Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040365.01.T01 | XP_003624926.1 | 99.109 | 449 | 4 | 0 | 47 | 495 | 1 | 449 | 0 | 941 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040365.01.T01 | P29514 | 98.423 | 444 | 7 | 0 | 47 | 490 | 1 | 444 | 0 | 926 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040365.01.T01 | G7L5V0 | 99.109 | 449 | 4 | 0 | 47 | 495 | 1 | 449 | 0.0 | 941 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048258.01 | MsG0780040365.01 | 0.807221 | 5.620478e-50 | 3.112922e-47 |
| MsG0080048996.01 | MsG0780040365.01 | 0.833407 | 5.430044e-56 | 6.247577e-53 |
| MsG0180000275.01 | MsG0780040365.01 | 0.829351 | 5.405420e-55 | 5.518882e-52 |
| MsG0180002486.01 | MsG0780040365.01 | 0.815881 | 7.364400e-52 | 5.139201e-49 |
| MsG0180003416.01 | MsG0780040365.01 | 0.804948 | 1.690618e-49 | 8.832797e-47 |
| MsG0180003485.01 | MsG0780040365.01 | 0.801095 | 1.058387e-48 | 5.011282e-46 |
| MsG0180004375.01 | MsG0780040365.01 | 0.879948 | 8.211633e-70 | 4.541013e-66 |
| MsG0180005002.01 | MsG0780040365.01 | 0.808153 | 3.562801e-50 | 2.021979e-47 |
| MsG0180006231.01 | MsG0780040365.01 | 0.838200 | 3.311808e-57 | 4.403529e-54 |
| MsG0780040365.01 | MsG0780040472.01 | 0.916278 | 2.159761e-85 | 5.894280e-81 |
| MsG0780040365.01 | MsG0780040509.01 | 0.815286 | 9.995236e-52 | 6.862522e-49 |
| MsG0780040365.01 | MsG0780040828.01 | 0.871592 | 6.076798e-67 | 2.465210e-63 |
| MsG0780040365.01 | MsG0780040830.01 | 0.804304 | 2.303659e-49 | 1.183685e-46 |
| MsG0780040365.01 | MsG0780041735.01 | 0.836805 | 7.542732e-57 | 9.611036e-54 |
| MsG0780040365.01 | MsG0880042791.01 | 0.814636 | 1.393035e-51 | 9.397230e-49 |
| MsG0780040365.01 | MsG0880043637.01 | 0.806413 | 8.327696e-50 | 4.517055e-47 |
| MsG0780040365.01 | MsG0880045430.01 | 0.802792 | 4.741069e-49 | 2.343582e-46 |
| MsG0780040365.01 | MsG0880046646.01 | 0.824376 | 8.345767e-54 | 7.379074e-51 |
| MsG0780040365.01 | MsG0880046991.01 | 0.806705 | 7.225301e-50 | 3.948510e-47 |
| MsG0780040365.01 | MsG0880047694.01 | 0.804401 | 2.198546e-49 | 1.132465e-46 |
| MsG0280010977.01 | MsG0780040365.01 | 0.808726 | 2.687771e-50 | 1.548319e-47 |
| MsG0380012818.01 | MsG0780040365.01 | 0.833234 | 5.995233e-56 | 6.862054e-53 |
| MsG0380014197.01 | MsG0780040365.01 | 0.823918 | 1.069377e-53 | 9.333668e-51 |
| MsG0380014799.01 | MsG0780040365.01 | 0.803496 | 3.390546e-49 | 1.706415e-46 |
| MsG0480020802.01 | MsG0780040365.01 | 0.816488 | 5.388423e-52 | 3.823191e-49 |
| MsG0480021719.01 | MsG0780040365.01 | 0.816656 | 4.942374e-52 | 3.523099e-49 |
| MsG0480021984.01 | MsG0780040365.01 | 0.833589 | 4.889179e-56 | 5.655911e-53 |
| MsG0480022783.01 | MsG0780040365.01 | 0.822549 | 2.232420e-53 | 1.874581e-50 |
| MsG0480022784.01 | MsG0780040365.01 | 0.808950 | 2.407855e-50 | 1.395333e-47 |
| MsG0480022998.01 | MsG0780040365.01 | 0.804377 | 2.224198e-49 | 1.145015e-46 |
| MsG0480023064.01 | MsG0780040365.01 | 0.802256 | 6.114495e-49 | 2.981366e-46 |
| MsG0480023146.01 | MsG0780040365.01 | 0.830915 | 2.243578e-55 | 2.397371e-52 |
| MsG0480023296.01 | MsG0780040365.01 | 0.813242 | 2.826783e-51 | 1.836042e-48 |
| MsG0580024060.01 | MsG0780040365.01 | 0.813447 | 2.548302e-51 | 1.664624e-48 |
| MsG0580024813.01 | MsG0780040365.01 | 0.800072 | 1.710597e-48 | 7.891382e-46 |
| MsG0580025186.01 | MsG0780040365.01 | 0.807646 | 4.566811e-50 | 2.557325e-47 |
| MsG0580025645.01 | MsG0780040365.01 | 0.806967 | 6.360301e-50 | 3.499493e-47 |
| MsG0380015350.01 | MsG0780040365.01 | 0.804109 | 2.528737e-49 | 1.292875e-46 |
| MsG0380015552.01 | MsG0780040365.01 | 0.818051 | 2.397796e-52 | 1.775723e-49 |
| MsG0380015825.01 | MsG0780040365.01 | 0.826969 | 2.025976e-54 | 1.929379e-51 |
| MsG0380016873.01 | MsG0780040365.01 | 0.812129 | 4.951037e-51 | 3.121856e-48 |
| MsG0580028923.01 | MsG0780040365.01 | 0.857544 | 1.518438e-62 | 3.761186e-59 |
| MsG0680030622.01 | MsG0780040365.01 | 0.814655 | 1.379496e-51 | 9.310605e-49 |
| MsG0280007419.01 | MsG0780040365.01 | 0.816118 | 6.520456e-52 | 4.580137e-49 |
| MsG0280008407.01 | MsG0780040365.01 | 0.806850 | 6.733822e-50 | 3.693857e-47 |
| MsG0280009866.01 | MsG0780040365.01 | 0.830875 | 2.295288e-55 | 2.449572e-52 |
| MsG0780035954.01 | MsG0780040365.01 | 0.818685 | 1.723130e-52 | 1.298586e-49 |
| MsG0780036941.01 | MsG0780040365.01 | 0.832005 | 1.209859e-55 | 1.335191e-52 |
| MsG0780037158.01 | MsG0780040365.01 | 0.802565 | 5.281775e-49 | 2.595577e-46 |
| MsG0780038393.01 | MsG0780040365.01 | 0.831391 | 1.713864e-55 | 1.857298e-52 |
| MsG0780039189.01 | MsG0780040365.01 | 0.823571 | 1.289275e-53 | 1.114274e-50 |
| MsG0780039878.01 | MsG0780040365.01 | 0.801682 | 8.023827e-49 | 3.855429e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780040365.01 | MsG0280007740.01 | PPI |
| MsG0780041735.01 | MsG0780040365.01 | PPI |
| MsG0780040365.01 | MsG0480018846.01 | PPI |
| MsG0780040365.01 | MsG0480018845.01 | PPI |
| MsG0780040365.01 | MsG0480022744.01 | PPI |
| MsG0780040365.01 | MsG0380017708.01 | PPI |
| MsG0480022744.01 | MsG0780040365.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040365.01.T01 | MTR_7g089120 | 99.109 | 449 | 4 | 0 | 47 | 495 | 1 | 449 | 0.0 | 941 |
| MsG0780040365.01.T01 | MTR_1g101130 | 97.209 | 430 | 12 | 0 | 47 | 476 | 1 | 430 | 0.0 | 856 |
| MsG0780040365.01.T01 | MTR_4g019090 | 96.512 | 430 | 15 | 0 | 47 | 476 | 1 | 430 | 0.0 | 853 |
| MsG0780040365.01.T01 | MTR_4g019110 | 95.814 | 430 | 18 | 0 | 47 | 476 | 1 | 430 | 0.0 | 848 |
| MsG0780040365.01.T01 | MTR_2g031310 | 95.349 | 430 | 20 | 0 | 47 | 476 | 1 | 430 | 0.0 | 845 |
| MsG0780040365.01.T01 | MTR_4g017630 | 94.186 | 430 | 25 | 0 | 47 | 476 | 1 | 430 | 0.0 | 837 |
| MsG0780040365.01.T01 | MTR_4g094535 | 93.953 | 430 | 26 | 0 | 47 | 476 | 1 | 430 | 0.0 | 834 |
| MsG0780040365.01.T01 | MTR_8g107250 | 91.236 | 445 | 38 | 1 | 47 | 490 | 1 | 445 | 0.0 | 832 |
| MsG0780040365.01.T01 | MTR_3g113970 | 93.519 | 432 | 26 | 1 | 47 | 476 | 1 | 432 | 0.0 | 832 |
| MsG0780040365.01.T01 | MTR_8g098360 | 92.326 | 430 | 33 | 0 | 47 | 476 | 1 | 430 | 0.0 | 822 |
| MsG0780040365.01.T01 | MTR_8g085980 | 41.244 | 434 | 245 | 3 | 47 | 470 | 1 | 434 | 6.77e-123 | 367 |
| MsG0780040365.01.T01 | MTR_3g110720 | 41.475 | 434 | 244 | 3 | 47 | 470 | 1 | 434 | 5.90e-122 | 364 |
| MsG0780040365.01.T01 | MTR_1g106005 | 40.789 | 456 | 250 | 5 | 47 | 489 | 1 | 449 | 1.11e-121 | 363 |
| MsG0780040365.01.T01 | MTR_4g097830 | 41.419 | 437 | 240 | 4 | 47 | 470 | 1 | 434 | 1.69e-121 | 363 |
| MsG0780040365.01.T01 | MTR_7g085800 | 40.553 | 434 | 248 | 3 | 47 | 470 | 1 | 434 | 7.12e-121 | 362 |
| MsG0780040365.01.T01 | MTR_6g029190 | 39.910 | 446 | 257 | 3 | 47 | 481 | 1 | 446 | 2.34e-118 | 355 |
| MsG0780040365.01.T01 | MTR_2g041670 | 37.029 | 451 | 271 | 5 | 47 | 488 | 1 | 447 | 6.57e-99 | 306 |
| MsG0780040365.01.T01 | MTR_2g041400 | 37.002 | 427 | 256 | 5 | 47 | 464 | 1 | 423 | 4.69e-95 | 295 |
| MsG0780040365.01.T01 | MTR_7g117050 | 34.932 | 438 | 268 | 7 | 48 | 469 | 3 | 439 | 7.40e-94 | 293 |
| MsG0780040365.01.T01 | MTR_3g063410 | 33.108 | 148 | 91 | 2 | 302 | 441 | 30 | 177 | 1.26e-26 | 107 |
| MsG0780040365.01.T01 | MTR_3g063410 | 31.343 | 134 | 84 | 2 | 316 | 441 | 5 | 138 | 1.05e-19 | 86.3 |
| MsG0780040365.01.T01 | MTR_4g093670 | 82.759 | 29 | 5 | 0 | 423 | 451 | 1 | 29 | 8.75e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040365.01.T01 | AT5G12250 | 98.423 | 444 | 7 | 0 | 47 | 490 | 1 | 444 | 0.0 | 926 |
| MsG0780040365.01.T01 | AT5G62700 | 96.279 | 430 | 16 | 0 | 47 | 476 | 1 | 430 | 0.0 | 853 |
| MsG0780040365.01.T01 | AT5G62690 | 96.279 | 430 | 16 | 0 | 47 | 476 | 1 | 430 | 0.0 | 853 |
| MsG0780040365.01.T01 | AT5G23860 | 96.744 | 430 | 14 | 0 | 47 | 476 | 1 | 430 | 0.0 | 853 |
| MsG0780040365.01.T01 | AT5G23860 | 96.744 | 430 | 14 | 0 | 47 | 476 | 1 | 430 | 0.0 | 853 |
| MsG0780040365.01.T01 | AT2G29550 | 95.824 | 431 | 18 | 0 | 47 | 477 | 1 | 431 | 0.0 | 847 |
| MsG0780040365.01.T01 | AT1G75780 | 94.432 | 431 | 23 | 1 | 47 | 476 | 1 | 431 | 0.0 | 837 |
| MsG0780040365.01.T01 | AT1G20010 | 93.039 | 431 | 29 | 1 | 47 | 476 | 1 | 431 | 0.0 | 830 |
| MsG0780040365.01.T01 | AT5G44340 | 92.558 | 430 | 32 | 0 | 47 | 476 | 1 | 430 | 0.0 | 827 |
| MsG0780040365.01.T01 | AT4G20890 | 92.558 | 430 | 32 | 0 | 47 | 476 | 1 | 430 | 0.0 | 825 |
| MsG0780040365.01.T01 | AT1G64740 | 41.244 | 434 | 245 | 3 | 47 | 470 | 1 | 434 | 2.85e-123 | 368 |
| MsG0780040365.01.T01 | AT5G19780 | 41.244 | 434 | 245 | 3 | 47 | 470 | 1 | 434 | 5.01e-123 | 367 |
| MsG0780040365.01.T01 | AT5G19770 | 41.244 | 434 | 245 | 3 | 47 | 470 | 1 | 434 | 5.01e-123 | 367 |
| MsG0780040365.01.T01 | AT1G04820 | 41.648 | 437 | 239 | 4 | 47 | 470 | 1 | 434 | 4.34e-121 | 362 |
| MsG0780040365.01.T01 | AT1G50010 | 41.648 | 437 | 239 | 4 | 47 | 470 | 1 | 434 | 4.34e-121 | 362 |
| MsG0780040365.01.T01 | AT4G14960 | 41.475 | 434 | 244 | 3 | 47 | 470 | 1 | 434 | 5.51e-121 | 362 |
| MsG0780040365.01.T01 | AT4G14960 | 41.645 | 389 | 211 | 4 | 47 | 422 | 1 | 386 | 2.02e-101 | 311 |
| MsG0780040365.01.T01 | AT5G05620 | 35.160 | 438 | 267 | 7 | 48 | 469 | 3 | 439 | 3.11e-94 | 294 |
| MsG0780040365.01.T01 | AT3G61650 | 35.160 | 438 | 267 | 7 | 48 | 469 | 3 | 439 | 4.68e-94 | 293 |
Find 160 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGATATCTTTATTGAAAT+TGG | 0.075330 | 7:-76513177 | None:intergenic |
| CTTCGCTCTGTTGTCCAAAT+TGG | 0.193911 | 7:-76512894 | None:intergenic |
| ACCAGATCGGTTCAAAATTC+TGG | 0.202910 | 7:+76510574 | MsG0780040365.01.T01:CDS |
| CCCTCGTCTGCACTTCTTCA+TGG | 0.225491 | 7:+76512181 | MsG0780040365.01.T01:CDS |
| TCCATGGCCTCCACCTTTAT+TGG | 0.234232 | 7:+76512485 | MsG0780040365.01.T01:CDS |
| ACACTTGATTTAACATTGTT+TGG | 0.235866 | 7:-76512437 | None:intergenic |
| TGAGATTCACAGCCAGTTTC+CGG | 0.253872 | 7:-76512151 | None:intergenic |
| CATTTGCTCATCCACCTCTT+TGG | 0.277735 | 7:-76512369 | None:intergenic |
| CACATCTGCTGGGTGAGTTC+TGG | 0.279765 | 7:-76512260 | None:intergenic |
| TGGTAACTCAACCTCAATTC+AGG | 0.292483 | 7:+76512505 | MsG0780040365.01.T01:CDS |
| GTTAACAGTATTTATATAAC+TGG | 0.317482 | 7:-76513279 | None:intergenic |
| TTGTTTCTTATATCTGCTAT+TGG | 0.318496 | 7:+76512992 | MsG0780040365.01.T01:three_prime_UTR |
| TATGAAACAAATGGGAGTTT+AGG | 0.325744 | 7:+76513207 | MsG0780040365.01.T01:three_prime_UTR |
| TGACCGAAGACGAAGTTATC+AGG | 0.336132 | 7:-76510792 | None:intergenic |
| TGAGGTTGAGTTACCAATAA+AGG | 0.339217 | 7:-76512498 | None:intergenic |
| TCCTTTCGCCCAATTGTTAC+CGG | 0.341476 | 7:-76510823 | None:intergenic |
| TTCGCTCTGTTGTCCAAATT+GGG | 0.342585 | 7:-76512893 | None:intergenic |
| CCTCAATTCAGGAAATGTTT+AGG | 0.342965 | 7:+76512516 | MsG0780040365.01.T01:CDS |
| TCTTTGAATCCCACATCTGC+TGG | 0.343079 | 7:-76512271 | None:intergenic |
| ATCTATTTGTTTCTGTATGT+TGG | 0.344897 | 7:+76512960 | MsG0780040365.01.T01:three_prime_UTR |
| CGCTTTATGATATCTGCTTC+AGG | 0.346443 | 7:+76511238 | MsG0780040365.01.T01:CDS |
| AGTCCGGTGCCGGTAACAAT+TGG | 0.346744 | 7:+76510814 | MsG0780040365.01.T01:CDS |
| GTTTCAGGTGTGTCATTCAT+TGG | 0.347553 | 7:+76511017 | MsG0780040365.01.T01:CDS |
| TCACTGCTTCTGCTATGTTC+AGG | 0.349699 | 7:+76512333 | MsG0780040365.01.T01:CDS |
| GAGAATTGTGATTGTCTTCA+AGG | 0.350951 | 7:+76510906 | MsG0780040365.01.T01:CDS |
| CACTTGATTTAACATTGTTT+GGG | 0.358488 | 7:-76512436 | None:intergenic |
| AACATACAGAAACAAATAGA+TGG | 0.359403 | 7:-76512958 | None:intergenic |
| ATAGGAATGACAAACTATTA+AGG | 0.365870 | 7:-76513024 | None:intergenic |
| TTGGGAGGAGGAACGGGATC+TGG | 0.367167 | 7:+76511036 | MsG0780040365.01.T01:CDS |
| CAACTCTGATCTCCGGAAAC+TGG | 0.369333 | 7:+76512139 | MsG0780040365.01.T01:CDS |
| TAGATATCTTTATTGAAATT+GGG | 0.371721 | 7:-76513176 | None:intergenic |
| ACAGAAAGAGTAGCATTATA+AGG | 0.371726 | 7:-76511165 | None:intergenic |
| AAACTCCCATTTGTTTCATA+AGG | 0.378512 | 7:-76513204 | None:intergenic |
| AGAAGTCCTTATGAAACAAA+TGG | 0.391777 | 7:+76513198 | MsG0780040365.01.T01:three_prime_UTR |
| TTTCAGGTGTGTCATTCATT+GGG | 0.392158 | 7:+76511018 | MsG0780040365.01.T01:CDS |
| AGTAGGAAGAGTTCTTGTTC+TGG | 0.394999 | 7:-76512400 | None:intergenic |
| CACTGCTTCTGCTATGTTCA+GGG | 0.398975 | 7:+76512334 | MsG0780040365.01.T01:CDS |
| AGCAATTTACTGCTATGTTT+AGG | 0.401883 | 7:+76512549 | MsG0780040365.01.T01:CDS |
| AGAGAATGGAGATCCCAATT+TGG | 0.413216 | 7:+76512880 | MsG0780040365.01.T01:three_prime_UTR |
| CCTAAACATTTCCTGAATTG+AGG | 0.415373 | 7:-76512516 | None:intergenic |
| TTGTAATTAGCTTGATTTGA+GGG | 0.422055 | 7:+76512834 | MsG0780040365.01.T01:three_prime_UTR |
| CGCCCAATTGTTACCGGCAC+CGG | 0.422209 | 7:-76510817 | None:intergenic |
| ACTTGCTGTCTTCGTTTCCC+TGG | 0.423010 | 7:+76512110 | MsG0780040365.01.T01:CDS |
| AGAGAAATTCTTCATGTTCA+AGG | 0.425268 | 7:+76510537 | MsG0780040365.01.T01:CDS |
| TGAGTTTCCGACGTATCTTC+CGG | 0.427531 | 7:-76510631 | None:intergenic |
| CCAGATCGGTTCAAAATTCT+GGG | 0.430206 | 7:+76510575 | MsG0780040365.01.T01:CDS |
| ACGCGCCATCCTCATGGACT+TGG | 0.430677 | 7:+76510716 | MsG0780040365.01.T01:CDS |
| AACGTCAACATCATCCTATC+AGG | 0.441581 | 7:-76511099 | None:intergenic |
| CATTCATTGGGAGGAGGAAC+GGG | 0.442118 | 7:+76511030 | MsG0780040365.01.T01:CDS |
| AACTTCGTCTTCGGTCAGTC+CGG | 0.442188 | 7:+76510798 | MsG0780040365.01.T01:CDS |
| CGTCTGCACTTCTTCATGGT+CGG | 0.448628 | 7:+76512185 | MsG0780040365.01.T01:CDS |
| TACTCTTTCTGTTCATCAGT+TGG | 0.454328 | 7:+76511176 | MsG0780040365.01.T01:CDS |
| ACCAATAAAGGTGGAGGCCA+TGG | 0.456675 | 7:-76512486 | None:intergenic |
| AGGAGGAACGGGATCTGGAA+TGG | 0.458058 | 7:+76511041 | MsG0780040365.01.T01:CDS |
| CAGTGGCATCCTGGTACTGC+TGG | 0.458734 | 7:-76512667 | None:intergenic |
| TAAACCGCGCATATATCTAT+TGG | 0.461114 | 7:+76513138 | MsG0780040365.01.T01:three_prime_UTR |
| ATCCTCATGGACTTGGAGCC+TGG | 0.462721 | 7:+76510723 | MsG0780040365.01.T01:CDS |
| TACTGCTATGTTTAGGAGGA+AGG | 0.463039 | 7:+76512556 | MsG0780040365.01.T01:CDS |
| GGAGGAACGGGATCTGGAAT+GGG | 0.463459 | 7:+76511042 | MsG0780040365.01.T01:CDS |
| CGAGCTGGATGTGGAGAGAA+TGG | 0.463675 | 7:+76512866 | MsG0780040365.01.T01:three_prime_UTR |
| ATGCGCGGTTTAACGTTGTT+CGG | 0.467077 | 7:-76513127 | None:intergenic |
| GGACTTGGAGCCTGGTACAA+TGG | 0.467426 | 7:+76510731 | MsG0780040365.01.T01:CDS |
| CGTCCTGATAACTTCGTCTT+CGG | 0.467522 | 7:+76510789 | MsG0780040365.01.T01:CDS |
| CTTCATCAGCAGTGGCATCC+TGG | 0.470075 | 7:-76512676 | None:intergenic |
| TTCGGTGTTTCCTTCACCGA+AGG | 0.475471 | 7:+76511122 | MsG0780040365.01.T01:CDS |
| AAGAAGTGCAGACGAGGGAA+TGG | 0.475598 | 7:-76512176 | None:intergenic |
| GGAGGAAGGCTTTCTTGCAT+TGG | 0.483915 | 7:+76512570 | MsG0780040365.01.T01:CDS |
| GAACAATTTGAACAGTGAAA+CGG | 0.485922 | 7:-76510498 | None:intergenic |
| GTCTTCGGTCAGTCCGGTGC+CGG | 0.488348 | 7:+76510804 | MsG0780040365.01.T01:CDS |
| GAAGTCCTTATGAAACAAAT+GGG | 0.491222 | 7:+76513199 | MsG0780040365.01.T01:three_prime_UTR |
| AAGCTAATTACAAAGGATAG+AGG | 0.493459 | 7:-76512824 | None:intergenic |
| GTCCGGTGCCGGTAACAATT+GGG | 0.494376 | 7:+76510815 | MsG0780040365.01.T01:CDS |
| GCTTTCTTGCATTGGTACAC+TGG | 0.499379 | 7:+76512578 | MsG0780040365.01.T01:CDS |
| TGTTCCACGCGCCATCCTCA+TGG | 0.500720 | 7:+76510710 | MsG0780040365.01.T01:CDS |
| ATATGAGGACGACGAGGAAG+AGG | 0.503486 | 7:+76512706 | MsG0780040365.01.T01:CDS |
| CAGAACTCACCCAGCAGATG+TGG | 0.503870 | 7:+76512261 | MsG0780040365.01.T01:CDS |
| TTAGAGAGGAATATCCTGAT+AGG | 0.506228 | 7:+76511085 | MsG0780040365.01.T01:CDS |
| GTCAACTCAACTCTGATCTC+CGG | 0.506307 | 7:+76512132 | MsG0780040365.01.T01:CDS |
| ATTTAGTATCGAGCTGGATG+TGG | 0.508405 | 7:+76512857 | MsG0780040365.01.T01:three_prime_UTR |
| TGATGTGTGCTGCTGATCCT+AGG | 0.510462 | 7:+76512297 | MsG0780040365.01.T01:CDS |
| AGATCAGAGTTGAGTTGACC+AGG | 0.512852 | 7:-76512128 | None:intergenic |
| CAGGTGTGTCATTCATTGGG+AGG | 0.513562 | 7:+76511021 | MsG0780040365.01.T01:CDS |
| CTTTGAATCCCACATCTGCT+GGG | 0.514522 | 7:-76512270 | None:intergenic |
| AGCTCAACTTAGCTTGTCAA+AGG | 0.516394 | 7:+76513242 | MsG0780040365.01.T01:three_prime_UTR |
| CTCATCTTCATCACTATCAC+AGG | 0.518767 | 7:+76510406 | MsG0780040365.01.T01:CDS |
| TGAGGGATTTAGTATCGAGC+TGG | 0.519681 | 7:+76512851 | MsG0780040365.01.T01:three_prime_UTR |
| TTGCATTGGTACACTGGTGA+AGG | 0.524227 | 7:+76512584 | MsG0780040365.01.T01:CDS |
| GAAACAAATGGGAGTTTAGG+TGG | 0.526246 | 7:+76513210 | MsG0780040365.01.T01:three_prime_UTR |
| AGAAGTGCAGACGAGGGAAT+GGG | 0.530868 | 7:-76512175 | None:intergenic |
| CGAACACTGTCCATTGTACC+AGG | 0.531519 | 7:-76510741 | None:intergenic |
| TCATTCATTGGGAGGAGGAA+CGG | 0.532913 | 7:+76511029 | MsG0780040365.01.T01:CDS |
| TGATGAAGAAGGAGAATATG+AGG | 0.535322 | 7:+76512691 | MsG0780040365.01.T01:CDS |
| TTTCCGACGTATCTTCCGGT+TGG | 0.537588 | 7:-76510627 | None:intergenic |
| GTCTGAGTACCAGCAGTACC+AGG | 0.537588 | 7:+76512658 | MsG0780040365.01.T01:CDS |
| ACTCTTCCTACTTTGTTGAG+TGG | 0.537980 | 7:+76512411 | MsG0780040365.01.T01:CDS |
| AGAAAATGCTGATGAGTGTA+TGG | 0.538616 | 7:+76511200 | MsG0780040365.01.T01:CDS |
| GATGCCACTGCTGATGAAGA+AGG | 0.543436 | 7:+76512680 | MsG0780040365.01.T01:CDS |
| GCCGGTAACAATTGGGCGAA+AGG | 0.544358 | 7:+76510822 | MsG0780040365.01.T01:CDS |
| AGTGTTCGCACTGGTCCTTA+CGG | 0.544816 | 7:+76510756 | MsG0780040365.01.T01:CDS |
| CACGGTATTGCTGAGAGCCA+CGG | 0.544884 | 7:-76512226 | None:intergenic |
| ATGTTCAAGGAGGACAATGC+GGG | 0.546684 | 7:+76510550 | MsG0780040365.01.T01:CDS |
| AATTTACTGCTATGTTTAGG+AGG | 0.549323 | 7:+76512552 | MsG0780040365.01.T01:CDS |
| TGGTGAAGGCATGGATGAGA+TGG | 0.552982 | 7:+76512598 | MsG0780040365.01.T01:CDS |
| ACGGTATTGCTGAGAGCCAC+GGG | 0.554335 | 7:-76512225 | None:intergenic |
| TTTGTAATTAGCTTGATTTG+AGG | 0.554453 | 7:+76512833 | MsG0780040365.01.T01:three_prime_UTR |
| GTGAGGTAGCGACCATGCCT+AGG | 0.560055 | 7:-76512314 | None:intergenic |
| TTCTCCTTCTTCATCAGCAG+TGG | 0.564039 | 7:-76512684 | None:intergenic |
| CAATTCAGGAAATGTTTAGG+AGG | 0.566101 | 7:+76512519 | MsG0780040365.01.T01:CDS |
| ACCATGAAGAAGTGCAGACG+AGG | 0.568203 | 7:-76512182 | None:intergenic |
| TGCTCCTCGAGGTCTCTCCA+TGG | 0.570432 | 7:+76512469 | MsG0780040365.01.T01:CDS |
| GTATCAGAAACCTTCGGTGA+AGG | 0.572045 | 7:-76511132 | None:intergenic |
| GTTGATTTCGAAGATTAGAG+AGG | 0.576526 | 7:+76511071 | MsG0780040365.01.T01:CDS |
| TGGGATCCACTCAACAAAGT+AGG | 0.583322 | 7:-76512417 | None:intergenic |
| ACAACAGTATCAGAAACCTT+CGG | 0.584973 | 7:-76511138 | None:intergenic |
| TTGGTACACTGGTGAAGGCA+TGG | 0.586360 | 7:+76512589 | MsG0780040365.01.T01:CDS |
| TGAGTTACCAATAAAGGTGG+AGG | 0.588019 | 7:-76512492 | None:intergenic |
| GAGCACGGCATAGATCCAAC+CGG | 0.589745 | 7:+76510612 | MsG0780040365.01.T01:CDS |
| GAAGTAGTTTGCGACGAGCA+CGG | 0.593265 | 7:+76510597 | MsG0780040365.01.T01:CDS |
| ACAACGAAGCCTCCTGTGGA+AGG | 0.594540 | 7:+76510685 | MsG0780040365.01.T01:CDS |
| GTGTGTCATTCATTGGGAGG+AGG | 0.596369 | 7:+76511024 | MsG0780040365.01.T01:CDS |
| GGACAATGCGGGAACCAGAT+CGG | 0.597537 | 7:+76510561 | MsG0780040365.01.T01:CDS |
| TCAAATCAAGCTAATTACAA+AGG | 0.597696 | 7:-76512831 | None:intergenic |
| TTTGCTCCTCTCACATCCCG+TGG | 0.599145 | 7:+76512209 | MsG0780040365.01.T01:CDS |
| TTGATCTCAGCAACCATGAG+TGG | 0.599833 | 7:+76512083 | MsG0780040365.01.T01:CDS |
| TCATGGTTGCTGAGATCAAG+TGG | 0.601262 | 7:-76512079 | None:intergenic |
| GCGTGGAACAAACCTTCCAC+AGG | 0.601663 | 7:-76510697 | None:intergenic |
| TAAGATGAGCACCAAAGAGG+TGG | 0.605176 | 7:+76512358 | MsG0780040365.01.T01:CDS |
| GGTTGAGTTACCAATAAAGG+TGG | 0.607360 | 7:-76512495 | None:intergenic |
| CAATTTGGACAACAGAGCGA+AGG | 0.608406 | 7:+76512895 | MsG0780040365.01.T01:three_prime_UTR |
| AATTCAGGAAATGTTTAGGA+GGG | 0.609115 | 7:+76512520 | MsG0780040365.01.T01:CDS |
| ACATACAGAAACAAATAGAT+GGG | 0.609432 | 7:-76512957 | None:intergenic |
| ACTGCTTCTGCTATGTTCAG+GGG | 0.609605 | 7:+76512335 | MsG0780040365.01.T01:CDS |
| ACAATGGACAGTGTTCGCAC+TGG | 0.609664 | 7:+76510747 | MsG0780040365.01.T01:CDS |
| ACAGCAAGTCACTCCACTCA+TGG | 0.610966 | 7:-76512096 | None:intergenic |
| AGGCTCCAAGTCCATGAGGA+TGG | 0.616165 | 7:-76510721 | None:intergenic |
| AGAACTCACCCAGCAGATGT+GGG | 0.617381 | 7:+76512262 | MsG0780040365.01.T01:CDS |
| TGTGCTGCTGATCCTAGGCA+TGG | 0.620259 | 7:+76512302 | MsG0780040365.01.T01:CDS |
| GCGAAAGGACATTATACTGA+AGG | 0.631149 | 7:+76510837 | MsG0780040365.01.T01:CDS |
| GGACGGAAGATCTGACCGTA+AGG | 0.631185 | 7:-76510771 | None:intergenic |
| GTTTGTGACATTGCTCCTCG+AGG | 0.633730 | 7:+76512458 | MsG0780040365.01.T01:CDS |
| TACTACAACGAAGCCTCCTG+TGG | 0.636492 | 7:+76510681 | MsG0780040365.01.T01:CDS |
| AAGTCCATGAGGATGGCGCG+TGG | 0.636612 | 7:-76510714 | None:intergenic |
| AATTTGGACAACAGAGCGAA+GGG | 0.638625 | 7:+76512896 | MsG0780040365.01.T01:three_prime_UTR |
| TGAGAGCCACGGGATGTGAG+AGG | 0.640513 | 7:-76512215 | None:intergenic |
| TGGAACAAACCTTCCACAGG+AGG | 0.640659 | 7:-76510694 | None:intergenic |
| GTGTATGGTTCTTGATAATG+AGG | 0.647671 | 7:+76511215 | MsG0780040365.01.T01:CDS |
| CATGTTCAAGGAGGACAATG+CGG | 0.653004 | 7:+76510549 | MsG0780040365.01.T01:CDS |
| GAGGCCATGGAGAGACCTCG+AGG | 0.661607 | 7:-76512473 | None:intergenic |
| GATCAGAGTTGAGTTGACCA+GGG | 0.663540 | 7:-76512127 | None:intergenic |
| CCATGAAGAAGTGCAGACGA+GGG | 0.668664 | 7:-76512181 | None:intergenic |
| GGGTAAGATGAGCACCAAAG+AGG | 0.672077 | 7:+76512355 | MsG0780040365.01.T01:CDS |
| CGAAGACGAAGTTATCAGGA+CGG | 0.676420 | 7:-76510788 | None:intergenic |
| GAAATTCTTCATGTTCAAGG+AGG | 0.679770 | 7:+76510540 | MsG0780040365.01.T01:CDS |
| GTTCTGGAACAGTCAATGCA+CGG | 0.686386 | 7:-76512244 | None:intergenic |
| TACCAGGCTCCAAGTCCATG+AGG | 0.693763 | 7:-76510725 | None:intergenic |
| TGAACATAGCAGAAGCAGTG+AGG | 0.698439 | 7:-76512331 | None:intergenic |
| GATCCAACCGGAAGATACGT+CGG | 0.698972 | 7:+76510624 | MsG0780040365.01.T01:CDS |
| ATCACCAATAGATATATGCG+CGG | 0.704907 | 7:-76513142 | None:intergenic |
| AGGAGAATATGAGGACGACG+AGG | 0.722154 | 7:+76512700 | MsG0780040365.01.T01:CDS |
| ACTGCTGGTACTCAGACACG+AGG | 0.785475 | 7:-76512652 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAGTCAGATTAAATTT+AGG | - | Chr7:76511940-76511959 | None:intergenic | 15.0% |
| !! | GAAACATAATAACATTAAAA+TGG | - | Chr7:76511646-76511665 | None:intergenic | 15.0% |
| !! | TAAACTTATATTTACACTTT+GGG | + | Chr7:76511731-76511750 | MsG0780040365.01.T01:intron | 15.0% |
| !! | TAGATATCTTTATTGAAATT+GGG | - | Chr7:76513179-76513198 | None:intergenic | 15.0% |
| !! | TTAAACTTATATTTACACTT+TGG | + | Chr7:76511730-76511749 | MsG0780040365.01.T01:intron | 15.0% |
| !! | AATTTGATTGTTCACAAATT+GGG | + | Chr7:76511974-76511993 | MsG0780040365.01.T01:intron | 20.0% |
| !! | CTAGATATCTTTATTGAAAT+TGG | - | Chr7:76513180-76513199 | None:intergenic | 20.0% |
| !! | GTTAACAGTATTTATATAAC+TGG | - | Chr7:76513282-76513301 | None:intergenic | 20.0% |
| !!! | ATGTTAATGATTCATTTTTC+TGG | + | Chr7:76511842-76511861 | MsG0780040365.01.T01:intron | 20.0% |
| !!! | GTGATTTTGTGATTTTTTTA+GGG | + | Chr7:76510995-76511014 | MsG0780040365.01.T01:intron | 20.0% |
| !!! | TGTGATTTTGTGATTTTTTT+AGG | + | Chr7:76510994-76511013 | MsG0780040365.01.T01:intron | 20.0% |
| ! | AACATACAGAAACAAATAGA+TGG | - | Chr7:76512961-76512980 | None:intergenic | 25.0% |
| ! | ACACTTGATTTAACATTGTT+TGG | - | Chr7:76512440-76512459 | None:intergenic | 25.0% |
| ! | ACATACAGAAACAAATAGAT+GGG | - | Chr7:76512960-76512979 | None:intergenic | 25.0% |
| ! | ATAGGAATGACAAACTATTA+AGG | - | Chr7:76513027-76513046 | None:intergenic | 25.0% |
| ! | ATTAATTAGATCAGACTTCT+TGG | + | Chr7:76511396-76511415 | MsG0780040365.01.T01:intron | 25.0% |
| ! | CACTTGATTTAACATTGTTT+GGG | - | Chr7:76512439-76512458 | None:intergenic | 25.0% |
| ! | GAATTTGATTGTTCACAAAT+TGG | + | Chr7:76511973-76511992 | MsG0780040365.01.T01:intron | 25.0% |
| ! | TCAAATCAAGCTAATTACAA+AGG | - | Chr7:76512834-76512853 | None:intergenic | 25.0% |
| ! | TGAAAATCTTGATTCTGTTA+TGG | + | Chr7:76510951-76510970 | MsG0780040365.01.T01:intron | 25.0% |
| ! | TTGTGGTAATTATTGAATAG+TGG | + | Chr7:76511423-76511442 | MsG0780040365.01.T01:intron | 25.0% |
| !! | TTGTAATTAGCTTGATTTGA+GGG | + | Chr7:76512834-76512853 | MsG0780040365.01.T01:three_prime_UTR | 25.0% |
| !! | TTGTTTCTTATATCTGCTAT+TGG | + | Chr7:76512992-76513011 | MsG0780040365.01.T01:three_prime_UTR | 25.0% |
| !! | TTTGTAATTAGCTTGATTTG+AGG | + | Chr7:76512833-76512852 | MsG0780040365.01.T01:three_prime_UTR | 25.0% |
| !!! | ATCTATTTGTTTCTGTATGT+TGG | + | Chr7:76512960-76512979 | MsG0780040365.01.T01:three_prime_UTR | 25.0% |
| !!! | GTCAGATTAGTTTTCTATTT+TGG | + | Chr7:76511517-76511536 | MsG0780040365.01.T01:intron | 25.0% |
| !!! | TCATTTTTCTGGTTCAATTA+TGG | + | Chr7:76511853-76511872 | MsG0780040365.01.T01:intron | 25.0% |
| AAACTCCCATTTGTTTCATA+AGG | - | Chr7:76513207-76513226 | None:intergenic | 30.0% | |
| AAATCTTGATTCTGTTATGG+CGG | + | Chr7:76510954-76510973 | MsG0780040365.01.T01:intron | 30.0% | |
| AAGCTAATTACAAAGGATAG+AGG | - | Chr7:76512827-76512846 | None:intergenic | 30.0% | |
| AATTCAGGAAATGTTTAGGA+GGG | + | Chr7:76512520-76512539 | MsG0780040365.01.T01:CDS | 30.0% | |
| AATTTACTGCTATGTTTAGG+AGG | + | Chr7:76512552-76512571 | MsG0780040365.01.T01:CDS | 30.0% | |
| ACAGAAAGAGTAGCATTATA+AGG | - | Chr7:76511168-76511187 | None:intergenic | 30.0% | |
| AGAAGTCCTTATGAAACAAA+TGG | + | Chr7:76513198-76513217 | MsG0780040365.01.T01:three_prime_UTR | 30.0% | |
| AGAGAAATTCTTCATGTTCA+AGG | + | Chr7:76510537-76510556 | MsG0780040365.01.T01:CDS | 30.0% | |
| AGCAATTTACTGCTATGTTT+AGG | + | Chr7:76512549-76512568 | MsG0780040365.01.T01:CDS | 30.0% | |
| ATGTGAAAAAAGTCATGCAT+AGG | - | Chr7:76513045-76513064 | None:intergenic | 30.0% | |
| GAACAATTTGAACAGTGAAA+CGG | - | Chr7:76510501-76510520 | None:intergenic | 30.0% | |
| GAAGTCCTTATGAAACAAAT+GGG | + | Chr7:76513199-76513218 | MsG0780040365.01.T01:three_prime_UTR | 30.0% | |
| TATGAAACAAATGGGAGTTT+AGG | + | Chr7:76513207-76513226 | MsG0780040365.01.T01:three_prime_UTR | 30.0% | |
| TATGTTTCAGTTTACTGATC+TGG | + | Chr7:76511658-76511677 | MsG0780040365.01.T01:intron | 30.0% | |
| TGGTGATTCTTAACTACTAA+TGG | + | Chr7:76511873-76511892 | MsG0780040365.01.T01:intron | 30.0% | |
| ! | ACATTTTCCGTTTTCAGTAA+TGG | - | Chr7:76512029-76512048 | None:intergenic | 30.0% |
| ! | TTTTCTCATTGAGCACTTTT+CGG | + | Chr7:76511902-76511921 | MsG0780040365.01.T01:intron | 30.0% |
| ! | TTTTTCGTTGTTCATCACTA+GGG | + | Chr7:76511322-76511341 | MsG0780040365.01.T01:intron | 30.0% |
| !!! | ATGCATGACTTTTTTCACAT+TGG | + | Chr7:76513045-76513064 | MsG0780040365.01.T01:three_prime_UTR | 30.0% |
| !!! | TGTGATTTTTTTAGGGTTTC+AGG | + | Chr7:76511002-76511021 | MsG0780040365.01.T01:intron | 30.0% |
| ACAACAGTATCAGAAACCTT+CGG | - | Chr7:76511141-76511160 | None:intergenic | 35.0% | |
| AGAAAATGCTGATGAGTGTA+TGG | + | Chr7:76511200-76511219 | MsG0780040365.01.T01:CDS | 35.0% | |
| AGAGAAAAATACTCACAGCT+AGG | - | Chr7:76511282-76511301 | None:intergenic | 35.0% | |
| AGTTTACTGATCTGGTTAGT+GGG | + | Chr7:76511666-76511685 | MsG0780040365.01.T01:intron | 35.0% | |
| ATCACCAATAGATATATGCG+CGG | - | Chr7:76513145-76513164 | None:intergenic | 35.0% | |
| ATGAATGCATCATGTGACTA+TGG | + | Chr7:76511812-76511831 | MsG0780040365.01.T01:intron | 35.0% | |
| CAATTCAGGAAATGTTTAGG+AGG | + | Chr7:76512519-76512538 | MsG0780040365.01.T01:CDS | 35.0% | |
| CCTAAACATTTCCTGAATTG+AGG | - | Chr7:76512519-76512538 | None:intergenic | 35.0% | |
| CCTCAATTCAGGAAATGTTT+AGG | + | Chr7:76512516-76512535 | MsG0780040365.01.T01:CDS | 35.0% | |
| CTGTTTGCCATTACTGAAAA+CGG | + | Chr7:76512019-76512038 | MsG0780040365.01.T01:intron | 35.0% | |
| GAAATTCTTCATGTTCAAGG+AGG | + | Chr7:76510540-76510559 | MsG0780040365.01.T01:CDS | 35.0% | |
| GAGAATTGTGATTGTCTTCA+AGG | + | Chr7:76510906-76510925 | MsG0780040365.01.T01:CDS | 35.0% | |
| TAAACCGCGCATATATCTAT+TGG | + | Chr7:76513138-76513157 | MsG0780040365.01.T01:three_prime_UTR | 35.0% | |
| TACTCTTTCTGTTCATCAGT+TGG | + | Chr7:76511176-76511195 | MsG0780040365.01.T01:CDS | 35.0% | |
| TGAGGTTGAGTTACCAATAA+AGG | - | Chr7:76512501-76512520 | None:intergenic | 35.0% | |
| TGATGAAGAAGGAGAATATG+AGG | + | Chr7:76512691-76512710 | MsG0780040365.01.T01:CDS | 35.0% | |
| TTAGAGAGGAATATCCTGAT+AGG | + | Chr7:76511085-76511104 | MsG0780040365.01.T01:CDS | 35.0% | |
| ! | GTTGATTTCGAAGATTAGAG+AGG | + | Chr7:76511071-76511090 | MsG0780040365.01.T01:CDS | 35.0% |
| ! | TAGGATGATGTTGACGTTTT+CGG | + | Chr7:76511104-76511123 | MsG0780040365.01.T01:CDS | 35.0% |
| ! | TGACTGATTCTAGATGTTCA+AGG | + | Chr7:76511595-76511614 | MsG0780040365.01.T01:intron | 35.0% |
| ! | TTTCAGGTGTGTCATTCATT+GGG | + | Chr7:76511018-76511037 | MsG0780040365.01.T01:CDS | 35.0% |
| ! | TTTTCGTTGTTCATCACTAG+GGG | + | Chr7:76511323-76511342 | MsG0780040365.01.T01:intron | 35.0% |
| !! | AAGCGTTGAACAATTGCAAT+AGG | - | Chr7:76511773-76511792 | None:intergenic | 35.0% |
| !! | CTTTTTCGTTGTTCATCACT+AGG | + | Chr7:76511321-76511340 | MsG0780040365.01.T01:intron | 35.0% |
| !! | GTGTATGGTTCTTGATAATG+AGG | + | Chr7:76511215-76511234 | MsG0780040365.01.T01:CDS | 35.0% |
| AACGTCAACATCATCCTATC+AGG | - | Chr7:76511102-76511121 | None:intergenic | 40.0% | |
| AATTTGGACAACAGAGCGAA+GGG | + | Chr7:76512896-76512915 | MsG0780040365.01.T01:three_prime_UTR | 40.0% | |
| ACTCTTCCTACTTTGTTGAG+TGG | + | Chr7:76512411-76512430 | MsG0780040365.01.T01:CDS | 40.0% | |
| AGAGAATGGAGATCCCAATT+TGG | + | Chr7:76512880-76512899 | MsG0780040365.01.T01:three_prime_UTR | 40.0% | |
| AGTAGGAAGAGTTCTTGTTC+TGG | - | Chr7:76512403-76512422 | None:intergenic | 40.0% | |
| CAGTTTACTGATCTGGTTAG+TGG | + | Chr7:76511665-76511684 | MsG0780040365.01.T01:intron | 40.0% | |
| CGCTTTATGATATCTGCTTC+AGG | + | Chr7:76511238-76511257 | MsG0780040365.01.T01:CDS | 40.0% | |
| CTCATCTTCATCACTATCAC+AGG | + | Chr7:76510406-76510425 | MsG0780040365.01.T01:CDS | 40.0% | |
| GAAACAAATGGGAGTTTAGG+TGG | + | Chr7:76513210-76513229 | MsG0780040365.01.T01:three_prime_UTR | 40.0% | |
| GCGAAAGGACATTATACTGA+AGG | + | Chr7:76510837-76510856 | MsG0780040365.01.T01:CDS | 40.0% | |
| GGTTGAGTTACCAATAAAGG+TGG | - | Chr7:76512498-76512517 | None:intergenic | 40.0% | |
| TACTGCTATGTTTAGGAGGA+AGG | + | Chr7:76512556-76512575 | MsG0780040365.01.T01:CDS | 40.0% | |
| TGAGTTACCAATAAAGGTGG+AGG | - | Chr7:76512495-76512514 | None:intergenic | 40.0% | |
| TGGTAACTCAACCTCAATTC+AGG | + | Chr7:76512505-76512524 | MsG0780040365.01.T01:CDS | 40.0% | |
| TTCGCTCTGTTGTCCAAATT+GGG | - | Chr7:76512896-76512915 | None:intergenic | 40.0% | |
| ! | ACCAGATCGGTTCAAAATTC+TGG | + | Chr7:76510574-76510593 | MsG0780040365.01.T01:CDS | 40.0% |
| ! | ATTTAGTATCGAGCTGGATG+TGG | + | Chr7:76512857-76512876 | MsG0780040365.01.T01:three_prime_UTR | 40.0% |
| ! | CCAGATCGGTTCAAAATTCT+GGG | + | Chr7:76510575-76510594 | MsG0780040365.01.T01:CDS | 40.0% |
| ! | GTGTGATTGTTTGTTGCAGT+TGG | + | Chr7:76512047-76512066 | MsG0780040365.01.T01:intron | 40.0% |
| ! | GTTTCAGGTGTGTCATTCAT+TGG | + | Chr7:76511017-76511036 | MsG0780040365.01.T01:CDS | 40.0% |
| ! | TCAGACTTCTTGGTTAGTTG+TGG | + | Chr7:76511406-76511425 | MsG0780040365.01.T01:intron | 40.0% |
| !! | AGCTCAACTTAGCTTGTCAA+AGG | + | Chr7:76513242-76513261 | MsG0780040365.01.T01:three_prime_UTR | 40.0% |
| ACTGCTTCTGCTATGTTCAG+GGG | + | Chr7:76512335-76512354 | MsG0780040365.01.T01:CDS | 45.0% | |
| ATGCGCGGTTTAACGTTGTT+CGG | - | Chr7:76513130-76513149 | None:intergenic | 45.0% | |
| ATGTTCAAGGAGGACAATGC+GGG | + | Chr7:76510550-76510569 | MsG0780040365.01.T01:CDS | 45.0% | |
| CAATTTGGACAACAGAGCGA+AGG | + | Chr7:76512895-76512914 | MsG0780040365.01.T01:three_prime_UTR | 45.0% | |
| CACTGCTTCTGCTATGTTCA+GGG | + | Chr7:76512334-76512353 | MsG0780040365.01.T01:CDS | 45.0% | |
| CATGTTCAAGGAGGACAATG+CGG | + | Chr7:76510549-76510568 | MsG0780040365.01.T01:CDS | 45.0% | |
| CATTTGCTCATCCACCTCTT+TGG | - | Chr7:76512372-76512391 | None:intergenic | 45.0% | |
| CGAAGACGAAGTTATCAGGA+CGG | - | Chr7:76510791-76510810 | None:intergenic | 45.0% | |
| CGTCCTGATAACTTCGTCTT+CGG | + | Chr7:76510789-76510808 | MsG0780040365.01.T01:CDS | 45.0% | |
| CTTCGCTCTGTTGTCCAAAT+TGG | - | Chr7:76512897-76512916 | None:intergenic | 45.0% | |
| CTTTGAATCCCACATCTGCT+GGG | - | Chr7:76512273-76512292 | None:intergenic | 45.0% | |
| GTATCAGAAACCTTCGGTGA+AGG | - | Chr7:76511135-76511154 | None:intergenic | 45.0% | |
| GTCAACTCAACTCTGATCTC+CGG | + | Chr7:76512132-76512151 | MsG0780040365.01.T01:CDS | 45.0% | |
| TAAGATGAGCACCAAAGAGG+TGG | + | Chr7:76512358-76512377 | MsG0780040365.01.T01:CDS | 45.0% | |
| TCACTGCTTCTGCTATGTTC+AGG | + | Chr7:76512333-76512352 | MsG0780040365.01.T01:CDS | 45.0% | |
| TCATGGTTGCTGAGATCAAG+TGG | - | Chr7:76512082-76512101 | None:intergenic | 45.0% | |
| TCATTCATTGGGAGGAGGAA+CGG | + | Chr7:76511029-76511048 | MsG0780040365.01.T01:CDS | 45.0% | |
| TCCTTTCGCCCAATTGTTAC+CGG | - | Chr7:76510826-76510845 | None:intergenic | 45.0% | |
| TCTTTGAATCCCACATCTGC+TGG | - | Chr7:76512274-76512293 | None:intergenic | 45.0% | |
| TGAACATAGCAGAAGCAGTG+AGG | - | Chr7:76512334-76512353 | None:intergenic | 45.0% | |
| TGACCGAAGACGAAGTTATC+AGG | - | Chr7:76510795-76510814 | None:intergenic | 45.0% | |
| TGAGATTCACAGCCAGTTTC+CGG | - | Chr7:76512154-76512173 | None:intergenic | 45.0% | |
| TGAGTTTCCGACGTATCTTC+CGG | - | Chr7:76510634-76510653 | None:intergenic | 45.0% | |
| TGGCAAACAGCATCAACTAC+AGG | - | Chr7:76512009-76512028 | None:intergenic | 45.0% | |
| TGGGATCCACTCAACAAAGT+AGG | - | Chr7:76512420-76512439 | None:intergenic | 45.0% | |
| TTCTCCTTCTTCATCAGCAG+TGG | - | Chr7:76512687-76512706 | None:intergenic | 45.0% | |
| TTGATCTCAGCAACCATGAG+TGG | + | Chr7:76512083-76512102 | MsG0780040365.01.T01:CDS | 45.0% | |
| ! | CCCAGAATTTTGAACCGATC+TGG | - | Chr7:76510578-76510597 | None:intergenic | 45.0% |
| ! | GCTTTCTTGCATTGGTACAC+TGG | + | Chr7:76512578-76512597 | MsG0780040365.01.T01:CDS | 45.0% |
| ! | TGAGGGATTTAGTATCGAGC+TGG | + | Chr7:76512851-76512870 | MsG0780040365.01.T01:three_prime_UTR | 45.0% |
| ! | TTGCATTGGTACACTGGTGA+AGG | + | Chr7:76512584-76512603 | MsG0780040365.01.T01:CDS | 45.0% |
| !! | AGATCAGAGTTGAGTTGACC+AGG | - | Chr7:76512131-76512150 | None:intergenic | 45.0% |
| !! | GATCAGAGTTGAGTTGACCA+GGG | - | Chr7:76512130-76512149 | None:intergenic | 45.0% |
| !! | GTTCTGGAACAGTCAATGCA+CGG | - | Chr7:76512247-76512266 | None:intergenic | 45.0% |
| AACTTCGTCTTCGGTCAGTC+CGG | + | Chr7:76510798-76510817 | MsG0780040365.01.T01:CDS | 50.0% | |
| ACAATGGACAGTGTTCGCAC+TGG | + | Chr7:76510747-76510766 | MsG0780040365.01.T01:CDS | 50.0% | |
| ACAGCAAGTCACTCCACTCA+TGG | - | Chr7:76512099-76512118 | None:intergenic | 50.0% | |
| ACCAATAAAGGTGGAGGCCA+TGG | - | Chr7:76512489-76512508 | None:intergenic | 50.0% | |
| AGAACTCACCCAGCAGATGT+GGG | + | Chr7:76512262-76512281 | MsG0780040365.01.T01:CDS | 50.0% | |
| AGGAGAATATGAGGACGACG+AGG | + | Chr7:76512700-76512719 | MsG0780040365.01.T01:CDS | 50.0% | |
| ATATGAGGACGACGAGGAAG+AGG | + | Chr7:76512706-76512725 | MsG0780040365.01.T01:CDS | 50.0% | |
| CAACTCTGATCTCCGGAAAC+TGG | + | Chr7:76512139-76512158 | MsG0780040365.01.T01:CDS | 50.0% | |
| CATTCATTGGGAGGAGGAAC+GGG | + | Chr7:76511030-76511049 | MsG0780040365.01.T01:CDS | 50.0% | |
| CGAACACTGTCCATTGTACC+AGG | - | Chr7:76510744-76510763 | None:intergenic | 50.0% | |
| CGTCTGCACTTCTTCATGGT+CGG | + | Chr7:76512185-76512204 | MsG0780040365.01.T01:CDS | 50.0% | |
| GATCCAACCGGAAGATACGT+CGG | + | Chr7:76510624-76510643 | MsG0780040365.01.T01:CDS | 50.0% | |
| GATGCCACTGCTGATGAAGA+AGG | + | Chr7:76512680-76512699 | MsG0780040365.01.T01:CDS | 50.0% | |
| GGAGGAAGGCTTTCTTGCAT+TGG | + | Chr7:76512570-76512589 | MsG0780040365.01.T01:CDS | 50.0% | |
| GGGTAAGATGAGCACCAAAG+AGG | + | Chr7:76512355-76512374 | MsG0780040365.01.T01:CDS | 50.0% | |
| GTTTGTGACATTGCTCCTCG+AGG | + | Chr7:76512458-76512477 | MsG0780040365.01.T01:CDS | 50.0% | |
| TACTACAACGAAGCCTCCTG+TGG | + | Chr7:76510681-76510700 | MsG0780040365.01.T01:CDS | 50.0% | |
| TCCATGGCCTCCACCTTTAT+TGG | + | Chr7:76512485-76512504 | MsG0780040365.01.T01:CDS | 50.0% | |
| TGGAACAAACCTTCCACAGG+AGG | - | Chr7:76510697-76510716 | None:intergenic | 50.0% | |
| TTGGTACACTGGTGAAGGCA+TGG | + | Chr7:76512589-76512608 | MsG0780040365.01.T01:CDS | 50.0% | |
| TTTCCGACGTATCTTCCGGT+TGG | - | Chr7:76510630-76510649 | None:intergenic | 50.0% | |
| ! | AAGAAGTGCAGACGAGGGAA+TGG | - | Chr7:76512179-76512198 | None:intergenic | 50.0% |
| ! | ACCATGAAGAAGTGCAGACG+AGG | - | Chr7:76512185-76512204 | None:intergenic | 50.0% |
| ! | AGAAGTGCAGACGAGGGAAT+GGG | - | Chr7:76512178-76512197 | None:intergenic | 50.0% |
| ! | AGTGTTCGCACTGGTCCTTA+CGG | + | Chr7:76510756-76510775 | MsG0780040365.01.T01:CDS | 50.0% |
| ! | CAGGTGTGTCATTCATTGGG+AGG | + | Chr7:76511021-76511040 | MsG0780040365.01.T01:CDS | 50.0% |
| ! | CCATGAAGAAGTGCAGACGA+GGG | - | Chr7:76512184-76512203 | None:intergenic | 50.0% |
| ! | GAAGTAGTTTGCGACGAGCA+CGG | + | Chr7:76510597-76510616 | MsG0780040365.01.T01:CDS | 50.0% |
| ! | GTGTGTCATTCATTGGGAGG+AGG | + | Chr7:76511024-76511043 | MsG0780040365.01.T01:CDS | 50.0% |
| ! | TGATGTGTGCTGCTGATCCT+AGG | + | Chr7:76512297-76512316 | MsG0780040365.01.T01:CDS | 50.0% |
| ! | TGGTGAAGGCATGGATGAGA+TGG | + | Chr7:76512598-76512617 | MsG0780040365.01.T01:CDS | 50.0% |
| !! | ACTTGCTGTCTTCGTTTCCC+TGG | + | Chr7:76512110-76512129 | MsG0780040365.01.T01:CDS | 50.0% |
| !! | TTCGGTGTTTCCTTCACCGA+AGG | + | Chr7:76511122-76511141 | MsG0780040365.01.T01:CDS | 50.0% |
| ACAACGAAGCCTCCTGTGGA+AGG | + | Chr7:76510685-76510704 | MsG0780040365.01.T01:CDS | 55.0% | |
| ACGGTATTGCTGAGAGCCAC+GGG | - | Chr7:76512228-76512247 | None:intergenic | 55.0% | |
| ACTGCTGGTACTCAGACACG+AGG | - | Chr7:76512655-76512674 | None:intergenic | 55.0% | |
| AGGAGGAACGGGATCTGGAA+TGG | + | Chr7:76511041-76511060 | MsG0780040365.01.T01:CDS | 55.0% | |
| AGGCTCCAAGTCCATGAGGA+TGG | - | Chr7:76510724-76510743 | None:intergenic | 55.0% | |
| ATCCTCATGGACTTGGAGCC+TGG | + | Chr7:76510723-76510742 | MsG0780040365.01.T01:CDS | 55.0% | |
| CACATCTGCTGGGTGAGTTC+TGG | - | Chr7:76512263-76512282 | None:intergenic | 55.0% | |
| CACGGTATTGCTGAGAGCCA+CGG | - | Chr7:76512229-76512248 | None:intergenic | 55.0% | |
| CAGAACTCACCCAGCAGATG+TGG | + | Chr7:76512261-76512280 | MsG0780040365.01.T01:CDS | 55.0% | |
| CCCTCGTCTGCACTTCTTCA+TGG | + | Chr7:76512181-76512200 | MsG0780040365.01.T01:CDS | 55.0% | |
| CGAGCTGGATGTGGAGAGAA+TGG | + | Chr7:76512866-76512885 | MsG0780040365.01.T01:three_prime_UTR | 55.0% | |
| CTTCATCAGCAGTGGCATCC+TGG | - | Chr7:76512679-76512698 | None:intergenic | 55.0% | |
| GAGCACGGCATAGATCCAAC+CGG | + | Chr7:76510612-76510631 | MsG0780040365.01.T01:CDS | 55.0% | |
| GCCGGTAACAATTGGGCGAA+AGG | + | Chr7:76510822-76510841 | MsG0780040365.01.T01:CDS | 55.0% | |
| GCGTGGAACAAACCTTCCAC+AGG | - | Chr7:76510700-76510719 | None:intergenic | 55.0% | |
| GGACAATGCGGGAACCAGAT+CGG | + | Chr7:76510561-76510580 | MsG0780040365.01.T01:CDS | 55.0% | |
| GGACGGAAGATCTGACCGTA+AGG | - | Chr7:76510774-76510793 | None:intergenic | 55.0% | |
| GGACTTGGAGCCTGGTACAA+TGG | + | Chr7:76510731-76510750 | MsG0780040365.01.T01:CDS | 55.0% | |
| GTCTGAGTACCAGCAGTACC+AGG | + | Chr7:76512658-76512677 | MsG0780040365.01.T01:CDS | 55.0% | |
| TACCAGGCTCCAAGTCCATG+AGG | - | Chr7:76510728-76510747 | None:intergenic | 55.0% | |
| TTTGCTCCTCTCACATCCCG+TGG | + | Chr7:76512209-76512228 | MsG0780040365.01.T01:CDS | 55.0% | |
| ! | GGAGGAACGGGATCTGGAAT+GGG | + | Chr7:76511042-76511061 | MsG0780040365.01.T01:CDS | 55.0% |
| ! | TGTGCTGCTGATCCTAGGCA+TGG | + | Chr7:76512302-76512321 | MsG0780040365.01.T01:CDS | 55.0% |
| !! | AGTCCGGTGCCGGTAACAAT+TGG | + | Chr7:76510814-76510833 | MsG0780040365.01.T01:CDS | 55.0% |
| !! | GTCCGGTGCCGGTAACAATT+GGG | + | Chr7:76510815-76510834 | MsG0780040365.01.T01:CDS | 55.0% |
| AAGTCCATGAGGATGGCGCG+TGG | - | Chr7:76510717-76510736 | None:intergenic | 60.0% | |
| ACGCGCCATCCTCATGGACT+TGG | + | Chr7:76510716-76510735 | MsG0780040365.01.T01:CDS | 60.0% | |
| CAGTGGCATCCTGGTACTGC+TGG | - | Chr7:76512670-76512689 | None:intergenic | 60.0% | |
| CGCCCAATTGTTACCGGCAC+CGG | - | Chr7:76510820-76510839 | None:intergenic | 60.0% | |
| GTGAGGTAGCGACCATGCCT+AGG | - | Chr7:76512317-76512336 | None:intergenic | 60.0% | |
| TGAGAGCCACGGGATGTGAG+AGG | - | Chr7:76512218-76512237 | None:intergenic | 60.0% | |
| TGCTCCTCGAGGTCTCTCCA+TGG | + | Chr7:76512469-76512488 | MsG0780040365.01.T01:CDS | 60.0% | |
| TGTTCCACGCGCCATCCTCA+TGG | + | Chr7:76510710-76510729 | MsG0780040365.01.T01:CDS | 60.0% | |
| TTGGGAGGAGGAACGGGATC+TGG | + | Chr7:76511036-76511055 | MsG0780040365.01.T01:CDS | 60.0% | |
| GAGGCCATGGAGAGACCTCG+AGG | - | Chr7:76512476-76512495 | None:intergenic | 65.0% | |
| GTCTTCGGTCAGTCCGGTGC+CGG | + | Chr7:76510804-76510823 | MsG0780040365.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 76510396 | 76513314 | 76510396 | ID=MsG0780040365.01;Name=MsG0780040365.01 |
| Chr7 | mRNA | 76510396 | 76513314 | 76510396 | ID=MsG0780040365.01.T01;Parent=MsG0780040365.01;Name=MsG0780040365.01.T01;_AED=0.17;_eAED=0.17;_QI=0|1|0.66|1|1|1|3|563|495 |
| Chr7 | exon | 76510396 | 76510927 | 76510396 | ID=MsG0780040365.01.T01:exon:14614;Parent=MsG0780040365.01.T01 |
| Chr7 | exon | 76511016 | 76511285 | 76511016 | ID=MsG0780040365.01.T01:exon:14615;Parent=MsG0780040365.01.T01 |
| Chr7 | exon | 76512066 | 76513314 | 76512066 | ID=MsG0780040365.01.T01:exon:14616;Parent=MsG0780040365.01.T01 |
| Chr7 | CDS | 76510396 | 76510927 | 76510396 | ID=MsG0780040365.01.T01:cds;Parent=MsG0780040365.01.T01 |
| Chr7 | CDS | 76511016 | 76511285 | 76511016 | ID=MsG0780040365.01.T01:cds;Parent=MsG0780040365.01.T01 |
| Chr7 | CDS | 76512066 | 76512751 | 76512066 | ID=MsG0780040365.01.T01:cds;Parent=MsG0780040365.01.T01 |
| Chr7 | three_prime_UTR | 76512752 | 76513314 | 76512752 | ID=MsG0780040365.01.T01:three_prime_utr;Parent=MsG0780040365.01.T01 |
| Gene Sequence |
| Protein sequence |
