AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021385.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021385.01.T01 MTR_4g072220 91.398 93 8 0 1 93 1 93 7.65e-59 175
MsG0480021385.01.T01 MTR_4g072300 85.714 91 13 0 1 91 1 91 2.93e-55 166
MsG0480021385.01.T01 MTR_4g072890 85.714 91 13 0 1 91 1 91 1.00e-54 164
MsG0480021385.01.T01 MTR_4g072260 83.871 93 15 0 1 93 1 93 2.17e-54 164
MsG0480021385.01.T01 MTR_4g072240 84.615 91 14 0 1 91 1 91 3.46e-54 163
MsG0480021385.01.T01 MTR_4g072870 80.220 91 18 0 1 91 1 91 5.13e-50 153
MsG0480021385.01.T01 MTR_4g072280 82.667 75 13 0 1 75 1 75 1.71e-42 133
MsG0480021385.01.T01 MTR_4g072530 67.033 91 29 1 1 91 1 90 1.28e-41 131
MsG0480021385.01.T01 MTR_4g072500 66.667 93 30 1 1 93 1 92 2.43e-41 131
MsG0480021385.01.T01 MTR_4g072310 63.441 93 34 0 1 93 1 93 1.02e-40 129
MsG0480021385.01.T01 MTR_4g072640 66.304 92 30 1 1 92 1 91 1.39e-40 129
MsG0480021385.01.T01 MTR_4g072830 67.033 91 27 1 1 91 1 88 4.63e-40 127
MsG0480021385.01.T01 MTR_3g110038 67.742 93 29 1 1 93 1 92 9.17e-40 127
MsG0480021385.01.T01 MTR_3g084150 65.591 93 31 1 1 93 1 92 1.08e-39 127
MsG0480021385.01.T01 MTR_3g084240 66.667 93 30 1 1 93 1 92 1.25e-39 127
MsG0480021385.01.T01 MTR_4g072370 64.835 91 29 1 1 91 1 88 2.15e-39 126
MsG0480021385.01.T01 MTR_3g084250 66.667 93 30 1 1 93 1 92 3.73e-39 125
MsG0480021385.01.T01 MTR_3g084170 66.667 93 30 1 1 93 1 92 5.08e-39 125
MsG0480021385.01.T01 MTR_4g072570 64.516 93 32 1 1 93 1 92 7.05e-39 125
MsG0480021385.01.T01 MTR_3g084180 64.516 93 32 1 1 93 1 92 8.88e-39 124
MsG0480021385.01.T01 MTR_3g110042 67.778 90 28 1 1 90 1 89 1.02e-38 124
MsG0480021385.01.T01 MTR_4g072330 64.835 91 29 1 1 91 1 88 1.18e-38 124
MsG0480021385.01.T01 MTR_4g072880 61.290 93 36 0 1 93 1 93 2.17e-38 124
MsG0480021385.01.T01 MTR_4g072580 64.835 91 26 1 1 91 1 85 2.48e-38 123
MsG0480021385.01.T01 MTR_4g072230 62.366 93 33 1 1 93 1 91 3.01e-38 123
MsG0480021385.01.T01 MTR_8g461410 63.441 93 33 1 1 93 1 92 3.65e-38 123
MsG0480021385.01.T01 MTR_3g110032 63.441 93 34 0 1 93 1 93 3.93e-38 123
MsG0480021385.01.T01 MTR_3g117630 63.333 90 33 0 4 93 3 92 4.50e-38 122
MsG0480021385.01.T01 MTR_4g072250 64.835 91 31 1 1 91 1 90 4.86e-38 122
MsG0480021385.01.T01 MTR_4g050700 63.441 93 34 0 1 93 1 93 9.88e-38 122
MsG0480021385.01.T01 MTR_2g012410 63.441 93 34 0 1 93 1 93 9.88e-38 122
MsG0480021385.01.T01 MTR_3g084220 64.516 93 32 1 1 93 1 92 2.31e-37 121
MsG0480021385.01.T01 MTR_4g072820 66.667 90 24 1 1 90 1 84 5.92e-37 120
MsG0480021385.01.T01 MTR_4g072740 64.835 91 26 1 1 91 1 85 9.85e-37 119
MsG0480021385.01.T01 MTR_4g072850 65.957 94 31 1 1 93 1 94 1.46e-36 119
MsG0480021385.01.T01 MTR_3g084260 62.637 91 34 0 1 91 1 91 1.69e-36 119
MsG0480021385.01.T01 MTR_4g072600 63.736 91 27 1 1 91 1 85 1.93e-36 118
MsG0480021385.01.T01 MTR_4g072630 64.835 91 27 1 1 91 1 86 1.94e-36 118
MsG0480021385.01.T01 MTR_4g072480 61.290 93 35 1 1 93 1 92 2.60e-36 118
MsG0480021385.01.T01 MTR_4g072860 60.215 93 37 0 1 93 1 93 6.36e-36 117
MsG0480021385.01.T01 MTR_4g072270 59.140 93 38 0 1 93 1 93 1.19e-35 117
MsG0480021385.01.T01 MTR_8g461420 67.742 93 29 1 1 93 1 92 1.71e-35 116
MsG0480021385.01.T01 MTR_4g072490 62.637 91 28 1 1 91 1 85 1.76e-35 116
MsG0480021385.01.T01 MTR_3g084190 68.817 93 28 1 1 93 1 92 1.89e-35 116
MsG0480021385.01.T01 MTR_3g084210 67.742 93 29 1 1 93 1 92 3.81e-35 115
MsG0480021385.01.T01 MTR_4g072730 58.242 91 37 1 1 91 1 90 5.72e-35 115
MsG0480021385.01.T01 MTR_4g072610 69.737 76 23 0 16 91 9 84 5.99e-35 114
MsG0480021385.01.T01 MTR_4g072620 58.065 93 38 1 1 93 1 92 7.78e-35 114
MsG0480021385.01.T01 MTR_3g084160 66.667 93 30 1 1 93 1 92 9.37e-35 114
MsG0480021385.01.T01 MTR_3g084230 66.667 93 30 1 1 93 1 92 9.58e-35 114
MsG0480021385.01.T01 MTR_4g072680 59.140 93 37 1 1 93 1 92 1.09e-34 114
MsG0480021385.01.T01 MTR_4g072470 61.538 91 29 1 1 91 1 85 1.20e-34 114
MsG0480021385.01.T01 MTR_3g110045 72.222 72 20 0 22 93 80 151 5.66e-34 114
MsG0480021385.01.T01 MTR_4g072940 70.833 72 21 0 22 93 53 124 1.26e-33 112
MsG0480021385.01.T01 MTR_4g072650 61.538 91 28 1 1 91 1 84 1.30e-33 111
MsG0480021385.01.T01 MTR_4g072460 58.065 93 38 1 1 93 1 92 1.97e-33 111
MsG0480021385.01.T01 MTR_4g072540 60.440 91 31 1 1 91 1 86 3.03e-33 110
MsG0480021385.01.T01 MTR_4g072465 59.341 91 32 1 1 91 1 86 7.05e-33 109
MsG0480021385.01.T01 MTR_4g072510 60.440 91 31 1 1 91 1 86 1.38e-32 108
MsG0480021385.01.T01 MTR_4g072670 59.341 91 32 1 1 91 1 86 1.44e-32 108
MsG0480021385.01.T01 MTR_4g072660 56.989 93 34 1 1 93 1 87 5.45e-32 107
MsG0480021385.01.T01 MTR_4g072720 59.341 91 32 1 1 91 1 86 5.91e-32 107
MsG0480021385.01.T01 MTR_4g072590 64.634 82 29 0 10 91 4 85 6.06e-31 104
MsG0480021385.01.T01 MTR_5g008350 63.750 80 23 1 1 80 1 74 1.16e-30 103
MsG0480021385.01.T01 MTR_4g072380 61.364 88 29 1 1 88 1 83 1.21e-30 103
MsG0480021385.01.T01 MTR_5g008360 63.158 76 28 0 18 93 8 83 1.52e-30 103
MsG0480021385.01.T01 MTR_4g072690 64.634 82 29 0 10 91 4 85 5.99e-30 102
MsG0480021385.01.T01 MTR_4g072450 64.634 82 29 0 10 91 4 85 6.19e-30 102
MsG0480021385.01.T01 MTR_4g072910 65.672 67 23 0 25 91 34 100 7.25e-30 102
MsG0480021385.01.T01 MTR_3g084200 67.123 73 23 1 1 73 1 72 8.34e-30 102
MsG0480021385.01.T01 MTR_5g008370 70.149 67 20 0 25 91 24 90 8.43e-30 103
MsG0480021385.01.T01 MTR_4g072770 69.697 66 20 0 26 91 15 80 1.29e-29 101
MsG0480021385.01.T01 MTR_4g072550 63.014 73 27 0 21 93 31 103 6.85e-29 100
MsG0480021385.01.T01 MTR_4g072980 52.174 92 42 2 1 90 1 92 1.05e-28 99.4
MsG0480021385.01.T01 MTR_3g117640 65.672 67 22 1 25 90 33 99 1.25e-27 97.1
MsG0480021385.01.T01 MTR_4g072560 61.194 67 25 1 25 90 31 97 1.67e-26 94.0
MsG0480021385.01.T01 MTR_4g072750 64.000 75 24 2 1 73 1 74 5.37e-26 92.0
MsG0480021385.01.T01 MTR_4g072930 52.439 82 35 1 14 91 29 110 8.18e-26 92.4
MsG0480021385.01.T01 MTR_3g110035 62.121 66 25 0 28 93 73 138 8.51e-24 88.2
MsG0480021385.01.T01 MTR_4g072290 48.387 93 34 1 1 93 1 79 1.24e-23 85.9
MsG0480021385.01.T01 MTR_3g113310 53.731 67 30 1 24 90 40 105 1.15e-21 82.0
MsG0480021385.01.T01 MTR_3g117610 56.923 65 27 1 24 88 43 106 2.40e-21 81.3
MsG0480021385.01.T01 MTR_6g077850 49.254 67 34 0 25 91 33 99 2.48e-20 78.2
MsG0480021385.01.T01 MTR_4g072190 48.193 83 39 2 8 90 21 99 3.44e-20 77.8
MsG0480021385.01.T01 MTR_5g021820 48.810 84 39 3 10 90 21 103 8.02e-20 77.0
MsG0480021385.01.T01 MTR_8g076040 48.810 84 39 2 8 88 20 102 2.53e-19 75.9
MsG0480021385.01.T01 MTR_4g072160 47.500 80 41 1 4 83 15 93 3.27e-19 76.6
MsG0480021385.01.T01 MTR_4g124750 51.316 76 35 2 4 78 46 120 4.27e-19 76.6
MsG0480021385.01.T01 MTR_4g025830 51.389 72 31 2 23 91 76 146 7.22e-19 76.3
MsG0480021385.01.T01 MTR_2g043960 62.963 54 19 1 25 78 75 127 7.08e-18 73.6
MsG0480021385.01.T01 MTR_0388s0020 43.182 88 45 3 7 91 57 142 4.40e-17 71.2
MsG0480021385.01.T01 MTR_8g461400 44.086 93 25 2 1 93 1 66 1.43e-16 67.8
MsG0480021385.01.T01 MTR_1g094750 51.613 62 29 1 25 86 49 109 3.08e-16 68.2
MsG0480021385.01.T01 MTR_7g118010 53.968 63 26 2 26 86 23 84 6.68e-16 67.0
MsG0480021385.01.T01 MTR_3g092220 44.156 77 40 2 9 83 16 91 7.31e-16 67.4
MsG0480021385.01.T01 MTR_1g009150 50.746 67 32 1 17 83 62 127 1.23e-15 68.2
MsG0480021385.01.T01 MTR_1g024085 46.753 77 29 2 4 80 26 90 1.81e-15 67.0
MsG0480021385.01.T01 MTR_4g005310 45.455 77 35 2 17 86 47 123 2.38e-15 67.0
MsG0480021385.01.T01 MTR_7g101740 48.438 64 32 1 25 88 39 101 4.11e-15 65.5
MsG0480021385.01.T01 MTR_1g061570 55.357 56 24 1 25 80 18 72 4.81e-15 65.5
MsG0480021385.01.T01 MTR_8g026730 47.059 68 33 2 26 91 27 93 1.06e-14 64.3
MsG0480021385.01.T01 MTR_3g097120 42.683 82 38 2 19 92 2 82 1.14e-14 63.9
MsG0480021385.01.T01 MTR_1g063950 45.161 62 33 1 25 86 47 107 2.48e-14 63.5
MsG0480021385.01.T01 MTR_4g072840 45.556 90 18 3 1 90 1 59 3.18e-14 61.6
MsG0480021385.01.T01 MTR_4g005320 53.704 54 24 1 26 79 70 122 1.08e-13 62.8
MsG0480021385.01.T01 MTR_7g405740 44.118 68 37 1 12 79 53 119 2.57e-13 62.0
MsG0480021385.01.T01 MTR_8g461210 47.458 59 30 1 25 83 34 91 4.66e-13 60.1
MsG0480021385.01.T01 MTR_3g109160 49.296 71 35 1 8 78 51 120 6.00e-13 61.2
MsG0480021385.01.T01 MTR_2g066830 39.130 69 40 2 10 78 43 109 6.72e-12 57.8
MsG0480021385.01.T01 MTR_1g059770 44.828 58 31 1 26 83 49 105 8.89e-12 57.4
MsG0480021385.01.T01 MTR_8g094980 40.741 81 34 2 25 92 2 81 1.07e-11 56.6
MsG0480021385.01.T01 MTR_7g104950 45.455 55 29 1 29 83 53 106 1.60e-11 56.6
MsG0480021385.01.T01 MTR_3g105900 66.667 36 12 0 25 60 1171 1206 1.67e-11 58.9
MsG0480021385.01.T01 MTR_8g101520 45.312 64 34 1 27 90 51 113 2.43e-11 56.6
MsG0480021385.01.T01 MTR_8g096440 44.776 67 34 2 13 79 34 97 3.74e-11 55.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021385.01.T01 AT4G38840 72.059 68 18 1 25 91 32 99 1.19e-31 107
MsG0480021385.01.T01 AT2G21210 52.632 95 41 2 1 91 1 95 2.12e-31 106
MsG0480021385.01.T01 AT2G21210 52.632 95 41 2 1 91 68 162 1.31e-30 106
MsG0480021385.01.T01 AT5G18080 60.000 75 29 1 17 90 15 89 3.20e-29 100
MsG0480021385.01.T01 AT5G18020 57.333 75 31 1 17 90 15 89 7.49e-29 99.8
MsG0480021385.01.T01 AT5G18010 57.333 75 31 1 17 90 15 89 8.13e-29 99.8
MsG0480021385.01.T01 AT3G03820 56.522 92 34 2 2 90 6 94 1.16e-28 99.4
MsG0480021385.01.T01 AT5G18060 66.154 65 21 1 27 90 25 89 5.17e-28 97.4
MsG0480021385.01.T01 AT5G18050 63.636 66 23 1 26 90 24 89 6.95e-28 97.1
MsG0480021385.01.T01 AT5G18030 63.636 66 23 1 26 90 22 87 2.24e-27 95.9
MsG0480021385.01.T01 AT2G21200 59.722 72 28 1 20 90 15 86 4.09e-27 95.1
MsG0480021385.01.T01 AT4G34770 66.667 69 21 1 25 91 34 102 5.74e-27 95.5
MsG0480021385.01.T01 AT4G38850 60.294 68 24 1 26 90 21 88 1.23e-26 94.0
MsG0480021385.01.T01 AT4G38825 61.194 67 25 1 25 90 22 88 1.93e-26 93.6
MsG0480021385.01.T01 AT4G34800 51.685 89 35 2 1 86 1 84 3.32e-26 93.2
MsG0480021385.01.T01 AT3G03840 59.155 71 27 1 22 90 23 93 6.80e-26 92.4
MsG0480021385.01.T01 AT4G34810 62.857 70 21 2 26 90 48 117 1.14e-25 92.4
MsG0480021385.01.T01 AT3G03850 54.023 87 33 2 6 90 10 91 3.87e-25 90.5
MsG0480021385.01.T01 AT4G34790 66.667 63 19 1 26 86 39 101 1.26e-24 89.4
MsG0480021385.01.T01 AT4G13790 49.315 73 35 1 20 90 19 91 9.47e-24 86.7
MsG0480021385.01.T01 AT3G03830 56.522 69 27 1 25 90 23 91 3.15e-23 85.5
MsG0480021385.01.T01 AT4G38860 51.190 84 38 1 8 88 19 102 1.35e-22 84.3
MsG0480021385.01.T01 AT4G34780 57.143 70 27 2 25 91 27 96 2.53e-22 83.6
MsG0480021385.01.T01 AT1G75580 48.889 90 38 2 8 90 19 107 8.76e-21 79.7
MsG0480021385.01.T01 AT2G21220 47.674 86 41 2 8 90 19 103 1.27e-20 79.3
MsG0480021385.01.T01 AT4G34760 52.239 67 31 1 24 90 41 106 1.79e-19 76.3
MsG0480021385.01.T01 AT1G19830 53.731 67 30 1 24 90 46 111 1.58e-18 74.3
MsG0480021385.01.T01 AT3G43120 61.111 54 20 1 25 78 78 130 3.34e-18 74.7
MsG0480021385.01.T01 AT4G36110 48.780 82 40 2 8 88 21 101 4.34e-18 72.8
MsG0480021385.01.T01 AT5G66260 47.059 85 43 2 8 91 15 98 2.28e-17 70.9
MsG0480021385.01.T01 AT5G20810 62.963 54 19 1 25 78 78 130 2.42e-17 72.4
MsG0480021385.01.T01 AT2G16580 52.308 65 30 1 24 88 42 105 3.44e-17 70.5
MsG0480021385.01.T01 AT1G75590 52.113 71 29 2 13 83 33 98 4.06e-17 71.6
MsG0480021385.01.T01 AT5G20810 62.963 54 19 1 25 78 78 130 5.40e-17 72.0
MsG0480021385.01.T01 AT2G18010 50.000 72 35 1 17 88 39 109 5.44e-17 70.1
MsG0480021385.01.T01 AT2G45210 42.105 76 40 2 19 91 72 146 1.67e-16 70.1
MsG0480021385.01.T01 AT5G10990 47.297 74 34 2 10 83 29 97 1.10e-15 67.8
MsG0480021385.01.T01 AT3G51200 52.381 63 28 2 25 86 38 99 1.12e-15 66.6
MsG0480021385.01.T01 AT1G19840 48.649 74 33 2 10 83 29 97 1.14e-15 67.8
MsG0480021385.01.T01 AT2G37030 48.387 62 31 1 25 86 48 108 1.63e-15 66.6
MsG0480021385.01.T01 AT3G60690 47.059 68 32 2 26 90 88 154 1.92e-15 67.8
MsG0480021385.01.T01 AT3G20220 54.237 59 25 2 26 83 47 104 1.02e-14 64.7
MsG0480021385.01.T01 AT4G00880 57.377 61 23 2 25 83 27 86 1.33e-14 64.3
MsG0480021385.01.T01 AT4G12410 47.826 69 32 2 26 91 76 143 1.41e-14 65.1
MsG0480021385.01.T01 AT4G34750 45.161 62 33 1 25 86 36 96 1.52e-14 65.1
MsG0480021385.01.T01 AT4G34750 45.161 62 33 1 25 86 36 96 1.52e-14 65.1
MsG0480021385.01.T01 AT2G46690 47.826 69 32 2 18 83 16 83 4.31e-14 63.2
MsG0480021385.01.T01 AT3G53250 42.466 73 37 2 14 86 41 108 6.30e-14 62.8
MsG0480021385.01.T01 AT3G53250 42.466 73 37 2 14 86 72 139 8.36e-14 63.2
MsG0480021385.01.T01 AT4G22620 39.759 83 46 2 12 91 65 146 1.64e-13 62.4
MsG0480021385.01.T01 AT3G61900 52.632 57 23 2 25 78 29 84 1.98e-13 61.6
MsG0480021385.01.T01 AT5G53590 41.096 73 37 2 25 92 45 116 6.20e-13 60.5
MsG0480021385.01.T01 AT4G09530 41.096 73 40 2 17 86 19 91 1.43e-12 58.5
MsG0480021385.01.T01 AT3G12830 46.875 64 29 2 15 78 43 101 4.02e-12 58.2
MsG0480021385.01.T01 AT4G31320 47.619 63 32 1 21 83 75 136 6.79e-12 58.9
MsG0480021385.01.T01 AT1G56150 42.857 63 35 1 16 78 28 89 9.06e-12 56.6
MsG0480021385.01.T01 AT2G24400 54.717 53 23 1 26 78 64 115 1.21e-11 57.8

Find 21 sgRNAs with CRISPR-Local

Find 24 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTAGATTCTTGTGTTT+TGG 0.227199 4:-57284151 None:intergenic
CATCAAGCAGAAGAAGAATT+TGG 0.279041 4:+57284282 MsG0480021385.01.T01:CDS
TGTAGTAATTCTTGAAATAA+TGG 0.319917 4:-57284261 None:intergenic
ATTTGGATATGTTCATCCTA+TGG 0.395672 4:+57284299 MsG0480021385.01.T01:CDS
GGTTGGTTCAAGTATGATAC+TGG 0.408482 4:-57284240 None:intergenic
TAGACTGCAAGATAGCCTTT+TGG 0.442040 4:-57284186 None:intergenic
GTAATTCTTGAAATAATGGT+TGG 0.504955 4:-57284257 None:intergenic
AAGAATTCTCCCTCGCTACA+AGG 0.507613 4:-57284336 None:intergenic
TTTGGATATGTTCATCCTAT+GGG 0.518304 4:+57284300 MsG0480021385.01.T01:CDS
GGCTATCTTGCAGTCTACGT+TGG 0.536328 4:+57284192 MsG0480021385.01.T01:CDS
AAGGGATTCGAAGTCCCAAA+AGG 0.563694 4:+57284171 MsG0480021385.01.T01:CDS
GGATATGTTCATCCTATGGG+TGG 0.573500 4:+57284303 MsG0480021385.01.T01:CDS
CTCACAATTCCTTGTAGCGA+GGG 0.580910 4:+57284327 MsG0480021385.01.T01:CDS
TTCTGATAAGCTTTGCTATG+CGG 0.610874 4:-57284116 None:intergenic
TCTACGTTGGAGATCAAATG+AGG 0.626265 4:+57284205 MsG0480021385.01.T01:CDS
CAAAACACAAGAATCTACCA+AGG 0.648832 4:+57284152 MsG0480021385.01.T01:CDS
TCTCACAATTCCTTGTAGCG+AGG 0.655893 4:+57284326 MsG0480021385.01.T01:CDS
GGAATTGTGAGACCACCCAT+AGG 0.670166 4:-57284315 None:intergenic
AAAACACAAGAATCTACCAA+GGG 0.683751 4:+57284153 MsG0480021385.01.T01:CDS
ACGTTGGAGATCAAATGAGG+CGG 0.704375 4:+57284208 MsG0480021385.01.T01:CDS
GCTCACTCAAGCGAGAACTG+AGG 0.736964 4:-57284362 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTAGTAATTCTTGAAATAA+TGG - Chr4:57284264-57284283 None:intergenic 20.0%
! GTAATTCTTGAAATAATGGT+TGG - Chr4:57284260-57284279 None:intergenic 25.0%
AAAACACAAGAATCTACCAA+GGG + Chr4:57284153-57284172 MsG0480021385.01.T01:CDS 30.0%
ATTTGGATATGTTCATCCTA+TGG + Chr4:57284299-57284318 MsG0480021385.01.T01:CDS 30.0%
TTTGGATATGTTCATCCTAT+GGG + Chr4:57284300-57284319 MsG0480021385.01.T01:CDS 30.0%
!!! TCTTGTGTTTTGGAAAATGA+TGG - Chr4:57284144-57284163 None:intergenic 30.0%
CAAAACACAAGAATCTACCA+AGG + Chr4:57284152-57284171 MsG0480021385.01.T01:CDS 35.0%
CATCAAGCAGAAGAAGAATT+TGG + Chr4:57284282-57284301 MsG0480021385.01.T01:CDS 35.0%
! CTTGGTAGATTCTTGTGTTT+TGG - Chr4:57284154-57284173 None:intergenic 35.0%
! TTCTGATAAGCTTTGCTATG+CGG - Chr4:57284119-57284138 None:intergenic 35.0%
TCTACGTTGGAGATCAAATG+AGG + Chr4:57284205-57284224 MsG0480021385.01.T01:CDS 40.0%
! AGACTGCAAGATAGCCTTTT+GGG - Chr4:57284188-57284207 None:intergenic 40.0%
! GGTTGGTTCAAGTATGATAC+TGG - Chr4:57284243-57284262 None:intergenic 40.0%
! TAGACTGCAAGATAGCCTTT+TGG - Chr4:57284189-57284208 None:intergenic 40.0%
AAGAATTCTCCCTCGCTACA+AGG - Chr4:57284339-57284358 None:intergenic 45.0%
AAGGGATTCGAAGTCCCAAA+AGG + Chr4:57284171-57284190 MsG0480021385.01.T01:CDS 45.0%
ACGTTGGAGATCAAATGAGG+CGG + Chr4:57284208-57284227 MsG0480021385.01.T01:CDS 45.0%
CTCACAATTCCTTGTAGCGA+GGG + Chr4:57284327-57284346 MsG0480021385.01.T01:CDS 45.0%
GGATATGTTCATCCTATGGG+TGG + Chr4:57284303-57284322 MsG0480021385.01.T01:CDS 45.0%
TCTCACAATTCCTTGTAGCG+AGG + Chr4:57284326-57284345 MsG0480021385.01.T01:CDS 45.0%
!!! TTTTGGGACTTCGAATCCCT+TGG - Chr4:57284172-57284191 None:intergenic 45.0%
GGAATTGTGAGACCACCCAT+AGG - Chr4:57284318-57284337 None:intergenic 50.0%
GGCTATCTTGCAGTCTACGT+TGG + Chr4:57284192-57284211 MsG0480021385.01.T01:CDS 50.0%
GCTCACTCAAGCGAGAACTG+AGG - Chr4:57284365-57284384 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 57284108 57284389 57284108 ID=MsG0480021385.01;Name=MsG0480021385.01
Chr4 mRNA 57284108 57284389 57284108 ID=MsG0480021385.01.T01;Parent=MsG0480021385.01;Name=MsG0480021385.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|93
Chr4 exon 57284108 57284389 57284108 ID=MsG0480021385.01.T01:exon:8324;Parent=MsG0480021385.01.T01
Chr4 CDS 57284108 57284389 57284108 ID=MsG0480021385.01.T01:cds;Parent=MsG0480021385.01.T01
Gene Sequence

>MsG0480021385.01.T01

ATGGGTTTCCGCATAGCAAAGCTTATCAGAATGCCATCATTTTCCAAAACACAAGAATCTACCAAGGGATTCGAAGTCCCAAAAGGCTATCTTGCAGTCTACGTTGGAGATCAAATGAGGCGGTTTGTGATTCCAGTATCATACTTGAACCAACCATTATTTCAAGAATTACTACATCAAGCAGAAGAAGAATTTGGATATGTTCATCCTATGGGTGGTCTCACAATTCCTTGTAGCGAGGGAGAATTCTTAAACCTCAGTTCTCGCTTGAGTGAGCTGTAA
Protein sequence

>MsG0480021385.01.T01

MGFRIAKLIRMPSFSKTQESTKGFEVPKGYLAVYVGDQMRRFVIPVSYLNQPLFQELLHQAEEEFGYVHPMGGLTIPCSEGEFLNLSSRLSEL*