42932493-42932512 None:intergenic 25.0%
! CCACCTTCAATAAAAAATTA+CGG - Chr4:42930192-42930211 None:intergenic 25.0%
! CCTTGAATAAAAATGAGTTT+AGG - Chr4:42935902-42935921 None:intergenic 25.0%
! CTAGTTTCAAAATGTTCAAT+GGG - Chr4:42933942-42933961 None:intergenic 25.0%
! CTTTGAGTCATTTATGTTTA+AGG + Chr4:42933537-42933556 MsG0480020527.01.T01:intron 25.0%
! GAAGGAAAAAAAATTAGAGA+AGG - Chr4:42935753-42935772 None:intergenic 25.0%
! GATGTTTCTTATATCATGTA+TGG + Chr4:42933109-42933128 MsG0480020527.01.T01:intron 25.0%
! GATTTATGATGTAAGCATTT+GGG - Chr4:42932670-42932689 None:intergenic 25.0%
! GCAGTATTCAATAGAAATAA+TGG - Chr4:42930487-42930506 None:intergenic 25.0%
! GGCAAAATAGATCAATATTA+TGG - Chr4:42929527-42929546 None:intergenic 25.0%
! GTTAGTACAAAAATATCCAA+TGG - Chr4:42931062-42931081 None:intergenic 25.0%
! GTTCTATCATAAACCAAATT+TGG - Chr4:42931165-42931184 None:intergenic 25.0%
! TAATCAGGAAACATAAGAAT+CGG - Chr4:42934335-42934354 None:intergenic 25.0%
! TCGATCCTACAAAATTAATT+GGG + Chr4:42933715-42933734 MsG0480020527.01.T01:intron 25.0%
! TGATTTATGATGTAAGCATT+TGG - Chr4:42932671-42932690 None:intergenic 25.0%
! TGGTATTTGAATCTGATAAT+TGG + Chr4:42928492-42928511 MsG0480020527.01.T01:intron 25.0%
! TTAATCCTATGTCAATTAGT+GGG + Chr4:42936374-42936393 MsG0480020527.01.T01:three_prime_UTR 25.0%
! TTCGATCCTACAAAATTAAT+TGG + Chr4:42933714-42933733 MsG0480020527.01.T01:intron 25.0%
! TTCTCTTATTACATGTTCAA+AGG + Chr4:42933307-42933326 MsG0480020527.01.T01:intron 25.0%
! TTTCTTATATCATGTATGGT+AGG + Chr4:42933113-42933132 MsG0480020527.01.T01:intron 25.0%
!! ACTAGTTTCAAAATGTTCAA+TGG - Chr4:42933943-42933962 None:intergenic 25.0%
!! AGTAATGTAAATGTTGCTTA+TGG + Chr4:42929220-42929239 MsG0480020527.01.T01:intron 25.0%
!! ATAAAATAGAGATCCCTTTT+GGG + Chr4:42936052-42936071 MsG0480020527.01.T01:exon 25.0%
!! ATGAAAACATTTTTCACAAC+AGG - Chr4:42930004-42930023 None:intergenic 25.0%
!! ATTAATTTTGTAGGATCGAA+AGG - Chr4:42933714-42933733 None:intergenic 25.0%
!! ATTTTCTGTTAGTTGAAGAT+GGG + Chr4:42933345-42933364 MsG0480020527.01.T01:intron 25.0%
!! TATTTTCTGTTAGTTGAAGA+TGG + Chr4:42933344-42933363 MsG0480020527.01.T01:intron 25.0%
!! TCAAACCAAATGACATTTTA+TGG + Chr4:42929369-42929388 MsG0480020527.01.T01:intron 25.0%
!! TGATTGATAAAAAGCATAAG+TGG - Chr4:42931296-42931315 None:intergenic 25.0%
!! TTAAATTTGTTTCGCTTAGT+CGG + Chr4:42935337-42935356 MsG0480020527.01.T01:intron 25.0%
!! TTATTTGAGCAATTTTCAAC+AGG - Chr4:42932553-42932572 None:intergenic 25.0%
!! TTCTACCCAATTAATTTTGT+AGG - Chr4:42933723-42933742 None:intergenic 25.0%
!! TTCTTTAACTTCAAGGAAAT+GGG - Chr4:42930691-42930710 None:intergenic 25.0%
!! TTTTTCCATGCTTTACAATA+TGG + Chr4:42929324-42929343 MsG0480020527.01.T01:intron 25.0%
!!! AAACTCATTTTTATTCAAGG+AGG + Chr4:42935902-42935921 MsG0480020527.01.T01:CDS 25.0%
!!! AAATTTCTGAGTATTGAAAG+TGG + Chr4:42930807-42930826 MsG0480020527.01.T01:CDS 25.0%
!!! AACTCATTTTTATTCAAGGA+GGG + Chr4:42935903-42935922 MsG0480020527.01.T01:CDS 25.0%
!!! AAGTTTTGTTTCTTTCAGTT+AGG - Chr4:42932629-42932648 None:intergenic 25.0%
!!! AATTTCTGAGTATTGAAAGT+GGG + Chr4:42930808-42930827 MsG0480020527.01.T01:CDS 25.0%
!!! ATCATTTTGTGATTGTTGTT+TGG + Chr4:42929728-42929747 MsG0480020527.01.T01:intron 25.0%
!!! ATTTTTTTATACAAGTACCG+AGG + Chr4:42930839-42930858 MsG0480020527.01.T01:CDS 25.0%
!!! CACCTATTTCTTTTTATCAT+TGG + Chr4:42933212-42933231 MsG0480020527.01.T01:intron 25.0%
!!! CCTAAACTCATTTTTATTCA+AGG + Chr4:42935899-42935918 MsG0480020527.01.T01:CDS 25.0%
!!! CGTATTGCTATTTTATTTCA+TGG + Chr4:42933136-42933155 MsG0480020527.01.T01:intron 25.0%
!!! GTTTAGTCAATTTTTGGTTA+AGG + Chr4:42931488-42931507 MsG0480020527.01.T01:intron 25.0%
!!! TTTCCTAAGGAATCTTATTT+TGG + Chr4:42933984-42934003 MsG0480020527.01.T01:intron 25.0%
!!! TTTGATTTTGGTTTTGGTTA+GGG + Chr4:42928077-42928096 MsG0480020527.01.T01:intron 25.0%
!!! TTTTGATTTTGGTTTTGGTT+AGG + Chr4:42928076-42928095 MsG0480020527.01.T01:intron 25.0%
AAAAGTGGAGTTTAGCTATT+TGG - Chr4:42932258-42932277 None:intergenic 30.0%
AAAATCGCAACTAAGATCAA+AGG - Chr4:42933669-42933688 None:intergenic 30.0%
AAAATTCCTATGCTGTATCA+TGG + Chr4:42931578-42931597 MsG0480020527.01.T01:intron 30.0%
AAACCTGGAAACATAAATCA+AGG - Chr4:42933831-42933850 None:intergenic 30.0%
AAAGTAAGCTGAAATTAACC+GGG + Chr4:42935408-42935427 MsG0480020527.01.T01:intron 30.0%
AACACATAACAGCAATGAAA+AGG - Chr4:42934302-42934321 None:intergenic 30.0%
AACAGGAAAATTATGTTCGA+AGG - Chr4:42935306-42935325 None:intergenic 30.0%
AACCCTTTCTTCTATATGTA+TGG + Chr4:42936298-42936317 MsG0480020527.01.T01:three_prime_UTR 30.0%
AAGCAGGTATATATCTTGTA+TGG + Chr4:42933087-42933106 MsG0480020527.01.T01:intron 30.0%
AAGTTAGAAAACTTCTGTCA+CGG - Chr4:42931644-42931663 None:intergenic 30.0%
AATGCATCCAGGAAAAATAT+TGG - Chr4:42935657-42935676 None:intergenic 30.0%
AATGGCTAATTGAAACTTTG+AGG - Chr4:42930469-42930488 None:intergenic 30.0%
ACAAAACAAGTGCAAAACTA+TGG - Chr4:42928431-42928450 None:intergenic 30.0%
ACTAAAAACAGGTACAACAA+GGG - Chr4:42936209-42936228 None:intergenic 30.0%
ACTCCATTGCTCAAATAAAT+AGG - Chr4:42935134-42935153 None:intergenic 30.0%
AGTTATCTTGGATCTGAATA+TGG + Chr4:42930355-42930374 MsG0480020527.01.T01:CDS 30.0%
ATAAGATTCCTTAGGAAATG+TGG - Chr4:42933982-42934001 None:intergenic 30.0%
ATGATGATAAAGTGAAGAGA+TGG + Chr4:42936431-42936450 MsG0480020527.01.T01:three_prime_UTR 30.0%
ATTTATTCTTGTTAACCCTC+CGG + Chr4:42928635-42928654 MsG0480020527.01.T01:intron 30.0%
CAATCACAAAATGATATGTC+CGG - Chr4:42929723-42929742 None:intergenic 30.0%
CAATGGGATTTAAGAGAAAA+TGG - Chr4:42931045-42931064 None:intergenic 30.0%
CAATGTCAATTTACAGATAC+AGG + Chr4:42936078-42936097 MsG0480020527.01.T01:three_prime_UTR 30.0%
CAGCAAAACATTATCTGAAT+AGG - Chr4:42932959-42932978 None:intergenic 30.0%
CATACATGCTTCTACAAATT+TGG + Chr4:42936460-42936479 MsG0480020527.01.T01:three_prime_UTR 30.0%
CATGATCATGTCATAAAAAC+TGG + Chr4:42935157-42935176 MsG0480020527.01.T01:intron 30.0%
CTTTCACAGTTATATCTTCA+AGG - Chr4:42936021-42936040 None:intergenic 30.0%
GAACAAAGAGAATTAAAGCT+TGG - Chr4:42932354-42932373 None:intergenic 30.0%
GATAATAGGATGATTTAGTG+AGG + Chr4:42928264-42928283 MsG0480020527.01.T01:intron 30.0%
GATTCCAGGAAAACAAAATA+TGG - Chr4:42932778-42932797 None:intergenic 30.0%
GCATAAGTGGTCAATTTAAT+TGG - Chr4:42931283-42931302 None:intergenic 30.0%
GCCCAATGATAAAAAGAAAT+AGG - Chr4:42933217-42933236 None:intergenic 30.0%
GTAATAAATAGGGAGGTTAA+GGG + Chr4:42931458-42931477 MsG0480020527.01.T01:intron 30.0%
GTGATCATTGTGATGATAAT+AGG + Chr4:42928250-42928269 MsG0480020527.01.T01:intron 30.0%
GTTAATCCTATGTCAATTAG+TGG + Chr4:42936373-42936392 MsG0480020527.01.T01:three_prime_UTR 30.0%
GTTATCTTGGATCTGAATAT+GGG + Chr4:42930356-42930375 MsG0480020527.01.T01:CDS 30.0%
GTTCATATTATTGCATGTTC+AGG + Chr4:42928453-42928472 MsG0480020527.01.T01:intron 30.0%
GTTTCAATAAGACCAAGAAT+AGG - Chr4:42929569-42929588 None:intergenic 30.0%
TAAAGGTTGCAGTAAATTTG+GGG - Chr4:42929628-42929647 None:intergenic 30.0%
TAACCTTGATTTATGTTTCC+AGG + Chr4:42933825-42933844 MsG0480020527.01.T01:intron 30.0%
TAATAAATAGGGAGGTTAAG+GGG + Chr4:42931459-42931478 MsG0480020527.01.T01:intron 30.0%
TAATCTGATAAACATTGCCT+AGG - Chr4:42929424-42929443 None:intergenic 30.0%
TAATGTGCGACTGTTTAAAT+GGG + Chr4:42932150-42932169 MsG0480020527.01.T01:intron 30.0%
TATATGCAAAATTCCTTGTC+AGG + Chr4:42935827-42935846 MsG0480020527.01.T01:intron 30.0%
TATTTGCAACATGTTAGAAC+TGG - Chr4:42931708-42931727 None:intergenic 30.0%
TCAATCACTTACCTTAAATG+TGG + Chr4:42931309-42931328 MsG0480020527.01.T01:intron 30.0%
TCTATCTTCAATGTCTGTTT+AGG + Chr4:42935095-42935114 MsG0480020527.01.T01:CDS 30.0%
TCTCCTATTTATTTGAGCAA+TGG + Chr4:42935128-42935147 MsG0480020527.01.T01:intron 30.0%
TCTTTACTTTCTAGATTGTG+GGG + Chr4:42934237-42934256 MsG0480020527.01.T01:intron 30.0%
TGAATTTAAGCCTGGAAATT+CGG + Chr4:42931863-42931882 MsG0480020527.01.T01:CDS 30.0%
TGATTTCAAACCAAGCAATT+AGG - Chr4:42928802-42928821 None:intergenic 30.0%
TGCCATACATATAGAAGAAA+GGG - Chr4:42936303-42936322 None:intergenic 30.0%
TGGATGCACAAACTATAAAA+GGG - Chr4:42932334-42932353 None:intergenic 30.0%
TGGTTTATGATAGAACACTA+TGG + Chr4:42931169-42931188 MsG0480020527.01.T01:intron 30.0%
TGTAATAAATAGGGAGGTTA+AGG + Chr4:42931457-42931476 MsG0480020527.01.T01:intron 30.0%
TTAAAATTTACAGGCCCATT+AGG - Chr4:42929145-42929164 None:intergenic 30.0%
TTAATGTGCGACTGTTTAAA+TGG + Chr4:42932149-42932168 MsG0480020527.01.T01:intron 30.0%
TTGAGCCATAAAATGTCATT+TGG - Chr4:42929377-42929396 None:intergenic 30.0%
TTGCCATACATATAGAAGAA+AGG - Chr4:42936304-42936323 None:intergenic 30.0%
TTGGATGCACAAACTATAAA+AGG - Chr4:42932335-42932354 None:intergenic 30.0%
! AAACTTGTTCAGTATAGCAA+TGG + Chr4:42934935-42934954 MsG0480020527.01.T01:CDS 30.0%
! AACAAATGAGTACACTGATT+TGG + Chr4:42930776-42930795 MsG0480020527.01.T01:CDS 30.0%
! ACATTTTTCACAACAGGTAT+TGG - Chr4:42929998-42930017 None:intergenic 30.0%
! AGATCAGATTTTCTTAGCTT+TGG - Chr4:42932427-42932446 None:intergenic 30.0%
! ATCAGTGTACTCATTTGTTA+CGG - Chr4:42930775-42930794 None:intergenic 30.0%
! ATGTCAGTTCTTTAACTTCA+AGG - Chr4:42930698-42930717 None:intergenic 30.0%
! ATTTTCCCACTAATTGACAT+AGG - Chr4:42936382-42936401 None:intergenic 30.0%
! CATAAAATAGAGATCCCTTT+TGG + Chr4:42936051-42936070 MsG0480020527.01.T01:exon 30.0%
! CATTTTCTCTTAAATCCCAT+TGG + Chr4:42931043-42931062 MsG0480020527.01.T01:intron 30.0%
! CTGAATAACACAAAAGTACA+TGG - Chr4:42932208-42932227 None:intergenic 30.0%
! GACACCATTTTATAAAGATC+TGG + Chr4:42930633-42930652 MsG0480020527.01.T01:CDS 30.0%
! GTTCTTTAACTTCAAGGAAA+TGG - Chr4:42930692-42930711 None:intergenic 30.0%
! TAAAATAGAGATCCCTTTTG+GGG + Chr4:42936053-42936072 MsG0480020527.01.T01:exon 30.0%
! TGAAACTAAGATTTGAGACT+TGG + Chr4:42933561-42933580 MsG0480020527.01.T01:intron 30.0%
! TGTTGAACATTTTCATACTG+TGG - Chr4:42931995-42932014 None:intergenic 30.0%
! TTGATAGCAAAAGTAGATAG+AGG + Chr4:42929483-42929502 MsG0480020527.01.T01:intron 30.0%
! TTTCATTGCTGTTATGTGTT+TGG + Chr4:42934302-42934321 MsG0480020527.01.T01:intron 30.0%
!! ATAGGAATTTTCAAGAGACA+AGG - Chr4:42931569-42931588 None:intergenic 30.0%
!! ATTTCTGAGTATTGAAAGTG+GGG + Chr4:42930809-42930828 MsG0480020527.01.T01:CDS 30.0%
!! GGTCTTATTGAAACTGTAAA+AGG + Chr4:42929575-42929594 MsG0480020527.01.T01:intron 30.0%
!! TGTGTTTTATTCTTCAACTG+CGG + Chr4:42935689-42935708 MsG0480020527.01.T01:CDS 30.0%
!!! ATGATGGATTAAAGGCTTTT+TGG + Chr4:42934400-42934419 MsG0480020527.01.T01:intron 30.0%
!!! CCGTAATTTTTTATTGAAGG+TGG + Chr4:42930189-42930208 MsG0480020527.01.T01:intron 30.0%
!!! GATTTTTGGGGTTTTGATTT+TGG + Chr4:42928065-42928084 MsG0480020527.01.T01:intron 30.0%
!!! TAGTTTTGCACTTGTTTTGT+TGG + Chr4:42928431-42928450 MsG0480020527.01.T01:intron 30.0%
!!! TGATGGATTAAAGGCTTTTT+GGG + Chr4:42934401-42934420 MsG0480020527.01.T01:intron 30.0%
!!! TTACTTGTACTGTTTTTTGC+AGG + Chr4:42934817-42934836 MsG0480020527.01.T01:intron 30.0%
!!! TTTTTTATGTTGTAGTGCGT+TGG + Chr4:42935515-42935534 MsG0480020527.01.T01:intron 30.0%
AAATCCTTCCTCTCACAAAA+TGG - Chr4:42936138-42936157 None:intergenic 35.0%
AACCTAAATTGTATGTCCCT+TGG + Chr4:42934596-42934615 MsG0480020527.01.T01:intron 35.0%
AAGTTGAACAAACGAAACCA+TGG - Chr4:42933281-42933300 None:intergenic 35.0%
AATGTGCGACTGTTTAAATG+GGG + Chr4:42932151-42932170 MsG0480020527.01.T01:intron 35.0%
AATTCGGTAAGTGCATTGAA+TGG + Chr4:42931879-42931898 MsG0480020527.01.T01:intron 35.0%
ACATTCTGATGTTAAAGCAC+AGG + Chr4:42930131-42930150 MsG0480020527.01.T01:intron 35.0%
ACCCTAGAGTAACAAAAGAT+TGG + Chr4:42932748-42932767 MsG0480020527.01.T01:intron 35.0%
ACTTAGACCAACAACTTCAT+GGG + Chr4:42930249-42930268 MsG0480020527.01.T01:CDS 35.0%
AGACAACTAACATCAATCCA+AGG - Chr4:42934616-42934635 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + Chr4:42931137-42931156 MsG0480020527.01.T01:intron 35.0%
AGCAAAGATAGAACAACTTC+CGG - Chr4:42934551-42934570 None:intergenic 35.0%
AGTCATAGTTCACAGTTTAG+TGG - Chr4:42933864-42933883 None:intergenic 35.0%
AGTGGAGATTAAACAAAACC+TGG - Chr4:42933846-42933865 None:intergenic 35.0%
AGTTCCAAGCTCTCAAAATT+TGG + Chr4:42931518-42931537 MsG0480020527.01.T01:intron 35.0%
ATATTTCGCCACATTTCCTA+AGG + Chr4:42933971-42933990 MsG0480020527.01.T01:intron 35.0%
ATCATTTCAGCACAAGATTG+CGG - Chr4:42927995-42928014 None:intergenic 35.0%
ATCCAAGGGACATACAATTT+AGG - Chr4:42934601-42934620 None:intergenic 35.0%
ATCTTGCATCAGATCGAAAT+GGG - Chr4:42933782-42933801 None:intergenic 35.0%
ATGATATGTCCGGCATATTT+AGG - Chr4:42929713-42929732 None:intergenic 35.0%
ATGTCATAAAAACTGGTGGA+AGG + Chr4:42935164-42935183 MsG0480020527.01.T01:intron 35.0%
ATTCGGTAAGTGCATTGAAT+GGG + Chr4:42931880-42931899 MsG0480020527.01.T01:intron 35.0%
ATTGACTAGCACTTCAAAAG+GGG - Chr4:42936241-42936260 None:intergenic 35.0%
CAAATGTGAGTCCACATTTA+AGG - Chr4:42931323-42931342 None:intergenic 35.0%
CAAGCTCTCAAAATTTGGAA+GGG + Chr4:42931523-42931542 MsG0480020527.01.T01:intron 35.0%
CACAGTTATATCTTCAAGGA+AGG - Chr4:42936017-42936036 None:intergenic 35.0%
CACTACCATATTGTAAAGCA+TGG - Chr4:42929332-42929351 None:intergenic 35.0%
CAGAAAGTTCTCGAAAATTG+AGG - Chr4:42935939-42935958 None:intergenic 35.0%
CAGTAAACCAACATAACAAG+CGG - Chr4:42928536-42928555 None:intergenic 35.0%
CATCATACAGTCCTAGTTTA+TGG - Chr4:42929967-42929986 None:intergenic 35.0%
CATGCTTTACAATATGGTAG+TGG + Chr4:42929330-42929349 MsG0480020527.01.T01:intron 35.0%
CATTCAGTTCCTAAATATGC+CGG + Chr4:42929701-42929720 MsG0480020527.01.T01:intron 35.0%
CATTCTGATGTTAAAGCACA+GGG + Chr4:42930132-42930151 MsG0480020527.01.T01:intron 35.0%
CCCTAGAGTAACAAAAGATT+GGG + Chr4:42932749-42932768 MsG0480020527.01.T01:intron 35.0%
CTAAAAACAGGTACAACAAG+GGG - Chr4:42936208-42936227 None:intergenic 35.0%
CTATCTGACAGCATCATTTA+AGG - Chr4:42928837-42928856 None:intergenic 35.0%
CTGAGATTGTATTGAAGACA+TGG - Chr4:42931005-42931024 None:intergenic 35.0%
CTTTGTAGTGTATTGCAGTA+TGG + Chr4:42931953-42931972 MsG0480020527.01.T01:intron 35.0%
GAATCTCTCTGTAGTTATCT+TGG + Chr4:42930343-42930362 MsG0480020527.01.T01:CDS 35.0%
GACAACTAACATCAATCCAA+GGG - Chr4:42934615-42934634 None:intergenic 35.0%
GACAAGGATGACAAAATGTT+CGG - Chr4:42931553-42931572 None:intergenic 35.0%
GACTAAAAACAGGTACAACA+AGG - Chr4:42936210-42936229 None:intergenic 35.0%
GATAAAGTGAAGAGATGGTT+TGG + Chr4:42936436-42936455 MsG0480020527.01.T01:three_prime_UTR 35.0%
GATAATTGGATGGTTTAGTG+AGG + Chr4:42928506-42928525 MsG0480020527.01.T01:intron 35.0%
GATCATGTCATAAAAACTGG+TGG + Chr4:42935160-42935179 MsG0480020527.01.T01:intron 35.0%
GGTCACAAATGACTAAAAAC+AGG - Chr4:42936220-42936239 None:intergenic 35.0%
GTAAAAGGATGCAATCTTCA+AGG + Chr4:42929590-42929609 MsG0480020527.01.T01:intron 35.0%
GTGAAATACTGCAATTCCAT+AGG + Chr4:42933439-42933458 MsG0480020527.01.T01:intron 35.0%
TAAAAACAGGTACAACAAGG+GGG - Chr4:42936207-42936226 None:intergenic 35.0%
TAAATGATGCTGTCAGATAG+TGG + Chr4:42928837-42928856 MsG0480020527.01.T01:intron 35.0%
TAACAGCAGTCATCAATATC+TGG - Chr4:42936357-42936376 None:intergenic 35.0%
TACATGTTCAAAGGTCCAAT+AGG + Chr4:42933316-42933335 MsG0480020527.01.T01:intron 35.0%
TAGAGAAGGCTTACAATCAT+GGG - Chr4:42935739-42935758 None:intergenic 35.0%
TATGTTTAAGCTTCGTGACT+AGG + Chr4:42933490-42933509 MsG0480020527.01.T01:intron 35.0%
TCACAATGATCACATGCATA+AGG - Chr4:42928243-42928262 None:intergenic 35.0%
TGAAGATAGATGCGATAATC+AGG - Chr4:42935085-42935104 None:intergenic 35.0%
TGAGCAATATGCAAGCAAAA+GGG + Chr4:42930579-42930598 MsG0480020527.01.T01:CDS 35.0%
TGATATGTATCAATGGGAGA+CGG + Chr4:42930949-42930968 MsG0480020527.01.T01:intron 35.0%
TTAGAGAAGGCTTACAATCA+TGG - Chr4:42935740-42935759 None:intergenic 35.0%
TTATAAAATGGTGTCTGCTC+CGG - Chr4:42930628-42930647 None:intergenic 35.0%
TTCAATACAATCTCAGCTTG+AGG + Chr4:42931009-42931028 MsG0480020527.01.T01:intron 35.0%
TTTGTGTTTGAGAACAACGT+TGG + Chr4:42932055-42932074 MsG0480020527.01.T01:CDS 35.0%
! ACATTGACTAGCACTTCAAA+AGG - Chr4:42936243-42936262 None:intergenic 35.0%
! ACATTTTCATACTGTGGATC+TGG - Chr4:42931989-42932008 None:intergenic 35.0%
! AGAACAACGTTGGATTTTCA+AGG + Chr4:42932065-42932084 MsG0480020527.01.T01:CDS 35.0%
! AGGACACAACTAAAAGCATA+TGG - Chr4:42931825-42931844 None:intergenic 35.0%
! ATCTTCAAGCTCAGTTGATA+AGG - Chr4:42930041-42930060 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATT+TGG + Chr4:42931149-42931168 MsG0480020527.01.T01:intron 35.0%
! CATGTCTAGACATGTTTTAC+TGG + Chr4:42930907-42930926 MsG0480020527.01.T01:intron 35.0%
! CATTGACTAGCACTTCAAAA+GGG - Chr4:42936242-42936261 None:intergenic 35.0%
! CCCAATCTTTTGTTACTCTA+GGG - Chr4:42932752-42932771 None:intergenic 35.0%
! GTAGACTTTTGCTTCAAGAA+TGG + Chr4:42934876-42934895 MsG0480020527.01.T01:CDS 35.0%
! GTTATCCAATACTTGCTGAT+TGG + Chr4:42930971-42930990 MsG0480020527.01.T01:intron 35.0%
! TATGGGAACACTTTTGCATT+AGG + Chr4:42930373-42930392 MsG0480020527.01.T01:CDS 35.0%
! TCTATCGATTATTGAGTGTG+TGG + Chr4:42932287-42932306 MsG0480020527.01.T01:intron 35.0%
! TTCATGGGTGGAACAATTTT+TGG - Chr4:42928721-42928740 None:intergenic 35.0%
!! ATTCCTTGTCAGGTTTGTTA+AGG + Chr4:42935837-42935856 MsG0480020527.01.T01:intron 35.0%
!! TTTCTGAGTATTGAAAGTGG+GGG + Chr4:42930810-42930829 MsG0480020527.01.T01:CDS 35.0%
!! TTTCTTCTGAAGCTATTGAG+CGG + Chr4:42927960-42927979 MsG0480020527.01.T01:CDS 35.0%
!! TTTGCATCTACTTGTTGTCT+TGG + Chr4:42929667-42929686 MsG0480020527.01.T01:intron 35.0%
!!! ATTTTGTTTTCCTGGAATCG+TGG + Chr4:42932779-42932798 MsG0480020527.01.T01:intron 35.0%
!!! GCATCCATATTTTGTTTTCC+TGG + Chr4:42932771-42932790 MsG0480020527.01.T01:intron 35.0%
!!! TGGGGTTTTGATTTTGGTTT+TGG + Chr4:42928071-42928090 MsG0480020527.01.T01:intron 35.0%
AAACCAATGCTTCAGAAGCT+TGG - Chr4:42935452-42935471 None:intergenic 40.0%
AAATTGAGTGAGTCAAGCAC+CGG + Chr4:42927607-42927626 MsG0480020527.01.T01:five_prime_UTR 40.0%
AACAAACGAAACCATGGTCA+AGG - Chr4:42933275-42933294 None:intergenic 40.0%
AACAACCAATCACCAGCATA+CGG + Chr4:42927824-42927843 MsG0480020527.01.T01:CDS 40.0%
AAGACCAAGAATAGGCAGAA+GGG - Chr4:42929561-42929580 None:intergenic 40.0%
AAGATTGCAACCAAGATCGA+AGG - Chr4:42933747-42933766 None:intergenic 40.0%
AAGTGCAAAACTATGGACCA+TGG - Chr4:42928424-42928443 None:intergenic 40.0%
AATACAATCTCAGCTTGAGG+CGG + Chr4:42931012-42931031 MsG0480020527.01.T01:intron 40.0%
AATGCACATTTGAGTCATGC+TGG + Chr4:42936170-42936189 MsG0480020527.01.T01:three_prime_UTR 40.0%
AATGCACTTACCGAATTTCC+AGG - Chr4:42931876-42931895 None:intergenic 40.0%
AATTGACATTGCACCCCAAA+AGG - Chr4:42936069-42936088 None:intergenic 40.0%
AATTGTCCAGCTCCATAATC+AGG - Chr4:42930541-42930560 None:intergenic 40.0%
ACAAGAGAATGCTGTCATTG+TGG - Chr4:42934731-42934750 None:intergenic 40.0%
ACAGTGATTTGACTCAACTC+AGG - Chr4:42933410-42933429 None:intergenic 40.0%
ACCTCAACTGAATTTAAGCC+TGG + Chr4:42931855-42931874 MsG0480020527.01.T01:CDS 40.0%
AGAACTGACATGTGTTTCAC+AGG + Chr4:42930707-42930726 MsG0480020527.01.T01:intron 40.0%
AGAGAAGGCTTACAATCATG+GGG - Chr4:42935738-42935757 None:intergenic 40.0%
AGAGTCTTTGCATTCTTGTC+TGG + Chr4:42930511-42930530 MsG0480020527.01.T01:CDS 40.0%
AGCAAACCCAACAAAAAGAC+CGG - Chr4:42934113-42934132 None:intergenic 40.0%
AGCAGTGATATACCTTATGC+AGG - Chr4:42929876-42929895 None:intergenic 40.0%
AGTCCTTAACAAACCTGACA+AGG - Chr4:42935843-42935862 None:intergenic 40.0%
ATATGCTTGTTTGTCTGGAG+TGG - Chr4:42935589-42935608 None:intergenic 40.0%
ATTGAAGGTGGACACTTGTA+AGG + Chr4:42930201-42930220 MsG0480020527.01.T01:intron 40.0%
ATTGACATTGCACCCCAAAA+GGG - Chr4:42936068-42936087 None:intergenic 40.0%
CAATTGGACACAAGACGATA+TGG + Chr4:42930556-42930575 MsG0480020527.01.T01:CDS 40.0%
CACATACCATGATACAGCAT+AGG - Chr4:42931587-42931606 None:intergenic 40.0%
CACATCCAATCAGCAAGTAT+TGG - Chr4:42930979-42930998 None:intergenic 40.0%
CACCAAATGACAAATCGTTC+GGG - Chr4:42928759-42928778 None:intergenic 40.0%
CACTTAGACCAACAACTTCA+TGG + Chr4:42930248-42930267 MsG0480020527.01.T01:CDS 40.0%
CATCATTGTACTGAGCTACA+AGG - Chr4:42934910-42934929 None:intergenic 40.0%
CATGCCTTTGTTACAGTTTC+TGG + Chr4:42930063-42930082 MsG0480020527.01.T01:CDS 40.0%
CCAAGCTCTCAAAATTTGGA+AGG + Chr4:42931522-42931541 MsG0480020527.01.T01:intron 40.0%
CCACCAAATGACAAATCGTT+CGG - Chr4:42928760-42928779 None:intergenic 40.0%
CCATAGGATTCTAATGATCC+AGG + Chr4:42933455-42933474 MsG0480020527.01.T01:intron 40.0%
CCTGGATCATTAGAATCCTA+TGG - Chr4:42933458-42933477 None:intergenic 40.0%
CTAGGACTGTATGATGTTCA+AGG + Chr4:42929971-42929990 MsG0480020527.01.T01:CDS 40.0%
GAAAAATATTGGACTGCCAC+TGG - Chr4:42935646-42935665 None:intergenic 40.0%
GAACTTTCTGATTGAAGAGC+AGG + Chr4:42935949-42935968 MsG0480020527.01.T01:CDS 40.0%
GATAAAGACAGAGAAAGCCT+AGG + Chr4:42929404-42929423 MsG0480020527.01.T01:intron 40.0%
GATCGAAATGGGATAGCAAT+TGG - Chr4:42933771-42933790 None:intergenic 40.0%
GATCTTGCATCAGATCGAAA+TGG - Chr4:42933783-42933802 None:intergenic 40.0%
GCTACATTCAGCCATAAACT+AGG + Chr4:42929953-42929972 MsG0480020527.01.T01:CDS 40.0%
GTGAGCAATATGCAAGCAAA+AGG + Chr4:42930578-42930597 MsG0480020527.01.T01:CDS 40.0%
GTGGCATATGATGTCAATAC+TGG - Chr4:42935570-42935589 None:intergenic 40.0%
TAAGACCAAGAATAGGCAGA+AGG - Chr4:42929562-42929581 None:intergenic 40.0%
TATAAAATGGTGTCTGCTCC+GGG - Chr4:42930627-42930646 None:intergenic 40.0%
TATGGCTCGTACAATTGACA+AGG - Chr4:42929456-42929475 None:intergenic 40.0%
TCAACCACAGCAACATAAAC+AGG - Chr4:42928180-42928199 None:intergenic 40.0%
TCAGAATTGTGAATGCATCC+AGG - Chr4:42935668-42935687 None:intergenic 40.0%
TCCAGGCTTAAATTCAGTTG+AGG - Chr4:42931859-42931878 None:intergenic 40.0%
TCTAGACAAACCGTTGTGTT+CGG + Chr4:42928971-42928990 MsG0480020527.01.T01:intron 40.0%
TGAATAGGAACCGTATCTTG+TGG - Chr4:42932944-42932963 None:intergenic 40.0%
TGATTATGGAGCTGGACAAT+TGG + Chr4:42930540-42930559 MsG0480020527.01.T01:CDS 40.0%
TGCTAGATGCTAGTCCTAAT+GGG + Chr4:42929128-42929147 MsG0480020527.01.T01:CDS 40.0%
TGTGATGTCTTTCTCTTTGC+AGG + Chr4:42931781-42931800 MsG0480020527.01.T01:intron 40.0%
TTCGAAGGAGAGCAAAGATT+AGG - Chr4:42935027-42935046 None:intergenic 40.0%
TTGTCCTGTTTATGTTGCTG+TGG + Chr4:42928173-42928192 MsG0480020527.01.T01:CDS 40.0%
TTTGTAGAAGAAGAGTCGTC+TGG + Chr4:42928132-42928151 MsG0480020527.01.T01:intron 40.0%
! AAATGTTTTCATCCCTCCAG+AGG + Chr4:42930012-42930031 MsG0480020527.01.T01:CDS 40.0%
! AATGTTTTCATCCCTCCAGA+GGG + Chr4:42930013-42930032 MsG0480020527.01.T01:CDS 40.0%
! ACTCACTAAAAGTGCATTGC+TGG + Chr4:42929807-42929826 MsG0480020527.01.T01:CDS 40.0%
! CATTTTTATTCAAGGAGGGC+AGG + Chr4:42935907-42935926 MsG0480020527.01.T01:CDS 40.0%
! GCCCAATCTTTTGTTACTCT+AGG - Chr4:42932753-42932772 None:intergenic 40.0%
! GGTTAAGGGTTGCGATTTTT+GGG + Chr4:42928052-42928071 MsG0480020527.01.T01:intron 40.0%
! GTTAAGGGTTGCGATTTTTG+GGG + Chr4:42928053-42928072 MsG0480020527.01.T01:intron 40.0%
! TCTTCTGCTGAATTCTAGAG+TGG + Chr4:42932391-42932410 MsG0480020527.01.T01:intron 40.0%
! TGGCAGTCCAATATTTTTCC+TGG + Chr4:42935647-42935666 MsG0480020527.01.T01:CDS 40.0%
! TGGTCTGTGACAAATGCTTT+TGG + Chr4:42934266-42934285 MsG0480020527.01.T01:intron 40.0%
! TTTCGAGTGCAGATGCAATA+CGG - Chr4:42930228-42930247 None:intergenic 40.0%
!! AGCATTTGGGTTTGATAGTG+TGG - Chr4:42932657-42932676 None:intergenic 40.0%
!! CCTTCCAAATTTTGAGAGCT+TGG - Chr4:42931525-42931544 None:intergenic 40.0%
!! CTTCGTGACTAGGTTGTTTT+AGG + Chr4:42933500-42933519 MsG0480020527.01.T01:intron 40.0%
!! TGATTGGTTGTTTTCGTCGA+CGG - Chr4:42927816-42927835 None:intergenic 40.0%
!! TTGGGTTTGATAGTGTGGAA+CGG - Chr4:42932652-42932671 None:intergenic 40.0%
!!! AGGTTTTCCGCTTGTTATGT+TGG + Chr4:42928526-42928545 MsG0480020527.01.T01:intron 40.0%
!!! TTGCTCCTGGTTCACTTTTT+GGG + Chr4:42929927-42929946 MsG0480020527.01.T01:CDS 40.0%
AACATAGACGACTCAAAGCC+TGG - Chr4:42933476-42933495 None:intergenic 45.0%
AACTTCATGGGAGAGAACTC+CGG + Chr4:42930261-42930280 MsG0480020527.01.T01:CDS 45.0%
AAGCGGTCTTACAAGTGTGA+TGG + Chr4:42935982-42936001 MsG0480020527.01.T01:CDS 45.0%
ACCAAAAACCATGGCGGTAA+GGG + Chr4:42927706-42927725 MsG0480020527.01.T01:exon 45.0%
ACCAAGCAATTAGGCTCAAG+TGG - Chr4:42928793-42928812 None:intergenic 45.0%
ACCACTTGAGCCTAATTGCT+TGG + Chr4:42928789-42928808 MsG0480020527.01.T01:intron 45.0%
ACCGATCAGACCAAAAACCA+TGG + Chr4:42927697-42927716 MsG0480020527.01.T01:exon 45.0%
ACGTCTTCGATCATAAGTGC+CGG - Chr4:42928308-42928327 None:intergenic 45.0%
ACTTTACGACAGCTGTGATC+CGG + Chr4:42934529-42934548 MsG0480020527.01.T01:CDS 45.0%
AGAACCCGAGTTCGATTCAT+GGG - Chr4:42928736-42928755 None:intergenic 45.0%
AGACCAAGAATAGGCAGAAG+GGG - Chr4:42929560-42929579 None:intergenic 45.0%
AGACCCAACCTAGGAATTGT+TGG - Chr4:42928954-42928973 None:intergenic 45.0%
AGAGCAGTGTTGTCAATCGT+GGG - Chr4:42929000-42929019 None:intergenic 45.0%
AGCAAAGATTAGGCGTGGTA+GGG - Chr4:42935017-42935036 None:intergenic 45.0%
AGCACAGGGATTGCAATATC+TGG + Chr4:42930146-42930165 MsG0480020527.01.T01:intron 45.0%
AGCGGTCTTACAAGTGTGAT+GGG + Chr4:42935983-42936002 MsG0480020527.01.T01:CDS 45.0%
AGGAGCTTTCCAATTCAGGA+GGG + Chr4:42933056-42933075 MsG0480020527.01.T01:CDS 45.0%
AGTGAGTTCCAGAAACTCCT+CGG - Chr4:42929794-42929813 None:intergenic 45.0%
ATCGAACCTGAGACCTTGAT+AGG - Chr4:42928920-42928939 None:intergenic 45.0%
ATTGAAGAGCAGGACGTTGA+TGG + Chr4:42935959-42935978 MsG0480020527.01.T01:CDS 45.0%
CAGGTGCTAATTGTGGTTGA+TGG + Chr4:42928472-42928491 MsG0480020527.01.T01:intron 45.0%
CAGTTGAGGACATTGAGAGA+AGG - Chr4:42934990-42935009 None:intergenic 45.0%
CAGTTGAGGTTCTTAATCGC+AGG - Chr4:42931845-42931864 None:intergenic 45.0%
CCTACTGTGAACTCGAACAA+TGG + Chr4:42927900-42927919 MsG0480020527.01.T01:CDS 45.0%
CGAGGATATGCTTGTTTGTC+TGG - Chr4:42935594-42935613 None:intergenic 45.0%
CTCAAACCGTGTTCCTATCA+AGG + Chr4:42928904-42928923 MsG0480020527.01.T01:CDS 45.0%
CTCCCGAACGATTTGTCATT+TGG + Chr4:42928754-42928773 MsG0480020527.01.T01:CDS 45.0%
CTGAGACCTTGATAGGAACA+CGG - Chr4:42928913-42928932 None:intergenic 45.0%
CTGAGGCAAAGTTGAATCCT+CGG - Chr4:42930859-42930878 None:intergenic 45.0%
CTGATGCAAGATCTCGATTC+TGG + Chr4:42933790-42933809 MsG0480020527.01.T01:intron 45.0%
CTTCGTGAAAGCGAAGAAGA+GGG - Chr4:42935051-42935070 None:intergenic 45.0%
CTTCTTCGCTTTCACGAAGA+AGG + Chr4:42935052-42935071 MsG0480020527.01.T01:CDS 45.0%
CTTGATAGGAACACGGTTTG+AGG - Chr4:42928906-42928925 None:intergenic 45.0%
GAGGAACTACAACTGAGTAC+TGG - Chr4:42933033-42933052 None:intergenic 45.0%
GATCAGACCAAAAACCATGG+CGG + Chr4:42927700-42927719 MsG0480020527.01.T01:exon 45.0%
GATGAGACTTACATGTCCTG+AGG - Chr4:42930876-42930895 None:intergenic 45.0%
GCAAAACTATGGACCATGGT+TGG - Chr4:42928420-42928439 None:intergenic 45.0%
GCAATATGCAAGCAAAAGGG+AGG + Chr4:42930582-42930601 MsG0480020527.01.T01:CDS 45.0%
GCAGGTTATACTTGCCTCTT+TGG + Chr4:42934835-42934854 MsG0480020527.01.T01:intron 45.0%
GCATGTTCAGGTGCTAATTG+TGG + Chr4:42928465-42928484 MsG0480020527.01.T01:intron 45.0%
GGAGCCAGAAACTGTAACAA+AGG - Chr4:42930070-42930089 None:intergenic 45.0%
GGTAAGTGCATTGAATGGGA+TGG + Chr4:42931884-42931903 MsG0480020527.01.T01:intron 45.0%
GGTTATACTTGCCTCTTTGG+AGG + Chr4:42934838-42934857 MsG0480020527.01.T01:intron 45.0%
GTAGATCTTGAATTGCCGCA+GGG + Chr4:42928025-42928044 MsG0480020527.01.T01:CDS 45.0%
GTCAGTATATGTGTCGTGCA+CGG + Chr4:42928385-42928404 MsG0480020527.01.T01:intron 45.0%
GTGCTAGATGCTAGTCCTAA+TGG + Chr4:42929127-42929146 MsG0480020527.01.T01:CDS 45.0%
GTTCTCTCCCATGAAGTTGT+TGG - Chr4:42930259-42930278 None:intergenic 45.0%
GTTTCTTTCATTCTGCCTGC+CGG + Chr4:42934091-42934110 MsG0480020527.01.T01:intron 45.0%
TCTAGATTGTGGGGTAGTTG+TGG + Chr4:42934246-42934265 MsG0480020527.01.T01:intron 45.0%
TCTATCTTTGCTCGTGCACA+AGG + Chr4:42934559-42934578 MsG0480020527.01.T01:CDS 45.0%
TCTTCGTGAAAGCGAAGAAG+AGG - Chr4:42935052-42935071 None:intergenic 45.0%
TGAACTCGAACAATGGTCGT+GGG + Chr4:42927907-42927926 MsG0480020527.01.T01:CDS 45.0%
TGGATACACAGCACGATGAA+GGG - Chr4:42935550-42935569 None:intergenic 45.0%
TGGGTAGAATCCTTCGATCT+TGG + Chr4:42933734-42933753 MsG0480020527.01.T01:intron 45.0%
TGTAGATCTTGAATTGCCGC+AGG + Chr4:42928024-42928043 MsG0480020527.01.T01:CDS 45.0%
TTCCACCCATGAATCGAACT+CGG + Chr4:42928728-42928747 MsG0480020527.01.T01:CDS 45.0%
TTGATAAGGTTCCCTCTGGA+GGG - Chr4:42930027-42930046 None:intergenic 45.0%
TTGTCTGGTCCTCCTGATTA+TGG + Chr4:42930526-42930545 MsG0480020527.01.T01:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - Chr4:42931218-42931237 None:intergenic 45.0%
! ATACTTGCCTCTTTGGAGGA+AGG + Chr4:42934842-42934861 MsG0480020527.01.T01:CDS 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - Chr4:42931219-42931238 None:intergenic 45.0%
! CCATTGTTCGAGTTCACAGT+AGG - Chr4:42927903-42927922 None:intergenic 45.0%
! CCGAACGATTTGTCATTTGG+TGG + Chr4:42928757-42928776 MsG0480020527.01.T01:intron 45.0%
! GAGTTAGACTCAGCTTGTTC+CGG - Chr4:42927629-42927648 None:intergenic 45.0%
! GCTTCCATTTTGTGAGAGGA+AGG + Chr4:42936131-42936150 MsG0480020527.01.T01:three_prime_UTR 45.0%
! GGGTTAAGGGTTGCGATTTT+TGG + Chr4:42928051-42928070 MsG0480020527.01.T01:intron 45.0%
! GTTGCTTATGGTGACTTGTG+TGG + Chr4:42929232-42929251 MsG0480020527.01.T01:intron 45.0%
! GTTTTGCATCTCTGTAGCAC+CGG + Chr4:42928286-42928305 MsG0480020527.01.T01:intron 45.0%
! TGGAATGCAATCTGGAGTGT+AGG - Chr4:42933013-42933032 None:intergenic 45.0%
! TGTTGCTTGTTCCTTGACCA+TGG + Chr4:42933261-42933280 MsG0480020527.01.T01:intron 45.0%
! TTATGGTGACTTGTGTGGTG+CGG + Chr4:42929237-42929256 MsG0480020527.01.T01:intron 45.0%
! TTGTTTTCCTGGAATCGTGG+TGG + Chr4:42932782-42932801 MsG0480020527.01.T01:intron 45.0%
!! ACTCTAGGGTTTCACTCACA+GGG - Chr4:42932738-42932757 None:intergenic 45.0%
!! ATGCCAAGCTTCTGAAGCAT+TGG + Chr4:42935446-42935465 MsG0480020527.01.T01:intron 45.0%
!! CTGAGTACTGGAATGCAATC+TGG - Chr4:42933021-42933040 None:intergenic 45.0%
!! CTTGCTCCTGGTTCACTTTT+TGG + Chr4:42929926-42929945 MsG0480020527.01.T01:CDS 45.0%
!! GTGGTGGAAAAGGAAGTGTT+GGG - Chr4:42935716-42935735 None:intergenic 45.0%
!! TACTCTAGGGTTTCACTCAC+AGG - Chr4:42932739-42932758 None:intergenic 45.0%
!! TCAGTTGATAAGGTTCCCTC+TGG - Chr4:42930031-42930050 None:intergenic 45.0%
!!! ATGGTTTTTGGTCTGATCGG+TGG - Chr4:42927698-42927717 None:intergenic 45.0%
!!! GCCATGGTTTTTGGTCTGAT+CGG - Chr4:42927701-42927720 None:intergenic 45.0%
AAACAGGTACAACAAGGGGG+AGG - Chr4:42936204-42936223 None:intergenic 50.0%
AACAGGTACAACAAGGGGGA+GGG - Chr4:42936203-42936222 None:intergenic 50.0%
AACCCAACAAAAAGACCGGC+AGG - Chr4:42934109-42934128 None:intergenic 50.0%
AACCCTTAACCCTTACCCTG+CGG - Chr4:42928043-42928062 None:intergenic 50.0%
AAGCAATGCAGCACGACTCA+AGG - Chr4:42935622-42935641 None:intergenic 50.0%
AAGTGCATTGCTGGCAGCTT+TGG + Chr4:42929816-42929835 MsG0480020527.01.T01:CDS 50.0%
AATAGGCAGAAGGGGGGATA+TGG - Chr4:42929552-42929571 None:intergenic 50.0%
AATGGGGTGCATTCAGAAGC+TGG + Chr4:42932167-42932186 MsG0480020527.01.T01:intron 50.0%
ACAGCACGATGAAGGGAACT+CGG - Chr4:42935543-42935562 None:intergenic 50.0%
ACCAAGAATAGGCAGAAGGG+GGG - Chr4:42929558-42929577 None:intergenic 50.0%
ACGTTTAACTGCAGCTTCCG+AGG + Chr4:42929774-42929793 MsG0480020527.01.T01:intron 50.0%
ACTTCATGGGAGAGAACTCC+GGG + Chr4:42930262-42930281 MsG0480020527.01.T01:CDS 50.0%
AGCGAAGAAGAGGGTTTCGA+AGG - Chr4:42935042-42935061 None:intergenic 50.0%
AGGAGAGCAAAGATTAGGCG+TGG - Chr4:42935022-42935041 None:intergenic 50.0%
AGGATCCGAACAGTGCAGTT+TGG + Chr4:42934485-42934504 MsG0480020527.01.T01:CDS 50.0%
ATAGTGGCAGTAGAATCCCC+CGG + Chr4:42928853-42928872 MsG0480020527.01.T01:CDS 50.0%
ATGCAGCACGACTCAAGGAA+TGG - Chr4:42935617-42935636 None:intergenic 50.0%
ATGGATGGTGTTCTGCTAGG+TGG + Chr4:42930298-42930317 MsG0480020527.01.T01:CDS 50.0%
CAACGCCAAACTGCACTGTT+CGG - Chr4:42934493-42934512 None:intergenic 50.0%
CAGGAGCTTTCCAATTCAGG+AGG + Chr4:42933055-42933074 MsG0480020527.01.T01:CDS 50.0%
CCAAGCATCATTCCCTTCAG+CGG + Chr4:42934456-42934475 MsG0480020527.01.T01:CDS 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr4:42931217-42931236 MsG0480020527.01.T01:intron 50.0%
CCAGTGCAGACTACAGAAGA+AGG - Chr4:42935771-42935790 None:intergenic 50.0%
CCTCAGGAGCTTTCCAATTC+AGG + Chr4:42933052-42933071 MsG0480020527.01.T01:CDS 50.0%
CCTGAATTGGAAAGCTCCTG+AGG - Chr4:42933055-42933074 None:intergenic 50.0%
CCTTCTTCTGTAGTCTGCAC+TGG + Chr4:42935768-42935787 MsG0480020527.01.T01:intron 50.0%
CGAAGCTTCCGGCCTATTAT+GGG + Chr4:42927766-42927785 MsG0480020527.01.T01:CDS 50.0%
CGACGGTTACTCCCCATAAT+AGG - Chr4:42927781-42927800 None:intergenic 50.0%
CGAGGATTCAACTTTGCCTC+AGG + Chr4:42930857-42930876 MsG0480020527.01.T01:CDS 50.0%
CGTGTTCCTATCAAGGTCTC+AGG + Chr4:42928911-42928930 MsG0480020527.01.T01:CDS 50.0%
CTCAGTTGTAGTTCCTCCTC+AGG + Chr4:42933036-42933055 MsG0480020527.01.T01:CDS 50.0%
CTGGATACACAGCACGATGA+AGG - Chr4:42935551-42935570 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr4:42931214-42931233 None:intergenic 50.0%
CTTGAATTGCCGCAGGGTAA+GGG + Chr4:42928031-42928050 MsG0480020527.01.T01:intron 50.0%
GAACTCGAACAATGGTCGTG+GGG + Chr4:42927908-42927927 MsG0480020527.01.T01:CDS 50.0%
GAAGCTTCCGGCCTATTATG+GGG + Chr4:42927767-42927786 MsG0480020527.01.T01:CDS 50.0%
GAAGGCTTACAATCATGGGG+TGG - Chr4:42935735-42935754 None:intergenic 50.0%
GAATTGGAAAGCTCCTGAGG+AGG - Chr4:42933052-42933071 None:intergenic 50.0%
GACCAAAAACCATGGCGGTA+AGG + Chr4:42927705-42927724 MsG0480020527.01.T01:exon 50.0%
GACCAAGAATAGGCAGAAGG+GGG - Chr4:42929559-42929578 None:intergenic 50.0%
GAGAACCCGAGTTCGATTCA+TGG - Chr4:42928737-42928756 None:intergenic 50.0%
GAGAGCAGTGTTGTCAATCG+TGG - Chr4:42929001-42929020 None:intergenic 50.0%
GAGCAAAGATTAGGCGTGGT+AGG - Chr4:42935018-42935037 None:intergenic 50.0%
GCAAAGATTAGGCGTGGTAG+GGG - Chr4:42935016-42935035 None:intergenic 50.0%
GCAAGCCCAAAAAGTGAACC+AGG - Chr4:42929935-42929954 None:intergenic 50.0%
GCGCCAACAATTCCTAGGTT+GGG + Chr4:42928948-42928967 MsG0480020527.01.T01:intron 50.0%
GGAATGGATGGTGTTCTGCT+AGG + Chr4:42930295-42930314 MsG0480020527.01.T01:CDS 50.0%
GGAGCTTTCCAATTCAGGAG+GGG + Chr4:42933057-42933076 MsG0480020527.01.T01:CDS 50.0%
GGTGAACGTTACACACACAC+TGG - Chr4:42927677-42927696 None:intergenic 50.0%
GGTTACTCCCCATAATAGGC+CGG - Chr4:42927777-42927796 None:intergenic 50.0%
GGTTTGTCTAGACCCAACCT+AGG - Chr4:42928963-42928982 None:intergenic 50.0%
GTGAACTCGAACAATGGTCG+TGG + Chr4:42927906-42927925 MsG0480020527.01.T01:CDS 50.0%
TCCACCCATGAATCGAACTC+GGG + Chr4:42928729-42928748 MsG0480020527.01.T01:CDS 50.0%
TCTCTCTGCGGGAATCTCAA+TGG + Chr4:42927935-42927954 MsG0480020527.01.T01:CDS 50.0%
TCTTGAATTGCCGCAGGGTA+AGG + Chr4:42928030-42928049 MsG0480020527.01.T01:intron 50.0%
TGCAGATCGTGCTTTACTCC+CGG + Chr4:42930606-42930625 MsG0480020527.01.T01:CDS 50.0%
TGGATCCGTATGCTGGTGAT+TGG - Chr4:42927832-42927851 None:intergenic 50.0%
TGGATGGTGTTCTGCTAGGT+GGG + Chr4:42930299-42930318 MsG0480020527.01.T01:CDS 50.0%
TGTAGAGACCCCTCCTGAAT+TGG - Chr4:42933068-42933087 None:intergenic 50.0%
TGTCCAGCTCCATAATCAGG+AGG - Chr4:42930538-42930557 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr4:42931220-42931239 None:intergenic 50.0%
! CCTCTTTGGAGGAAGGAGTT+CGG + Chr4:42934849-42934868 MsG0480020527.01.T01:CDS 50.0%
! CTCTTTGGAGGAAGGAGTTC+GGG + Chr4:42934850-42934869 MsG0480020527.01.T01:CDS 50.0%
! CTTTTCACAGCTCTTGCTCC+TGG + Chr4:42929914-42929933 MsG0480020527.01.T01:intron 50.0%
! GGGAGCTTCCATTTTGTGAG+AGG + Chr4:42936127-42936146 MsG0480020527.01.T01:three_prime_UTR 50.0%
! GTTGATAAGGTTCCCTCTGG+AGG - Chr4:42930028-42930047 None:intergenic 50.0%
! TGCCTGCCGGTCTTTTTGTT+GGG + Chr4:42934104-42934123 MsG0480020527.01.T01:intron 50.0%
!! CAATCATGGGGTGGTGGAAA+AGG - Chr4:42935726-42935745 None:intergenic 50.0%
!! GCAGGTATCGAATGCTGAGT+AGG + Chr4:42931799-42931818 MsG0480020527.01.T01:intron 50.0%
!! GGTAGTGGACGTCAGACTAT+GGG + Chr4:42929345-42929364 MsG0480020527.01.T01:intron 50.0%
!! GGTGGTGGAAAAGGAAGTGT+TGG - Chr4:42935717-42935736 None:intergenic 50.0%
!! TGGCTTGTTGGTGTAGGCTT+CGG + Chr4:42928879-42928898 MsG0480020527.01.T01:CDS 50.0%
!! TGGTAGTGGACGTCAGACTA+TGG + Chr4:42929344-42929363 MsG0480020527.01.T01:intron 50.0%
!! TTGGTTGTTTTCGTCGACGG+CGG - Chr4:42927813-42927832 None:intergenic 50.0%
!!! GGGTGGAACAATTTTTGGCG+AGG - Chr4:42928716-42928735 None:intergenic 50.0%
ACAGGTACAACAAGGGGGAG+GGG - Chr4:42936202-42936221 None:intergenic 55.0%
ACCCGAGTTCGATTCATGGG+TGG - Chr4:42928733-42928752 None:intergenic 55.0%
ACCTAGGAATTGTTGGCGCC+TGG - Chr4:42928947-42928966 None:intergenic 55.0%
ACGGTGCTTGTGTCCAACCA+TGG + Chr4:42928404-42928423 MsG0480020527.01.T01:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr4:42931206-42931225 None:intergenic 55.0%
AGCATCATTCCCTTCAGCGG+CGG + Chr4:42934459-42934478 MsG0480020527.01.T01:CDS 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr4:42931205-42931224 MsG0480020527.01.T01:intron 55.0%
CCGAACTCCTTCCTCCAAAG+AGG - Chr4:42934852-42934871 None:intergenic 55.0%
CCGCTGAAGGGAATGATGCT+TGG - Chr4:42934459-42934478 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr4:42931212-42931231 MsG0480020527.01.T01:intron 55.0%
CGTGCTGCATTGCTTACCAG+TGG + Chr4:42935627-42935646 MsG0480020527.01.T01:CDS 55.0%
CTACACCAACAAGCCAACCC+CGG - Chr4:42928875-42928894 None:intergenic 55.0%
CTTACCTTGCGGCTGAACTC+CGG - Chr4:42928688-42928707 None:intergenic 55.0%
GAAAAGGGGCCCTGGTAATC+CGG + Chr4:42928666-42928685 MsG0480020527.01.T01:CDS 55.0%
GCGAAGCTTCCGGCCTATTA+TGG + Chr4:42927765-42927784 MsG0480020527.01.T01:CDS 55.0%
GGAGCAGGTCAAGGAATGGA+TGG + Chr4:42930283-42930302 MsG0480020527.01.T01:CDS 55.0%
GGCGCCAACAATTCCTAGGT+TGG + Chr4:42928947-42928966 MsG0480020527.01.T01:intron 55.0%
GGCTGAACTCCGGATTACCA+GGG - Chr4:42928678-42928697 None:intergenic 55.0%
GGCTTACAATCATGGGGTGG+TGG - Chr4:42935732-42935751 None:intergenic 55.0%
GGTCCTCCTGATTATGGAGC+TGG + Chr4:42930532-42930551 MsG0480020527.01.T01:CDS 55.0%
GTCTCAGGTTCGATTCCTCC+AGG + Chr4:42928926-42928945 MsG0480020527.01.T01:intron 55.0%
TAATCCGGAGTTCAGCCGCA+AGG + Chr4:42928681-42928700 MsG0480020527.01.T01:CDS 55.0%
TACACCAACAAGCCAACCCC+GGG - Chr4:42928874-42928893 None:intergenic 55.0%
TAGGAATTGTTGGCGCCTGG+AGG - Chr4:42928944-42928963 None:intergenic 55.0%
TAGTGGCAGTAGAATCCCCC+GGG + Chr4:42928854-42928873 MsG0480020527.01.T01:CDS 55.0%
TCACCAGCATACGGATCCAG+CGG + Chr4:42927833-42927852 MsG0480020527.01.T01:CDS 55.0%
TCCAGGCGCCAACAATTCCT+AGG + Chr4:42928943-42928962 MsG0480020527.01.T01:intron 55.0%
TCCATTCCTTGACCTGCTCC+CGG - Chr4:42930283-42930302 None:intergenic 55.0%
TCCCCCCTTCTGCCTATTCT+TGG + Chr4:42929554-42929573 MsG0480020527.01.T01:intron 55.0%
TCGTGGGGTTGTTCTCTCTG+CGG + Chr4:42927923-42927942 MsG0480020527.01.T01:CDS 55.0%
TGCAGCTTCCGAGGAGTTTC+TGG + Chr4:42929783-42929802 MsG0480020527.01.T01:intron 55.0%
TGCCGCAGGGTAAGGGTTAA+GGG + Chr4:42928038-42928057 MsG0480020527.01.T01:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr4:42931206-42931225 MsG0480020527.01.T01:intron 55.0%
TGTTAACCCTCCGGTTCCCA+GGG + Chr4:42928644-42928663 MsG0480020527.01.T01:intron 55.0%
TTGCCGCAGGGTAAGGGTTA+AGG + Chr4:42928037-42928056 MsG0480020527.01.T01:intron 55.0%
TTGGAGGAAGGAGTTCGGGA+GGG + Chr4:42934854-42934873 MsG0480020527.01.T01:CDS 55.0%
TTGTTAACCCTCCGGTTCCC+AGG + Chr4:42928643-42928662 MsG0480020527.01.T01:intron 55.0%
TTTGGAGGAAGGAGTTCGGG+AGG + Chr4:42934853-42934872 MsG0480020527.01.T01:CDS 55.0%
! CTGCCTGCCGGTCTTTTTGT+TGG + Chr4:42934103-42934122 MsG0480020527.01.T01:intron 55.0%
! GAGCAGGACGTTGATGGAAG+CGG + Chr4:42935965-42935984 MsG0480020527.01.T01:CDS 55.0%
! GCCCTTACCGCCATGGTTTT+TGG - Chr4:42927710-42927729 None:intergenic 55.0%
! GCTGCTGTTGCTGTTCAAGC+AGG + Chr4:42930729-42930748 MsG0480020527.01.T01:CDS 55.0%
!! GCATTGCTGGCAGCTTTGGA+AGG + Chr4:42929820-42929839 MsG0480020527.01.T01:CDS 55.0%
!! TGGAATCGTGGTGGACTGCT+GGG + Chr4:42932791-42932810 MsG0480020527.01.T01:intron 55.0%
ACACCAACAAGCCAACCCCG+GGG - Chr4:42928873-42928892 None:intergenic 60.0%
ACCCCGGTGCGAGAATTGCT+GGG + Chr4:42927865-42927884 MsG0480020527.01.T01:CDS 60.0%
ACGCCCAGCAATTCTCGCAC+CGG - Chr4:42927871-42927890 None:intergenic 60.0%
AGAACTCCGGGAGCAGGTCA+AGG + Chr4:42930274-42930293 MsG0480020527.01.T01:CDS 60.0%
AGTGGCAGTAGAATCCCCCG+GGG + Chr4:42928855-42928874 MsG0480020527.01.T01:CDS 60.0%
ATTCCCTTCAGCGGCGGCTA+AGG + Chr4:42934465-42934484 MsG0480020527.01.T01:CDS 60.0%
CACAGTCTCCCGCTTCCCAT+CGG + Chr4:42927730-42927749 MsG0480020527.01.T01:CDS 60.0%
CAGCAGTCCACCACGATTCC+AGG - Chr4:42932792-42932811 None:intergenic 60.0%
CAGGAGGGGTCTCTACAAGC+AGG + Chr4:42933071-42933090 MsG0480020527.01.T01:CDS 60.0%
CAGGTACAACAAGGGGGAGG+GGG - Chr4:42936201-42936220 None:intergenic 60.0%
CCTCCGGTTCCCAGGGAAAA+GGG + Chr4:42928651-42928670 MsG0480020527.01.T01:intron 60.0%
CGGCTGAACTCCGGATTACC+AGG - Chr4:42928679-42928698 None:intergenic 60.0%
CGTGGGGTTGTTCTCTCTGC+GGG + Chr4:42927924-42927943 MsG0480020527.01.T01:CDS 60.0%
CTCCGGTTCCCAGGGAAAAG+GGG + Chr4:42928652-42928671 MsG0480020527.01.T01:intron 60.0%
GATCCTTAGCCGCCGCTGAA+GGG - Chr4:42934471-42934490 None:intergenic 60.0%
GCACGACTCAAGGAATGGCG+AGG - Chr4:42935612-42935631 None:intergenic 60.0%
GCGAGGCGATGCTTACCTTG+CGG - Chr4:42928699-42928718 None:intergenic 60.0%
GGCAGAAGGGGGGATATGGA+TGG - Chr4:42929548-42929567 None:intergenic 60.0%
TACCCCGGTGCGAGAATTGC+TGG + Chr4:42927864-42927883 MsG0480020527.01.T01:CDS 60.0%
TCCGGGAGCAGGTCAAGGAA+TGG + Chr4:42930279-42930298 MsG0480020527.01.T01:CDS 60.0%
TCGTGGGTCGCCGAACACAA+CGG - Chr4:42928984-42929003 None:intergenic 60.0%
! CCTTTTCCCTGGGAACCGGA+GGG - Chr4:42928653-42928672 None:intergenic 60.0%
! TACCAGGGCCCCTTTTCCCT+GGG - Chr4:42928663-42928682 None:intergenic 60.0%
! TGCTAGGTGGGCGCGGTTTT+GGG + Chr4:42930311-42930330 MsG0480020527.01.T01:CDS 60.0%
! TTACCAGGGCCCCTTTTCCC+TGG - Chr4:42928664-42928683 None:intergenic 60.0%
! TTTTCGTCGACGGCGGCGAA+GGG - Chr4:42927806-42927825 None:intergenic 60.0%
!! CGGGGTTGGCTTGTTGGTGT+AGG + Chr4:42928873-42928892 MsG0480020527.01.T01:CDS 60.0%
!! CTGGAATCGTGGTGGACTGC+TGG + Chr4:42932790-42932809 MsG0480020527.01.T01:intron 60.0%
ACCGACGCACGCGAAGCTTC+CGG + Chr4:42927755-42927774 MsG0480020527.01.T01:CDS 65.0%
CACCAACAAGCCAACCCCGG+GGG - Chr4:42928872-42928891 None:intergenic 65.0%
CCCTCCGGTTCCCAGGGAAA+AGG + Chr4:42928650-42928669 MsG0480020527.01.T01:intron 65.0%
CGATGGGAAGCGGGAGACTG+TGG - Chr4:42927732-42927751 None:intergenic 65.0%
CGCCCAGCAATTCTCGCACC+GGG - Chr4:42927870-42927889 None:intergenic 65.0%
CGTGGTAGGGGCTGCAGTTG+AGG - Chr4:42935004-42935023 None:intergenic 65.0%
GACTGTGGCCCTTACCGCCA+TGG - Chr4:42927717-42927736 None:intergenic 65.0%
GCAGTAGAATCCCCCGGGGT+TGG + Chr4:42928859-42928878 MsG0480020527.01.T01:CDS 65.0%
GCCCAGCAATTCTCGCACCG+GGG - Chr4:42927869-42927888 None:intergenic 65.0%
GGATCCTTAGCCGCCGCTGA+AGG - Chr4:42934472-42934491 None:intergenic 65.0%
GGTGTTCTGCTAGGTGGGCG+CGG + Chr4:42930304-42930323 MsG0480020527.01.T01:CDS 65.0%
TCGCCGCTGGATCCGTATGC+TGG - Chr4:42927839-42927858 None:intergenic 65.0%
TGGGAGAGAACTCCGGGAGC+AGG + Chr4:42930268-42930287 MsG0480020527.01.T01:CDS 65.0%
TTCCCAGGGAAAAGGGGCCC+TGG + Chr4:42928658-42928677 MsG0480020527.01.T01:intron 65.0%
TTTCGTCGACGGCGGCGAAG+GGG - Chr4:42927805-42927824 None:intergenic 65.0%
! CCAGCGGCGAGCTTTTACCC+CGG + Chr4:42927849-42927868 MsG0480020527.01.T01:CDS 65.0%
! CCCTTTTCCCTGGGAACCGG+AGG - Chr4:42928654-42928673 None:intergenic 65.0%
! CGTCGGTGTCCGATGGGAAG+CGG - Chr4:42927742-42927761 None:intergenic 65.0%
! CTGCTAGGTGGGCGCGGTTT+TGG + Chr4:42930310-42930329 MsG0480020527.01.T01:CDS 65.0%
! GCTAGGTGGGCGCGGTTTTG+GGG + Chr4:42930312-42930331 MsG0480020527.01.T01:CDS 65.0%
! GGCCCCTTTTCCCTGGGAAC+CGG - Chr4:42928657-42928676 None:intergenic 65.0%
! GTCGGTGTCCGATGGGAAGC+GGG - Chr4:42927741-42927760 None:intergenic 65.0%
! GTTTTCGTCGACGGCGGCGA+AGG - Chr4:42927807-42927826 None:intergenic 65.0%
!! ATCCCCCGGGGTTGGCTTGT+TGG + Chr4:42928867-42928886 MsG0480020527.01.T01:CDS 65.0%
CCGGGGTAAAAGCTCGCCGC+TGG - Chr4:42927852-42927871 None:intergenic 70.0%
GCCGGAAGCTTCGCGTGCGT+CGG - Chr4:42927759-42927778 None:intergenic 70.0%
TTCGTCGACGGCGGCGAAGG+GGG - Chr4:42927804-42927823 None:intergenic 70.0%
! CGCGTGCGTCGGTGTCCGAT+GGG - Chr4:42927748-42927767 None:intergenic 70.0%
! TCGCGTGCGTCGGTGTCCGA+TGG - Chr4:42927749-42927768 None:intergenic 70.0%
!!! AGGTGGGCGCGGTTTTGGGG+CGG + Chr4:42930315-42930334 MsG0480020527.01.T01:CDS 70.0%
!!! GCGCGGTTTTGGGGCGGCAA+TGG + Chr4:42930321-42930340 MsG0480020527.01.T01:CDS 70.0%
! GACGGCGGCGAAGGGGGCGA+CGG - Chr4:42927798-42927817 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 42927599 42936492 42927599 ID=MsG0480020527.01;Name=MsG0480020527.01
Chr4 mRNA 42927599 42936492 42927599 ID=MsG0480020527.01.T01;Parent=MsG0480020527.01;Name=MsG0480020527.01.T01;_AED=0.34;_eAED=0.40;_QI=117|0.75|0.82|1|1|1|17|432|839
Chr4 exon 42927599 42928046 42927599 ID=MsG0480020527.01.T01:exon:4650;Parent=MsG0480020527.01.T01
Chr4 exon 42928139 42928207 42928139 ID=MsG0480020527.01.T01:exon:4651;Parent=MsG0480020527.01.T01
Chr4 exon 42928665 42928775 42928665 ID=MsG0480020527.01.T01:exon:4652;Parent=MsG0480020527.01.T01
Chr4 exon 42928853 42928932 42928853 ID=MsG0480020527.01.T01:exon:4653;Parent=MsG0480020527.01.T01
Chr4 exon 42929091 42929181 42929091 ID=MsG0480020527.01.T01:exon:4654;Parent=MsG0480020527.01.T01
Chr4 exon 42929788 42929841 42929788 ID=MsG0480020527.01.T01:exon:4655;Parent=MsG0480020527.01.T01
Chr4 exon 42929924 42930090 42929924 ID=MsG0480020527.01.T01:exon:4656;Parent=MsG0480020527.01.T01
Chr4 exon 42930208 42930394 42930208 ID=MsG0480020527.01.T01:exon:4657;Parent=MsG0480020527.01.T01
Chr4 exon 42930509 42930654 42930509 ID=MsG0480020527.01.T01:exon:4658;Parent=MsG0480020527.01.T01
Chr4 exon 42930729 42930883 42930729 ID=MsG0480020527.01.T01:exon:4659;Parent=MsG0480020527.01.T01
Chr4 exon 42931803 42931884 42931803 ID=MsG0480020527.01.T01:exon:4660;Parent=MsG0480020527.01.T01
Chr4 exon 42931971 42932086 42931971 ID=MsG0480020527.01.T01:exon:4661;Parent=MsG0480020527.01.T01
Chr4 exon 42932994 42933092 42932994 ID=MsG0480020527.01.T01:exon:4662;Parent=MsG0480020527.01.T01
Chr4 exon 42934454 42934580 42934454 ID=MsG0480020527.01.T01:exon:4663;Parent=MsG0480020527.01.T01
Chr4 exon 42934839 42935116 42934839 ID=MsG0480020527.01.T01:exon:4664;Parent=MsG0480020527.01.T01
Chr4 exon 42935530 42935744 42935530 ID=MsG0480020527.01.T01:exon:4665;Parent=MsG0480020527.01.T01
Chr4 exon 42935849 42936492 42935849 ID=MsG0480020527.01.T01:exon:4666;Parent=MsG0480020527.01.T01
Chr4 five_prime_UTR 42927599 42927715 42927599 ID=MsG0480020527.01.T01:five_prime_utr;Parent=MsG0480020527.01.T01
Chr4 CDS 42927716 42928046 42927716 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42928139 42928207 42928139 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42928665 42928775 42928665 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42928853 42928932 42928853 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42929091 42929181 42929091 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42929788 42929841 42929788 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42929924 42930090 42929924 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42930208 42930394 42930208 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42930509 42930654 42930509 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42930729 42930883 42930729 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42931803 42931884 42931803 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42931971 42932086 42931971 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42932994 42933092 42932994 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42934454 42934580 42934454 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42934839 42935116 42934839 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42935530 42935744 42935530 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 CDS 42935849 42936060 42935849 ID=MsG0480020527.01.T01:cds;Parent=MsG0480020527.01.T01
Chr4 three_prime_UTR 42936061 42936492 42936061 ID=MsG0480020527.01.T01:three_prime_utr;Parent=MsG0480020527.01.T01
Gene Sequence

>MsG0480020527.01.T01

ATGGCGGTAAGGGCCACAGTCTCCCGCTTCCCATCGGACACCGACGCACGCGAAGCTTCCGGCCTATTATGGGGAGTAACCGTCGCCCCCTTCGCCGCCGTCGACGAAAACAACCAATCACCAGCATACGGATCCAGCGGCGAGCTTTTACCCCGGTGCGAGAATTGCTGGGCGTACTTCAACACCTACTGTGAACTCGAACAATGGTCGTGGGGTTGTTCTCTCTGCGGGAATCTCAATGGTCTTTCTTCTGAAGCTATTGAGCGGTATTCTCGTCCGCAATCTTGTGCTGAAATGATGTCTTCGTTTGTAGATCTTGAATTGCCGCAGGAAGAAGAGTCGTCTGGTGATGCTGCATTGCAAGCTTGTCCTGTTTATGTTGCTGTGGTTGACTTATCATGGAAAAGGGGCCCTGGTAATCCGGAGTTCAGCCGCAAGGTAAGCATCGCCTCGCCAAAAATTGTTCCACCCATGAATCGAACTCGGGTTCTCCCGAACGATTTGTCATTTGATAGTGGCAGTAGAATCCCCCGGGGTTGGCTTGTTGGTGTAGGCTTCGGACCTCAAACCGTGTTCCTATCAAGGTCTCAGGGTATGAGTCAAATAATTGAGCTTAGAAGTTCACACGTGCTAGATGCTAGTCCTAATGGGCCTGTAAATTTTAATGACGATGTAGTTGTGCCTTCCGAGGAGTTTCTGGAACTCACTAAAAGTGCATTGCTGGCAGCTTTGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACATTCAGCCATAAACTAGGACTGTATGATGTTCAAGGTCCAATACCTGTTGTGAAAAATGTTTTCATCCCTCCAGAGGGAACCTTATCAACTGAGCTTGAAGATGTCATGCCTTTGTTACAGTTTCTGGCTCCCGTGGACACTTGTAAGGACCGTATTGCATCTGCACTCGAAACACTTAGACCAACAACTTCATGGGAGAGAACTCCGGGAGCAGGTCAAGGAATGGATGGTGTTCTGCTAGGTGGGCGCGGTTTTGGGGCGGCAATGGAATCTCTCTGTAGTTATCTTGGATCTGAATATGGGAACACTTTTGCATTAGCTAGAGTCTTTGCATTCTTGTCTGGTCCTCCTGATTATGGAGCTGGACAATTGGACACAAGACGATATGGTGAGCAATATGCAAGCAAAAGGGAGGATGCAGATCGTGCTTTACTCCCGGAGCAGACACCATTTTATAAAGATCTGGCTGCTGTTGCTGTTCAAGCAGGTGTATGTGTTGACATATTTGCCGTAACAAATGAGTACACTGATTTGGCATCCCTAAAATTTCTGAGTATTGAAAGTGGGGGCTCCTTATTTTTTTATACAAGTACCGAGGATTCAACTTTGCCTCAGGACATGTATCGAATGCTGAGTAGGCCATATGCTTTTAGTTGTGTCCTGCGATTAAGAACCTCAACTGAATTTAAGCCTGGAAATTCGTATGGTCACTTCTTTCCAGATCCACAGTATGAAAATGTTCAACACGTCATATGCTGTGATTCTTATGCTACATATGCTTATGACTTTGTGTTTGAGAACAACGTTGGATTTTCAAGAAGTAAATCAGATGTTCCTACACTCCAGATTGCATTCCAGTACTCAGTTGTAGTTCCTCCTCAGGAGCTTTCCAATTCAGGAGGGGTCTCTACAAGCAGAACCAAGCATCATTCCCTTCAGCGGCGGCTAAGGATCCGAACAGTGCAGTTTGGCGTTGCTCAGAACATCAATGAACTTTACGACAGCTGTGATCCGGAAGTTGTTCTATCTTTGCTCGTGCACAAGGTTATACTTGCCTCTTTGGAGGAAGGAGTTCGGGAGGGTAGACTTTTGCTTCAAGAATGGCTAGTGATCCTTGTAGCTCAGTACAATGATGCTTATAAACTTGTTCAGTATAGCAATGGAAATTCAATAAGATCTCAGATTGATGTTGCCTTCTCTCAATGTCCTCAACTGCAGCCCCTACCACGCCTAATCTTTGCTCTCCTTCGAAACCCTCTTCTTCGCTTTCACGAAGAAGGTGTTCATCCTGATTATCGCATCTATCTTCAATGTCTGTTTAGTGCGTTGGAACCGAGTTCCCTTCATCGTGCTGTGTATCCAGTATTGACATCATATGCCACTCCAGACAAACAAGCATATCCTCGCCATTCCTTGAGTCGTGCTGCATTGCTTACCAGTGGCAGTCCAATATTTTTCCTGGATGCATTCACAATTCTGATTGTGTTTTATTCTTCAACTGCGGACCCAACACTTCCTTTTCCACCACCCCATGATTGTTTGTTAAGGACTACAATCAACAAGTTGAAGAAAGAGAGATGCATCACTCCTAAACTCATTTTTATTCAAGGAGGGCAGGATGATGCCTCAATTTTCGAGAACTTTCTGATTGAAGAGCAGGACGTTGATGGAAGCGGTCTTACAAGTGTGATGGGTTTTGTTTCCTTCCTTGAAGATATAACTGTGAAAGTTTTAGAATTCATAAAATAG
Protein sequence

>MsG0480020527.01.T01

MAVRATVSRFPSDTDAREASGLLWGVTVAPFAAVDENNQSPAYGSSGELLPRCENCWAYFNTYCELEQWSWGCSLCGNLNGLSSEAIERYSRPQSCAEMMSSFVDLELPQEEESSGDAALQACPVYVAVVDLSWKRGPGNPEFSRKVSIASPKIVPPMNRTRVLPNDLSFDSGSRIPRGWLVGVGFGPQTVFLSRSQGMSQIIELRSSHVLDASPNGPVNFNDDVVVPSEEFLELTKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPPEGTLSTELEDVMPLLQFLAPVDTCKDRIASALETLRPTTSWERTPGAGQGMDGVLLGGRGFGAAMESLCSYLGSEYGNTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKREDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFFYTSTEDSTLPQDMYRMLSRPYAFSCVLRLRTSTEFKPGNSYGHFFPDPQYENVQHVICCDSYATYAYDFVFENNVGFSRSKSDVPTLQIAFQYSVVVPPQELSNSGGVSTSRTKHHSLQRRLRIRTVQFGVAQNINELYDSCDPEVVLSLLVHKVILASLEEGVREGRLLLQEWLVILVAQYNDAYKLVQYSNGNSIRSQIDVAFSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSALEPSSLHRAVYPVLTSYATPDKQAYPRHSLSRAALLTSGSPIFFLDAFTILIVFYSSTADPTLPFPPPHDCLLRTTINKLKKERCITPKLIFIQGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITVKVLEFIK*