Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021233.01.T01 | XP_039689330.1 | 99.042 | 522 | 5 | 0 | 1 | 522 | 1 | 522 | 0 | 1048 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021233.01.T01 | Q8VZ80 | 72.565 | 503 | 135 | 3 | 20 | 519 | 26 | 528 | 0 | 755 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021233.01.T01 | A0A072UM27 | 99.042 | 522 | 5 | 0 | 1 | 522 | 1 | 522 | 0.0 | 1048 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0480021233.01 | MsG0680034393.01 | 0.802943 | 4.413613e-49 | 2.189904e-46 |
MsG0480021233.01 | MsG0780036754.01 | 0.826269 | 2.975793e-54 | 2.777417e-51 |
MsG0480021233.01 | MsG0780041460.01 | 0.835680 | 1.457447e-56 | 1.795242e-53 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021233.01.T01 | MTR_4g069500 | 99.042 | 522 | 5 | 0 | 1 | 522 | 1 | 522 | 0.0 | 1048 |
MsG0480021233.01.T01 | MTR_4g069500 | 98.941 | 472 | 5 | 0 | 51 | 522 | 1 | 472 | 0.0 | 943 |
MsG0480021233.01.T01 | MTR_3g116240 | 81.967 | 488 | 86 | 1 | 13 | 498 | 11 | 498 | 0.0 | 826 |
MsG0480021233.01.T01 | MTR_4g072030 | 75.096 | 522 | 123 | 3 | 1 | 522 | 1 | 515 | 0.0 | 790 |
MsG0480021233.01.T01 | MTR_4g069500 | 99.399 | 333 | 2 | 0 | 190 | 522 | 1 | 333 | 0.0 | 670 |
MsG0480021233.01.T01 | MTR_8g077890 | 59.877 | 486 | 191 | 3 | 27 | 510 | 16 | 499 | 0.0 | 583 |
MsG0480021233.01.T01 | MTR_5g075300 | 56.584 | 486 | 206 | 3 | 25 | 508 | 14 | 496 | 0.0 | 573 |
MsG0480021233.01.T01 | MTR_6g088450 | 53.196 | 485 | 215 | 2 | 2 | 483 | 27 | 502 | 0.0 | 526 |
MsG0480021233.01.T01 | MTR_2g013310 | 52.024 | 494 | 216 | 5 | 22 | 515 | 45 | 517 | 2.14e-176 | 507 |
MsG0480021233.01.T01 | MTR_8g103500 | 52.258 | 465 | 214 | 2 | 27 | 491 | 15 | 471 | 2.28e-166 | 481 |
MsG0480021233.01.T01 | MTR_7g446340 | 47.732 | 507 | 244 | 6 | 12 | 517 | 41 | 527 | 2.79e-163 | 474 |
MsG0480021233.01.T01 | MTR_6g007340 | 47.732 | 507 | 244 | 6 | 12 | 517 | 41 | 527 | 2.79e-163 | 474 |
MsG0480021233.01.T01 | MTR_2g013310 | 51.613 | 465 | 204 | 5 | 51 | 515 | 1 | 444 | 6.72e-163 | 470 |
MsG0480021233.01.T01 | MTR_5g019870 | 47.590 | 498 | 241 | 5 | 27 | 519 | 12 | 494 | 3.99e-158 | 459 |
MsG0480021233.01.T01 | MTR_3g084110 | 30.847 | 496 | 313 | 9 | 20 | 508 | 16 | 488 | 3.26e-72 | 238 |
MsG0480021233.01.T01 | MTR_1g116660 | 31.837 | 490 | 300 | 11 | 17 | 497 | 20 | 484 | 7.67e-71 | 235 |
MsG0480021233.01.T01 | MTR_7g005910 | 30.357 | 504 | 319 | 10 | 17 | 510 | 18 | 499 | 2.67e-70 | 233 |
MsG0480021233.01.T01 | MTR_1g116650 | 30.181 | 497 | 301 | 8 | 17 | 502 | 63 | 524 | 1.52e-68 | 229 |
MsG0480021233.01.T01 | MTR_4g077740 | 31.818 | 506 | 299 | 15 | 9 | 489 | 14 | 498 | 2.94e-68 | 228 |
MsG0480021233.01.T01 | MTR_3g074410 | 29.400 | 500 | 304 | 11 | 34 | 507 | 29 | 505 | 1.85e-60 | 207 |
MsG0480021233.01.T01 | MTR_7g082270 | 31.546 | 485 | 295 | 12 | 11 | 488 | 45 | 499 | 2.12e-60 | 207 |
MsG0480021233.01.T01 | MTR_5g006070 | 29.134 | 508 | 309 | 11 | 32 | 513 | 25 | 507 | 1.98e-58 | 202 |
MsG0480021233.01.T01 | MTR_0009s0370 | 28.952 | 525 | 321 | 13 | 20 | 515 | 10 | 511 | 4.43e-58 | 201 |
MsG0480021233.01.T01 | MTR_6g018790 | 31.533 | 463 | 273 | 11 | 36 | 488 | 111 | 539 | 1.05e-57 | 201 |
MsG0480021233.01.T01 | MTR_5g006070 | 29.825 | 456 | 291 | 8 | 63 | 513 | 28 | 459 | 2.80e-57 | 198 |
MsG0480021233.01.T01 | MTR_3g023480 | 29.868 | 529 | 321 | 11 | 11 | 508 | 2 | 511 | 3.06e-57 | 199 |
MsG0480021233.01.T01 | MTR_5g020270 | 28.542 | 487 | 312 | 10 | 12 | 491 | 31 | 488 | 5.11e-56 | 195 |
MsG0480021233.01.T01 | MTR_5g077580 | 28.036 | 560 | 272 | 12 | 26 | 488 | 22 | 547 | 1.77e-54 | 193 |
MsG0480021233.01.T01 | MTR_7g094450 | 28.660 | 485 | 306 | 9 | 12 | 490 | 22 | 472 | 2.22e-54 | 190 |
MsG0480021233.01.T01 | MTR_5g041550 | 27.843 | 510 | 319 | 10 | 28 | 510 | 22 | 509 | 2.48e-54 | 191 |
MsG0480021233.01.T01 | MTR_1g038600 | 29.191 | 507 | 321 | 9 | 1 | 499 | 1 | 477 | 8.97e-54 | 189 |
MsG0480021233.01.T01 | MTR_3g074390 | 28.340 | 494 | 313 | 8 | 34 | 505 | 32 | 506 | 1.02e-53 | 189 |
MsG0480021233.01.T01 | MTR_1g104750 | 28.630 | 489 | 302 | 12 | 32 | 497 | 26 | 490 | 1.54e-53 | 189 |
MsG0480021233.01.T01 | MTR_3g008160 | 26.415 | 530 | 341 | 11 | 6 | 513 | 3 | 505 | 2.15e-53 | 188 |
MsG0480021233.01.T01 | MTR_0204s0020 | 28.454 | 485 | 306 | 9 | 31 | 495 | 23 | 486 | 3.49e-53 | 187 |
MsG0480021233.01.T01 | MTR_4g090600 | 28.630 | 489 | 298 | 11 | 34 | 496 | 27 | 490 | 6.28e-53 | 187 |
MsG0480021233.01.T01 | MTR_4g118610 | 28.689 | 488 | 311 | 9 | 10 | 491 | 30 | 486 | 6.74e-53 | 187 |
MsG0480021233.01.T01 | MTR_8g077310 | 27.273 | 462 | 307 | 8 | 33 | 491 | 50 | 485 | 6.96e-53 | 187 |
MsG0480021233.01.T01 | MTR_1g104780 | 28.090 | 534 | 324 | 11 | 19 | 521 | 11 | 515 | 7.68e-53 | 187 |
MsG0480021233.01.T01 | MTR_1g104770 | 27.088 | 491 | 311 | 9 | 34 | 497 | 27 | 497 | 9.12e-53 | 187 |
MsG0480021233.01.T01 | MTR_7g082270 | 32.701 | 422 | 247 | 12 | 11 | 425 | 45 | 436 | 1.08e-52 | 186 |
MsG0480021233.01.T01 | MTR_0204s0020 | 28.423 | 482 | 307 | 9 | 31 | 495 | 23 | 483 | 1.86e-52 | 186 |
MsG0480021233.01.T01 | MTR_5g020270 | 30.476 | 420 | 251 | 10 | 81 | 491 | 1 | 388 | 3.16e-52 | 182 |
MsG0480021233.01.T01 | MTR_1g022315 | 28.817 | 465 | 299 | 7 | 32 | 491 | 51 | 488 | 6.13e-52 | 184 |
MsG0480021233.01.T01 | MTR_3g008170 | 27.096 | 513 | 333 | 10 | 21 | 510 | 13 | 507 | 7.91e-52 | 184 |
MsG0480021233.01.T01 | MTR_1g038630 | 27.599 | 529 | 327 | 10 | 1 | 503 | 1 | 499 | 9.88e-52 | 184 |
MsG0480021233.01.T01 | MTR_2g049020 | 32.500 | 360 | 223 | 6 | 26 | 382 | 22 | 364 | 1.12e-51 | 185 |
MsG0480021233.01.T01 | MTR_7g113970 | 29.103 | 457 | 296 | 7 | 35 | 491 | 67 | 495 | 1.49e-51 | 183 |
MsG0480021233.01.T01 | MTR_3g008160 | 28.082 | 438 | 290 | 7 | 78 | 513 | 42 | 456 | 2.57e-51 | 182 |
MsG0480021233.01.T01 | MTR_4g091370 | 27.607 | 489 | 303 | 9 | 34 | 496 | 27 | 490 | 3.40e-51 | 183 |
MsG0480021233.01.T01 | MTR_8g077300 | 27.291 | 502 | 310 | 10 | 16 | 491 | 5 | 477 | 3.49e-51 | 182 |
MsG0480021233.01.T01 | MTR_5g082540 | 29.038 | 520 | 316 | 12 | 21 | 512 | 14 | 508 | 5.08e-51 | 182 |
MsG0480021233.01.T01 | MTR_2g020710 | 29.694 | 458 | 279 | 9 | 41 | 490 | 60 | 482 | 7.81e-51 | 181 |
MsG0480021233.01.T01 | MTR_0204s0040 | 28.024 | 496 | 315 | 10 | 21 | 495 | 20 | 494 | 1.03e-50 | 181 |
MsG0480021233.01.T01 | MTR_3g093010 | 27.345 | 501 | 316 | 10 | 31 | 506 | 23 | 500 | 1.09e-50 | 181 |
MsG0480021233.01.T01 | MTR_3g093060 | 29.298 | 413 | 269 | 6 | 80 | 488 | 46 | 439 | 1.65e-50 | 179 |
MsG0480021233.01.T01 | MTR_2g026160 | 31.856 | 361 | 233 | 4 | 22 | 379 | 19 | 369 | 6.98e-50 | 181 |
MsG0480021233.01.T01 | MTR_2g026160 | 37.374 | 99 | 62 | 0 | 398 | 496 | 463 | 561 | 1.87e-14 | 76.6 |
MsG0480021233.01.T01 | MTR_4g116770 | 28.024 | 496 | 315 | 10 | 21 | 495 | 216 | 690 | 9.74e-50 | 182 |
MsG0480021233.01.T01 | MTR_8g102860 | 26.901 | 513 | 324 | 13 | 29 | 512 | 26 | 516 | 1.21e-49 | 179 |
MsG0480021233.01.T01 | MTR_7g094110 | 28.601 | 479 | 314 | 7 | 12 | 490 | 24 | 474 | 2.32e-49 | 177 |
MsG0480021233.01.T01 | MTR_2g020710 | 30.189 | 424 | 253 | 9 | 75 | 490 | 5 | 393 | 4.69e-49 | 174 |
MsG0480021233.01.T01 | MTR_8g102860 | 29.040 | 427 | 273 | 10 | 95 | 512 | 59 | 464 | 1.03e-48 | 175 |
MsG0480021233.01.T01 | MTR_4g116790 | 27.639 | 521 | 331 | 11 | 21 | 520 | 18 | 513 | 1.23e-48 | 176 |
MsG0480021233.01.T01 | MTR_3g007910 | 27.088 | 491 | 304 | 11 | 31 | 507 | 23 | 473 | 1.38e-48 | 175 |
MsG0480021233.01.T01 | MTR_5g094760 | 27.218 | 496 | 315 | 10 | 23 | 495 | 20 | 492 | 1.85e-48 | 175 |
MsG0480021233.01.T01 | MTR_6g087040 | 24.748 | 497 | 333 | 9 | 31 | 506 | 28 | 504 | 2.86e-48 | 174 |
MsG0480021233.01.T01 | MTR_6g088375 | 24.748 | 497 | 333 | 9 | 31 | 506 | 28 | 504 | 2.86e-48 | 174 |
MsG0480021233.01.T01 | MTR_7g091690 | 28.112 | 498 | 308 | 12 | 23 | 497 | 20 | 490 | 7.08e-48 | 173 |
MsG0480021233.01.T01 | MTR_8g077310 | 27.578 | 417 | 267 | 9 | 81 | 491 | 1 | 388 | 1.48e-47 | 170 |
MsG0480021233.01.T01 | MTR_1g022315 | 29.567 | 416 | 261 | 7 | 81 | 491 | 1 | 389 | 1.72e-47 | 170 |
MsG0480021233.01.T01 | MTR_5g020270 | 27.010 | 485 | 301 | 10 | 12 | 491 | 31 | 467 | 5.16e-47 | 170 |
MsG0480021233.01.T01 | MTR_7g113960 | 28.238 | 471 | 300 | 9 | 41 | 507 | 38 | 474 | 2.51e-46 | 169 |
MsG0480021233.01.T01 | MTR_2g048720 | 32.869 | 359 | 208 | 8 | 26 | 374 | 22 | 357 | 2.94e-46 | 170 |
MsG0480021233.01.T01 | MTR_3g074270 | 27.160 | 486 | 288 | 12 | 34 | 495 | 27 | 470 | 1.79e-44 | 164 |
MsG0480021233.01.T01 | MTR_3g080240 | 28.151 | 476 | 289 | 13 | 30 | 490 | 93 | 530 | 1.20e-43 | 162 |
MsG0480021233.01.T01 | MTR_2g026140 | 30.978 | 368 | 219 | 7 | 36 | 398 | 30 | 367 | 6.08e-41 | 155 |
MsG0480021233.01.T01 | MTR_2g026140 | 36.364 | 99 | 63 | 0 | 398 | 496 | 448 | 546 | 6.64e-11 | 65.1 |
MsG0480021233.01.T01 | MTR_4g064820 | 30.874 | 366 | 221 | 13 | 26 | 371 | 88 | 441 | 1.54e-40 | 153 |
MsG0480021233.01.T01 | MTR_3g074370 | 30.973 | 339 | 207 | 7 | 176 | 508 | 21 | 338 | 4.22e-40 | 148 |
MsG0480021233.01.T01 | MTR_3g074320 | 29.970 | 337 | 213 | 6 | 176 | 508 | 21 | 338 | 3.59e-39 | 145 |
MsG0480021233.01.T01 | MTR_2g020710 | 29.351 | 385 | 230 | 8 | 41 | 417 | 60 | 410 | 4.11e-39 | 147 |
MsG0480021233.01.T01 | MTR_3g074340 | 30.383 | 339 | 209 | 7 | 176 | 508 | 21 | 338 | 4.22e-39 | 145 |
MsG0480021233.01.T01 | MTR_4g118610 | 28.019 | 414 | 262 | 8 | 10 | 417 | 30 | 413 | 5.87e-39 | 147 |
MsG0480021233.01.T01 | MTR_6g087910 | 27.143 | 490 | 320 | 10 | 7 | 488 | 23 | 483 | 6.07e-39 | 148 |
MsG0480021233.01.T01 | MTR_2g020710 | 29.427 | 384 | 229 | 8 | 41 | 416 | 60 | 409 | 8.78e-39 | 147 |
MsG0480021233.01.T01 | MTR_7g094110 | 26.722 | 479 | 303 | 7 | 12 | 490 | 24 | 454 | 9.32e-39 | 147 |
MsG0480021233.01.T01 | MTR_3g074380 | 27.606 | 355 | 220 | 6 | 34 | 369 | 30 | 366 | 3.76e-38 | 144 |
MsG0480021233.01.T01 | MTR_8g077310 | 27.193 | 342 | 224 | 5 | 33 | 374 | 50 | 366 | 3.70e-37 | 142 |
MsG0480021233.01.T01 | MTR_4g013205 | 26.749 | 486 | 323 | 9 | 6 | 488 | 14 | 469 | 3.55e-36 | 140 |
MsG0480021233.01.T01 | MTR_7g113970 | 27.035 | 344 | 225 | 5 | 35 | 378 | 67 | 384 | 1.25e-32 | 129 |
MsG0480021233.01.T01 | MTR_3g116060 | 34.043 | 235 | 144 | 5 | 28 | 257 | 2 | 230 | 1.43e-32 | 132 |
MsG0480021233.01.T01 | MTR_3g116060 | 29.167 | 240 | 154 | 6 | 272 | 502 | 496 | 728 | 1.23e-21 | 99.4 |
MsG0480021233.01.T01 | MTR_2g020710 | 27.778 | 342 | 206 | 7 | 41 | 374 | 60 | 368 | 1.17e-29 | 120 |
MsG0480021233.01.T01 | MTR_4g116790 | 25.210 | 357 | 229 | 6 | 21 | 358 | 18 | 355 | 3.55e-29 | 119 |
MsG0480021233.01.T01 | MTR_3g118530 | 36.098 | 205 | 121 | 5 | 41 | 239 | 15 | 215 | 1.05e-28 | 120 |
MsG0480021233.01.T01 | MTR_3g118530 | 29.730 | 222 | 140 | 6 | 273 | 485 | 507 | 721 | 7.04e-23 | 103 |
MsG0480021233.01.T01 | MTR_3g118530 | 36.098 | 205 | 121 | 5 | 41 | 239 | 15 | 215 | 1.51e-28 | 120 |
MsG0480021233.01.T01 | MTR_7g113960 | 27.485 | 342 | 214 | 7 | 41 | 378 | 38 | 349 | 3.88e-28 | 116 |
MsG0480021233.01.T01 | MTR_5g024740 | 33.005 | 203 | 128 | 4 | 34 | 231 | 8 | 207 | 1.29e-25 | 111 |
MsG0480021233.01.T01 | MTR_5g024740 | 29.249 | 253 | 160 | 6 | 245 | 485 | 458 | 703 | 1.26e-17 | 86.7 |
MsG0480021233.01.T01 | MTR_8g073100 | 31.527 | 203 | 131 | 5 | 34 | 231 | 8 | 207 | 3.06e-24 | 107 |
MsG0480021233.01.T01 | MTR_8g073100 | 27.928 | 222 | 144 | 4 | 273 | 485 | 485 | 699 | 1.68e-18 | 89.4 |
MsG0480021233.01.T01 | MTR_5g044910 | 31.527 | 203 | 131 | 4 | 34 | 231 | 8 | 207 | 6.12e-24 | 106 |
MsG0480021233.01.T01 | MTR_5g044910 | 27.068 | 266 | 171 | 6 | 231 | 485 | 448 | 701 | 4.47e-18 | 88.2 |
MsG0480021233.01.T01 | MTR_3g074400 | 25.000 | 424 | 244 | 12 | 81 | 481 | 44 | 416 | 5.97e-23 | 101 |
MsG0480021233.01.T01 | MTR_1g069935 | 24.453 | 548 | 305 | 22 | 11 | 487 | 2 | 511 | 1.12e-12 | 70.9 |
MsG0480021233.01.T01 | MTR_2g081930 | 24.762 | 420 | 267 | 18 | 80 | 486 | 134 | 517 | 1.38e-12 | 70.5 |
MsG0480021233.01.T01 | MTR_5g096000 | 30.667 | 150 | 103 | 1 | 31 | 179 | 23 | 172 | 1.01e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021233.01.T01 | AT3G18830 | 72.565 | 503 | 135 | 3 | 20 | 519 | 26 | 528 | 0.0 | 755 |
MsG0480021233.01.T01 | AT2G16120 | 67.617 | 491 | 156 | 3 | 23 | 511 | 19 | 508 | 0.0 | 684 |
MsG0480021233.01.T01 | AT2G16130 | 67.360 | 481 | 155 | 2 | 23 | 501 | 19 | 499 | 0.0 | 675 |
MsG0480021233.01.T01 | AT4G36670 | 57.526 | 485 | 205 | 1 | 21 | 504 | 8 | 492 | 0.0 | 576 |
MsG0480021233.01.T01 | AT2G18480 | 58.542 | 480 | 195 | 3 | 13 | 491 | 7 | 483 | 0.0 | 556 |
MsG0480021233.01.T01 | AT2G20780 | 49.004 | 502 | 236 | 6 | 8 | 506 | 34 | 518 | 2.48e-166 | 481 |
MsG0480021233.01.T01 | AT2G20780 | 49.446 | 451 | 209 | 5 | 59 | 506 | 26 | 460 | 4.12e-148 | 433 |
MsG0480021233.01.T01 | AT2G43330 | 31.928 | 498 | 312 | 8 | 6 | 497 | 5 | 481 | 4.02e-69 | 231 |
MsG0480021233.01.T01 | AT5G59250 | 31.590 | 478 | 278 | 11 | 35 | 489 | 103 | 554 | 4.15e-65 | 221 |
MsG0480021233.01.T01 | AT5G17010 | 31.225 | 506 | 294 | 15 | 13 | 489 | 20 | 500 | 9.16e-65 | 219 |
MsG0480021233.01.T01 | AT5G17010 | 31.225 | 506 | 294 | 15 | 13 | 489 | 20 | 500 | 9.16e-65 | 219 |
MsG0480021233.01.T01 | AT5G17010 | 31.225 | 506 | 294 | 15 | 13 | 489 | 20 | 500 | 9.16e-65 | 219 |
MsG0480021233.01.T01 | AT1G50310 | 28.858 | 499 | 309 | 9 | 34 | 509 | 29 | 504 | 2.76e-62 | 213 |
MsG0480021233.01.T01 | AT1G11260 | 28.655 | 513 | 318 | 11 | 31 | 519 | 25 | 513 | 9.15e-62 | 211 |
MsG0480021233.01.T01 | AT3G19940 | 29.249 | 506 | 297 | 11 | 34 | 509 | 29 | 503 | 1.81e-60 | 207 |
MsG0480021233.01.T01 | AT3G05150 | 30.435 | 506 | 303 | 10 | 7 | 500 | 8 | 476 | 3.64e-59 | 203 |
MsG0480021233.01.T01 | AT5G16150 | 32.265 | 499 | 289 | 12 | 5 | 488 | 75 | 539 | 5.81e-59 | 204 |
MsG0480021233.01.T01 | AT5G16150 | 32.265 | 499 | 289 | 12 | 5 | 488 | 75 | 539 | 5.81e-59 | 204 |
MsG0480021233.01.T01 | AT5G16150 | 32.265 | 499 | 289 | 12 | 5 | 488 | 75 | 539 | 5.81e-59 | 204 |
MsG0480021233.01.T01 | AT3G03090 | 31.210 | 471 | 286 | 12 | 35 | 489 | 52 | 500 | 8.19e-59 | 203 |
MsG0480021233.01.T01 | AT5G27360 | 29.124 | 491 | 309 | 12 | 8 | 491 | 10 | 468 | 1.89e-58 | 201 |
MsG0480021233.01.T01 | AT5G27360 | 29.124 | 491 | 309 | 12 | 8 | 491 | 58 | 516 | 4.44e-58 | 201 |
MsG0480021233.01.T01 | AT3G05150 | 30.101 | 495 | 299 | 9 | 7 | 489 | 8 | 467 | 1.31e-57 | 199 |
MsG0480021233.01.T01 | AT3G05150 | 30.101 | 495 | 299 | 9 | 7 | 489 | 8 | 467 | 1.31e-57 | 199 |
MsG0480021233.01.T01 | AT5G23270 | 29.084 | 502 | 285 | 11 | 34 | 499 | 28 | 494 | 4.19e-57 | 199 |
MsG0480021233.01.T01 | AT5G27350 | 28.974 | 497 | 310 | 11 | 1 | 490 | 3 | 463 | 2.22e-56 | 196 |
MsG0480021233.01.T01 | AT1G54730 | 30.283 | 459 | 282 | 10 | 41 | 494 | 43 | 468 | 5.14e-55 | 192 |
MsG0480021233.01.T01 | AT3G05960 | 28.240 | 517 | 324 | 10 | 20 | 509 | 11 | 507 | 9.23e-55 | 192 |
MsG0480021233.01.T01 | AT1G75220 | 28.448 | 464 | 303 | 7 | 31 | 491 | 49 | 486 | 1.63e-54 | 191 |
MsG0480021233.01.T01 | AT5G18840 | 28.252 | 492 | 313 | 8 | 7 | 490 | 18 | 477 | 4.34e-54 | 190 |
MsG0480021233.01.T01 | AT3G19930 | 27.481 | 524 | 332 | 11 | 15 | 515 | 12 | 510 | 4.96e-54 | 190 |
MsG0480021233.01.T01 | AT3G19930 | 27.481 | 524 | 332 | 11 | 15 | 515 | 12 | 510 | 4.96e-54 | 190 |
MsG0480021233.01.T01 | AT5G26340 | 27.755 | 490 | 306 | 11 | 32 | 497 | 26 | 491 | 3.42e-53 | 188 |
MsG0480021233.01.T01 | AT1G34580 | 29.032 | 496 | 304 | 13 | 34 | 502 | 28 | 502 | 3.51e-53 | 188 |
MsG0480021233.01.T01 | AT5G26250 | 27.992 | 518 | 328 | 11 | 14 | 510 | 10 | 503 | 5.86e-53 | 187 |
MsG0480021233.01.T01 | AT1G19450 | 28.017 | 464 | 305 | 7 | 31 | 491 | 50 | 487 | 1.35e-52 | 186 |
MsG0480021233.01.T01 | AT4G21480 | 29.000 | 500 | 308 | 13 | 25 | 499 | 18 | 495 | 2.58e-52 | 186 |
MsG0480021233.01.T01 | AT1G34580 | 30.930 | 430 | 268 | 10 | 81 | 502 | 44 | 452 | 3.09e-52 | 184 |
MsG0480021233.01.T01 | AT3G05165 | 26.908 | 498 | 314 | 10 | 6 | 490 | 2 | 462 | 1.12e-51 | 183 |
MsG0480021233.01.T01 | AT3G05165 | 26.908 | 498 | 314 | 10 | 6 | 490 | 2 | 462 | 1.12e-51 | 183 |
MsG0480021233.01.T01 | AT3G05165 | 26.908 | 498 | 314 | 10 | 6 | 490 | 2 | 462 | 1.12e-51 | 183 |
MsG0480021233.01.T01 | AT1G50310 | 31.267 | 371 | 229 | 7 | 142 | 509 | 14 | 361 | 9.54e-51 | 178 |
MsG0480021233.01.T01 | AT3G05160 | 25.941 | 478 | 314 | 7 | 21 | 490 | 8 | 453 | 2.36e-49 | 176 |
MsG0480021233.01.T01 | AT1G07340 | 28.654 | 520 | 327 | 12 | 9 | 507 | 2 | 498 | 2.62e-49 | 177 |
MsG0480021233.01.T01 | AT5G27360 | 30.990 | 384 | 231 | 10 | 110 | 490 | 11 | 363 | 4.87e-49 | 173 |
MsG0480021233.01.T01 | AT5G27360 | 30.990 | 384 | 231 | 10 | 110 | 490 | 11 | 363 | 4.87e-49 | 173 |
MsG0480021233.01.T01 | AT1G30220 | 31.988 | 347 | 216 | 5 | 26 | 367 | 24 | 355 | 7.48e-49 | 177 |
MsG0480021233.01.T01 | AT1G30220 | 31.356 | 118 | 75 | 1 | 398 | 509 | 463 | 580 | 1.01e-13 | 74.3 |
MsG0480021233.01.T01 | AT2G48020 | 27.216 | 485 | 315 | 10 | 8 | 489 | 10 | 459 | 1.30e-48 | 174 |
MsG0480021233.01.T01 | AT2G48020 | 27.216 | 485 | 315 | 10 | 8 | 489 | 10 | 459 | 1.30e-48 | 174 |
MsG0480021233.01.T01 | AT4G02050 | 27.220 | 518 | 328 | 10 | 21 | 511 | 18 | 513 | 2.82e-48 | 175 |
MsG0480021233.01.T01 | AT4G02050 | 27.220 | 518 | 328 | 10 | 21 | 511 | 18 | 513 | 2.82e-48 | 175 |
MsG0480021233.01.T01 | AT1G08930 | 27.823 | 496 | 311 | 11 | 8 | 489 | 27 | 489 | 3.90e-48 | 174 |
MsG0480021233.01.T01 | AT1G08930 | 27.823 | 496 | 311 | 11 | 8 | 489 | 27 | 489 | 3.90e-48 | 174 |
MsG0480021233.01.T01 | AT1G54730 | 30.244 | 410 | 249 | 9 | 41 | 445 | 43 | 420 | 1.48e-47 | 171 |
MsG0480021233.01.T01 | AT1G05030 | 30.480 | 479 | 274 | 14 | 30 | 490 | 79 | 516 | 2.16e-47 | 172 |
MsG0480021233.01.T01 | AT1G77210 | 27.146 | 501 | 320 | 11 | 29 | 506 | 26 | 504 | 8.44e-47 | 171 |
MsG0480021233.01.T01 | AT1G77210 | 27.146 | 501 | 320 | 11 | 29 | 506 | 26 | 504 | 8.44e-47 | 171 |
MsG0480021233.01.T01 | AT3G05400 | 28.009 | 457 | 289 | 11 | 41 | 491 | 37 | 459 | 3.23e-46 | 168 |
MsG0480021233.01.T01 | AT3G05160 | 26.667 | 435 | 283 | 6 | 60 | 490 | 2 | 404 | 1.06e-45 | 165 |
MsG0480021233.01.T01 | AT3G05160 | 26.667 | 435 | 283 | 6 | 60 | 490 | 2 | 404 | 1.06e-45 | 165 |
MsG0480021233.01.T01 | AT2G35740 | 30.471 | 361 | 236 | 7 | 29 | 385 | 25 | 374 | 1.38e-45 | 169 |
MsG0480021233.01.T01 | AT2G35740 | 33.628 | 113 | 72 | 1 | 398 | 507 | 466 | 578 | 5.74e-14 | 75.1 |
MsG0480021233.01.T01 | AT4G04750 | 27.273 | 440 | 282 | 13 | 58 | 491 | 64 | 471 | 1.47e-45 | 167 |
MsG0480021233.01.T01 | AT4G04750 | 27.273 | 440 | 282 | 13 | 58 | 491 | 64 | 471 | 1.47e-45 | 167 |
MsG0480021233.01.T01 | AT4G04750 | 27.273 | 440 | 282 | 13 | 58 | 491 | 108 | 515 | 2.34e-45 | 167 |
MsG0480021233.01.T01 | AT1G54730 | 28.665 | 457 | 271 | 11 | 41 | 494 | 43 | 447 | 5.24e-45 | 164 |
MsG0480021233.01.T01 | AT5G61520 | 25.686 | 510 | 331 | 10 | 25 | 506 | 19 | 508 | 5.43e-45 | 166 |
MsG0480021233.01.T01 | AT4G16480 | 30.585 | 376 | 241 | 7 | 1 | 371 | 1 | 361 | 3.84e-44 | 164 |
MsG0480021233.01.T01 | AT4G16480 | 35.345 | 116 | 71 | 1 | 398 | 509 | 467 | 582 | 1.05e-15 | 80.5 |
MsG0480021233.01.T01 | AT4G16480 | 30.585 | 376 | 241 | 7 | 1 | 371 | 1 | 361 | 3.84e-44 | 164 |
MsG0480021233.01.T01 | AT4G16480 | 35.345 | 116 | 71 | 1 | 398 | 509 | 467 | 582 | 1.05e-15 | 80.5 |
MsG0480021233.01.T01 | AT4G16480 | 30.585 | 376 | 241 | 7 | 1 | 371 | 1 | 361 | 3.84e-44 | 164 |
MsG0480021233.01.T01 | AT4G16480 | 35.345 | 116 | 71 | 1 | 398 | 509 | 467 | 582 | 1.05e-15 | 80.5 |
MsG0480021233.01.T01 | AT4G04760 | 27.312 | 465 | 297 | 12 | 35 | 491 | 36 | 467 | 1.50e-43 | 161 |
MsG0480021233.01.T01 | AT4G04760 | 27.727 | 440 | 277 | 12 | 60 | 491 | 2 | 408 | 2.66e-43 | 159 |
MsG0480021233.01.T01 | AT5G61520 | 27.040 | 429 | 290 | 7 | 81 | 506 | 52 | 460 | 3.45e-43 | 160 |
MsG0480021233.01.T01 | AT5G27360 | 28.471 | 425 | 266 | 11 | 8 | 425 | 10 | 403 | 3.60e-43 | 159 |
MsG0480021233.01.T01 | AT1G08890 | 26.096 | 479 | 321 | 8 | 21 | 494 | 13 | 463 | 4.89e-43 | 159 |
MsG0480021233.01.T01 | AT3G05400 | 30.380 | 395 | 234 | 12 | 104 | 491 | 79 | 439 | 1.03e-42 | 158 |
MsG0480021233.01.T01 | AT1G79820 | 30.720 | 472 | 286 | 12 | 28 | 491 | 52 | 490 | 1.05e-42 | 159 |
MsG0480021233.01.T01 | AT1G79820 | 30.720 | 472 | 286 | 12 | 28 | 491 | 52 | 490 | 1.05e-42 | 159 |
MsG0480021233.01.T01 | AT3G05155 | 26.049 | 453 | 295 | 8 | 41 | 488 | 38 | 455 | 1.56e-42 | 158 |
MsG0480021233.01.T01 | AT1G08900 | 26.638 | 473 | 316 | 9 | 22 | 494 | 12 | 453 | 6.38e-42 | 156 |
MsG0480021233.01.T01 | AT3G05165 | 26.651 | 439 | 288 | 8 | 6 | 439 | 2 | 411 | 9.31e-42 | 156 |
MsG0480021233.01.T01 | AT3G05165 | 26.651 | 439 | 288 | 8 | 6 | 439 | 2 | 411 | 9.31e-42 | 156 |
MsG0480021233.01.T01 | AT1G67300 | 27.475 | 495 | 321 | 10 | 6 | 490 | 23 | 489 | 2.42e-41 | 155 |
MsG0480021233.01.T01 | AT1G54730 | 29.581 | 382 | 232 | 9 | 41 | 417 | 43 | 392 | 2.46e-41 | 154 |
MsG0480021233.01.T01 | AT1G54730 | 29.581 | 382 | 232 | 9 | 41 | 417 | 43 | 392 | 2.46e-41 | 154 |
MsG0480021233.01.T01 | AT1G05030 | 29.412 | 459 | 265 | 13 | 50 | 490 | 47 | 464 | 3.17e-41 | 154 |
MsG0480021233.01.T01 | AT3G05165 | 26.651 | 439 | 288 | 8 | 6 | 439 | 2 | 411 | 3.41e-41 | 155 |
MsG0480021233.01.T01 | AT1G08900 | 26.569 | 478 | 318 | 9 | 22 | 494 | 12 | 461 | 4.00e-41 | 154 |
MsG0480021233.01.T01 | AT1G08900 | 26.569 | 478 | 318 | 9 | 22 | 494 | 12 | 461 | 4.00e-41 | 154 |
MsG0480021233.01.T01 | AT1G08900 | 27.231 | 437 | 290 | 8 | 58 | 494 | 11 | 419 | 9.16e-41 | 152 |
MsG0480021233.01.T01 | AT1G67300 | 26.721 | 494 | 325 | 10 | 6 | 490 | 23 | 488 | 9.82e-40 | 151 |
MsG0480021233.01.T01 | AT1G67300 | 26.721 | 494 | 325 | 10 | 6 | 490 | 23 | 488 | 9.82e-40 | 151 |
MsG0480021233.01.T01 | AT5G17010 | 27.059 | 510 | 262 | 16 | 7 | 489 | 11 | 437 | 6.32e-39 | 147 |
MsG0480021233.01.T01 | AT1G67300 | 26.984 | 441 | 285 | 10 | 6 | 437 | 23 | 435 | 2.66e-38 | 146 |
MsG0480021233.01.T01 | AT1G67300 | 26.984 | 441 | 285 | 10 | 6 | 437 | 23 | 435 | 2.66e-38 | 146 |
MsG0480021233.01.T01 | AT1G54730 | 28.431 | 408 | 238 | 10 | 41 | 445 | 43 | 399 | 9.76e-38 | 144 |
MsG0480021233.01.T01 | AT1G79820 | 31.084 | 415 | 251 | 10 | 28 | 437 | 52 | 436 | 1.39e-37 | 144 |
MsG0480021233.01.T01 | AT1G67300 | 26.852 | 432 | 279 | 10 | 6 | 428 | 23 | 426 | 1.58e-37 | 143 |
MsG0480021233.01.T01 | AT1G67300 | 26.852 | 432 | 279 | 10 | 6 | 428 | 23 | 426 | 1.58e-37 | 143 |
MsG0480021233.01.T01 | AT1G77210 | 27.419 | 372 | 246 | 7 | 138 | 506 | 5 | 355 | 4.68e-37 | 140 |
MsG0480021233.01.T01 | AT3G20460 | 26.432 | 454 | 296 | 9 | 45 | 493 | 68 | 488 | 6.18e-37 | 143 |
MsG0480021233.01.T01 | AT4G04760 | 25.806 | 465 | 301 | 13 | 35 | 491 | 36 | 464 | 4.87e-36 | 140 |
MsG0480021233.01.T01 | AT1G54730 | 29.375 | 320 | 194 | 7 | 41 | 357 | 43 | 333 | 2.57e-34 | 132 |
MsG0480021233.01.T01 | AT3G51490 | 35.776 | 232 | 134 | 7 | 34 | 257 | 8 | 232 | 4.56e-34 | 137 |
MsG0480021233.01.T01 | AT3G51490 | 28.682 | 258 | 165 | 7 | 244 | 491 | 472 | 720 | 7.24e-22 | 100 |
MsG0480021233.01.T01 | AT3G51490 | 35.776 | 232 | 134 | 7 | 34 | 257 | 8 | 232 | 4.80e-34 | 137 |
MsG0480021233.01.T01 | AT3G51490 | 27.165 | 254 | 166 | 7 | 244 | 491 | 472 | 712 | 1.74e-18 | 89.4 |
MsG0480021233.01.T01 | AT1G20840 | 36.364 | 209 | 123 | 4 | 28 | 231 | 2 | 205 | 2.06e-32 | 132 |
MsG0480021233.01.T01 | AT1G20840 | 30.864 | 243 | 150 | 6 | 272 | 503 | 498 | 733 | 1.37e-18 | 89.7 |
MsG0480021233.01.T01 | AT1G20840 | 36.364 | 209 | 123 | 4 | 28 | 231 | 2 | 205 | 2.06e-32 | 132 |
MsG0480021233.01.T01 | AT1G20840 | 30.864 | 243 | 150 | 6 | 272 | 503 | 498 | 733 | 1.37e-18 | 89.7 |
MsG0480021233.01.T01 | AT1G08920 | 25.926 | 459 | 294 | 13 | 41 | 490 | 43 | 464 | 5.11e-32 | 129 |
MsG0480021233.01.T01 | AT1G54730 | 27.632 | 380 | 221 | 10 | 41 | 417 | 43 | 371 | 8.02e-32 | 127 |
MsG0480021233.01.T01 | AT1G08900 | 26.340 | 429 | 284 | 8 | 22 | 445 | 12 | 413 | 1.50e-31 | 127 |
MsG0480021233.01.T01 | AT2G48020 | 26.870 | 361 | 232 | 7 | 23 | 380 | 21 | 352 | 1.95e-31 | 125 |
MsG0480021233.01.T01 | AT4G35300 | 34.404 | 218 | 132 | 6 | 41 | 252 | 15 | 227 | 2.94e-30 | 125 |
MsG0480021233.01.T01 | AT4G35300 | 28.400 | 250 | 155 | 5 | 266 | 502 | 489 | 727 | 1.56e-22 | 102 |
MsG0480021233.01.T01 | AT4G35300 | 34.404 | 218 | 132 | 6 | 41 | 252 | 15 | 227 | 2.94e-30 | 125 |
MsG0480021233.01.T01 | AT4G35300 | 28.400 | 250 | 155 | 5 | 266 | 502 | 489 | 727 | 1.56e-22 | 102 |
MsG0480021233.01.T01 | AT4G35300 | 34.404 | 218 | 132 | 6 | 41 | 252 | 15 | 227 | 2.94e-30 | 125 |
MsG0480021233.01.T01 | AT4G35300 | 28.400 | 250 | 155 | 5 | 266 | 502 | 489 | 727 | 1.56e-22 | 102 |
MsG0480021233.01.T01 | AT4G35300 | 34.404 | 218 | 132 | 6 | 41 | 252 | 15 | 227 | 3.29e-30 | 125 |
MsG0480021233.01.T01 | AT4G35300 | 28.400 | 250 | 155 | 5 | 266 | 502 | 499 | 737 | 1.82e-22 | 102 |
MsG0480021233.01.T01 | AT4G35300 | 34.404 | 218 | 132 | 6 | 41 | 252 | 15 | 227 | 3.29e-30 | 125 |
MsG0480021233.01.T01 | AT4G35300 | 28.400 | 250 | 155 | 5 | 266 | 502 | 499 | 737 | 1.82e-22 | 102 |
MsG0480021233.01.T01 | AT4G35300 | 34.404 | 218 | 132 | 6 | 41 | 252 | 15 | 227 | 3.29e-30 | 125 |
MsG0480021233.01.T01 | AT4G35300 | 28.400 | 250 | 155 | 5 | 266 | 502 | 499 | 737 | 1.82e-22 | 102 |
MsG0480021233.01.T01 | AT4G35300 | 34.404 | 218 | 132 | 6 | 41 | 252 | 15 | 227 | 3.29e-30 | 125 |
MsG0480021233.01.T01 | AT4G35300 | 28.400 | 250 | 155 | 5 | 266 | 502 | 499 | 737 | 1.82e-22 | 102 |
MsG0480021233.01.T01 | AT4G35300 | 34.404 | 218 | 132 | 6 | 41 | 252 | 15 | 227 | 3.29e-30 | 125 |
MsG0480021233.01.T01 | AT4G35300 | 28.400 | 250 | 155 | 5 | 266 | 502 | 499 | 737 | 1.82e-22 | 102 |
MsG0480021233.01.T01 | AT4G35300 | 34.404 | 218 | 132 | 6 | 41 | 252 | 15 | 227 | 3.29e-30 | 125 |
MsG0480021233.01.T01 | AT4G35300 | 28.400 | 250 | 155 | 5 | 266 | 502 | 499 | 737 | 1.82e-22 | 102 |
MsG0480021233.01.T01 | AT4G35300 | 34.404 | 218 | 132 | 6 | 41 | 252 | 15 | 227 | 3.29e-30 | 125 |
MsG0480021233.01.T01 | AT4G35300 | 28.400 | 250 | 155 | 5 | 266 | 502 | 499 | 737 | 1.82e-22 | 102 |
MsG0480021233.01.T01 | AT1G08920 | 25.536 | 466 | 294 | 14 | 41 | 490 | 43 | 471 | 9.70e-30 | 122 |
MsG0480021233.01.T01 | AT1G54730 | 28.383 | 303 | 188 | 7 | 41 | 339 | 43 | 320 | 3.23e-29 | 118 |
MsG0480021233.01.T01 | AT1G54730 | 28.383 | 303 | 188 | 7 | 41 | 339 | 43 | 320 | 3.23e-29 | 118 |
MsG0480021233.01.T01 | AT2G48020 | 26.176 | 340 | 219 | 7 | 23 | 359 | 21 | 331 | 7.05e-28 | 115 |
MsG0480021233.01.T01 | AT3G51490 | 36.757 | 185 | 106 | 5 | 80 | 257 | 2 | 182 | 1.19e-27 | 117 |
MsG0480021233.01.T01 | AT3G51490 | 28.682 | 258 | 165 | 7 | 244 | 491 | 422 | 670 | 9.71e-22 | 99.8 |
MsG0480021233.01.T01 | AT3G05155 | 25.705 | 319 | 204 | 8 | 41 | 357 | 38 | 325 | 4.00e-26 | 109 |
MsG0480021233.01.T01 | AT1G08920 | 25.765 | 392 | 246 | 12 | 41 | 423 | 43 | 398 | 1.38e-23 | 103 |
MsG0480021233.01.T01 | AT4G35300 | 28.400 | 250 | 155 | 5 | 266 | 502 | 302 | 540 | 1.25e-22 | 101 |
MsG0480021233.01.T01 | AT1G79820 | 30.918 | 207 | 137 | 3 | 28 | 231 | 52 | 255 | 6.88e-17 | 83.6 |
MsG0480021233.01.T01 | AT1G79820 | 33.553 | 152 | 93 | 3 | 342 | 491 | 297 | 442 | 1.60e-11 | 67.0 |
MsG0480021233.01.T01 | AT1G79820 | 33.553 | 152 | 93 | 3 | 342 | 491 | 235 | 380 | 1.20e-11 | 67.0 |
MsG0480021233.01.T01 | AT5G43340 | 22.458 | 472 | 280 | 16 | 66 | 488 | 68 | 502 | 4.85e-11 | 65.5 |
MsG0480021233.01.T01 | AT3G13050 | 26.136 | 440 | 265 | 15 | 81 | 486 | 74 | 487 | 5.04e-11 | 65.5 |
MsG0480021233.01.T01 | AT3G13050 | 26.136 | 440 | 265 | 15 | 81 | 486 | 74 | 487 | 5.04e-11 | 65.5 |
MsG0480021233.01.T01 | AT3G13050 | 26.136 | 440 | 265 | 15 | 81 | 486 | 74 | 487 | 5.04e-11 | 65.5 |
MsG0480021233.01.T01 | AT3G13050 | 26.136 | 440 | 265 | 15 | 81 | 486 | 74 | 487 | 5.04e-11 | 65.5 |
Find 140 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCAAACACAAAGCTAAAT+TGG | 0.143556 | 4:+55544499 | MsG0480021233.01.T01:CDS |
TCAAAACTATCACTTAAATT+AGG | 0.212301 | 4:+55543811 | MsG0480021233.01.T01:CDS |
TTTACCATATCCAAGTAAAA+TGG | 0.248936 | 4:-55542752 | None:intergenic |
TACCATGTGGGAAGACTTAC+TGG | 0.270044 | 4:+55542476 | MsG0480021233.01.T01:five_prime_UTR |
CTCATTGGTTCATGTCTTGC+CGG | 0.296833 | 4:+55543100 | MsG0480021233.01.T01:CDS |
GAAGAAATGGAAGCCTCTTT+TGG | 0.298781 | 4:+55544816 | MsG0480021233.01.T01:CDS |
CTTGTGGTGTTGTGGTGAAT+AGG | 0.316596 | 4:+55544646 | MsG0480021233.01.T01:CDS |
TAAGGCTCCGGCAAAGAAAA+TGG | 0.330343 | 4:-55543173 | None:intergenic |
TTTGGAGGTATTGCTACAAT+TGG | 0.332942 | 4:+55544744 | MsG0480021233.01.T01:CDS |
CGTTACACCATCGTGTTTGC+CGG | 0.353883 | 4:+55543148 | MsG0480021233.01.T01:CDS |
GGGAAAATTGAGGTCTTGTT+AGG | 0.356338 | 4:+55543058 | MsG0480021233.01.T01:CDS |
TAGTCCTACAATCTTCAAAA+AGG | 0.362052 | 4:+55544290 | MsG0480021233.01.T01:CDS |
CAAGTTGCACAAGTTCAGTT+AGG | 0.362764 | 4:+55544891 | MsG0480021233.01.T01:CDS |
TTGTAGCAATACCTCCAAAT+AGG | 0.368433 | 4:-55544740 | None:intergenic |
TATATTAATATAATATATAT+TGG | 0.371710 | 4:+55544962 | MsG0480021233.01.T01:three_prime_UTR |
AACTACAACTTCCTCATGTT+TGG | 0.374495 | 4:+55543214 | MsG0480021233.01.T01:CDS |
GAGAAAGCCACGAGAGGAAG+CGG | 0.386076 | 4:-55543308 | None:intergenic |
ACATCGTCGTTGCAATCTTC+AGG | 0.387621 | 4:-55544120 | None:intergenic |
TTCAAACGAAATGACTTGTA+TGG | 0.389487 | 4:+55545016 | MsG0480021233.01.T01:three_prime_UTR |
TATGTAGCAACTTTCTCAAT+TGG | 0.390137 | 4:+55544555 | MsG0480021233.01.T01:CDS |
AGGTAAAACACTTGAAGAAA+TGG | 0.392070 | 4:+55544803 | MsG0480021233.01.T01:CDS |
TCTACGATGATGTAAGCTTT+TGG | 0.395733 | 4:+55542499 | MsG0480021233.01.T01:five_prime_UTR |
CAATTAATGATCAATTGATT+AGG | 0.396904 | 4:+55542167 | MsG0480021233.01.T01:five_prime_UTR |
AACTGTCCTCGTGGACCCTT+TGG | 0.397538 | 4:-55542306 | None:intergenic |
GAGACTTCAGCGGTATAGAC+TGG | 0.401754 | 4:-55543283 | None:intergenic |
AACTTGCAAGTGGGTTATAT+AGG | 0.417404 | 4:-55542522 | None:intergenic |
ACAAGTAAAGCTTATATTTG+TGG | 0.423669 | 4:+55542117 | MsG0480021233.01.T01:intron |
AAAACACTGGTGAAGGTGTA+TGG | 0.424900 | 4:+55544160 | MsG0480021233.01.T01:CDS |
AGTTGTCCTAATGTTGCTAA+TGG | 0.425418 | 4:+55542016 | None:intergenic |
GTTAGATCTTAGTACTTAAA+CGG | 0.431933 | 4:+55542542 | MsG0480021233.01.T01:five_prime_UTR |
TGCTAATGGACCACAAACTT+TGG | 0.443326 | 4:+55542030 | MsG0480021233.01.T01:five_prime_UTR |
TTCAAACACAAAGCTAAATT+GGG | 0.444039 | 4:+55544500 | MsG0480021233.01.T01:CDS |
AGAAAGCCACGAGAGGAAGC+GGG | 0.446522 | 4:-55543307 | None:intergenic |
TCTTTACTCATTGCATCGAT+TGG | 0.450933 | 4:+55542219 | MsG0480021233.01.T01:five_prime_UTR |
AACTATCACTTAAATTAGGT+TGG | 0.451312 | 4:+55543815 | MsG0480021233.01.T01:CDS |
AACATGAGGAAGTTGTAGTT+TGG | 0.455379 | 4:-55543211 | None:intergenic |
TTGGAGGTATTGCTACAATT+GGG | 0.464188 | 4:+55544745 | MsG0480021233.01.T01:CDS |
TTGTGGTGTTGTGGTGAATA+GGG | 0.468285 | 4:+55544647 | MsG0480021233.01.T01:CDS |
CCTTTGAGGTTGAGGGCACA+AGG | 0.470587 | 4:+55544618 | MsG0480021233.01.T01:CDS |
AGCATAGCCGATGCCAACTC+CGG | 0.471335 | 4:-55543248 | None:intergenic |
ATCAACATCTACTCTCTCAT+TGG | 0.471388 | 4:+55543085 | MsG0480021233.01.T01:CDS |
TGCCAACTCCGGCGACAAAA+CGG | 0.474251 | 4:-55543237 | None:intergenic |
TGGTGAATAGGGTCACTAGT+GGG | 0.475348 | 4:+55544658 | MsG0480021233.01.T01:CDS |
CCTTAGCTGAGCCTCTTCCT+TGG | 0.476032 | 4:-55543977 | None:intergenic |
ACGAGCCATCGTGGTGACTC+TGG | 0.481166 | 4:-55543901 | None:intergenic |
CTTTGCCGGAGCCTTACTCA+TGG | 0.483078 | 4:+55543180 | MsG0480021233.01.T01:CDS |
ACAAAGCTAAATTGGGCCAT+TGG | 0.485743 | 4:+55544507 | MsG0480021233.01.T01:CDS |
ACTCACTAGTGTTGGTGGTA+TGG | 0.486491 | 4:+55544431 | MsG0480021233.01.T01:CDS |
GAGAAAATCAAAGAATACTA+AGG | 0.489393 | 4:+55544848 | MsG0480021233.01.T01:CDS |
TCCAGCGGCTTGTTTAATCT+CGG | 0.492502 | 4:-55544094 | None:intergenic |
CTGTTACTCACTAGTGTTGG+TGG | 0.493290 | 4:+55544426 | MsG0480021233.01.T01:CDS |
AGACTTCAGCGGTATAGACT+GGG | 0.494870 | 4:-55543282 | None:intergenic |
CTAATTGCAACCATAGCCGT+TGG | 0.498739 | 4:+55544339 | MsG0480021233.01.T01:CDS |
TCCAAGTAAAATGGAAGTCA+TGG | 0.500166 | 4:-55542743 | None:intergenic |
TCTAAAGGAATTACGATTGG+TGG | 0.500778 | 4:+55544708 | MsG0480021233.01.T01:CDS |
TTTGTCGCCGGAGTTGGCAT+CGG | 0.500928 | 4:+55543241 | MsG0480021233.01.T01:CDS |
CTCGTAATGAGAGGTCGTTT+AGG | 0.500941 | 4:+55543919 | MsG0480021233.01.T01:CDS |
TGGTGAGAAACCCATGAGTA+AGG | 0.502832 | 4:-55543191 | None:intergenic |
ACTAAGATCTAACTTGCAAG+TGG | 0.507405 | 4:-55542532 | None:intergenic |
CATATTGTAATAGCTGCACT+AGG | 0.508847 | 4:+55544219 | MsG0480021233.01.T01:CDS |
TTTGCCGGAGCCTTACTCAT+GGG | 0.509489 | 4:+55543181 | MsG0480021233.01.T01:CDS |
TGTCCTCGTGGACCCTTTGG+TGG | 0.511470 | 4:-55542303 | None:intergenic |
CTTAACAAATCCAACGGCTA+TGG | 0.515197 | 4:-55544349 | None:intergenic |
GCAACTTTCTCAATTGGTGC+AGG | 0.518421 | 4:+55544561 | MsG0480021233.01.T01:CDS |
AATCCAGTCGGAGGTTCTGC+CGG | 0.519805 | 4:-55543119 | None:intergenic |
CAACAAAACTTCAGATTCCA+AGG | 0.520556 | 4:+55543960 | MsG0480021233.01.T01:CDS |
TATCTACTAAGTTGAGACAT+TGG | 0.520634 | 4:-55544916 | None:intergenic |
AAGTTGCACAAGTTCAGTTA+GGG | 0.522313 | 4:+55544892 | MsG0480021233.01.T01:CDS |
AACTTCAGATTCCAAGGAAG+AGG | 0.522917 | 4:+55543966 | MsG0480021233.01.T01:CDS |
GGCAGAACCTCCGACTGGAT+TGG | 0.526767 | 4:+55543121 | MsG0480021233.01.T01:CDS |
GAAAGCCACGAGAGGAAGCG+GGG | 0.529030 | 4:-55543306 | None:intergenic |
ATTGGCATATAATAATACTA+AGG | 0.533545 | 4:+55542237 | MsG0480021233.01.T01:five_prime_UTR |
AAAGCCACGAGAGGAAGCGG+GGG | 0.538579 | 4:-55543305 | None:intergenic |
ACAGTGGACGACGACCATAT+CGG | 0.540286 | 4:-55544407 | None:intergenic |
AGTCACTATGTTCCACCAAA+GGG | 0.544280 | 4:+55542291 | MsG0480021233.01.T01:five_prime_UTR |
ATAAACAGTGGAATATTAGT+CGG | 0.544490 | 4:+55543766 | MsG0480021233.01.T01:CDS |
TTAGGTTGGAGAATGATGCT+TGG | 0.547667 | 4:+55543829 | MsG0480021233.01.T01:CDS |
GCTAGTAGCTCTCTCAAGGT+TGG | 0.549325 | 4:+55542142 | MsG0480021233.01.T01:five_prime_UTR |
ACTACTATAAACCCATGTGA+TGG | 0.549519 | 4:-55544586 | None:intergenic |
GCCGAGATTAAACAAGCCGC+TGG | 0.549761 | 4:+55544093 | MsG0480021233.01.T01:CDS |
GTAAGTCTTCCCACATGGTA+TGG | 0.552299 | 4:-55542473 | None:intergenic |
TAGTCACTATGTTCCACCAA+AGG | 0.555124 | 4:+55542290 | MsG0480021233.01.T01:five_prime_UTR |
TCCGGCAAAGAAAATGGCGC+CGG | 0.556292 | 4:-55543167 | None:intergenic |
CACTGTGTGACTCAACAAGT+TGG | 0.561003 | 4:-55542394 | None:intergenic |
CCTTGTGCCCTCAACCTCAA+AGG | 0.562045 | 4:-55544618 | None:intergenic |
AGTATCCGACGGGAAAATTG+AGG | 0.564384 | 4:+55543048 | MsG0480021233.01.T01:CDS |
TTGTCTAAAGGAATTACGAT+TGG | 0.569189 | 4:+55544705 | MsG0480021233.01.T01:CDS |
AGGTGCAGCTTGTGGTGTTG+TGG | 0.570667 | 4:+55544638 | MsG0480021233.01.T01:CDS |
GAGGTATTGCTACAATTGGG+TGG | 0.571968 | 4:+55544748 | MsG0480021233.01.T01:CDS |
GTGGTGAATAGGGTCACTAG+TGG | 0.574539 | 4:+55544657 | MsG0480021233.01.T01:CDS |
CTACTATAAACCCATGTGAT+GGG | 0.576148 | 4:-55544585 | None:intergenic |
TTGCCGGCAGAACCTCCGAC+TGG | 0.576660 | 4:+55543116 | MsG0480021233.01.T01:CDS |
TGGCTAAGACTCCAACGGCT+AGG | 0.579484 | 4:-55543876 | None:intergenic |
ATATGACGAACTGCGGGTGT+AGG | 0.580443 | 4:-55544201 | None:intergenic |
GGTAGCTAGTAGCTCTCTCA+AGG | 0.581765 | 4:+55542138 | MsG0480021233.01.T01:five_prime_UTR |
GAAACCCATGAGTAAGGCTC+CGG | 0.584696 | 4:-55543185 | None:intergenic |
TTGGTGCAGGACCCATCACA+TGG | 0.585356 | 4:+55544574 | MsG0480021233.01.T01:CDS |
CCACGATGGCTCGTAATGAG+AGG | 0.586462 | 4:+55543910 | MsG0480021233.01.T01:CDS |
CGACAAAACGGCCAAACATG+AGG | 0.587511 | 4:-55543225 | None:intergenic |
CTTTCTCACTTCTTTCCCAG+AGG | 0.589254 | 4:+55543324 | MsG0480021233.01.T01:CDS |
ACAGATATTGGTGTTATGAG+TGG | 0.592393 | 4:+55542995 | MsG0480021233.01.T01:intron |
CCTTCAGTAATCCTAGCCGT+TGG | 0.594994 | 4:+55543865 | MsG0480021233.01.T01:CDS |
AGGGCACAAGGTGCAGCTTG+TGG | 0.595043 | 4:+55544630 | MsG0480021233.01.T01:CDS |
CCATCGTGGTGACTCTGGCA+TGG | 0.596487 | 4:-55543896 | None:intergenic |
CCACTGTTACTCACTAGTGT+TGG | 0.601446 | 4:+55544423 | MsG0480021233.01.T01:CDS |
CCAAGGAAGAGGCTCAGCTA+AGG | 0.609894 | 4:+55543977 | MsG0480021233.01.T01:CDS |
GAGACCTTAAAGTATCCGAC+GGG | 0.613965 | 4:+55543038 | MsG0480021233.01.T01:CDS |
TTGAATGATCGATGATCGTA+AGG | 0.614986 | 4:-55544482 | None:intergenic |
CAAAACTACAGCGTCTACAC+CGG | 0.619548 | 4:-55544265 | None:intergenic |
GGGAAAGATAGTTGAAGCAA+AGG | 0.622531 | 4:+55542639 | MsG0480021233.01.T01:CDS |
ATTACAATATGACGAACTGC+GGG | 0.625794 | 4:-55544207 | None:intergenic |
AGAGACCTTAAAGTATCCGA+CGG | 0.628792 | 4:+55543037 | MsG0480021233.01.T01:CDS |
CAAGGTCTTAACAAATCCAA+CGG | 0.634572 | 4:-55544355 | None:intergenic |
AGTTGCTATACTCAATCCAA+TGG | 0.639610 | 4:-55544523 | None:intergenic |
TGGCATGGCTAAGACTCCAA+CGG | 0.641928 | 4:-55543881 | None:intergenic |
GCGAATGCAAACTGTCCTCG+TGG | 0.642736 | 4:-55542315 | None:intergenic |
AATGGCGCCGGCAAACACGA+TGG | 0.644723 | 4:-55543155 | None:intergenic |
CCAACGGCTAGGATTACTGA+AGG | 0.646658 | 4:-55543865 | None:intergenic |
CCTCTCATTACGAGCCATCG+TGG | 0.646747 | 4:-55543910 | None:intergenic |
TGGAGAATGATGCTTGGAGT+AGG | 0.648761 | 4:+55543835 | MsG0480021233.01.T01:CDS |
GACCAGTAAGTCTTCCCACA+TGG | 0.653245 | 4:-55542478 | None:intergenic |
GGTGAATAGGGTCACTAGTG+GGG | 0.657688 | 4:+55544659 | MsG0480021233.01.T01:CDS |
ATATTGTAATAGCTGCACTA+GGG | 0.658336 | 4:+55544220 | MsG0480021233.01.T01:CDS |
AGAAGTGAGAAAGCCACGAG+AGG | 0.660349 | 4:-55543314 | None:intergenic |
TATTACAATATGACGAACTG+CGG | 0.663026 | 4:-55544208 | None:intergenic |
AATCGTAATTCCTTTAGACA+AGG | 0.664820 | 4:-55544703 | None:intergenic |
TGGTGCAGGACCCATCACAT+GGG | 0.673212 | 4:+55544575 | MsG0480021233.01.T01:CDS |
GCAATCTTCAGGTATTCCAG+CGG | 0.674448 | 4:-55544109 | None:intergenic |
CTAAGATCTAACTTGCAAGT+GGG | 0.676200 | 4:-55542531 | None:intergenic |
AGTAGCCACTAAAATAAACA+AGG | 0.678884 | 4:-55544373 | None:intergenic |
TATTGTGTCAAGATGAGTGA+GGG | 0.685265 | 4:+55542619 | MsG0480021233.01.T01:exon |
CCAACACTAGTGAGTAACAG+TGG | 0.692907 | 4:-55544423 | None:intergenic |
AAAGCTACTCTAAAACACAC+AGG | 0.697373 | 4:-55544986 | None:intergenic |
GACTTCAGCGGTATAGACTG+GGG | 0.705438 | 4:-55543281 | None:intergenic |
ACGACGACCAATCCAGTCGG+AGG | 0.711720 | 4:-55543128 | None:intergenic |
GTTCCACCAAAGGGTCCACG+AGG | 0.726763 | 4:+55542300 | MsG0480021233.01.T01:five_prime_UTR |
GTAACGACGACCAATCCAGT+CGG | 0.738715 | 4:-55543131 | None:intergenic |
ATTATGCTTCCAGAAACACA+AGG | 0.739677 | 4:+55544783 | MsG0480021233.01.T01:CDS |
CCATGCCAGAGTCACCACGA+TGG | 0.743650 | 4:+55543896 | MsG0480021233.01.T01:CDS |
ATATTGTGTCAAGATGAGTG+AGG | 0.744896 | 4:+55542618 | MsG0480021233.01.T01:exon |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATTAATATAATATATAT+TGG | + | Chr4:55544962-55544981 | MsG0480021233.01.T01:three_prime_UTR | 0.0% |
!! | AAATAAAATATAATATGAGA+TGG | - | Chr4:55542791-55542810 | None:intergenic | 10.0% |
!! | ATAAATAACTCTTATAAAAC+TGG | + | Chr4:55543520-55543539 | MsG0480021233.01.T01:intron | 15.0% |
!!! | AATGCATAATTTCTTTTAAA+AGG | - | Chr4:55543612-55543631 | None:intergenic | 15.0% |
!!! | TATTTTTTTGTCGATAAAAT+AGG | + | Chr4:55544067-55544086 | MsG0480021233.01.T01:intron | 15.0% |
!!! | TTTTTTATCTCTATTTATCA+AGG | - | Chr4:55543482-55543501 | None:intergenic | 15.0% |
!! | ATAACAAGAGGATAAAATAT+TGG | - | Chr4:55542938-55542957 | None:intergenic | 20.0% |
!! | ATTGGCATATAATAATACTA+AGG | + | Chr4:55542237-55542256 | MsG0480021233.01.T01:five_prime_UTR | 20.0% |
!! | CAATTAATGATCAATTGATT+AGG | + | Chr4:55542167-55542186 | MsG0480021233.01.T01:five_prime_UTR | 20.0% |
!! | GAGATAAAAAAAAGTAAAAG+TGG | + | Chr4:55543491-55543510 | MsG0480021233.01.T01:intron | 20.0% |
!! | GATAGAATAGTAAATTTCAA+TGG | + | Chr4:55543554-55543573 | MsG0480021233.01.T01:intron | 20.0% |
!! | TCAAAACTATCACTTAAATT+AGG | + | Chr4:55543811-55543830 | MsG0480021233.01.T01:CDS | 20.0% |
!! | TCAAATTGATCATTTATTCT+CGG | - | Chr4:55544007-55544026 | None:intergenic | 20.0% |
!! | TCATAATACACGATAATATA+GGG | + | Chr4:55543699-55543718 | MsG0480021233.01.T01:intron | 20.0% |
!! | TTCATAATACACGATAATAT+AGG | + | Chr4:55543698-55543717 | MsG0480021233.01.T01:intron | 20.0% |
!! | TTTCAATGATAAGAAAAAGA+CGG | + | Chr4:55545061-55545080 | MsG0480021233.01.T01:three_prime_UTR | 20.0% |
!!! | GATAAAAATGTGTATTGATA+TGG | + | Chr4:55544935-55544954 | MsG0480021233.01.T01:three_prime_UTR | 20.0% |
!!! | GTGCTATATTGTTTTATTAA+TGG | + | Chr4:55542863-55542882 | MsG0480021233.01.T01:intron | 20.0% |
!!! | TTTTATTTAACCAAAGTTTG+TGG | - | Chr4:55542043-55542062 | None:intergenic | 20.0% |
!!! | TTTTCATTCATAATAACAAG+AGG | - | Chr4:55542950-55542969 | None:intergenic | 20.0% |
! | AACTATCACTTAAATTAGGT+TGG | + | Chr4:55543815-55543834 | MsG0480021233.01.T01:CDS | 25.0% |
! | ACAAGTAAAGCTTATATTTG+TGG | + | Chr4:55542117-55542136 | MsG0480021233.01.T01:intron | 25.0% |
! | AGGAATTATTGTTACATTAC+GGG | - | Chr4:55542092-55542111 | None:intergenic | 25.0% |
! | ATAAACAGTGGAATATTAGT+CGG | + | Chr4:55543766-55543785 | MsG0480021233.01.T01:CDS | 25.0% |
! | ATTCAAACACAAAGCTAAAT+TGG | + | Chr4:55544499-55544518 | MsG0480021233.01.T01:CDS | 25.0% |
! | CAAGTAAAAGTTAAAAACAC+TGG | + | Chr4:55544147-55544166 | MsG0480021233.01.T01:CDS | 25.0% |
! | CATAATACACGATAATATAG+GGG | + | Chr4:55543700-55543719 | MsG0480021233.01.T01:intron | 25.0% |
! | GAGAAAATCAAAGAATACTA+AGG | + | Chr4:55544848-55544867 | MsG0480021233.01.T01:CDS | 25.0% |
! | GAGGAATTATTGTTACATTA+CGG | - | Chr4:55542093-55542112 | None:intergenic | 25.0% |
! | GATTCTATATGCAATATATG+TGG | - | Chr4:55543652-55543671 | None:intergenic | 25.0% |
! | GTTAGATCTTAGTACTTAAA+CGG | + | Chr4:55542542-55542561 | MsG0480021233.01.T01:five_prime_UTR | 25.0% |
! | TAAATTTCAATGGATGTTAG+TGG | + | Chr4:55543564-55543583 | MsG0480021233.01.T01:intron | 25.0% |
! | TTCAAACACAAAGCTAAATT+GGG | + | Chr4:55544500-55544519 | MsG0480021233.01.T01:CDS | 25.0% |
! | TTTACCATATCCAAGTAAAA+TGG | - | Chr4:55542755-55542774 | None:intergenic | 25.0% |
!! | GTTAGTGGAAAATTTGTTTA+GGG | + | Chr4:55543579-55543598 | MsG0480021233.01.T01:intron | 25.0% |
!! | GTTTCTCTTTGAAGAAAATT+TGG | - | Chr4:55542827-55542846 | None:intergenic | 25.0% |
!! | TCTTTGAAGAAAATTTGGAT+AGG | - | Chr4:55542822-55542841 | None:intergenic | 25.0% |
!! | TGTTAGTGGAAAATTTGTTT+AGG | + | Chr4:55543578-55543597 | MsG0480021233.01.T01:intron | 25.0% |
!! | TTTTCAAAGCTCGTTTATTA+TGG | + | Chr4:55543374-55543393 | MsG0480021233.01.T01:intron | 25.0% |
!!! | AAAGCATACTTGTTTCTTTT+AGG | - | Chr4:55542703-55542722 | None:intergenic | 25.0% |
!!! | GGAGATTTTTTAGAAGTTAA+TGG | + | Chr4:55543421-55543440 | MsG0480021233.01.T01:intron | 25.0% |
!!! | TAAGACCTTGTTTATTTTAG+TGG | + | Chr4:55544368-55544387 | MsG0480021233.01.T01:CDS | 25.0% |
!!! | TTAATTGATTTGATATCTGC+AGG | + | Chr4:55543738-55543757 | MsG0480021233.01.T01:intron | 25.0% |
AAAGTTAAAAACACTGGTGA+AGG | + | Chr4:55544153-55544172 | MsG0480021233.01.T01:CDS | 30.0% | |
AATCGTAATTCCTTTAGACA+AGG | - | Chr4:55544706-55544725 | None:intergenic | 30.0% | |
AGGTAAAACACTTGAAGAAA+TGG | + | Chr4:55544803-55544822 | MsG0480021233.01.T01:CDS | 30.0% | |
AGTAGCCACTAAAATAAACA+AGG | - | Chr4:55544376-55544395 | None:intergenic | 30.0% | |
ATATTGTAATAGCTGCACTA+GGG | + | Chr4:55544220-55544239 | MsG0480021233.01.T01:CDS | 30.0% | |
TAGTCCTACAATCTTCAAAA+AGG | + | Chr4:55544290-55544309 | MsG0480021233.01.T01:CDS | 30.0% | |
TATGTAGCAACTTTCTCAAT+TGG | + | Chr4:55544555-55544574 | MsG0480021233.01.T01:CDS | 30.0% | |
TATTACAATATGACGAACTG+CGG | - | Chr4:55544211-55544230 | None:intergenic | 30.0% | |
TTGTCTAAAGGAATTACGAT+TGG | + | Chr4:55544705-55544724 | MsG0480021233.01.T01:CDS | 30.0% | |
! | AAGCCTCTTTTGGTAAAATT+TGG | + | Chr4:55544826-55544845 | MsG0480021233.01.T01:CDS | 30.0% |
! | ACTTCCATTTTACTTGGATA+TGG | + | Chr4:55542748-55542767 | MsG0480021233.01.T01:CDS | 30.0% |
! | ACTTTTATGTTAGACCGATA+TGG | + | Chr4:55544393-55544412 | MsG0480021233.01.T01:CDS | 30.0% |
! | GTAGTGAAATTTTTCCTTTG+AGG | + | Chr4:55544604-55544623 | MsG0480021233.01.T01:CDS | 30.0% |
! | TATCTACTAAGTTGAGACAT+TGG | - | Chr4:55544919-55544938 | None:intergenic | 30.0% |
! | TCTATTTTACCATACCATGT+GGG | + | Chr4:55542464-55542483 | MsG0480021233.01.T01:five_prime_UTR | 30.0% |
! | TCTCCAAATTTTACCAAAAG+AGG | - | Chr4:55544832-55544851 | None:intergenic | 30.0% |
! | TTCAAACGAAATGACTTGTA+TGG | + | Chr4:55545016-55545035 | MsG0480021233.01.T01:three_prime_UTR | 30.0% |
! | TTCTATTTTACCATACCATG+TGG | + | Chr4:55542463-55542482 | MsG0480021233.01.T01:five_prime_UTR | 30.0% |
! | TTTCTTTTAGGCTTCTTTTG+TGG | - | Chr4:55542691-55542710 | None:intergenic | 30.0% |
!!! | AAATTTTTCCTTTGAGGTTG+AGG | + | Chr4:55544610-55544629 | MsG0480021233.01.T01:CDS | 30.0% |
!!! | AATTTTTCCTTTGAGGTTGA+GGG | + | Chr4:55544611-55544630 | MsG0480021233.01.T01:CDS | 30.0% |
!!! | CATTTTTTTCAACAAGCTTC+CGG | + | Chr4:55544246-55544265 | MsG0480021233.01.T01:CDS | 30.0% |
AACATGAGGAAGTTGTAGTT+TGG | - | Chr4:55543214-55543233 | None:intergenic | 35.0% | |
AACTACAACTTCCTCATGTT+TGG | + | Chr4:55543214-55543233 | MsG0480021233.01.T01:CDS | 35.0% | |
AAGTTGCACAAGTTCAGTTA+GGG | + | Chr4:55544892-55544911 | MsG0480021233.01.T01:CDS | 35.0% | |
ACACGTCATCATACAGATAT+TGG | + | Chr4:55542983-55543002 | MsG0480021233.01.T01:intron | 35.0% | |
ACTACTATAAACCCATGTGA+TGG | - | Chr4:55544589-55544608 | None:intergenic | 35.0% | |
AGTTGCTATACTCAATCCAA+TGG | - | Chr4:55544526-55544545 | None:intergenic | 35.0% | |
ATAAGCTTTACTTGTCGTTG+AGG | - | Chr4:55542112-55542131 | None:intergenic | 35.0% | |
ATATTGTGTCAAGATGAGTG+AGG | + | Chr4:55542618-55542637 | MsG0480021233.01.T01:exon | 35.0% | |
ATCAACATCTACTCTCTCAT+TGG | + | Chr4:55543085-55543104 | MsG0480021233.01.T01:CDS | 35.0% | |
ATTACAATATGACGAACTGC+GGG | - | Chr4:55544210-55544229 | None:intergenic | 35.0% | |
ATTATGCTTCCAGAAACACA+AGG | + | Chr4:55544783-55544802 | MsG0480021233.01.T01:CDS | 35.0% | |
CAACAAAACTTCAGATTCCA+AGG | + | Chr4:55543960-55543979 | MsG0480021233.01.T01:CDS | 35.0% | |
CAAGGTCTTAACAAATCCAA+CGG | - | Chr4:55544358-55544377 | None:intergenic | 35.0% | |
CATATTGTAATAGCTGCACT+AGG | + | Chr4:55544219-55544238 | MsG0480021233.01.T01:CDS | 35.0% | |
CTACAATCTTCAAAAAGGCT+GGG | + | Chr4:55544295-55544314 | MsG0480021233.01.T01:CDS | 35.0% | |
CTACTATAAACCCATGTGAT+GGG | - | Chr4:55544588-55544607 | None:intergenic | 35.0% | |
TAAAGAAGAGACTAACCTCT+GGG | - | Chr4:55543342-55543361 | None:intergenic | 35.0% | |
TATTGTGTCAAGATGAGTGA+GGG | + | Chr4:55542619-55542638 | MsG0480021233.01.T01:exon | 35.0% | |
TCCAAGTAAAATGGAAGTCA+TGG | - | Chr4:55542746-55542765 | None:intergenic | 35.0% | |
TCTAAAGGAATTACGATTGG+TGG | + | Chr4:55544708-55544727 | MsG0480021233.01.T01:CDS | 35.0% | |
TTAAAGAAGAGACTAACCTC+TGG | - | Chr4:55543343-55543362 | None:intergenic | 35.0% | |
TTGAATGATCGATGATCGTA+AGG | - | Chr4:55544485-55544504 | None:intergenic | 35.0% | |
TTGTAGCAATACCTCCAAAT+AGG | - | Chr4:55544743-55544762 | None:intergenic | 35.0% | |
! | ACTAAGATCTAACTTGCAAG+TGG | - | Chr4:55542535-55542554 | None:intergenic | 35.0% |
! | ACTTTTCTGTCCTTGTCTAA+AGG | + | Chr4:55544693-55544712 | MsG0480021233.01.T01:CDS | 35.0% |
! | AGTGTTTTACCTTGTGTTTC+TGG | - | Chr4:55544795-55544814 | None:intergenic | 35.0% |
! | CTAAGATCTAACTTGCAAGT+GGG | - | Chr4:55542534-55542553 | None:intergenic | 35.0% |
! | TCCATGACTTCCATTTTACT+TGG | + | Chr4:55542742-55542761 | MsG0480021233.01.T01:CDS | 35.0% |
! | TCTACGATGATGTAAGCTTT+TGG | + | Chr4:55542499-55542518 | MsG0480021233.01.T01:five_prime_UTR | 35.0% |
! | TCTTTACTCATTGCATCGAT+TGG | + | Chr4:55542219-55542238 | MsG0480021233.01.T01:five_prime_UTR | 35.0% |
!! | AAAGCTACTCTAAAACACAC+AGG | - | Chr4:55544989-55545008 | None:intergenic | 35.0% |
!! | AACTTGCAAGTGGGTTATAT+AGG | - | Chr4:55542525-55542544 | None:intergenic | 35.0% |
!! | ACAGATATTGGTGTTATGAG+TGG | + | Chr4:55542995-55543014 | MsG0480021233.01.T01:intron | 35.0% |
!! | TTGGAGGTATTGCTACAATT+GGG | + | Chr4:55544745-55544764 | MsG0480021233.01.T01:CDS | 35.0% |
!! | TTTGGAGGTATTGCTACAAT+TGG | + | Chr4:55544744-55544763 | MsG0480021233.01.T01:CDS | 35.0% |
AACTTCAGATTCCAAGGAAG+AGG | + | Chr4:55543966-55543985 | MsG0480021233.01.T01:CDS | 40.0% | |
ACAAAGCTAAATTGGGCCAT+TGG | + | Chr4:55544507-55544526 | MsG0480021233.01.T01:CDS | 40.0% | |
AGTCACTATGTTCCACCAAA+GGG | + | Chr4:55542291-55542310 | MsG0480021233.01.T01:five_prime_UTR | 40.0% | |
CAAGTTGCACAAGTTCAGTT+AGG | + | Chr4:55544891-55544910 | MsG0480021233.01.T01:CDS | 40.0% | |
CCTACAATCTTCAAAAAGGC+TGG | + | Chr4:55544294-55544313 | MsG0480021233.01.T01:CDS | 40.0% | |
CTTAACAAATCCAACGGCTA+TGG | - | Chr4:55544352-55544371 | None:intergenic | 40.0% | |
GGGAAAGATAGTTGAAGCAA+AGG | + | Chr4:55542639-55542658 | MsG0480021233.01.T01:CDS | 40.0% | |
TAGTCACTATGTTCCACCAA+AGG | + | Chr4:55542290-55542309 | MsG0480021233.01.T01:five_prime_UTR | 40.0% | |
TTCAAAAAGGCTGGGATCAA+CGG | + | Chr4:55544303-55544322 | MsG0480021233.01.T01:CDS | 40.0% | |
! | AAAACACTGGTGAAGGTGTA+TGG | + | Chr4:55544160-55544179 | MsG0480021233.01.T01:CDS | 40.0% |
! | AGAGACCTTAAAGTATCCGA+CGG | + | Chr4:55543037-55543056 | MsG0480021233.01.T01:CDS | 40.0% |
! | CTGCAGGTTTTCATAAACAG+TGG | + | Chr4:55543754-55543773 | MsG0480021233.01.T01:intron | 40.0% |
! | GAAGAAATGGAAGCCTCTTT+TGG | + | Chr4:55544816-55544835 | MsG0480021233.01.T01:CDS | 40.0% |
! | GGTGCATTTTTCCTATTTGG+AGG | + | Chr4:55544729-55544748 | MsG0480021233.01.T01:CDS | 40.0% |
! | GGTGGTGCATTTTTCCTATT+TGG | + | Chr4:55544726-55544745 | MsG0480021233.01.T01:CDS | 40.0% |
! | TGCTAATGGACCACAAACTT+TGG | + | Chr4:55542030-55542049 | MsG0480021233.01.T01:five_prime_UTR | 40.0% |
! | TGCTTTTGCTTGTGCTATGT+TGG | + | Chr4:55542717-55542736 | MsG0480021233.01.T01:CDS | 40.0% |
! | TTTTCCCGTCGGATACTTTA+AGG | - | Chr4:55543045-55543064 | None:intergenic | 40.0% |
!! | CCAGCCTTTTTGAAGATTGT+AGG | - | Chr4:55544297-55544316 | None:intergenic | 40.0% |
!! | GGGAAAATTGAGGTCTTGTT+AGG | + | Chr4:55543058-55543077 | MsG0480021233.01.T01:CDS | 40.0% |
!! | TTAGGTTGGAGAATGATGCT+TGG | + | Chr4:55543829-55543848 | MsG0480021233.01.T01:CDS | 40.0% |
!! | TTGTGGTGTTGTGGTGAATA+GGG | + | Chr4:55544647-55544666 | MsG0480021233.01.T01:CDS | 40.0% |
ACATCGTCGTTGCAATCTTC+AGG | - | Chr4:55544123-55544142 | None:intergenic | 45.0% | |
AGACTTCAGCGGTATAGACT+GGG | - | Chr4:55543285-55543304 | None:intergenic | 45.0% | |
AGTATCCGACGGGAAAATTG+AGG | + | Chr4:55543048-55543067 | MsG0480021233.01.T01:CDS | 45.0% | |
CAAAACTACAGCGTCTACAC+CGG | - | Chr4:55544268-55544287 | None:intergenic | 45.0% | |
CACTGTGTGACTCAACAAGT+TGG | - | Chr4:55542397-55542416 | None:intergenic | 45.0% | |
CCAACACTAGTGAGTAACAG+TGG | - | Chr4:55544426-55544445 | None:intergenic | 45.0% | |
CCACTGTTACTCACTAGTGT+TGG | + | Chr4:55544423-55544442 | MsG0480021233.01.T01:CDS | 45.0% | |
CTAATTGCAACCATAGCCGT+TGG | + | Chr4:55544339-55544358 | MsG0480021233.01.T01:CDS | 45.0% | |
CTCGTAATGAGAGGTCGTTT+AGG | + | Chr4:55543919-55543938 | MsG0480021233.01.T01:CDS | 45.0% | |
CTTTCTCACTTCTTTCCCAG+AGG | + | Chr4:55543324-55543343 | MsG0480021233.01.T01:CDS | 45.0% | |
GCAACTTTCTCAATTGGTGC+AGG | + | Chr4:55544561-55544580 | MsG0480021233.01.T01:CDS | 45.0% | |
GCAATCTTCAGGTATTCCAG+CGG | - | Chr4:55544112-55544131 | None:intergenic | 45.0% | |
GTAAGTCTTCCCACATGGTA+TGG | - | Chr4:55542476-55542495 | None:intergenic | 45.0% | |
TAAGGCTCCGGCAAAGAAAA+TGG | - | Chr4:55543176-55543195 | None:intergenic | 45.0% | |
TACCATGTGGGAAGACTTAC+TGG | + | Chr4:55542476-55542495 | MsG0480021233.01.T01:five_prime_UTR | 45.0% | |
TGGAGAATGATGCTTGGAGT+AGG | + | Chr4:55543835-55543854 | MsG0480021233.01.T01:CDS | 45.0% | |
TGGTGAATAGGGTCACTAGT+GGG | + | Chr4:55544658-55544677 | MsG0480021233.01.T01:CDS | 45.0% | |
TGGTGAGAAACCCATGAGTA+AGG | - | Chr4:55543194-55543213 | None:intergenic | 45.0% | |
! | CAAGACCTCAATTTTCCCGT+CGG | - | Chr4:55543056-55543075 | None:intergenic | 45.0% |
! | CTGTTACTCACTAGTGTTGG+TGG | + | Chr4:55544426-55544445 | MsG0480021233.01.T01:CDS | 45.0% |
! | GAGACCTTAAAGTATCCGAC+GGG | + | Chr4:55543038-55543057 | MsG0480021233.01.T01:CDS | 45.0% |
! | TCCAGCGGCTTGTTTAATCT+CGG | - | Chr4:55544097-55544116 | None:intergenic | 45.0% |
!! | ACTCACTAGTGTTGGTGGTA+TGG | + | Chr4:55544431-55544450 | MsG0480021233.01.T01:CDS | 45.0% |
!! | CTCATTGGTTCATGTCTTGC+CGG | + | Chr4:55543100-55543119 | MsG0480021233.01.T01:CDS | 45.0% |
!! | CTTGTGGTGTTGTGGTGAAT+AGG | + | Chr4:55544646-55544665 | MsG0480021233.01.T01:CDS | 45.0% |
!! | GAGGTATTGCTACAATTGGG+TGG | + | Chr4:55544748-55544767 | MsG0480021233.01.T01:CDS | 45.0% |
!!! | ATAAAAAAAAAGTAAATTTT+AGG | + | Chr4:55543400-55543419 | MsG0480021233.01.T01:intron | 5.0% |
ACAGTGGACGACGACCATAT+CGG | - | Chr4:55544410-55544429 | None:intergenic | 50.0% | |
AGAAGTGAGAAAGCCACGAG+AGG | - | Chr4:55543317-55543336 | None:intergenic | 50.0% | |
ATATGACGAACTGCGGGTGT+AGG | - | Chr4:55544204-55544223 | None:intergenic | 50.0% | |
CCAACGGCTAGGATTACTGA+AGG | - | Chr4:55543868-55543887 | None:intergenic | 50.0% | |
CCTTCAGTAATCCTAGCCGT+TGG | + | Chr4:55543865-55543884 | MsG0480021233.01.T01:CDS | 50.0% | |
CGACAAAACGGCCAAACATG+AGG | - | Chr4:55543228-55543247 | None:intergenic | 50.0% | |
CGTTACACCATCGTGTTTGC+CGG | + | Chr4:55543148-55543167 | MsG0480021233.01.T01:CDS | 50.0% | |
GAAACCCATGAGTAAGGCTC+CGG | - | Chr4:55543188-55543207 | None:intergenic | 50.0% | |
GACCAGTAAGTCTTCCCACA+TGG | - | Chr4:55542481-55542500 | None:intergenic | 50.0% | |
GACTTCAGCGGTATAGACTG+GGG | - | Chr4:55543284-55543303 | None:intergenic | 50.0% | |
GAGACTTCAGCGGTATAGAC+TGG | - | Chr4:55543286-55543305 | None:intergenic | 50.0% | |
GCTAGTAGCTCTCTCAAGGT+TGG | + | Chr4:55542142-55542161 | MsG0480021233.01.T01:five_prime_UTR | 50.0% | |
GGTAGCTAGTAGCTCTCTCA+AGG | + | Chr4:55542138-55542157 | MsG0480021233.01.T01:five_prime_UTR | 50.0% | |
GGTGAATAGGGTCACTAGTG+GGG | + | Chr4:55544659-55544678 | MsG0480021233.01.T01:CDS | 50.0% | |
GTAACGACGACCAATCCAGT+CGG | - | Chr4:55543134-55543153 | None:intergenic | 50.0% | |
GTAGTGTGTGTGTGTGTGAG+AGG | + | Chr4:55542589-55542608 | MsG0480021233.01.T01:five_prime_UTR | 50.0% | |
GTGGTGAATAGGGTCACTAG+TGG | + | Chr4:55544657-55544676 | MsG0480021233.01.T01:CDS | 50.0% | |
TGGCATGGCTAAGACTCCAA+CGG | - | Chr4:55543884-55543903 | None:intergenic | 50.0% | |
TTTGCCGGAGCCTTACTCAT+GGG | + | Chr4:55543181-55543200 | MsG0480021233.01.T01:CDS | 50.0% | |
!! | ATGTTTGGCCGTTTTGTCGC+CGG | + | Chr4:55543229-55543248 | MsG0480021233.01.T01:CDS | 50.0% |
AACTGTCCTCGTGGACCCTT+TGG | - | Chr4:55542309-55542328 | None:intergenic | 55.0% | |
AATCCAGTCGGAGGTTCTGC+CGG | - | Chr4:55543122-55543141 | None:intergenic | 55.0% | |
AGAAAGCCACGAGAGGAAGC+GGG | - | Chr4:55543310-55543329 | None:intergenic | 55.0% | |
AGCATAGCCGATGCCAACTC+CGG | - | Chr4:55543251-55543270 | None:intergenic | 55.0% | |
CCAAGGAAGAGGCTCAGCTA+AGG | + | Chr4:55543977-55543996 | MsG0480021233.01.T01:CDS | 55.0% | |
CCACGATGGCTCGTAATGAG+AGG | + | Chr4:55543910-55543929 | MsG0480021233.01.T01:CDS | 55.0% | |
CCTCTCATTACGAGCCATCG+TGG | - | Chr4:55543913-55543932 | None:intergenic | 55.0% | |
CCTTAGCTGAGCCTCTTCCT+TGG | - | Chr4:55543980-55543999 | None:intergenic | 55.0% | |
CCTTGTGCCCTCAACCTCAA+AGG | - | Chr4:55544621-55544640 | None:intergenic | 55.0% | |
CTTTGCCGGAGCCTTACTCA+TGG | + | Chr4:55543180-55543199 | MsG0480021233.01.T01:CDS | 55.0% | |
GAGAAAGCCACGAGAGGAAG+CGG | - | Chr4:55543311-55543330 | None:intergenic | 55.0% | |
GCCGAGATTAAACAAGCCGC+TGG | + | Chr4:55544093-55544112 | MsG0480021233.01.T01:CDS | 55.0% | |
GCGAATGCAAACTGTCCTCG+TGG | - | Chr4:55542318-55542337 | None:intergenic | 55.0% | |
TCCGGCAAAGAAAATGGCGC+CGG | - | Chr4:55543170-55543189 | None:intergenic | 55.0% | |
TGCCAACTCCGGCGACAAAA+CGG | - | Chr4:55543240-55543259 | None:intergenic | 55.0% | |
TGGCTAAGACTCCAACGGCT+AGG | - | Chr4:55543879-55543898 | None:intergenic | 55.0% | |
TGGTGCAGGACCCATCACAT+GGG | + | Chr4:55544575-55544594 | MsG0480021233.01.T01:CDS | 55.0% | |
TTGGTGCAGGACCCATCACA+TGG | + | Chr4:55544574-55544593 | MsG0480021233.01.T01:CDS | 55.0% | |
TTTGTCGCCGGAGTTGGCAT+CGG | + | Chr4:55543241-55543260 | MsG0480021233.01.T01:CDS | 55.0% | |
! | AGGTGCAGCTTGTGGTGTTG+TGG | + | Chr4:55544638-55544657 | MsG0480021233.01.T01:CDS | 55.0% |
!! | CCTTTGAGGTTGAGGGCACA+AGG | + | Chr4:55544618-55544637 | MsG0480021233.01.T01:CDS | 55.0% |
AAAGCCACGAGAGGAAGCGG+GGG | - | Chr4:55543308-55543327 | None:intergenic | 60.0% | |
ACGACGACCAATCCAGTCGG+AGG | - | Chr4:55543131-55543150 | None:intergenic | 60.0% | |
ACGAGCCATCGTGGTGACTC+TGG | - | Chr4:55543904-55543923 | None:intergenic | 60.0% | |
AGGGCACAAGGTGCAGCTTG+TGG | + | Chr4:55544630-55544649 | MsG0480021233.01.T01:CDS | 60.0% | |
CCATCGTGGTGACTCTGGCA+TGG | - | Chr4:55543899-55543918 | None:intergenic | 60.0% | |
CCATGCCAGAGTCACCACGA+TGG | + | Chr4:55543896-55543915 | MsG0480021233.01.T01:CDS | 60.0% | |
GAAAGCCACGAGAGGAAGCG+GGG | - | Chr4:55543309-55543328 | None:intergenic | 60.0% | |
GGCAGAACCTCCGACTGGAT+TGG | + | Chr4:55543121-55543140 | MsG0480021233.01.T01:CDS | 60.0% | |
GTTCCACCAAAGGGTCCACG+AGG | + | Chr4:55542300-55542319 | MsG0480021233.01.T01:five_prime_UTR | 60.0% | |
TGTCCTCGTGGACCCTTTGG+TGG | - | Chr4:55542306-55542325 | None:intergenic | 60.0% | |
!! | AATGGCGCCGGCAAACACGA+TGG | - | Chr4:55543158-55543177 | None:intergenic | 60.0% |
!! | GCCGGCGCCATTTTCTTTGC+CGG | + | Chr4:55543166-55543185 | MsG0480021233.01.T01:CDS | 60.0% |
GGAAGCGGGGGAGACTTCAG+CGG | - | Chr4:55543296-55543315 | None:intergenic | 65.0% | |
TTGCCGGCAGAACCTCCGAC+TGG | + | Chr4:55543116-55543135 | MsG0480021233.01.T01:CDS | 65.0% | |
!! | GGCCGTTTTGTCGCCGGAGT+TGG | + | Chr4:55543235-55543254 | MsG0480021233.01.T01:CDS | 65.0% |
GTCTCCCCCGCTTCCTCTCG+TGG | + | Chr4:55543301-55543320 | MsG0480021233.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 55542028 | 55545095 | 55542028 | ID=MsG0480021233.01;Name=MsG0480021233.01 |
Chr4 | mRNA | 55542028 | 55545095 | 55542028 | ID=MsG0480021233.01.T01;Parent=MsG0480021233.01;Name=MsG0480021233.01.T01;_AED=0.13;_eAED=0.13;_QI=563|1|1|1|0.75|0.6|5|163|522 |
Chr4 | exon | 55542028 | 55542091 | 55542028 | ID=MsG0480021233.01.T01:exon:6287;Parent=MsG0480021233.01.T01 |
Chr4 | exon | 55542132 | 55542769 | 55542132 | ID=MsG0480021233.01.T01:exon:6288;Parent=MsG0480021233.01.T01 |
Chr4 | exon | 55542999 | 55543345 | 55542999 | ID=MsG0480021233.01.T01:exon:6289;Parent=MsG0480021233.01.T01 |
Chr4 | exon | 55543760 | 55543998 | 55543760 | ID=MsG0480021233.01.T01:exon:6290;Parent=MsG0480021233.01.T01 |
Chr4 | exon | 55544089 | 55545095 | 55544089 | ID=MsG0480021233.01.T01:exon:6291;Parent=MsG0480021233.01.T01 |
Chr4 | five_prime_UTR | 55542028 | 55542091 | 55542028 | ID=MsG0480021233.01.T01:five_prime_utr;Parent=MsG0480021233.01.T01 |
Chr4 | five_prime_UTR | 55542132 | 55542630 | 55542132 | ID=MsG0480021233.01.T01:five_prime_utr;Parent=MsG0480021233.01.T01 |
Chr4 | CDS | 55542631 | 55542769 | 55542631 | ID=MsG0480021233.01.T01:cds;Parent=MsG0480021233.01.T01 |
Chr4 | CDS | 55542999 | 55543345 | 55542999 | ID=MsG0480021233.01.T01:cds;Parent=MsG0480021233.01.T01 |
Chr4 | CDS | 55543760 | 55543998 | 55543760 | ID=MsG0480021233.01.T01:cds;Parent=MsG0480021233.01.T01 |
Chr4 | CDS | 55544089 | 55544932 | 55544089 | ID=MsG0480021233.01.T01:cds;Parent=MsG0480021233.01.T01 |
Chr4 | three_prime_UTR | 55544933 | 55545095 | 55544933 | ID=MsG0480021233.01.T01:three_prime_utr;Parent=MsG0480021233.01.T01 |
Gene Sequence |
Protein sequence |