AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020802.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020802.01.T01 MTR_4g059450 70.179 446 30 7 174 552 144 553 0.0 560
MsG0480020802.01.T01 MTR_2g094180 57.363 455 89 8 174 560 122 539 6.84e-160 469
MsG0480020802.01.T01 MTR_2g101880 34.199 231 146 1 302 526 242 472 2.33e-42 159
MsG0480020802.01.T01 MTR_2g093500 35.294 187 115 1 346 526 286 472 4.37e-34 136
MsG0480020802.01.T01 MTR_3g088220 26.817 399 226 15 166 522 69 443 4.11e-26 112
MsG0480020802.01.T01 MTR_3g095940 72.000 50 13 1 78 126 94 143 6.79e-17 78.2
MsG0480020802.01.T01 MTR_7g112040 55.932 59 26 0 458 516 144 202 1.10e-14 76.3
MsG0480020802.01.T01 MTR_1g087520 50.000 58 29 0 458 515 149 206 1.36e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020802.01.T01 AT5G60640 54.860 463 104 8 166 560 139 564 1.00e-153 454
MsG0480020802.01.T01 AT5G60640 56.479 409 92 7 166 525 139 510 9.45e-140 416
MsG0480020802.01.T01 AT3G54960 49.149 470 133 9 166 567 135 566 2.81e-136 409
MsG0480020802.01.T01 AT3G54960 50.000 410 119 6 166 526 135 507 4.68e-123 372
MsG0480020802.01.T01 AT5G60640 45.395 456 94 11 166 560 139 500 3.10e-104 325
MsG0480020802.01.T01 AT5G60640 43.478 69 37 2 449 517 96 162 8.78e-11 65.1
MsG0480020802.01.T01 AT3G16110 28.954 411 228 13 167 539 112 496 2.08e-41 157
MsG0480020802.01.T01 AT1G52260 28.186 408 235 11 167 539 114 498 1.06e-40 155
MsG0480020802.01.T01 AT1G21750 28.878 419 224 16 166 539 66 455 9.33e-30 123
MsG0480020802.01.T01 AT1G21750 28.673 422 221 17 166 539 66 455 2.41e-29 122
MsG0480020802.01.T01 AT1G77510 27.820 399 221 15 166 522 65 438 6.40e-25 108
MsG0480020802.01.T01 AT2G47470 54.237 59 27 0 457 515 142 200 4.70e-16 79.0
MsG0480020802.01.T01 AT1G10240 35.965 114 72 1 53 165 475 588 6.42e-16 81.6
MsG0480020802.01.T01 AT1G10240 35.965 114 72 1 53 165 475 588 6.42e-16 81.6
MsG0480020802.01.T01 AT2G47470 54.237 59 27 0 457 515 142 200 8.03e-16 79.7
MsG0480020802.01.T01 AT2G47470 54.237 59 27 0 457 515 142 200 8.05e-16 79.3
MsG0480020802.01.T01 AT2G47470 54.237 59 27 0 457 515 142 200 8.44e-16 79.3

Find 124 sgRNAs with CRISPR-Local

Find 533 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAGATTATTTGGTCTTTC+TGG 0.067246 4:+48627755 MsG0480020802.01.T01:CDS
ACTCCTTAGTTGTAAGTTTC+TGG 0.095905 4:+48625188 MsG0480020802.01.T01:CDS
CCGCTGATAAAGTAAAATTT+TGG 0.106440 4:-48629328 None:intergenic
AATGATTCAGATTTGAATTA+AGG 0.194228 4:+48620606 None:intergenic
CTCTTTATCAAATGCAATTT+AGG 0.204339 4:+48625223 MsG0480020802.01.T01:CDS
ATCTGAAACTAAAGTTGTTT+TGG 0.206264 4:+48625156 MsG0480020802.01.T01:CDS
ATAGAATGACTTACACTTTC+GGG 0.214033 4:-48628164 None:intergenic
GAGGAGAAACTGAACCATTT+TGG 0.275627 4:+48625669 MsG0480020802.01.T01:CDS
AAAGCCTGTTGCAGATTATT+TGG 0.278346 4:+48627746 MsG0480020802.01.T01:CDS
GGATGAATTGTGAGAGTTAA+AGG 0.285179 4:+48629062 MsG0480020802.01.T01:three_prime_UTR
CTTCAACTTAAGAACATTGT+AGG 0.289278 4:-48622497 None:intergenic
AGTACCATAATTCTCTAATT+AGG 0.289351 4:+48621589 MsG0480020802.01.T01:CDS
ACATATGAAGATGATGAATA+TGG 0.290862 4:+48620701 MsG0480020802.01.T01:CDS
GGCTCATGAGTATAATGTTC+AGG 0.292353 4:+48624603 MsG0480020802.01.T01:CDS
CCAATTACCTGTTTCTTGAT+TGG 0.297414 4:-48625892 None:intergenic
TTAGAAGTTGAGGTTGGTTC+TGG 0.302208 4:-48628982 None:intergenic
TTGTCCTAATTAGAGAATTA+TGG 0.303893 4:-48621593 None:intergenic
TGACTTACACTTTCGGGAAT+AGG 0.324123 4:-48628158 None:intergenic
CTAAATTGCATTTGATAAAG+AGG 0.332716 4:-48625222 None:intergenic
TTTGCAGCATGTTCCTCAAT+AGG 0.334456 4:-48621621 None:intergenic
GAAGAAAGATGGTGTTGTTT+TGG 0.355969 4:+48624550 MsG0480020802.01.T01:CDS
TGAAAGTCCAATCAAGAAAC+AGG 0.369337 4:+48625885 MsG0480020802.01.T01:CDS
GTTGGTTCTGGAGTTGGAAT+GGG 0.378237 4:-48628970 None:intergenic
AGATGTCAAGCGCCCTGCTT+TGG 0.378741 4:+48625629 MsG0480020802.01.T01:intron
GGTGACCATTGACAATATTA+AGG 0.380026 4:+48627949 MsG0480020802.01.T01:CDS
AAAGACAAATAGAAAAGAAA+AGG 0.380785 4:+48629206 MsG0480020802.01.T01:three_prime_UTR
TTCAATGCTACGAAGATGTT+TGG 0.384407 4:-48628476 None:intergenic
AATAGAATGACTTACACTTT+CGG 0.385842 4:-48628165 None:intergenic
TCAACTTCTAAAACCGATAG+TGG 0.386462 4:+48628994 MsG0480020802.01.T01:CDS
ATTTGTTGTTCCATCCATCT+TGG 0.386845 4:-48628512 None:intergenic
GTTGAGGTTGGTTCTGGAGT+TGG 0.391372 4:-48628976 None:intergenic
GATCTTTGTTCACGTGGAAA+TGG 0.394416 4:+48627707 MsG0480020802.01.T01:CDS
AACAAGAAAACAAACCAAAA+TGG 0.398014 4:-48625683 None:intergenic
TTCTTGAGCAAGACCAAAGC+AGG 0.398443 4:-48625642 None:intergenic
GGTTGGTTCTGGAGTTGGAA+TGG 0.404942 4:-48628971 None:intergenic
AACATTAGGTTTATGCTCCT+TGG 0.412196 4:+48628410 MsG0480020802.01.T01:intron
GTCGCCGCCGCAGCATACTC+CGG 0.423465 4:-48624521 None:intergenic
GAACAACAAATGAGCATCCT+AGG 0.440720 4:+48628524 MsG0480020802.01.T01:CDS
AAGTTGAAGATAATGAATAA+TGG 0.442702 4:+48622511 MsG0480020802.01.T01:CDS
TAACTTCGATGAAATTGTCT+TGG 0.457227 4:+48628282 MsG0480020802.01.T01:CDS
TAGACGACCACCATCAACTT+TGG 0.465253 4:-48621748 None:intergenic
ATCCATCTTGGCTACAACAA+TGG 0.468960 4:-48628500 None:intergenic
AAGACCAAATAATCTGCAAC+AGG 0.469656 4:-48627750 None:intergenic
GTTGACCAACGGAAGCTTGT+TGG 0.471857 4:-48625830 None:intergenic
GCTCATGAGTATAATGTTCA+GGG 0.473981 4:+48624604 MsG0480020802.01.T01:CDS
GGACACTTCTATTTATAAAG+AGG 0.476575 4:+48629083 MsG0480020802.01.T01:three_prime_UTR
CGACATCATACCAAAGTTGA+TGG 0.478069 4:+48621738 MsG0480020802.01.T01:CDS
CTTCTATTTATAAAGAGGTA+TGG 0.480520 4:+48629088 MsG0480020802.01.T01:three_prime_UTR
ATAGGATCTGACTTGAGAAA+AGG 0.480999 4:-48628140 None:intergenic
CTTGTTGGATGATACAAAGT+TGG 0.484049 4:-48625815 None:intergenic
GGAGTATGCTGCGGCGGCGA+CGG 0.485513 4:+48624523 MsG0480020802.01.T01:CDS
ATGCTTCGGTGGAAATGAAT+TGG 0.486040 4:+48624582 MsG0480020802.01.T01:CDS
AATAGAAAAGAAAAGGGAAG+TGG 0.486792 4:+48629213 MsG0480020802.01.T01:three_prime_UTR
TAAGAAATAGTGCTAGTGAT+TGG 0.489143 4:+48620648 MsG0480020802.01.T01:CDS
TTTGGCTAAGGTGGATGCTT+CGG 0.489243 4:+48624568 MsG0480020802.01.T01:CDS
CTTGTTGTATGTTGGTTCCA+AGG 0.489358 4:-48628449 None:intergenic
TTTGGTCTTGCTCAAGAAAG+AGG 0.490488 4:+48625647 MsG0480020802.01.T01:CDS
TAAATTGCATTTGATAAAGA+GGG 0.490862 4:-48625221 None:intergenic
TGGATTAACTCAAACGCATA+TGG 0.491586 4:-48621654 None:intergenic
TGGATAGGATCACAAAGGGT+TGG 0.496334 4:+48622429 MsG0480020802.01.T01:intron
AATCCAGAAACTTACAACTA+AGG 0.497429 4:-48625191 None:intergenic
TGTATGTTGGTTCCAAGGCT+TGG 0.499218 4:-48628444 None:intergenic
ATAATTGTTACCTGTCTGAA+TGG 0.504420 4:-48621709 None:intergenic
TCGCCGCCGCAGCATACTCC+GGG 0.507026 4:-48624520 None:intergenic
CTAACTTGATGGCAGAATGA+TGG 0.514211 4:+48628235 MsG0480020802.01.T01:intron
GTGTGGCCATTGCCAAGCCT+TGG 0.514241 4:+48628432 MsG0480020802.01.T01:CDS
GAGTACCTTAATATTGTCAA+TGG 0.518049 4:-48627954 None:intergenic
TAGGTTTATGCTCCTTGGTG+TGG 0.518050 4:+48628415 MsG0480020802.01.T01:intron
CCACATCAAGAACCTCAGCC+TGG 0.518342 4:+48620746 MsG0480020802.01.T01:CDS
AAATATGCTGCCATTCAGAC+AGG 0.519399 4:+48621699 MsG0480020802.01.T01:CDS
GTCTATTAAAGTGTGGGTGA+TGG 0.520064 4:+48625465 MsG0480020802.01.T01:intron
TATTTGTCTTTGGCCAGGCA+AGG 0.521285 4:-48629194 None:intergenic
AAGACAAATAGAAAAGAAAA+GGG 0.524489 4:+48629207 MsG0480020802.01.T01:three_prime_UTR
ATCCATTGTTGTAGCCAAGA+TGG 0.526140 4:+48628498 MsG0480020802.01.T01:CDS
TAGACAATTCAATCTCATGT+TGG 0.528559 4:-48621674 None:intergenic
GTCGAAGGATGTTCTACTTG+AGG 0.532250 4:+48628309 MsG0480020802.01.T01:CDS
GACGTCAGAACTCCCACTAT+CGG 0.533010 4:-48629007 None:intergenic
TTGGCGAGCTTGTTGTATGT+TGG 0.538009 4:-48628457 None:intergenic
TCGATATGTAGTACTAGTCC+AGG 0.542768 4:-48620764 None:intergenic
ATTTGTCTTTGGCCAGGCAA+GGG 0.548492 4:-48629193 None:intergenic
ACTTGCATTCACAGGAAATG+AGG 0.555706 4:+48627898 MsG0480020802.01.T01:intron
TTCTTGGATAGGATCACAAA+GGG 0.557354 4:+48622425 MsG0480020802.01.T01:intron
GCGACGGAGTTGAAGAAAGA+TGG 0.557986 4:+48624539 MsG0480020802.01.T01:CDS
TGTATACAACATAACTACAT+TGG 0.558788 4:+48625111 MsG0480020802.01.T01:CDS
AGCTGAAGAAACTAATACAC+AGG 0.565204 4:-48629256 None:intergenic
TTGGTTCCAAGGCTTGGCAA+TGG 0.565443 4:-48628438 None:intergenic
CCAGGCTGAGGTTCTTGATG+TGG 0.565836 4:-48620746 None:intergenic
GTCAAAATTAGACATCAAGC+AGG 0.568777 4:+48621543 MsG0480020802.01.T01:CDS
GAAATGGATAATGAAGATGT+TGG 0.572752 4:+48627723 MsG0480020802.01.T01:CDS
GGCTAAGGTGGATGCTTCGG+TGG 0.574541 4:+48624571 MsG0480020802.01.T01:CDS
TGAAGATAATGAATAATGGA+TGG 0.578448 4:+48622515 MsG0480020802.01.T01:CDS
ATTGTTGTAGCCAAGATGGA+TGG 0.578577 4:+48628502 MsG0480020802.01.T01:CDS
GAGTAGCAGCACAGACGTGA+AGG 0.584656 4:+48629041 MsG0480020802.01.T01:CDS
AACTTACAACTAAGGAGTCA+AGG 0.587094 4:-48625183 None:intergenic
ATCATCCAACAAGCTTCCGT+TGG 0.587946 4:+48625825 MsG0480020802.01.T01:CDS
GCAGCTGATCTTTGTTCACG+TGG 0.588271 4:+48627701 MsG0480020802.01.T01:intron
GGATTGATGCATGTTTCTTG+AGG 0.600573 4:-48628949 None:intergenic
AGCTGCAGCATCAAAACTTG+AGG 0.603996 4:+48625546 MsG0480020802.01.T01:CDS
TAGCCCGGAGTATGCTGCGG+CGG 0.605695 4:+48624517 MsG0480020802.01.T01:intron
TAGTGGGAGTTCTGACGTCA+AGG 0.608978 4:+48629011 MsG0480020802.01.T01:CDS
GGTCTTGCTCAAGAAAGAGG+AGG 0.609245 4:+48625650 MsG0480020802.01.T01:CDS
AGATGGAAAATTTGTAAAAG+CGG 0.609829 4:+48625786 MsG0480020802.01.T01:intron
AAATGAGCATCCTAGGGCAA+AGG 0.610225 4:+48628531 MsG0480020802.01.T01:CDS
AGATTACTGTTGATGTTGAT+CGG 0.613974 4:+48628903 MsG0480020802.01.T01:intron
CTCAGCAAAGAAAGTTGCAG+TGG 0.621234 4:+48629145 MsG0480020802.01.T01:three_prime_UTR
TGTAGTACTAGTCCAGGCTG+AGG 0.623528 4:-48620758 None:intergenic
AACAACAAATGAGCATCCTA+GGG 0.624661 4:+48628525 MsG0480020802.01.T01:CDS
GCATTCACAGGAAATGAGGA+TGG 0.631256 4:+48627902 MsG0480020802.01.T01:intron
GCAGCATCAAAACTTGAGGA+TGG 0.631596 4:+48625550 MsG0480020802.01.T01:CDS
GACATGGATAAAGAAGAGAC+AGG 0.633451 4:+48625082 MsG0480020802.01.T01:CDS
TGATGTTGATCGGACAGTGG+TGG 0.637318 4:+48628913 MsG0480020802.01.T01:CDS
AATTGTCTTGGATGAGTCGA+AGG 0.648662 4:+48628294 MsG0480020802.01.T01:CDS
GTTCTTGGATAGGATCACAA+AGG 0.649286 4:+48622424 MsG0480020802.01.T01:intron
CTTTAGCCCGGAGTATGCTG+CGG 0.649985 4:+48624514 MsG0480020802.01.T01:intron
GCTTGGCAATGGCCACACCA+AGG 0.650720 4:-48628427 None:intergenic
CAACTTCTAAAACCGATAGT+GGG 0.650733 4:+48628995 MsG0480020802.01.T01:CDS
GATTCAGTCTATTAAAGTGT+GGG 0.658254 4:+48625459 MsG0480020802.01.T01:intron
GATAAAGAAGAGACAGGACC+TGG 0.658989 4:+48625088 MsG0480020802.01.T01:CDS
GTAGTTATGTTGTATACACC+AGG 0.661692 4:-48625106 None:intergenic
TCTTGAGCAAGACCAAAGCA+GGG 0.663604 4:-48625641 None:intergenic
GTAGAGAAGCTATAGTGACA+TGG 0.675835 4:+48625066 MsG0480020802.01.T01:intron
CATCATACCAAAGTTGATGG+TGG 0.683172 4:+48621741 MsG0480020802.01.T01:CDS
TGATTCAGTCTATTAAAGTG+TGG 0.690377 4:+48625458 MsG0480020802.01.T01:intron
TGTTGATGTTGATCGGACAG+TGG 0.692576 4:+48628910 MsG0480020802.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - Chr4:48623391-48623372 None:intergenic 0.0%
!! ATATATATATATATATATAT+GGG + Chr4:48623372-48623391 MsG0480020802.01.T01:intron 0.0%
!! ATATATATATATATATATAT+GGG - Chr4:48623391-48623372 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + Chr4:48623373-48623392 MsG0480020802.01.T01:intron 0.0%
!! TATATATATATATATATATA+TGG - Chr4:48623392-48623373 None:intergenic 0.0%
!! ACTTAATATTAATTAAAAAG+TGG - Chr4:48626623-48626642 None:intergenic 10.0%
!! ATATATATATATATATATGG+GGG - Chr4:48623405-48623386 None:intergenic 10.0%
!! GTATTGTTAAAAAAAAAAAA+AGG - Chr4:48627622-48627641 None:intergenic 10.0%
!! TAATTAATTGTTATAACATT+AGG + Chr4:48628396-48628415 MsG0480020802.01.T01:intron 10.0%
!!! ATATAATGGATTTAATTAAA+AGG - Chr4:48625377-48625396 None:intergenic 10.0%
!!! ATTTTTTTTTTGACAATAAA+TGG + Chr4:48622945-48622964 MsG0480020802.01.T01:intron 10.0%
!!! GTTATTTAATTTTCTTAAAA+TGG + Chr4:48626700-48626719 MsG0480020802.01.T01:intron 10.0%
!!! TATTAGCTTTAATATTTATA+GGG + Chr4:48626935-48626954 MsG0480020802.01.T01:intron 10.0%
!!! TTATTAACTATTTGATTTTA+TGG + Chr4:48622402-48622421 MsG0480020802.01.T01:intron 10.0%
!!! TTATTAGCTTTAATATTTAT+AGG + Chr4:48626934-48626953 MsG0480020802.01.T01:intron 10.0%
!! AAAAAAAAAAAAGGATTCTT+TGG - Chr4:48627613-48627632 None:intergenic 15.0%
!! AAAAAAAAAAAGGATTCTTT+GGG - Chr4:48627612-48627631 None:intergenic 15.0%
!! ATTTAAATGTCTATTTAGTA+TGG + Chr4:48625270-48625289 MsG0480020802.01.T01:intron 15.0%
!! CAAAATTAATTCATTAGATA+AGG - Chr4:48623844-48623863 None:intergenic 15.0%
!! CATTGAATATATAATGTATT+TGG - Chr4:48623762-48623781 None:intergenic 15.0%
!!! AACATATTTTATTTGTGAAA+TGG - Chr4:48623037-48623056 None:intergenic 15.0%
!!! ATTTTTTTGTTACATAACTT+TGG - Chr4:48622847-48622866 None:intergenic 15.0%
!!! TCAAGATAATTTGATTTATT+TGG + Chr4:48622100-48622119 MsG0480020802.01.T01:intron 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG - Chr4:48624795-48624814 None:intergenic 15.0%
!!! TTCAATATTTTTCTTTTGTT+TGG - Chr4:48622304-48622323 None:intergenic 15.0%
!! AAAAAAAAAAGGATTCTTTG+GGG - Chr4:48627611-48627630 None:intergenic 20.0%
!! AAAAATCCAAAACTTAACAT+GGG - Chr4:48628637-48628656 None:intergenic 20.0%
!! AAAGACAAATAGAAAAGAAA+AGG + Chr4:48629206-48629225 MsG0480020802.01.T01:three_prime_UTR 20.0%
!! AAAGATGAAACTTTGAATAT+AGG + Chr4:48627874-48627893 MsG0480020802.01.T01:intron 20.0%
!! AAATTAAATAACAAAGAGAC+AGG - Chr4:48626692-48626711 None:intergenic 20.0%
!! AAATTGATTGTTCTCAATTA+CGG - Chr4:48624451-48624470 None:intergenic 20.0%
!! AAGACAAATAGAAAAGAAAA+GGG + Chr4:48629207-48629226 MsG0480020802.01.T01:three_prime_UTR 20.0%
!! AAGCTAATAATAATAGAAAG+AGG - Chr4:48626924-48626943 None:intergenic 20.0%
!! AAGTTGAAGATAATGAATAA+TGG + Chr4:48622511-48622530 MsG0480020802.01.T01:CDS 20.0%
!! AATAATCATTACTTATGACA+AGG + Chr4:48623201-48623220 MsG0480020802.01.T01:intron 20.0%
!! AATCATCTATAGATTCTAAA+TGG - Chr4:48621215-48621234 None:intergenic 20.0%
!! ACAAAAAAATGCAAATAAAG+TGG + Chr4:48626188-48626207 MsG0480020802.01.T01:intron 20.0%
!! ACAAGTATTTATATACATGA+GGG - Chr4:48627033-48627052 None:intergenic 20.0%
!! ACAATTAGAACTTACTTATT+AGG - Chr4:48622345-48622364 None:intergenic 20.0%
!! ATTCTGATGATTTACAAATA+TGG - Chr4:48627437-48627456 None:intergenic 20.0%
!! CAAATCTATATAATTTAAGC+TGG - Chr4:48627125-48627144 None:intergenic 20.0%
!! CTTAAATTTAAATGATGACT+AGG - Chr4:48627562-48627581 None:intergenic 20.0%
!! GAAAAGGAAATTATTACTTT+GGG - Chr4:48627787-48627806 None:intergenic 20.0%
!! GTAATAATATATTTGTGAGT+AGG + Chr4:48621509-48621528 MsG0480020802.01.T01:intron 20.0%
!! TAAATGTAACTATATTTGTC+TGG + Chr4:48624822-48624841 MsG0480020802.01.T01:intron 20.0%
!! TAAATTGAGGCATAATAAAT+TGG - Chr4:48623906-48623925 None:intergenic 20.0%
!! TAAATTGCATTTGATAAAGA+GGG - Chr4:48625224-48625243 None:intergenic 20.0%
!! TAACACAAAAGATTAAAATG+TGG - Chr4:48624713-48624732 None:intergenic 20.0%
!! TACAAGTATTTATATACATG+AGG - Chr4:48627034-48627053 None:intergenic 20.0%
!! TCGTATATATAAAAGATACA+CGG + Chr4:48625343-48625362 MsG0480020802.01.T01:intron 20.0%
!! TTAAAACACAACAATATTAG+AGG - Chr4:48625987-48626006 None:intergenic 20.0%
!! TTTACTGTTTATTATAACTC+TGG + Chr4:48626216-48626235 MsG0480020802.01.T01:intron 20.0%
!!! AAGTCTTTATGTTTTTATTC+AGG + Chr4:48628082-48628101 MsG0480020802.01.T01:intron 20.0%
!!! AATTAAAAAGTGGTTAGTTT+CGG - Chr4:48626613-48626632 None:intergenic 20.0%
!!! AATTCTTTGCTTTGTTTATA+TGG + Chr4:48625300-48625319 MsG0480020802.01.T01:intron 20.0%
!!! AGTTAAGTTTTGCTTTTAAA+TGG + Chr4:48624995-48625014 MsG0480020802.01.T01:intron 20.0%
!!! ATAAGCAAAAATGTACTTTT+AGG - Chr4:48623787-48623806 None:intergenic 20.0%
!!! ATATTGTTGTGTTTTAAACT+TGG + Chr4:48625990-48626009 MsG0480020802.01.T01:intron 20.0%
!!! TAATCATTTTTTTGTTAGAC+AGG - Chr4:48620944-48620963 None:intergenic 20.0%
!!! TAGAAATTTACTTAGTTCTT+TGG - Chr4:48624681-48624700 None:intergenic 20.0%
!!! TATGTTTAACTAGATTTGTT+TGG - Chr4:48623661-48623680 None:intergenic 20.0%
!!! TTATTAAGATCACATTTTCA+AGG - Chr4:48625963-48625982 None:intergenic 20.0%
!!! TTATTAGATTTTATGTCCTA+AGG + Chr4:48626555-48626574 MsG0480020802.01.T01:intron 20.0%
!!! TTATTTTAGCAACTTGTTAT+AGG + Chr4:48621455-48621474 MsG0480020802.01.T01:intron 20.0%
!!! TTTTCTTTTCTATTTGTCTT+TGG - Chr4:48629207-48629226 None:intergenic 20.0%
! AACAAGAAAACAAACCAAAA+TGG - Chr4:48625686-48625705 None:intergenic 25.0%
! AACATCATAACCATCATTAT+TGG - Chr4:48622146-48622165 None:intergenic 25.0%
! AAGAAAATAGAACTTGAAAC+TGG - Chr4:48628350-48628369 None:intergenic 25.0%
! AATAGAATGACTTACACTTT+CGG - Chr4:48628168-48628187 None:intergenic 25.0%
! AATATCAACAAATGGTGAAT+TGG + Chr4:48622769-48622788 MsG0480020802.01.T01:intron 25.0%
! AATCATTAAAGACAAAAGAG+AGG + Chr4:48622014-48622033 MsG0480020802.01.T01:intron 25.0%
! ACATATGAAGATGATGAATA+TGG + Chr4:48620701-48620720 MsG0480020802.01.T01:CDS 25.0%
! ACTTTAAACAGGAATTTCAT+AGG + Chr4:48621184-48621203 MsG0480020802.01.T01:intron 25.0%
! AGACATTTAAATCACAAAAG+TGG - Chr4:48625262-48625281 None:intergenic 25.0%
! AGATGGAAAATTTGTAAAAG+CGG + Chr4:48625786-48625805 MsG0480020802.01.T01:intron 25.0%
! AGTACCATAATTCTCTAATT+AGG + Chr4:48621589-48621608 MsG0480020802.01.T01:CDS 25.0%
! ATCATTAAAGACAAAAGAGA+GGG + Chr4:48622015-48622034 MsG0480020802.01.T01:intron 25.0%
! ATTGGACTTTCAAAAATTAC+GGG - Chr4:48625877-48625896 None:intergenic 25.0%
! ATTGTAATTAAAGTGACCTT+GGG + Chr4:48628605-48628624 MsG0480020802.01.T01:intron 25.0%
! CAAAAGATTAAAATGTGGAT+TGG - Chr4:48624708-48624727 None:intergenic 25.0%
! CAAGTATTTATATACATGAG+GGG - Chr4:48627032-48627051 None:intergenic 25.0%
! CATACAAATTAGATCATCTA+CGG - Chr4:48628866-48628885 None:intergenic 25.0%
! CATATAGTCAAATGCAATAA+TGG + Chr4:48621947-48621966 MsG0480020802.01.T01:intron 25.0%
! CATTCAATGCTTAATGTATT+TGG + Chr4:48623724-48623743 MsG0480020802.01.T01:intron 25.0%
! CTAAATTGCATTTGATAAAG+AGG - Chr4:48625225-48625244 None:intergenic 25.0%
! CTCTTTATCAAATGCAATTT+AGG + Chr4:48625223-48625242 MsG0480020802.01.T01:CDS 25.0%
! CTTCTATTTATAAAGAGGTA+TGG + Chr4:48629088-48629107 MsG0480020802.01.T01:three_prime_UTR 25.0%
! CTTTAAACAGGAATTTCATA+GGG + Chr4:48621185-48621204 MsG0480020802.01.T01:intron 25.0%
! GAAAAATCCAAAACTTAACA+TGG - Chr4:48628638-48628657 None:intergenic 25.0%
! GAATAGCAAAAAACATCAAT+TGG + Chr4:48625726-48625745 MsG0480020802.01.T01:intron 25.0%
! GACAAATAGTCTCTATATAA+TGG - Chr4:48625391-48625410 None:intergenic 25.0%
! GATTGGACTTTCAAAAATTA+CGG - Chr4:48625878-48625897 None:intergenic 25.0%
! GGAAAAGGAAATTATTACTT+TGG - Chr4:48627788-48627807 None:intergenic 25.0%
! GTAATAATTTGAGAAAATGG+TGG + Chr4:48624881-48624900 MsG0480020802.01.T01:intron 25.0%
! GTACAGAAAATATCAACAAA+TGG + Chr4:48622761-48622780 MsG0480020802.01.T01:intron 25.0%
! TAATATATTTGTGAGTAGGT+TGG + Chr4:48621513-48621532 MsG0480020802.01.T01:intron 25.0%
! TCGTTTAATATTCACTTACA+GGG - Chr4:48628794-48628813 None:intergenic 25.0%
! TGAATGTAACTATATATGTC+TGG + Chr4:48624908-48624927 MsG0480020802.01.T01:intron 25.0%
! TGTATACAACATAACTACAT+TGG + Chr4:48625111-48625130 MsG0480020802.01.T01:CDS 25.0%
! TTCATTTGTTTATCATGCTA+TGG + Chr4:48628003-48628022 MsG0480020802.01.T01:intron 25.0%
! TTGTCCTAATTAGAGAATTA+TGG - Chr4:48621596-48621615 None:intergenic 25.0%
!! AAGGTCACTTTAATTACAAT+GGG - Chr4:48628605-48628624 None:intergenic 25.0%
!! AATTTTACCAAAATTTCCCT+TGG + Chr4:48627379-48627398 MsG0480020802.01.T01:intron 25.0%
!! AGTTTTCTAACTTTTGTTGA+AGG + Chr4:48621009-48621028 MsG0480020802.01.T01:intron 25.0%
!! CAAAATGCATGTTTTGTATT+TGG - Chr4:48621101-48621120 None:intergenic 25.0%
!! CATGGAAATTCAATTTTCTT+TGG + Chr4:48620835-48620854 MsG0480020802.01.T01:intron 25.0%
!! CCAAAATTTTACTTTATCAG+CGG + Chr4:48629328-48629347 MsG0480020802.01.T01:three_prime_UTR 25.0%
!! CCATTTTCTCAAATTATTAC+CGG - Chr4:48624881-48624900 None:intergenic 25.0%
!! CGCTGATAAAGTAAAATTTT+GGG - Chr4:48629330-48629349 None:intergenic 25.0%
!! TAACACATTTTCTAACTTGA+TGG + Chr4:48628224-48628243 MsG0480020802.01.T01:intron 25.0%
!! TAGATGATCTAATTTGTATG+TGG + Chr4:48628866-48628885 MsG0480020802.01.T01:intron 25.0%
!! TGAAGATAATGAATAATGGA+TGG + Chr4:48622515-48622534 MsG0480020802.01.T01:CDS 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + Chr4:48623796-48623815 MsG0480020802.01.T01:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - Chr4:48623815-48623796 None:intergenic 25.0%
!!! AAGAAAGAGAAATGGTTTTT+TGG + Chr4:48623278-48623297 MsG0480020802.01.T01:intron 25.0%
!!! AAGATTTTAACTTACTCCAT+TGG - Chr4:48626493-48626512 None:intergenic 25.0%
!!! AAGTTTTGCTTTTAAATGGT+GGG + Chr4:48624999-48625018 MsG0480020802.01.T01:intron 25.0%
!!! AATCTTGTTTTTGTAATCAC+TGG + Chr4:48626507-48626526 MsG0480020802.01.T01:intron 25.0%
!!! ATCTGAAACTAAAGTTGTTT+TGG + Chr4:48625156-48625175 MsG0480020802.01.T01:CDS 25.0%
!!! ATCTTGTTTTTGTAATCACT+GGG + Chr4:48626508-48626527 MsG0480020802.01.T01:intron 25.0%
!!! ATGTTTTTATTCAGGCATTT+GGG + Chr4:48628090-48628109 MsG0480020802.01.T01:intron 25.0%
!!! CTATTTGATTTTATGGTTCT+TGG + Chr4:48622409-48622428 MsG0480020802.01.T01:intron 25.0%
!!! GAAAAGGAAGATATTTTGAT+GGG - Chr4:48621890-48621909 None:intergenic 25.0%
!!! GACTAGGAGTTTTTTTTTAT+CGG - Chr4:48627546-48627565 None:intergenic 25.0%
!!! GAGATATATTGACTTTAAAC+AGG + Chr4:48621173-48621192 MsG0480020802.01.T01:intron 25.0%
!!! GCATTTTTTTGTGAAACAAA+AGG - Chr4:48626180-48626199 None:intergenic 25.0%
!!! TAAGTTTTGCTTTTAAATGG+TGG + Chr4:48624998-48625017 MsG0480020802.01.T01:intron 25.0%
!!! TAGACAAATTTTAGTTTGCA+AGG + Chr4:48626287-48626306 MsG0480020802.01.T01:intron 25.0%
!!! TATGTTTTTATTCAGGCATT+TGG + Chr4:48628089-48628108 MsG0480020802.01.T01:intron 25.0%
!!! TCTGAAACTAAAGTTGTTTT+GGG + Chr4:48625157-48625176 MsG0480020802.01.T01:CDS 25.0%
!!! TGTAAAGAATTTGAGTTTTC+TGG + Chr4:48621810-48621829 MsG0480020802.01.T01:intron 25.0%
!!! TGTTTTTGAAGAAAGAGAAA+TGG + Chr4:48623270-48623289 MsG0480020802.01.T01:intron 25.0%
!!! TTCTACTTGAGGTTTAATTT+TGG + Chr4:48628320-48628339 MsG0480020802.01.T01:intron 25.0%
!!! TTTGACTGATTTTGTAAATC+AGG + Chr4:48621425-48621444 MsG0480020802.01.T01:intron 25.0%
!!! TTTTTTATCGGATTATGCAT+AGG - Chr4:48627534-48627553 None:intergenic 25.0%
AAAATAGAACTTGAAACTGG+TGG - Chr4:48628347-48628366 None:intergenic 30.0%
AAAGTGAAAATCACACCTTA+AGG + Chr4:48623521-48623540 MsG0480020802.01.T01:intron 30.0%
AAAGTTAGGTTATGTAGAAC+CGG - Chr4:48628841-48628860 None:intergenic 30.0%
AAATATCAAAGATTCAGCAC+AGG - Chr4:48627476-48627495 None:intergenic 30.0%
AACCATCATTATTGGAACAT+CGG - Chr4:48622138-48622157 None:intergenic 30.0%
AATAGAAAAGAAAAGGGAAG+TGG + Chr4:48629213-48629232 MsG0480020802.01.T01:three_prime_UTR 30.0%
AATAGTCCTTCAAATAAGCT+AGG - Chr4:48621327-48621346 None:intergenic 30.0%
AATCCAGAAACTTACAACTA+AGG - Chr4:48625194-48625213 None:intergenic 30.0%
AATTATCTGTGGAGATGTTT+AGG + Chr4:48627212-48627231 MsG0480020802.01.T01:intron 30.0%
AATTATTACCGGTATCAATG+TGG - Chr4:48624870-48624889 None:intergenic 30.0%
ACACACACTTAAGATATAGT+TGG - Chr4:48623337-48623356 None:intergenic 30.0%
ACCCAGTATAAACTAGATTT+CGG + Chr4:48628558-48628577 MsG0480020802.01.T01:intron 30.0%
AGAAGAAATCTTCATTCAGA+TGG + Chr4:48620878-48620897 MsG0480020802.01.T01:intron 30.0%
AGATTACTGTTGATGTTGAT+CGG + Chr4:48628903-48628922 MsG0480020802.01.T01:intron 30.0%
AGTGGATCATGATAATAGAA+TGG + Chr4:48626252-48626271 MsG0480020802.01.T01:intron 30.0%
AGTTTGGCAAACACTATAAT+AGG - Chr4:48626349-48626368 None:intergenic 30.0%
ATAAAAGACACCTTCACAAA+AGG - Chr4:48623425-48623444 None:intergenic 30.0%
ATAATTGTTACCTGTCTGAA+TGG - Chr4:48621712-48621731 None:intergenic 30.0%
ATAGAATGACTTACACTTTC+GGG - Chr4:48628167-48628186 None:intergenic 30.0%
ATTTGGTATAATACCCACTT+GGG + Chr4:48626730-48626749 MsG0480020802.01.T01:intron 30.0%
CACATTATGACAGAAAAAGA+AGG - Chr4:48625503-48625522 None:intergenic 30.0%
CAGTAGAAATATGTCATTGT+CGG - Chr4:48627667-48627686 None:intergenic 30.0%
CATTGTAATTAAAGTGACCT+TGG + Chr4:48628604-48628623 MsG0480020802.01.T01:intron 30.0%
CCATAGTTAAAGATCATGAT+AGG + Chr4:48626973-48626992 MsG0480020802.01.T01:intron 30.0%
CCGGTAATAATTTGAGAAAA+TGG + Chr4:48624878-48624897 MsG0480020802.01.T01:intron 30.0%
CCTATCATGATCTTTAACTA+TGG - Chr4:48626976-48626995 None:intergenic 30.0%
CTTAAAATGGATGCACTATT+TGG + Chr4:48626713-48626732 MsG0480020802.01.T01:intron 30.0%
CTTCAACTTAAGAACATTGT+AGG - Chr4:48622500-48622519 None:intergenic 30.0%
GAAATGGATAATGAAGATGT+TGG + Chr4:48627723-48627742 MsG0480020802.01.T01:CDS 30.0%
GAAGAAATCTTCATTCAGAT+GGG + Chr4:48620879-48620898 MsG0480020802.01.T01:intron 30.0%
GAATTAATGGTTGCACAATT+TGG + Chr4:48621248-48621267 MsG0480020802.01.T01:intron 30.0%
GAGTACCTTAATATTGTCAA+TGG - Chr4:48627957-48627976 None:intergenic 30.0%
GATTCAGTCTATTAAAGTGT+GGG + Chr4:48625459-48625478 MsG0480020802.01.T01:intron 30.0%
GCTTTAGCAAATAGATATTG+TGG + Chr4:48628048-48628067 MsG0480020802.01.T01:intron 30.0%
GGACACTTCTATTTATAAAG+AGG + Chr4:48629083-48629102 MsG0480020802.01.T01:three_prime_UTR 30.0%
GGTGATGTAAAAATAGTTGT+TGG + Chr4:48628256-48628275 MsG0480020802.01.T01:CDS 30.0%
GTCGTTTAATATTCACTTAC+AGG - Chr4:48628795-48628814 None:intergenic 30.0%
GTGGATCATGATAATAGAAT+GGG + Chr4:48626253-48626272 MsG0480020802.01.T01:intron 30.0%
TAACTATATATGTCTGGTGT+TGG + Chr4:48624914-48624933 MsG0480020802.01.T01:intron 30.0%
TAACTTCGATGAAATTGTCT+TGG + Chr4:48628282-48628301 MsG0480020802.01.T01:CDS 30.0%
TAAGAAATAGTGCTAGTGAT+TGG + Chr4:48620648-48620667 MsG0480020802.01.T01:CDS 30.0%
TACTTATTAGGAGATTGAGA+AGG - Chr4:48622333-48622352 None:intergenic 30.0%
TAGACAATTCAATCTCATGT+TGG - Chr4:48621677-48621696 None:intergenic 30.0%
TATTTGGTATAATACCCACT+TGG + Chr4:48626729-48626748 MsG0480020802.01.T01:intron 30.0%
TCATACCATGTAATTATCTG+TGG + Chr4:48627201-48627220 MsG0480020802.01.T01:intron 30.0%
TCGATGAAAAAGTAAACAGT+AGG - Chr4:48624634-48624653 None:intergenic 30.0%
TGAAGAAATGAGAAGAAAAG+TGG - Chr4:48624161-48624180 None:intergenic 30.0%
TGAGAACAATCAATTTGTGA+TGG + Chr4:48624455-48624474 MsG0480020802.01.T01:intron 30.0%
TGATTCAAAAATTAACGTCC+AGG + Chr4:48622869-48622888 MsG0480020802.01.T01:intron 30.0%
TGATTCAGTCTATTAAAGTG+TGG + Chr4:48625458-48625477 MsG0480020802.01.T01:intron 30.0%
TGTGTTAGAGATGCAAAAAA+TGG - Chr4:48628211-48628230 None:intergenic 30.0%
TTAATATTCACTTACAGGGT+CGG - Chr4:48628790-48628809 None:intergenic 30.0%
TTGAACGAGAATGGAATTAA+TGG + Chr4:48621235-48621254 MsG0480020802.01.T01:intron 30.0%
TTGACTATATGACTGCATTT+GGG - Chr4:48621938-48621957 None:intergenic 30.0%
TTGGACTTTCAAAAATTACG+GGG - Chr4:48625876-48625895 None:intergenic 30.0%
TTGTTTCAAAATCCAAAGGT+CGG + Chr4:48622176-48622195 MsG0480020802.01.T01:intron 30.0%
TTTGACTATATGACTGCATT+TGG - Chr4:48621939-48621958 None:intergenic 30.0%
! AAAATTTTTGCTTGATGGAG+AGG + Chr4:48627928-48627947 MsG0480020802.01.T01:CDS 30.0%
! AATGACAGAGTATTAAACAG+TGG - Chr4:48626120-48626139 None:intergenic 30.0%
! AATTTGGGTTCAGATTGTTT+GGG - Chr4:48624079-48624098 None:intergenic 30.0%
! ACCGAAATCTAGTTTATACT+GGG - Chr4:48628562-48628581 None:intergenic 30.0%
! ACTGATCTGAAATGGAATTT+GGG - Chr4:48624094-48624113 None:intergenic 30.0%
! ATAACTTGTATTTCATTGCC+TGG - Chr4:48622890-48622909 None:intergenic 30.0%
! CAAAACATGCATTTTGCATA+TGG + Chr4:48621105-48621124 MsG0480020802.01.T01:intron 30.0%
! CAAAATATCTTCCTTTTCGA+TGG + Chr4:48621892-48621911 MsG0480020802.01.T01:intron 30.0%
! CAAGGTCACTTTAATTACAA+TGG - Chr4:48628606-48628625 None:intergenic 30.0%
! CAAGTTCTATTTTCTTGTGT+GGG + Chr4:48628354-48628373 MsG0480020802.01.T01:intron 30.0%
! CCGCTGATAAAGTAAAATTT+TGG - Chr4:48629331-48629350 None:intergenic 30.0%
! GTTATAGGTACGTTGTATTT+TGG + Chr4:48621470-48621489 MsG0480020802.01.T01:intron 30.0%
! TAAGCTGGTTTCAATAATGT+TGG - Chr4:48627110-48627129 None:intergenic 30.0%
! TACCGAAATCTAGTTTATAC+TGG - Chr4:48628563-48628582 None:intergenic 30.0%
! TAGATGATTTTGAACGAGAA+TGG + Chr4:48621226-48621245 MsG0480020802.01.T01:intron 30.0%
! TCAAGTTCTATTTTCTTGTG+TGG + Chr4:48628353-48628372 MsG0480020802.01.T01:intron 30.0%
! TGATTTTATGGTTCTTGGAT+AGG + Chr4:48622414-48622433 MsG0480020802.01.T01:intron 30.0%
! TTTTTCTGTCATAATGTGCA+GGG + Chr4:48625505-48625524 MsG0480020802.01.T01:CDS 30.0%
!! AAAGACACCAACTTACTTTT+AGG + Chr4:48623470-48623489 MsG0480020802.01.T01:intron 30.0%
!! AGTTTTGCTTTTAAATGGTG+GGG + Chr4:48625000-48625019 MsG0480020802.01.T01:intron 30.0%
!! ATCAAATTATCTTGACTTGC+AGG - Chr4:48622095-48622114 None:intergenic 30.0%
!! CGAAAAGGAAGATATTTTGA+TGG - Chr4:48621891-48621910 None:intergenic 30.0%
!! GCTATATCACATATTTTTGC+AGG - Chr4:48622717-48622736 None:intergenic 30.0%
!! TGTTTTTATTCAGGCATTTG+GGG + Chr4:48628091-48628110 MsG0480020802.01.T01:intron 30.0%
!!! ACTGTTTACTTTTTCATCGA+TGG + Chr4:48624634-48624653 MsG0480020802.01.T01:intron 30.0%
!!! GTTTTTTGCTATTCTGTAGA+GGG - Chr4:48625720-48625739 None:intergenic 30.0%
!!! TGTTTTTTGCTATTCTGTAG+AGG - Chr4:48625721-48625740 None:intergenic 30.0%
!!! TTGAAGGACTATTTTTTGCT+GGG + Chr4:48621334-48621353 MsG0480020802.01.T01:intron 30.0%
!!! TTTGAAGGACTATTTTTTGC+TGG + Chr4:48621333-48621352 MsG0480020802.01.T01:intron 30.0%
AAAGCCTGTTGCAGATTATT+TGG + Chr4:48627746-48627765 MsG0480020802.01.T01:CDS 35.0%
AAATGAGAAGAAAAGTGGTG+AGG - Chr4:48624156-48624175 None:intergenic 35.0%
AACAACAAATGAGCATCCTA+GGG + Chr4:48628525-48628544 MsG0480020802.01.T01:CDS 35.0%
AACATTAGGTTTATGCTCCT+TGG + Chr4:48628410-48628429 MsG0480020802.01.T01:intron 35.0%
AACTGTTATGATATGCCACT+TGG + Chr4:48620790-48620809 MsG0480020802.01.T01:intron 35.0%
AACTTACAACTAAGGAGTCA+AGG - Chr4:48625186-48625205 None:intergenic 35.0%
AAGACCAAATAATCTGCAAC+AGG - Chr4:48627753-48627772 None:intergenic 35.0%
AAGTTAGGTTATGTAGAACC+GGG - Chr4:48628840-48628859 None:intergenic 35.0%
AATTCCTCCGACAGATAAAA+AGG + Chr4:48622065-48622084 MsG0480020802.01.T01:intron 35.0%
ACACCTTCCTAAAAGTAAGT+TGG - Chr4:48623480-48623499 None:intergenic 35.0%
ACCATCATTATTGGAACATC+GGG - Chr4:48622137-48622156 None:intergenic 35.0%
ACTCCTTAGTTGTAAGTTTC+TGG + Chr4:48625188-48625207 MsG0480020802.01.T01:CDS 35.0%
ACTGCAAAGTGAACAAAACT+TGG - Chr4:48628720-48628739 None:intergenic 35.0%
AGCTGAAGAAACTAATACAC+AGG - Chr4:48629259-48629278 None:intergenic 35.0%
ATAGAGACTATTTGTCGTGT+TGG + Chr4:48625395-48625414 MsG0480020802.01.T01:intron 35.0%
ATATAGGTACTTGCATTCAC+AGG + Chr4:48627890-48627909 MsG0480020802.01.T01:intron 35.0%
ATCCAAAACTTAACATGGGT+TGG - Chr4:48628633-48628652 None:intergenic 35.0%
ATTGTTGCAAAGTTGTCTAG+TGG + Chr4:48621131-48621150 MsG0480020802.01.T01:intron 35.0%
ATTTGGCAATTCCTTTGCAA+TGG - Chr4:48621084-48621103 None:intergenic 35.0%
CAAAATTGCAACTCATAAGC+CGG - Chr4:48625040-48625059 None:intergenic 35.0%
CATCTCCACAGATAATTACA+TGG - Chr4:48627209-48627228 None:intergenic 35.0%
CCAATCAAGAAACAGGTAAT+TGG + Chr4:48625892-48625911 MsG0480020802.01.T01:intron 35.0%
CTAGTTAAACATACTTCCTC+CGG + Chr4:48623668-48623687 MsG0480020802.01.T01:intron 35.0%
CTGGTAAAAATGTTGACCAA+CGG - Chr4:48625844-48625863 None:intergenic 35.0%
CTTGTTGGATGATACAAAGT+TGG - Chr4:48625818-48625837 None:intergenic 35.0%
GATCATCTACGGATAAAGTT+AGG - Chr4:48628855-48628874 None:intergenic 35.0%
GCTCATGAGTATAATGTTCA+GGG + Chr4:48624604-48624623 MsG0480020802.01.T01:CDS 35.0%
GGATGAATTGTGAGAGTTAA+AGG + Chr4:48629062-48629081 MsG0480020802.01.T01:three_prime_UTR 35.0%
GGTGACCATTGACAATATTA+AGG + Chr4:48627949-48627968 MsG0480020802.01.T01:CDS 35.0%
GTAGTTATGTTGTATACACC+AGG - Chr4:48625109-48625128 None:intergenic 35.0%
GTCAAAATTAGACATCAAGC+AGG + Chr4:48621543-48621562 MsG0480020802.01.T01:CDS 35.0%
TAACAAAGAGACAGGAAAAC+AGG - Chr4:48626684-48626703 None:intergenic 35.0%
TAACACAACTAGACCAAAGT+CGG - Chr4:48623929-48623948 None:intergenic 35.0%
TAGTGTTTGCCAAACTAGTA+AGG + Chr4:48626353-48626372 MsG0480020802.01.T01:intron 35.0%
TCAATATATCTCGAACCCAA+CGG - Chr4:48621165-48621184 None:intergenic 35.0%
TCAGTCTCTAATTCGATGTT+TGG + Chr4:48621985-48622004 MsG0480020802.01.T01:intron 35.0%
TCCAAAACTTAACATGGGTT+GGG - Chr4:48628632-48628651 None:intergenic 35.0%
TCGGCAAATCAAGATTCTTT+GGG - Chr4:48627648-48627667 None:intergenic 35.0%
TCTACTCTCATCGTCAATTT+GGG + Chr4:48621300-48621319 MsG0480020802.01.T01:intron 35.0%
TGAAAGTCCAATCAAGAAAC+AGG + Chr4:48625885-48625904 MsG0480020802.01.T01:CDS 35.0%
TGAACTTAAACTACTTCCTC+CGG - Chr4:48623818-48623837 None:intergenic 35.0%
TGATAAAAGACACCACCAAA+GGG + Chr4:48623550-48623569 MsG0480020802.01.T01:intron 35.0%
TGATTCGTAAGGATTGTTTG+TGG - Chr4:48621041-48621060 None:intergenic 35.0%
TGGACATATCCTTACTAGTT+TGG - Chr4:48626365-48626384 None:intergenic 35.0%
TGGACTTTCAAAAATTACGG+GGG - Chr4:48625875-48625894 None:intergenic 35.0%
TGGATTAACTCAAACGCATA+TGG - Chr4:48621657-48621676 None:intergenic 35.0%
TTAACTTACTCCATTGGATC+AGG - Chr4:48626487-48626506 None:intergenic 35.0%
TTAGGAATAACACCACAAAG+TGG + Chr4:48627230-48627249 MsG0480020802.01.T01:intron 35.0%
TTATGTCCTAAGGAGTTCAA+CGG + Chr4:48626565-48626584 MsG0480020802.01.T01:intron 35.0%
TTCAATGCTACGAAGATGTT+TGG - Chr4:48628479-48628498 None:intergenic 35.0%
TTCTTGGATAGGATCACAAA+GGG + Chr4:48622425-48622444 MsG0480020802.01.T01:intron 35.0%
TTGATAAAAGACACCACCAA+AGG + Chr4:48623549-48623568 MsG0480020802.01.T01:intron 35.0%
! ACATTGTAGGCATTTTCTTC+TGG - Chr4:48622487-48622506 None:intergenic 35.0%
! ATAGAAGACACCTTTTGTGA+AGG + Chr4:48623412-48623431 MsG0480020802.01.T01:intron 35.0%
! ATAGGATCTGACTTGAGAAA+AGG - Chr4:48628143-48628162 None:intergenic 35.0%
! CCAATTACCTGTTTCTTGAT+TGG - Chr4:48625895-48625914 None:intergenic 35.0%
! CTTTTATCAAGTCCACCTTA+AGG - Chr4:48623539-48623558 None:intergenic 35.0%
! CTTTTTCTGTCATAATGTGC+AGG + Chr4:48625504-48625523 MsG0480020802.01.T01:CDS 35.0%
! GAATTTGGGTTCAGATTGTT+TGG - Chr4:48624080-48624099 None:intergenic 35.0%
! GACTGATCTGAAATGGAATT+TGG - Chr4:48624095-48624114 None:intergenic 35.0%
! GCAGTTTCAATTTGAAGTGT+CGG + Chr4:48624957-48624976 MsG0480020802.01.T01:intron 35.0%
! GGCAGAAAATTTTTGCTTGA+TGG + Chr4:48627923-48627942 MsG0480020802.01.T01:CDS 35.0%
! GTATTAAACAGTGGCTTGTA+AGG - Chr4:48626111-48626130 None:intergenic 35.0%
! GTTGGTCAACATTTTTACCA+GGG + Chr4:48625843-48625862 MsG0480020802.01.T01:CDS 35.0%
! TAGGACAACTTTTCCTATTG+AGG + Chr4:48621608-48621627 MsG0480020802.01.T01:CDS 35.0%
! TGCAGATTATTTGGTCTTTC+TGG + Chr4:48627755-48627774 MsG0480020802.01.T01:CDS 35.0%
! TTAGTTCTTTGGCCATTGTA+AGG - Chr4:48624670-48624689 None:intergenic 35.0%
! TTTTACAAGTAGCACTCGAA+TGG - Chr4:48621853-48621872 None:intergenic 35.0%
! TTTTCTATTTGTCTTTGGCC+AGG - Chr4:48629202-48629221 None:intergenic 35.0%
! TTTTGCATGTGTGTTACATG+TGG + Chr4:48628689-48628708 MsG0480020802.01.T01:intron 35.0%
! TTTTTCGTAACCTGATCCAA+TGG + Chr4:48626474-48626493 MsG0480020802.01.T01:intron 35.0%
!! ACACCAACTTACTTTTAGGA+AGG + Chr4:48623474-48623493 MsG0480020802.01.T01:intron 35.0%
!! ATTTGTTGTTCCATCCATCT+TGG - Chr4:48628515-48628534 None:intergenic 35.0%
!! CAACTTCTAAAACCGATAGT+GGG + Chr4:48628995-48629014 MsG0480020802.01.T01:CDS 35.0%
!! CCTGTTGTTTCAAAATCCAA+AGG + Chr4:48622172-48622191 MsG0480020802.01.T01:intron 35.0%
!! TCAACTTCTAAAACCGATAG+TGG + Chr4:48628994-48629013 MsG0480020802.01.T01:CDS 35.0%
!! TCTTCATTCAGATGGGTTAA+AGG + Chr4:48620886-48620905 MsG0480020802.01.T01:intron 35.0%
!!! ACTATCGGTTTTAGAAGTTG+AGG - Chr4:48628995-48629014 None:intergenic 35.0%
!!! CCTTTGGATTTTGAAACAAC+AGG - Chr4:48622175-48622194 None:intergenic 35.0%
!!! GAAGAAAGATGGTGTTGTTT+TGG + Chr4:48624550-48624569 MsG0480020802.01.T01:CDS 35.0%
!!! GATGTCGTTTTGGGTTTTTT+CGG - Chr4:48624198-48624217 None:intergenic 35.0%
AAATATGCTGCCATTCAGAC+AGG + Chr4:48621699-48621718 MsG0480020802.01.T01:CDS 40.0%
AATTGTCTTGGATGAGTCGA+AGG + Chr4:48628294-48628313 MsG0480020802.01.T01:CDS 40.0%
ACCCGATGTTCCAATAATGA+TGG + Chr4:48622133-48622152 MsG0480020802.01.T01:intron 40.0%
ACTAGTAAGGATATGTCCAG+TGG + Chr4:48626366-48626385 MsG0480020802.01.T01:intron 40.0%
ACTTACAGAAGCCATTGCAA+AGG + Chr4:48621070-48621089 MsG0480020802.01.T01:intron 40.0%
ACTTGCATTCACAGGAAATG+AGG + Chr4:48627898-48627917 MsG0480020802.01.T01:intron 40.0%
AGACCAAAGTCGGTAAATTG+AGG - Chr4:48623919-48623938 None:intergenic 40.0%
AGATGCAAAAAATGGCAAGC+AGG - Chr4:48628203-48628222 None:intergenic 40.0%
ATCCATCTTGGCTACAACAA+TGG - Chr4:48628503-48628522 None:intergenic 40.0%
ATCCATTGTTGTAGCCAAGA+TGG + Chr4:48628498-48628517 MsG0480020802.01.T01:CDS 40.0%
ATGCTTCGGTGGAAATGAAT+TGG + Chr4:48624582-48624601 MsG0480020802.01.T01:CDS 40.0%
ATTGGAACATCGGGTACATT+GGG - Chr4:48622128-48622147 None:intergenic 40.0%
ATTGTTGTAGCCAAGATGGA+TGG + Chr4:48628502-48628521 MsG0480020802.01.T01:CDS 40.0%
CAAAAGTCTCCATTCTATCC+CGG + Chr4:48628819-48628838 MsG0480020802.01.T01:intron 40.0%
CAGAAACACCACATTGATAC+CGG + Chr4:48624859-48624878 MsG0480020802.01.T01:intron 40.0%
CGACATCATACCAAAGTTGA+TGG + Chr4:48621738-48621757 MsG0480020802.01.T01:CDS 40.0%
CGGCAAATCAAGATTCTTTG+GGG - Chr4:48627647-48627666 None:intergenic 40.0%
CTAAATTAGCCCACTCAAAC+TGG - Chr4:48626828-48626847 None:intergenic 40.0%
CTACTCTCATCGTCAATTTG+GGG + Chr4:48621301-48621320 MsG0480020802.01.T01:intron 40.0%
CTCATCGACACAAAAGGAAA+AGG - Chr4:48627803-48627822 None:intergenic 40.0%
CTCTACTCTCATCGTCAATT+TGG + Chr4:48621299-48621318 MsG0480020802.01.T01:intron 40.0%
CTTAGCCACATTAGGAATCA+CGG - Chr4:48625593-48625612 None:intergenic 40.0%
CTTTCTCTTCTCCATCGAAA+AGG - Chr4:48621906-48621925 None:intergenic 40.0%
GAACAACAAATGAGCATCCT+AGG + Chr4:48628524-48628543 MsG0480020802.01.T01:CDS 40.0%
GACATGGATAAAGAAGAGAC+AGG + Chr4:48625082-48625101 MsG0480020802.01.T01:CDS 40.0%
GATCTTTGTTCACGTGGAAA+TGG + Chr4:48627707-48627726 MsG0480020802.01.T01:CDS 40.0%
GCATTGTGACTGATCTGAAA+TGG - Chr4:48624102-48624121 None:intergenic 40.0%
GGAGTTCATAAGCCTTACAA+TGG + Chr4:48624655-48624674 MsG0480020802.01.T01:intron 40.0%
GGATTGATGCATGTTTCTTG+AGG - Chr4:48628952-48628971 None:intergenic 40.0%
GGCTCATGAGTATAATGTTC+AGG + Chr4:48624603-48624622 MsG0480020802.01.T01:CDS 40.0%
GTAGAGAAGCTATAGTGACA+TGG + Chr4:48625066-48625085 MsG0480020802.01.T01:intron 40.0%
GTCGGCAAATCAAGATTCTT+TGG - Chr4:48627649-48627668 None:intergenic 40.0%
GTCTATTAAAGTGTGGGTGA+TGG + Chr4:48625465-48625484 MsG0480020802.01.T01:intron 40.0%
GTGAAAATCACACCTTAAGG+TGG + Chr4:48623524-48623543 MsG0480020802.01.T01:intron 40.0%
GTTCTTGGATAGGATCACAA+AGG + Chr4:48622424-48622443 MsG0480020802.01.T01:intron 40.0%
TACTATCCGTTGAACTCCTT+AGG - Chr4:48626574-48626593 None:intergenic 40.0%
TATCGGTATCAGTGTCATGT+CGG - Chr4:48624778-48624797 None:intergenic 40.0%
TATGTAGAACCGGGATAGAA+TGG - Chr4:48628831-48628850 None:intergenic 40.0%
TATTGGAACATCGGGTACAT+TGG - Chr4:48622129-48622148 None:intergenic 40.0%
TATTTCATCGTCTCTGCAGA+TGG + Chr4:48625769-48625788 MsG0480020802.01.T01:intron 40.0%
TCAAGACTCATCGACACAAA+AGG - Chr4:48627809-48627828 None:intergenic 40.0%
TCGAACCTAAGACCTTAAAG+AGG - Chr4:48626794-48626813 None:intergenic 40.0%
TCGATATGTAGTACTAGTCC+AGG - Chr4:48620767-48620786 None:intergenic 40.0%
TGAACAAAGATCAGCTGCAA+AGG - Chr4:48627699-48627718 None:intergenic 40.0%
TGACTTACACTTTCGGGAAT+AGG - Chr4:48628161-48628180 None:intergenic 40.0%
TGCACAATTTGGTCTAAGCA+AGG + Chr4:48621259-48621278 MsG0480020802.01.T01:intron 40.0%
TGTTCACTTTGCAGTCTGAT+GGG + Chr4:48628725-48628744 MsG0480020802.01.T01:intron 40.0%
TTATGTTACAAGCCACCCTT+TGG - Chr4:48623568-48623587 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + Chr4:48623799-48623818 MsG0480020802.01.T01:intron 40.0%
TTGCTTATAAATGTGACCGG+AGG - Chr4:48623818-48623799 None:intergenic 40.0%
TTGTTCACTTTGCAGTCTGA+TGG + Chr4:48628724-48628743 MsG0480020802.01.T01:intron 40.0%
TTGTTGCTAATCGTAGAGTG+AGG - Chr4:48627411-48627430 None:intergenic 40.0%
TTTGCAGCATGTTCCTCAAT+AGG - Chr4:48621624-48621643 None:intergenic 40.0%
! AATGTCTATTTTCCCTTGCC+TGG + Chr4:48629181-48629200 MsG0480020802.01.T01:three_prime_UTR 40.0%
! AGAAGCAGCAAAGCTTTTCA+AGG + Chr4:48626073-48626092 MsG0480020802.01.T01:CDS 40.0%
! AGGCATGCCTTTTTATCTGT+CGG - Chr4:48622075-48622094 None:intergenic 40.0%
! ATGATATGCCACTTGGAATG+TGG + Chr4:48620797-48620816 MsG0480020802.01.T01:intron 40.0%
! CGTTGGTCAACATTTTTACC+AGG + Chr4:48625842-48625861 MsG0480020802.01.T01:CDS 40.0%
! CTAACTTGATGGCAGAATGA+TGG + Chr4:48628235-48628254 MsG0480020802.01.T01:intron 40.0%
! CTAGTGGTTTTCTTTCCGTT+GGG + Chr4:48621147-48621166 MsG0480020802.01.T01:intron 40.0%
! CTATATATGTCTGGTGTTGG+TGG + Chr4:48624917-48624936 MsG0480020802.01.T01:intron 40.0%
! GAAGCAGCAAAGCTTTTCAA+GGG + Chr4:48626074-48626093 MsG0480020802.01.T01:CDS 40.0%
! GAGGAGAAACTGAACCATTT+TGG + Chr4:48625669-48625688 MsG0480020802.01.T01:CDS 40.0%
! GCATCATGCACATTTTCACA+TGG - Chr4:48623305-48623324 None:intergenic 40.0%
! GGAAAACGACTAGTCGTTTA+TGG - Chr4:48624129-48624148 None:intergenic 40.0%
! GTGCAAGATCTTGATTCGTA+AGG - Chr4:48621052-48621071 None:intergenic 40.0%
! TCCCAACCCATGTTAAGTTT+TGG + Chr4:48628628-48628647 MsG0480020802.01.T01:intron 40.0%
! TCTAGTGGTTTTCTTTCCGT+TGG + Chr4:48621146-48621165 MsG0480020802.01.T01:intron 40.0%
! TTAGAAGTTGAGGTTGGTTC+TGG - Chr4:48628985-48629004 None:intergenic 40.0%
! TTTTCAAATGTGCAGTGAGC+TGG + Chr4:48622461-48622480 MsG0480020802.01.T01:CDS 40.0%
!! AAGCAGCAAAGCTTTTCAAG+GGG + Chr4:48626075-48626094 MsG0480020802.01.T01:CDS 40.0%
!! ATGCCTCAATTTACCGACTT+TGG + Chr4:48623913-48623932 MsG0480020802.01.T01:intron 40.0%
!! CATCATACCAAAGTTGATGG+TGG + Chr4:48621741-48621760 MsG0480020802.01.T01:CDS 40.0%
!! CTTGTTGTATGTTGGTTCCA+AGG - Chr4:48628452-48628471 None:intergenic 40.0%
!! TATATTTGTCTGGTGTTGCC+TGG + Chr4:48624832-48624851 MsG0480020802.01.T01:intron 40.0%
!! TGGATTGGGGTTGATAATCA+TGG + Chr4:48620817-48620836 MsG0480020802.01.T01:intron 40.0%
!! TTTGGTCTTGCTCAAGAAAG+AGG + Chr4:48625647-48625666 MsG0480020802.01.T01:CDS 40.0%
!!! AACATCTTTTCGTCGACTTC+AGG - Chr4:48624400-48624419 None:intergenic 40.0%
!!! AAGGTTTTAGCTTGTCTGCA+AGG - Chr4:48628124-48628143 None:intergenic 40.0%
!!! AGATGGTGTTGTTTTGGCTA+AGG + Chr4:48624556-48624575 MsG0480020802.01.T01:CDS 40.0%
!!! TCGGTTTTAGAAGTTGAGGT+TGG - Chr4:48628991-48629010 None:intergenic 40.0%
!!! TCTTTTCTCTGTTTCTGCTG+AGG + Chr4:48627975-48627994 MsG0480020802.01.T01:intron 40.0%
!!! TGGGGCATTGATTTTGAAAC+CGG + Chr4:48625018-48625037 MsG0480020802.01.T01:intron 40.0%
AAAGGTTCAAGGCCAAAAGG+TGG + Chr4:48622202-48622221 MsG0480020802.01.T01:intron 45.0%
AAATCCAAAGGTCGGCCAAA+AGG + Chr4:48622184-48622203 MsG0480020802.01.T01:intron 45.0%
AAATGAGCATCCTAGGGCAA+AGG + Chr4:48628531-48628550 MsG0480020802.01.T01:CDS 45.0%
AACACCACAAAGTGGCATCA+TGG + Chr4:48627238-48627257 MsG0480020802.01.T01:intron 45.0%
ACAATTCCGCGAGTCATGAT+TGG - Chr4:48622281-48622300 None:intergenic 45.0%
AGCTGCAGCATCAAAACTTG+AGG + Chr4:48625546-48625565 MsG0480020802.01.T01:CDS 45.0%
AGGTTCCTTGAAGTCTTCGT+CGG - Chr4:48624380-48624399 None:intergenic 45.0%
ATCATCCAACAAGCTTCCGT+TGG + Chr4:48625825-48625844 MsG0480020802.01.T01:CDS 45.0%
ATTTGTCTTTGGCCAGGCAA+GGG - Chr4:48629196-48629215 None:intergenic 45.0%
CATGGTGTGGTTTGATTGGA+TGG + Chr4:48627256-48627275 MsG0480020802.01.T01:intron 45.0%
CATTACATCAGAAGCCACTG+TGG + Chr4:48628665-48628684 MsG0480020802.01.T01:intron 45.0%
CCAAAAGGTTCAAGGCCAAA+AGG + Chr4:48622199-48622218 MsG0480020802.01.T01:intron 45.0%
CCAAACCGTGATTCCTAATG+TGG + Chr4:48625585-48625604 MsG0480020802.01.T01:intron 45.0%
CCACATTAGGAATCACGGTT+TGG - Chr4:48625588-48625607 None:intergenic 45.0%
CGGTATCAATGTGGTGTTTC+TGG - Chr4:48624861-48624880 None:intergenic 45.0%
CGTTGTCACGTTCCAAATTG+CGG + Chr4:48622250-48622269 MsG0480020802.01.T01:intron 45.0%
CTCAGCAAAGAAAGTTGCAG+TGG + Chr4:48629145-48629164 MsG0480020802.01.T01:three_prime_UTR 45.0%
GAAGAAAAGTGGTGAGGAAG+AGG - Chr4:48624150-48624169 None:intergenic 45.0%
GATAAAGAAGAGACAGGACC+TGG + Chr4:48625088-48625107 MsG0480020802.01.T01:CDS 45.0%
GCAGCATCAAAACTTGAGGA+TGG + Chr4:48625550-48625569 MsG0480020802.01.T01:CDS 45.0%
GCATCATGGTGTGGTTTGAT+TGG + Chr4:48627252-48627271 MsG0480020802.01.T01:intron 45.0%
GCATTCACAGGAAATGAGGA+TGG + Chr4:48627902-48627921 MsG0480020802.01.T01:intron 45.0%
GGTATAATACCCACTTGGGT+TGG + Chr4:48626734-48626753 MsG0480020802.01.T01:intron 45.0%
GTCGAAGGATGTTCTACTTG+AGG + Chr4:48628309-48628328 MsG0480020802.01.T01:CDS 45.0%
GTGTGGTTTGATTGGATGGA+TGG + Chr4:48627260-48627279 MsG0480020802.01.T01:intron 45.0%
TAAAAGACACCACCAAAGGG+TGG + Chr4:48623553-48623572 MsG0480020802.01.T01:intron 45.0%
TAGACGACCACCATCAACTT+TGG - Chr4:48621751-48621770 None:intergenic 45.0%
TAGGTTTATGCTCCTTGGTG+TGG + Chr4:48628415-48628434 MsG0480020802.01.T01:intron 45.0%
TATTTGTCTTTGGCCAGGCA+AGG - Chr4:48629197-48629216 None:intergenic 45.0%
TCTTGAGCAAGACCAAAGCA+GGG - Chr4:48625644-48625663 None:intergenic 45.0%
TGGATAGGATCACAAAGGGT+TGG + Chr4:48622429-48622448 MsG0480020802.01.T01:intron 45.0%
TGGTTGAATTCTATGCTCCG+TGG + Chr4:48624475-48624494 MsG0480020802.01.T01:intron 45.0%
TGTTGATGTTGATCGGACAG+TGG + Chr4:48628910-48628929 MsG0480020802.01.T01:CDS 45.0%
TTCGTCGTCGTCGAAGTTAT+CGG - Chr4:48624308-48624327 None:intergenic 45.0%
TTCTGTAGAGGGAAAGAGAG+TGG - Chr4:48625709-48625728 None:intergenic 45.0%
TTCTTGAGCAAGACCAAAGC+AGG - Chr4:48625645-48625664 None:intergenic 45.0%
TTGGGGCCTAGCTTATTTGA+AGG + Chr4:48621318-48621337 MsG0480020802.01.T01:intron 45.0%
TTTGGCTAAGGTGGATGCTT+CGG + Chr4:48624568-48624587 MsG0480020802.01.T01:CDS 45.0%
! AAGGATTCTTTGGGGAAGTG+TGG - Chr4:48627603-48627622 None:intergenic 45.0%
! ATGCCACTTGGAATGTGGAT+TGG + Chr4:48620802-48620821 MsG0480020802.01.T01:intron 45.0%
! CATGCCTTTTTATCTGTCGG+AGG - Chr4:48622072-48622091 None:intergenic 45.0%
! GTCATTGTCAAGCTTTAGCC+CGG + Chr4:48624502-48624521 MsG0480020802.01.T01:intron 45.0%
! GTGTGCACCAAGGGAAATTT+TGG - Chr4:48627389-48627408 None:intergenic 45.0%
! TCGGAACTCTTTTTCCTGCT+GGG - Chr4:48628771-48628790 None:intergenic 45.0%
! TGCCACTTGGAATGTGGATT+GGG + Chr4:48620803-48620822 MsG0480020802.01.T01:intron 45.0%
! TTTTTCCTGCTGGGTAGAAG+AGG - Chr4:48628762-48628781 None:intergenic 45.0%
!! AGCAAAGCTTTTCAAGGGGA+AGG + Chr4:48626079-48626098 MsG0480020802.01.T01:CDS 45.0%
!! GTGCTCCTCTTTAAGGTCTT+AGG + Chr4:48626786-48626805 MsG0480020802.01.T01:intron 45.0%
!! GTTGGTTCTGGAGTTGGAAT+GGG - Chr4:48628973-48628992 None:intergenic 45.0%
!! TCGTGTTGGTGTTGATTCTC+TGG + Chr4:48625409-48625428 MsG0480020802.01.T01:intron 45.0%
!! TGTATGTTGGTTCCAAGGCT+TGG - Chr4:48628447-48628466 None:intergenic 45.0%
!! TTGGCGAGCTTGTTGTATGT+TGG - Chr4:48628460-48628479 None:intergenic 45.0%
!!! ATCGTCGTCGATGTCGTTTT+GGG - Chr4:48624207-48624226 None:intergenic 45.0%
!!! CCTTTTGGCCTTGAACCTTT+TGG - Chr4:48622202-48622221 None:intergenic 45.0%
!!! TGGTGTTGTTTTGGCTAAGG+TGG + Chr4:48624559-48624578 MsG0480020802.01.T01:CDS 45.0%
!! TATATATATATATATATATG+GGG - Chr4:48623404-48623385 None:intergenic 5.0%
!! TATATATATATATATCAAAT+TGG + Chr4:48623627-48623646 MsG0480020802.01.T01:intron 5.0%
!!! AATTAATATTAAGTTTATTT+TGG + Chr4:48626629-48626648 MsG0480020802.01.T01:intron 5.0%
AAGGTCGGCCAAAAGGTTCA+AGG + Chr4:48622191-48622210 MsG0480020802.01.T01:intron 50.0%
ACACTCCGACGAAGACTTCA+AGG + Chr4:48624372-48624391 MsG0480020802.01.T01:intron 50.0%
ACCCCAATCCACATTCCAAG+TGG - Chr4:48620808-48620827 None:intergenic 50.0%
ATGGTGGTCGTCTAGTAAGC+TGG + Chr4:48621757-48621776 MsG0480020802.01.T01:intron 50.0%
CACAAAGTGGCATCATGGTG+TGG + Chr4:48627243-48627262 MsG0480020802.01.T01:intron 50.0%
CACACATGCAAAAGCCACAG+TGG - Chr4:48628682-48628701 None:intergenic 50.0%
CGTCGAAGTTATCGGGATCT+GGG - Chr4:48624300-48624319 None:intergenic 50.0%
CTGGAGTGTGCTCCTCTTTA+AGG + Chr4:48626779-48626798 MsG0480020802.01.T01:intron 50.0%
CTGGGTAGAAGAGGAGAGTA+GGG - Chr4:48628753-48628772 None:intergenic 50.0%
GAATTCTATGCTCCGTGGTG+TGG + Chr4:48624480-48624499 MsG0480020802.01.T01:intron 50.0%
GACGAATTCGGCGATTTCTC+CGG + Chr4:48624340-48624359 MsG0480020802.01.T01:intron 50.0%
GACGTCAGAACTCCCACTAT+CGG - Chr4:48629010-48629029 None:intergenic 50.0%
GATAACTTCGACGACGACGA+AGG + Chr4:48624307-48624326 MsG0480020802.01.T01:intron 50.0%
GCAGCTGATCTTTGTTCACG+TGG + Chr4:48627701-48627720 MsG0480020802.01.T01:intron 50.0%
GCGACGGAGTTGAAGAAAGA+TGG + Chr4:48624539-48624558 MsG0480020802.01.T01:CDS 50.0%
GCTTGACAATGACCACACCA+CGG - Chr4:48624495-48624514 None:intergenic 50.0%
GGTCCTAAGTCAATACCACC+AGG - Chr4:48626760-48626779 None:intergenic 50.0%
GGTCTTAGGTTCGATTCTCC+CGG + Chr4:48626800-48626819 MsG0480020802.01.T01:intron 50.0%
GGTCTTGCTCAAGAAAGAGG+AGG + Chr4:48625650-48625669 MsG0480020802.01.T01:CDS 50.0%
GTGACAACGTCGAAGCTTCT+TGG - Chr4:48622239-48622258 None:intergenic 50.0%
GTTGACCAACGGAAGCTTGT+TGG - Chr4:48625833-48625852 None:intergenic 50.0%
TAGAGTGAGGTGTGCACCAA+GGG - Chr4:48627398-48627417 None:intergenic 50.0%
TCGTCGAAGTTATCGGGATC+TGG - Chr4:48624301-48624320 None:intergenic 50.0%
TCGTCGTCGTCGAAGTTATC+GGG - Chr4:48624307-48624326 None:intergenic 50.0%
TGATGTTGATCGGACAGTGG+TGG + Chr4:48628913-48628932 MsG0480020802.01.T01:CDS 50.0%
TGTAGTACTAGTCCAGGCTG+AGG - Chr4:48620761-48620780 None:intergenic 50.0%
TGTCACGTTCCAAATTGCGG+CGG + Chr4:48622253-48622272 MsG0480020802.01.T01:intron 50.0%
TGTTACAAGCCACCCTTTGG+TGG - Chr4:48623565-48623584 None:intergenic 50.0%
TTGAAGTCTTCGTCGGAGTG+TGG - Chr4:48624373-48624392 None:intergenic 50.0%
TTGGTTCCAAGGCTTGGCAA+TGG - Chr4:48628441-48628460 None:intergenic 50.0%
TTTGCTGGGATGACGACAAC+TGG + Chr4:48621348-48621367 MsG0480020802.01.T01:intron 50.0%
! CTGGGTTTTACCTTTGCCCT+AGG - Chr4:48628544-48628563 None:intergenic 50.0%
! CTTAAAGAGGAGCACACTCC+AGG - Chr4:48626781-48626800 None:intergenic 50.0%
! GCAGCTTCAACTCCACCTTT+TGG - Chr4:48622217-48622236 None:intergenic 50.0%
! GCCACTTGGAATGTGGATTG+GGG + Chr4:48620804-48620823 MsG0480020802.01.T01:intron 50.0%
! GTCGGAACTCTTTTTCCTGC+TGG - Chr4:48628772-48628791 None:intergenic 50.0%
! TAGTGGGAGTTCTGACGTCA+AGG + Chr4:48629011-48629030 MsG0480020802.01.T01:CDS 50.0%
! TGAACCTTTTGGCCGACCTT+TGG - Chr4:48622191-48622210 None:intergenic 50.0%
! TGATTGGTTCCGCCGCAATT+TGG - Chr4:48622265-48622284 None:intergenic 50.0%
!! ATGTCCAGTGGTGTCGTTTG+CGG + Chr4:48626378-48626397 MsG0480020802.01.T01:intron 50.0%
!! ATGTGGTGTTTCTGGTGTCC+AGG - Chr4:48624853-48624872 None:intergenic 50.0%
!! CACACCATGATGCCACTTTG+TGG - Chr4:48627245-48627264 None:intergenic 50.0%
!! CATCGTCGTCGATGTCGTTT+TGG - Chr4:48624208-48624227 None:intergenic 50.0%
!! GGTGGTATTGACTTAGGACC+TGG + Chr4:48626760-48626779 MsG0480020802.01.T01:intron 50.0%
!! GGTTGGTTCTGGAGTTGGAA+TGG - Chr4:48628974-48628993 None:intergenic 50.0%
!! GTTGAGGTTGGTTCTGGAGT+TGG - Chr4:48628979-48628998 None:intergenic 50.0%
!! TGGCCTGGTGGTATTGACTT+AGG + Chr4:48626754-48626773 MsG0480020802.01.T01:intron 50.0%
!! TGGTGTCTTCTGGTTCTTCG+AGG - Chr4:48624244-48624263 None:intergenic 50.0%
!! TTAACATGGGTTGGGACCCA+AGG - Chr4:48628624-48628643 None:intergenic 50.0%
AAATCGCGTGGTCGTGGTTG+TGG - Chr4:48624277-48624296 None:intergenic 55.0%
ACTCTCCTCTTCTACCCAGC+AGG + Chr4:48628754-48628773 MsG0480020802.01.T01:intron 55.0%
AGATGTCAAGCGCCCTGCTT+TGG + Chr4:48625629-48625648 MsG0480020802.01.T01:intron 55.0%
CCACATCAAGAACCTCAGCC+TGG + Chr4:48620746-48620765 MsG0480020802.01.T01:CDS 55.0%
CCAGGCTGAGGTTCTTGATG+TGG - Chr4:48620749-48620768 None:intergenic 55.0%
CTTTAGCCCGGAGTATGCTG+CGG + Chr4:48624514-48624533 MsG0480020802.01.T01:intron 55.0%
GAGTAGCAGCACAGACGTGA+AGG + Chr4:48629041-48629060 MsG0480020802.01.T01:CDS 55.0%
GCGGAACCAATCATGACTCG+CGG + Chr4:48622272-48622291 MsG0480020802.01.T01:intron 55.0%
GCTGGGTAGAAGAGGAGAGT+AGG - Chr4:48628754-48628773 None:intergenic 55.0%
GTAGAGTGAGGTGTGCACCA+AGG - Chr4:48627399-48627418 None:intergenic 55.0%
GTCGGAGTGTGGATCGTAAC+CGG - Chr4:48624362-48624381 None:intergenic 55.0%
TAGCCCACTCAAACTGGCAC+CGG - Chr4:48626822-48626841 None:intergenic 55.0%
TCTGGTGCAGTGTGACTGAG+TGG + Chr4:48626234-48626253 MsG0480020802.01.T01:intron 55.0%
! AAAGCAGGGCGCTTGACATC+TGG - Chr4:48625630-48625649 None:intergenic 55.0%
! AAGCAGGGCGCTTGACATCT+GGG - Chr4:48625629-48625648 None:intergenic 55.0%
!! AATACCCACTTGGGTTGGCC+TGG + Chr4:48626739-48626758 MsG0480020802.01.T01:intron 55.0%
!! AATTACGGGGGCACTTTCCC+TGG - Chr4:48625863-48625882 None:intergenic 55.0%
!! TGTCTGGTGTTGGTGGACAC+TGG + Chr4:48624924-48624943 MsG0480020802.01.T01:intron 55.0%
!! TGTGTGGTGGTGGTGTCTTC+TGG - Chr4:48624254-48624273 None:intergenic 55.0%
ACCACCAGGCCAACCCAAGT+GGG - Chr4:48626746-48626765 None:intergenic 60.0%
AGCCCACTCAAACTGGCACC+GGG - Chr4:48626821-48626840 None:intergenic 60.0%
GACGACGACGAAGGCGATGA+CGG + Chr4:48624316-48624335 MsG0480020802.01.T01:intron 60.0%
GCTTGGCAATGGCCACACCA+AGG - Chr4:48628430-48628449 None:intergenic 60.0%
GGCTAAGGTGGATGCTTCGG+TGG + Chr4:48624571-48624590 MsG0480020802.01.T01:CDS 60.0%
GTCGTGGTTGTGGTGTGTGG+TGG - Chr4:48624267-48624286 None:intergenic 60.0%
GTGGTCGTGGTTGTGGTGTG+TGG - Chr4:48624270-48624289 None:intergenic 60.0%
GTGGTTGTGGTGTGTGGTGG+TGG - Chr4:48624264-48624283 None:intergenic 60.0%
GTGTGGCCATTGCCAAGCCT+TGG + Chr4:48628432-48628451 MsG0480020802.01.T01:CDS 60.0%
TACCACCAGGCCAACCCAAG+TGG - Chr4:48626747-48626766 None:intergenic 60.0%
TCAGCCGCAAACGACACCAC+TGG - Chr4:48626385-48626404 None:intergenic 60.0%
TCGGGATCTGGGAAATCGCG+TGG - Chr4:48624289-48624308 None:intergenic 60.0%
TCTGGGAAATCGCGTGGTCG+TGG - Chr4:48624283-48624302 None:intergenic 60.0%
! CTCCCGGTGCCAGTTTGAGT+GGG + Chr4:48626816-48626835 MsG0480020802.01.T01:intron 60.0%
! GGCGATGACGGCGACGAATT+CGG + Chr4:48624328-48624347 MsG0480020802.01.T01:intron 60.0%
! TCTCCCGGTGCCAGTTTGAG+TGG + Chr4:48626815-48626834 MsG0480020802.01.T01:intron 60.0%
!! GGTGTCGTTTGCGGCTGAGT+AGG + Chr4:48626387-48626406 MsG0480020802.01.T01:intron 60.0%
TAGCCCGGAGTATGCTGCGG+CGG + Chr4:48624517-48624536 MsG0480020802.01.T01:intron 65.0%
!! ACCCACTTGGGTTGGCCTGG+TGG + Chr4:48626742-48626761 MsG0480020802.01.T01:intron 65.0%
GGAGTATGCTGCGGCGGCGA+CGG + Chr4:48624523-48624542 MsG0480020802.01.T01:CDS 70.0%
GTCGCCGCCGCAGCATACTC+CGG - Chr4:48624524-48624543 None:intergenic 70.0%
TCGCCGCCGCAGCATACTCC+GGG - Chr4:48624523-48624542 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 48620617 48629352 48620617 ID=MsG0480020802.01;Name=MsG0480020802.01
Chr4 mRNA 48620617 48629352 48620617 ID=MsG0480020802.01.T01;Parent=MsG0480020802.01;Name=MsG0480020802.01.T01;_AED=0.42;_eAED=0.46;_QI=0|0.42|0.46|1|0.92|0.86|15|292|576
Chr4 exon 48620617 48620772 48620617 ID=MsG0480020802.01.T01:exon:159;Parent=MsG0480020802.01.T01
Chr4 exon 48621531 48621770 48621531 ID=MsG0480020802.01.T01:exon:160;Parent=MsG0480020802.01.T01
Chr4 exon 48622436 48622536 48622436 ID=MsG0480020802.01.T01:exon:161;Parent=MsG0480020802.01.T01
Chr4 exon 48624520 48624625 48624520 ID=MsG0480020802.01.T01:exon:162;Parent=MsG0480020802.01.T01
Chr4 exon 48625070 48625246 48625070 ID=MsG0480020802.01.T01:exon:163;Parent=MsG0480020802.01.T01
Chr4 exon 48625466 48625571 48625466 ID=MsG0480020802.01.T01:exon:164;Parent=MsG0480020802.01.T01
Chr4 exon 48625631 48625690 48625631 ID=MsG0480020802.01.T01:exon:165;Parent=MsG0480020802.01.T01
Chr4 exon 48625788 48625906 48625788 ID=MsG0480020802.01.T01:exon:166;Parent=MsG0480020802.01.T01
Chr4 exon 48626020 48626100 48626020 ID=MsG0480020802.01.T01:exon:167;Parent=MsG0480020802.01.T01
Chr4 exon 48627705 48627789 48627705 ID=MsG0480020802.01.T01:exon:168;Parent=MsG0480020802.01.T01
Chr4 exon 48627912 48627970 48627912 ID=MsG0480020802.01.T01:exon:169;Parent=MsG0480020802.01.T01
Chr4 exon 48628104 48628172 48628104 ID=MsG0480020802.01.T01:exon:170;Parent=MsG0480020802.01.T01
Chr4 exon 48628250 48628330 48628250 ID=MsG0480020802.01.T01:exon:171;Parent=MsG0480020802.01.T01
Chr4 exon 48628418 48628552 48628418 ID=MsG0480020802.01.T01:exon:172;Parent=MsG0480020802.01.T01
Chr4 exon 48628905 48629352 48628905 ID=MsG0480020802.01.T01:exon:173;Parent=MsG0480020802.01.T01
Chr4 CDS 48620617 48620772 48620617 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48621531 48621770 48621531 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48622436 48622536 48622436 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48624520 48624625 48624520 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48625070 48625246 48625070 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48625466 48625571 48625466 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48625631 48625690 48625631 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48625788 48625906 48625788 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48626020 48626100 48626020 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48627705 48627789 48627705 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48627912 48627970 48627912 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48628104 48628172 48628104 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48628250 48628330 48628250 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48628418 48628552 48628418 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 CDS 48628905 48629060 48628905 ID=MsG0480020802.01.T01:cds;Parent=MsG0480020802.01.T01
Chr4 three_prime_UTR 48629061 48629352 48629061 ID=MsG0480020802.01.T01:three_prime_utr;Parent=MsG0480020802.01.T01
Gene Sequence

>MsG0480020802.01.T01

TTTGAATTAAGGATTAATATGACATCTGAAGTAAGAAATAGTGCTAGTGATTGGCACTTAGAGCTTCTTAAAGATTACACTTCTACATATGAAGATGATGAATATGGAAATTCATTTAGCTTTCAAGAGCCACATCAAGAACCTCAGCCTGGACTAGTTGGTGTTGCTGTCAAAATTAGACATCAAGCAGGAGAAGAAGCAAGAATGCGTCAAAAGTACCATAATTCTCTAATTAGGACAACTTTTCCTATTGAGGAACATGCTGCAAAAATACTCACACCATATGCGTTTGAGTTAATCCAACATGAGATTGAATTGTCTACAAAATATGCTGCCATTCAGACAGGTAACAATTATATCGTGCGACATCATACCAAAGTTGATGGTGGTCGTCTAGATCACAAAGGGTTGGAGACAGTCATTTTCAAATGTGCAGTGAGCTGGCCAGAAGAAAATGCCTACAATGTTCTTAAGTTGAAGATAATGAATAATGGATGCCCGGAGTATGCTGCGGCGGCGACGGAGTTGAAGAAAGATGGTGTTGTTTTGGCTAAGGTGGATGCTTCGGTGGAAATGAATTGGCTCATGAGTATAATGTTCAGGAGAAGCTATAGTGACATGGATAAAGAAGAGACAGGACCTGGTGTATACAACATAACTACATTGGATGATGCTGAACGCATATTGACATCTGAAACTAAAGTTGTTTTGGGATTCCTTGACTCCTTAGTTGTAAGTTTCTGGATTCTTGTTTCCCTCTTTATCAAATGCAATTTAGGATCTATTAAAGTGTGGGTGATGGATAAGTCTGATGCCTTCTTTTTCTGTCATAATGTGCAGGGTGCTGAAAGTGATGAGCTAGCTGCAGCATCAAAACTTGAGGATGATGTCAAGCGCCCTGCTTTGGTCTTGCTCAAGAAAGAGGAGGAGAAACTGAACCATTTTGATGGAAAATTTGTAAAAGCGGAAATAGCCAACTTTGTATCATCCAACAAGCTTCCGTTGGTCAACATTTTTACCAGGGAAAGTGCCCCCGTAATTTTTGAAAGTCCAATCAAGAAACAGTTGTTGCTGTTTGTGACTTCAAATGATACAGCGAAGTTCATCACAGTATTTCAAGAAGCAGCAAAGCTTTTCAAGGGGAAGCTGATCTTTGTTCACGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTTGCAGATTATTTGGTCTTTCTGGAATACTCCCAAAGAAATGAGGATGGCAGAAAATTTTTGCTTGATGGAGAGGTGACCATTGACAATATTAAGGCATTTGGGGAAGATTTCCTTGCAGACAAGCTAAAACCTTTTCTCAAGTCAGATCCTATTCCCGAAAGTAATGATGGTGATGTAAAAATAGTTGTTGGCAATAACTTCGATGAAATTGTCTTGGATGAGTCGAAGGATGTTCTACTTGAGGTTTATGCTCCTTGGTGTGGCCATTGCCAAGCCTTGGAACCAACATACAACAAGCTCGCCAAACATCTTCGTAGCATTGAATCCATTGTTGTAGCCAAGATGGATGGAACAACAAATGAGCATCCTAGGGCAAAGATTACTGTTGATGTTGATCGGACAGTGGTGGCTTTTTATAAATTCCTCAAGAAACATGCATCAATCCCATTCCAACTCCAGAACCAACCTCAACTTCTAAAACCGATAGTGGGAGTTCTGACGTCAAGGAGAGTCAGAGTAGCAGCACAGACGTGA
Protein sequence

>MsG0480020802.01.T01

FELRINMTSEVRNSASDWHLELLKDYTSTYEDDEYGNSFSFQEPHQEPQPGLVGVAVKIRHQAGEEARMRQKYHNSLIRTTFPIEEHAAKILTPYAFELIQHEIELSTKYAAIQTGNNYIVRHHTKVDGGRLDHKGLETVIFKCAVSWPEENAYNVLKLKIMNNGCPEYAAAATELKKDGVVLAKVDASVEMNWLMSIMFRRSYSDMDKEETGPGVYNITTLDDAERILTSETKVVLGFLDSLVVSFWILVSLFIKCNLGSIKVWVMDKSDAFFFCHNVQGAESDELAAASKLEDDVKRPALVLLKKEEEKLNHFDGKFVKAEIANFVSSNKLPLVNIFTRESAPVIFESPIKKQLLLFVTSNDTAKFITVFQEAAKLFKGKLIFVHVEMDNEDVGKPVADYLVFLEYSQRNEDGRKFLLDGEVTIDNIKAFGEDFLADKLKPFLKSDPIPESNDGDVKIVVGNNFDEIVLDESKDVLLEVYAPWCGHCQALEPTYNKLAKHLRSIESIVVAKMDGTTNEHPRAKITVDVDRTVVAFYKFLKKHASIPFQLQNQPQLLKPIVGVLTSRRVRVAAQT*