Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021395.01.T01 | XP_003607180.1 | 97.683 | 259 | 6 | 0 | 1 | 259 | 1 | 259 | 0 | 532 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021395.01.T01 | Q8GTS2 | 61.303 | 261 | 81 | 6 | 1 | 260 | 1 | 242 | 2.39E-106 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021395.01.T01 | B7FIL7 | 97.683 | 259 | 6 | 0 | 1 | 259 | 1 | 259 | 0.0 | 532 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0480021395.01.T01 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380014541.01 | MsG0480021395.01 | 0.802874 | 4.561483e-49 | 2.259378e-46 |
| MsG0480021395.01 | MsG0480022444.01 | 0.872414 | 3.238177e-67 | 1.353917e-63 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021395.01.T01 | MTR_4g073100 | 97.683 | 259 | 6 | 0 | 1 | 259 | 1 | 259 | 0.0 | 532 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021395.01.T01 | AT2G16770 | 61.303 | 261 | 81 | 6 | 1 | 260 | 1 | 242 | 2.44e-107 | 311 |
| MsG0480021395.01.T01 | AT2G16770 | 61.303 | 261 | 81 | 6 | 1 | 260 | 1 | 242 | 2.44e-107 | 311 |
| MsG0480021395.01.T01 | AT4G35040 | 64.015 | 264 | 79 | 8 | 1 | 259 | 1 | 253 | 1.57e-106 | 309 |
| MsG0480021395.01.T01 | AT4G35040 | 64.015 | 264 | 79 | 8 | 1 | 259 | 1 | 253 | 1.57e-106 | 309 |
| MsG0480021395.01.T01 | AT4G35040 | 64.015 | 264 | 79 | 8 | 1 | 259 | 1 | 253 | 1.57e-106 | 309 |
| MsG0480021395.01.T01 | AT4G35040 | 64.015 | 264 | 79 | 8 | 1 | 259 | 1 | 253 | 1.57e-106 | 309 |
| MsG0480021395.01.T01 | AT3G51960 | 54.478 | 134 | 54 | 3 | 39 | 171 | 13 | 140 | 1.84e-45 | 151 |
| MsG0480021395.01.T01 | AT3G51960 | 54.478 | 134 | 54 | 3 | 39 | 171 | 52 | 179 | 4.00e-45 | 152 |
| MsG0480021395.01.T01 | AT3G51960 | 52.239 | 134 | 56 | 2 | 39 | 171 | 52 | 178 | 1.01e-43 | 148 |
Find 77 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAGGATTGAAGGGGAAAT+TGG | 0.206995 | 4:-57370268 | MsG0480021395.01.T01:CDS |
| GTGTTTGTTGGTTGATATTA+GGG | 0.255056 | 4:-57370290 | MsG0480021395.01.T01:CDS |
| CCCAACCGGTCGCTTCTTAC+TGG | 0.266035 | 4:+57370465 | None:intergenic |
| GATCCTTGAGCCCCAAATTC+TGG | 0.270466 | 4:+57370044 | None:intergenic |
| AGTGTTTGTTGGTTGATATT+AGG | 0.273430 | 4:-57370291 | MsG0480021395.01.T01:CDS |
| GTGTATGGGAGGCCAGAATT+TGG | 0.299733 | 4:-57370056 | MsG0480021395.01.T01:CDS |
| TGTATGGGAGGCCAGAATTT+GGG | 0.316343 | 4:-57370055 | MsG0480021395.01.T01:CDS |
| GTTGCAAGGGCAGGCTGCTT+TGG | 0.335855 | 4:-57370335 | MsG0480021395.01.T01:CDS |
| GTTTGAAATTCAGCCATGTT+TGG | 0.367715 | 4:+57370682 | None:intergenic |
| CTCAAGGATCTTCGTGGTTG+TGG | 0.376487 | 4:-57370031 | MsG0480021395.01.T01:CDS |
| GGAGGATTGAAGGGGAAATT+GGG | 0.382575 | 4:-57370267 | MsG0480021395.01.T01:CDS |
| ATTTCAAACAAGTGGTTCAA+TGG | 0.405614 | 4:-57370668 | MsG0480021395.01.T01:CDS |
| GTTTGAGAGTCTCCAGTGTA+TGG | 0.417641 | 4:-57370071 | MsG0480021395.01.T01:CDS |
| TGCGAGGTTGAAGTGTTTGT+TGG | 0.420725 | 4:-57370302 | MsG0480021395.01.T01:CDS |
| GCAAGGGCAGGCTGCTTTGG+AGG | 0.426440 | 4:-57370332 | MsG0480021395.01.T01:CDS |
| GGCTGCGTCGTTGGAGGATG+AGG | 0.428168 | 4:-57370398 | MsG0480021395.01.T01:CDS |
| TCATCACACTGCACATTACA+AGG | 0.429810 | 4:+57370175 | None:intergenic |
| GATCTTCGTGGTTGTGGAGG+TGG | 0.440100 | 4:-57370025 | MsG0480021395.01.T01:CDS |
| ACCGCCTCTTTATTCCCAAC+CGG | 0.455765 | 4:+57370451 | None:intergenic |
| TCAGCAGCAATCTTCCCATC+TGG | 0.456534 | 4:+57370133 | None:intergenic |
| ACATTCGCGGGTTTCTGATA+CGG | 0.475335 | 4:+57370238 | None:intergenic |
| GAAAGCTAGGGCTGCGTCGT+TGG | 0.478279 | 4:-57370407 | MsG0480021395.01.T01:CDS |
| AGCTAGGGCTGCGTCGTTGG+AGG | 0.489293 | 4:-57370404 | MsG0480021395.01.T01:CDS |
| CTGCTGAAGATGATCAGGTT+GGG | 0.489651 | 4:-57370522 | MsG0480021395.01.T01:CDS |
| AGGCCAGAATTTGGGGCTCA+AGG | 0.491612 | 4:-57370047 | MsG0480021395.01.T01:CDS |
| CAAGCTTCCAGTAAAAGAAA+AGG | 0.495698 | 4:-57369977 | MsG0480021395.01.T01:CDS |
| ATCTTCAGCAGGGACAATCT+TGG | 0.499105 | 4:+57370534 | None:intergenic |
| TTGGGGCTCAAGGATCTTCG+TGG | 0.500226 | 4:-57370037 | MsG0480021395.01.T01:CDS |
| CCATCGAATCCATCCTCATT+CGG | 0.507560 | 4:+57370100 | None:intergenic |
| GGGTTCATCACATGAGAGCC+AGG | 0.513240 | 4:+57370196 | None:intergenic |
| GCATATTGCCTTCGTCCAGA+TGG | 0.514127 | 4:-57370148 | MsG0480021395.01.T01:CDS |
| TGTCCCTGCTGAAGATGATC+AGG | 0.516014 | 4:-57370527 | MsG0480021395.01.T01:CDS |
| CCAGTAAGAAGCGACCGGTT+GGG | 0.517346 | 4:-57370465 | MsG0480021395.01.T01:CDS |
| ATCGTGAGAAGAAGAAAGCT+AGG | 0.518063 | 4:-57370420 | MsG0480021395.01.T01:CDS |
| TAATGTGCAGTGTGATGATC+GGG | 0.521659 | 4:-57370170 | MsG0480021395.01.T01:CDS |
| CTTTGGAGGCCGAAGTTGCG+AGG | 0.525689 | 4:-57370318 | MsG0480021395.01.T01:CDS |
| CCAACCTGATCATCTTCAGC+AGG | 0.525807 | 4:+57370523 | None:intergenic |
| GATGAGGAAGTTGCAAGGGC+AGG | 0.525833 | 4:-57370344 | MsG0480021395.01.T01:CDS |
| TCCAGTAAGAAGCGACCGGT+TGG | 0.526553 | 4:-57370466 | MsG0480021395.01.T01:CDS |
| AGGATGAGGTCATGAAATTG+AGG | 0.534541 | 4:-57370384 | MsG0480021395.01.T01:CDS |
| ATCGCGGGATTCACATTCGC+GGG | 0.538798 | 4:+57370226 | None:intergenic |
| CATATTGCCTTCGTCCAGAT+GGG | 0.548979 | 4:-57370147 | MsG0480021395.01.T01:CDS |
| AATTCTGGCCTCCCATACAC+TGG | 0.551814 | 4:+57370059 | None:intergenic |
| ATGGCTGAATTTCAAACAAG+TGG | 0.554218 | 4:-57370676 | MsG0480021395.01.T01:CDS |
| GTGGCGTCGCCGAATGAGGA+TGG | 0.554803 | 4:-57370109 | MsG0480021395.01.T01:CDS |
| GACCAGGTGGGTTACACGTG+TGG | 0.559695 | 4:+57370596 | None:intergenic |
| AATCCCGCGATGAATTTGCC+TGG | 0.562632 | 4:-57370214 | MsG0480021395.01.T01:CDS |
| ACACTTCAACCTCGCAACTT+CGG | 0.570082 | 4:+57370309 | None:intergenic |
| GTTTGTTGGTTGATATTAGG+GGG | 0.578395 | 4:-57370288 | MsG0480021395.01.T01:CDS |
| GGATGAGGTCATGAAATTGA+GGG | 0.578672 | 4:-57370383 | MsG0480021395.01.T01:CDS |
| ACACGTGTGGGTATGAGTAC+AGG | 0.580524 | 4:+57370609 | None:intergenic |
| TGTTTGTTGGTTGATATTAG+GGG | 0.581606 | 4:-57370289 | MsG0480021395.01.T01:CDS |
| GTAATGTGCAGTGTGATGAT+CGG | 0.581966 | 4:-57370171 | MsG0480021395.01.T01:CDS |
| GAAGTCCAGTAAGAAGCGAC+CGG | 0.585566 | 4:-57370470 | MsG0480021395.01.T01:CDS |
| TTTGAGAGTCTCCAGTGTAT+GGG | 0.588557 | 4:-57370070 | MsG0480021395.01.T01:CDS |
| GTATGGGAGGCCAGAATTTG+GGG | 0.595109 | 4:-57370054 | MsG0480021395.01.T01:CDS |
| ATTTGATGAGGAAGTTGCAA+GGG | 0.596253 | 4:-57370348 | MsG0480021395.01.T01:CDS |
| CCGAATGAGGATGGATTCGA+TGG | 0.597469 | 4:-57370100 | MsG0480021395.01.T01:CDS |
| TGAAGTGGCGTCGCCGAATG+AGG | 0.598815 | 4:-57370113 | MsG0480021395.01.T01:CDS |
| CATCGCGGGATTCACATTCG+CGG | 0.599241 | 4:+57370225 | None:intergenic |
| AAGGATCTTCGTGGTTGTGG+AGG | 0.602836 | 4:-57370028 | MsG0480021395.01.T01:CDS |
| CATTTGATGAGGAAGTTGCA+AGG | 0.604562 | 4:-57370349 | MsG0480021395.01.T01:CDS |
| ACCCACACGTGTAACCCACC+TGG | 0.607124 | 4:-57370598 | MsG0480021395.01.T01:CDS |
| ACCAGGTGGGTTACACGTGT+GGG | 0.610384 | 4:+57370597 | None:intergenic |
| GAGCCAGGCAAATTCATCGC+GGG | 0.610422 | 4:+57370211 | None:intergenic |
| TCGTGAGAAGAAGAAAGCTA+GGG | 0.612179 | 4:-57370419 | MsG0480021395.01.T01:CDS |
| TGGGAAGATTGCTGCTGAAG+TGG | 0.614233 | 4:-57370128 | MsG0480021395.01.T01:CDS |
| CTTTGAATCAGCATTTGATG+AGG | 0.616238 | 4:-57370360 | MsG0480021395.01.T01:CDS |
| CAATCTTCCCATCTGGACGA+AGG | 0.622375 | 4:+57370140 | None:intergenic |
| CCTGCTGAAGATGATCAGGT+TGG | 0.627520 | 4:-57370523 | MsG0480021395.01.T01:CDS |
| GAGAGTCTCCAGTGTATGGG+AGG | 0.629740 | 4:-57370067 | MsG0480021395.01.T01:CDS |
| GCGACCGGTTGGGAATAAAG+AGG | 0.649541 | 4:-57370455 | MsG0480021395.01.T01:CDS |
| CAACCTGATCATCTTCAGCA+GGG | 0.684116 | 4:+57370524 | None:intergenic |
| ACCGGTTGGGAATAAAGAGG+CGG | 0.690479 | 4:-57370452 | MsG0480021395.01.T01:CDS |
| CATCACACTGCACATTACAA+GGG | 0.696358 | 4:+57370176 | None:intergenic |
| AGAGCCAGGCAAATTCATCG+CGG | 0.740100 | 4:+57370210 | None:intergenic |
| GAATTGACATTAGACAACGT+CGG | 0.759673 | 4:+57370001 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTGATGAATTGTTGA+AGG | - | Chr4:57370056-57370075 | MsG0480021395.01.T01:CDS | 20.0% |
| ATTTCAAACAAGTGGTTCAA+TGG | - | Chr4:57370029-57370048 | MsG0480021395.01.T01:CDS | 30.0% | |
| ! | AGTGTTTGTTGGTTGATATT+AGG | - | Chr4:57370406-57370425 | MsG0480021395.01.T01:CDS | 30.0% |
| ! | GTGTTTGTTGGTTGATATTA+GGG | - | Chr4:57370407-57370426 | MsG0480021395.01.T01:CDS | 30.0% |
| ! | TGTTTGTTGGTTGATATTAG+GGG | - | Chr4:57370408-57370427 | MsG0480021395.01.T01:CDS | 30.0% |
| ATGGCTGAATTTCAAACAAG+TGG | - | Chr4:57370021-57370040 | MsG0480021395.01.T01:CDS | 35.0% | |
| ATTTGATGAGGAAGTTGCAA+GGG | - | Chr4:57370349-57370368 | MsG0480021395.01.T01:CDS | 35.0% | |
| CAAGCTTCCAGTAAAAGAAA+AGG | - | Chr4:57370720-57370739 | MsG0480021395.01.T01:CDS | 35.0% | |
| CTTTGAATCAGCATTTGATG+AGG | - | Chr4:57370337-57370356 | MsG0480021395.01.T01:CDS | 35.0% | |
| GAATTGACATTAGACAACGT+CGG | + | Chr4:57370699-57370718 | None:intergenic | 35.0% | |
| ! | GTCATCACCTTTTCTTTTAC+TGG | + | Chr4:57370730-57370749 | None:intergenic | 35.0% |
| ! | GTTTGAAATTCAGCCATGTT+TGG | + | Chr4:57370018-57370037 | None:intergenic | 35.0% |
| ! | GTTTGTTGGTTGATATTAGG+GGG | - | Chr4:57370409-57370428 | MsG0480021395.01.T01:CDS | 35.0% |
| AGGATGAGGTCATGAAATTG+AGG | - | Chr4:57370313-57370332 | MsG0480021395.01.T01:CDS | 40.0% | |
| ATATTAGGGGGAGGATTGAA+GGG | - | Chr4:57370421-57370440 | MsG0480021395.01.T01:CDS | 40.0% | |
| ATCGTGAGAAGAAGAAAGCT+AGG | - | Chr4:57370277-57370296 | MsG0480021395.01.T01:CDS | 40.0% | |
| CATCACACTGCACATTACAA+GGG | + | Chr4:57370524-57370543 | None:intergenic | 40.0% | |
| CATTTGATGAGGAAGTTGCA+AGG | - | Chr4:57370348-57370367 | MsG0480021395.01.T01:CDS | 40.0% | |
| GGATGAGGTCATGAAATTGA+GGG | - | Chr4:57370314-57370333 | MsG0480021395.01.T01:CDS | 40.0% | |
| GTAATGTGCAGTGTGATGAT+CGG | - | Chr4:57370526-57370545 | MsG0480021395.01.T01:CDS | 40.0% | |
| GTGTGAGTGTGTGAAAAATC+AGG | + | Chr4:57370126-57370145 | None:intergenic | 40.0% | |
| TAATGTGCAGTGTGATGATC+GGG | - | Chr4:57370527-57370546 | MsG0480021395.01.T01:CDS | 40.0% | |
| TCATCACACTGCACATTACA+AGG | + | Chr4:57370525-57370544 | None:intergenic | 40.0% | |
| TCGTGAGAAGAAGAAAGCTA+GGG | - | Chr4:57370278-57370297 | MsG0480021395.01.T01:CDS | 40.0% | |
| TTTGAGAGTCTCCAGTGTAT+GGG | - | Chr4:57370627-57370646 | MsG0480021395.01.T01:CDS | 40.0% | |
| ACACTTCAACCTCGCAACTT+CGG | + | Chr4:57370391-57370410 | None:intergenic | 45.0% | |
| ACATTCGCGGGTTTCTGATA+CGG | + | Chr4:57370462-57370481 | None:intergenic | 45.0% | |
| ATCTTCAGCAGGGACAATCT+TGG | + | Chr4:57370166-57370185 | None:intergenic | 45.0% | |
| CAACCTGATCATCTTCAGCA+GGG | + | Chr4:57370176-57370195 | None:intergenic | 45.0% | |
| CATATTGCCTTCGTCCAGAT+GGG | - | Chr4:57370550-57370569 | MsG0480021395.01.T01:CDS | 45.0% | |
| CCATCGAATCCATCCTCATT+CGG | + | Chr4:57370600-57370619 | None:intergenic | 45.0% | |
| CTGCTGAAGATGATCAGGTT+GGG | - | Chr4:57370175-57370194 | MsG0480021395.01.T01:CDS | 45.0% | |
| GATATTAGGGGGAGGATTGA+AGG | - | Chr4:57370420-57370439 | MsG0480021395.01.T01:CDS | 45.0% | |
| GGAGGATTGAAGGGGAAATT+GGG | - | Chr4:57370430-57370449 | MsG0480021395.01.T01:CDS | 45.0% | |
| GTGAAAAATCAGGACCAGGT+GGG | + | Chr4:57370116-57370135 | None:intergenic | 45.0% | |
| GTGTGTGAAAAATCAGGACC+AGG | + | Chr4:57370120-57370139 | None:intergenic | 45.0% | |
| GTTTGAGAGTCTCCAGTGTA+TGG | - | Chr4:57370626-57370645 | MsG0480021395.01.T01:CDS | 45.0% | |
| TATTAGGGGGAGGATTGAAG+GGG | - | Chr4:57370422-57370441 | MsG0480021395.01.T01:CDS | 45.0% | |
| TGTATGGGAGGCCAGAATTT+GGG | - | Chr4:57370642-57370661 | MsG0480021395.01.T01:CDS | 45.0% | |
| TGTGAAAAATCAGGACCAGG+TGG | + | Chr4:57370117-57370136 | None:intergenic | 45.0% | |
| ! | TGCGAGGTTGAAGTGTTTGT+TGG | - | Chr4:57370395-57370414 | MsG0480021395.01.T01:CDS | 45.0% |
| ! | TGTTGGTTGATATTAGGGGG+AGG | - | Chr4:57370412-57370431 | MsG0480021395.01.T01:CDS | 45.0% |
| !!! | CGTGTTTTCGAGTCCAAACA+TGG | - | Chr4:57370002-57370021 | MsG0480021395.01.T01:CDS | 45.0% |
| AAGGATCTTCGTGGTTGTGG+AGG | - | Chr4:57370669-57370688 | MsG0480021395.01.T01:CDS | 50.0% | |
| AATCCCGCGATGAATTTGCC+TGG | - | Chr4:57370483-57370502 | MsG0480021395.01.T01:CDS | 50.0% | |
| AATTCTGGCCTCCCATACAC+TGG | + | Chr4:57370641-57370660 | None:intergenic | 50.0% | |
| ACACGTGTGGGTATGAGTAC+AGG | + | Chr4:57370091-57370110 | None:intergenic | 50.0% | |
| ACCGCCTCTTTATTCCCAAC+CGG | + | Chr4:57370249-57370268 | None:intergenic | 50.0% | |
| ACCGGTTGGGAATAAAGAGG+CGG | - | Chr4:57370245-57370264 | MsG0480021395.01.T01:CDS | 50.0% | |
| AGAGCCAGGCAAATTCATCG+CGG | + | Chr4:57370490-57370509 | None:intergenic | 50.0% | |
| CAATCTTCCCATCTGGACGA+AGG | + | Chr4:57370560-57370579 | None:intergenic | 50.0% | |
| CCAACCTGATCATCTTCAGC+AGG | + | Chr4:57370177-57370196 | None:intergenic | 50.0% | |
| CCTGCTGAAGATGATCAGGT+TGG | - | Chr4:57370174-57370193 | MsG0480021395.01.T01:CDS | 50.0% | |
| CTCAAGGATCTTCGTGGTTG+TGG | - | Chr4:57370666-57370685 | MsG0480021395.01.T01:CDS | 50.0% | |
| GAAGTCCAGTAAGAAGCGAC+CGG | - | Chr4:57370227-57370246 | MsG0480021395.01.T01:CDS | 50.0% | |
| GATCCTTGAGCCCCAAATTC+TGG | + | Chr4:57370656-57370675 | None:intergenic | 50.0% | |
| GCATATTGCCTTCGTCCAGA+TGG | - | Chr4:57370549-57370568 | MsG0480021395.01.T01:CDS | 50.0% | |
| GGGAGGATTGAAGGGGAAAT+TGG | - | Chr4:57370429-57370448 | MsG0480021395.01.T01:CDS | 50.0% | |
| GTATGGGAGGCCAGAATTTG+GGG | - | Chr4:57370643-57370662 | MsG0480021395.01.T01:CDS | 50.0% | |
| GTGTATGGGAGGCCAGAATT+TGG | - | Chr4:57370641-57370660 | MsG0480021395.01.T01:CDS | 50.0% | |
| TCAGCAGCAATCTTCCCATC+TGG | + | Chr4:57370567-57370586 | None:intergenic | 50.0% | |
| TGGGAAGATTGCTGCTGAAG+TGG | - | Chr4:57370569-57370588 | MsG0480021395.01.T01:CDS | 50.0% | |
| TGTCCCTGCTGAAGATGATC+AGG | - | Chr4:57370170-57370189 | MsG0480021395.01.T01:CDS | 50.0% | |
| ! | CCGAATGAGGATGGATTCGA+TGG | - | Chr4:57370597-57370616 | MsG0480021395.01.T01:CDS | 50.0% |
| ATCGCGGGATTCACATTCGC+GGG | + | Chr4:57370474-57370493 | None:intergenic | 55.0% | |
| CATCGCGGGATTCACATTCG+CGG | + | Chr4:57370475-57370494 | None:intergenic | 55.0% | |
| CCAGTAAGAAGCGACCGGTT+GGG | - | Chr4:57370232-57370251 | MsG0480021395.01.T01:CDS | 55.0% | |
| GAGAGTCTCCAGTGTATGGG+AGG | - | Chr4:57370630-57370649 | MsG0480021395.01.T01:CDS | 55.0% | |
| GAGCCAGGCAAATTCATCGC+GGG | + | Chr4:57370489-57370508 | None:intergenic | 55.0% | |
| GATCTTCGTGGTTGTGGAGG+TGG | - | Chr4:57370672-57370691 | MsG0480021395.01.T01:CDS | 55.0% | |
| GATGAGGAAGTTGCAAGGGC+AGG | - | Chr4:57370353-57370372 | MsG0480021395.01.T01:CDS | 55.0% | |
| GCGACCGGTTGGGAATAAAG+AGG | - | Chr4:57370242-57370261 | MsG0480021395.01.T01:CDS | 55.0% | |
| GGGTTCATCACATGAGAGCC+AGG | + | Chr4:57370504-57370523 | None:intergenic | 55.0% | |
| TCCAGTAAGAAGCGACCGGT+TGG | - | Chr4:57370231-57370250 | MsG0480021395.01.T01:CDS | 55.0% | |
| TTGGGGCTCAAGGATCTTCG+TGG | - | Chr4:57370660-57370679 | MsG0480021395.01.T01:CDS | 55.0% | |
| ! | AGGCCAGAATTTGGGGCTCA+AGG | - | Chr4:57370650-57370669 | MsG0480021395.01.T01:CDS | 55.0% |
| !! | ACCAGGTGGGTTACACGTGT+GGG | + | Chr4:57370103-57370122 | None:intergenic | 55.0% |
| ACCCACACGTGTAACCCACC+TGG | - | Chr4:57370099-57370118 | MsG0480021395.01.T01:CDS | 60.0% | |
| CCCAACCGGTCGCTTCTTAC+TGG | + | Chr4:57370235-57370254 | None:intergenic | 60.0% | |
| GAAAGCTAGGGCTGCGTCGT+TGG | - | Chr4:57370290-57370309 | MsG0480021395.01.T01:CDS | 60.0% | |
| GTTGCAAGGGCAGGCTGCTT+TGG | - | Chr4:57370362-57370381 | MsG0480021395.01.T01:CDS | 60.0% | |
| TGAAGTGGCGTCGCCGAATG+AGG | - | Chr4:57370584-57370603 | MsG0480021395.01.T01:CDS | 60.0% | |
| ! | CTTTGGAGGCCGAAGTTGCG+AGG | - | Chr4:57370379-57370398 | MsG0480021395.01.T01:CDS | 60.0% |
| !! | GACCAGGTGGGTTACACGTG+TGG | + | Chr4:57370104-57370123 | None:intergenic | 60.0% |
| AGCTAGGGCTGCGTCGTTGG+AGG | - | Chr4:57370293-57370312 | MsG0480021395.01.T01:CDS | 65.0% | |
| GGCTGCGTCGTTGGAGGATG+AGG | - | Chr4:57370299-57370318 | MsG0480021395.01.T01:CDS | 65.0% | |
| GTGGCGTCGCCGAATGAGGA+TGG | - | Chr4:57370588-57370607 | MsG0480021395.01.T01:CDS | 65.0% | |
| ! | GCAAGGGCAGGCTGCTTTGG+AGG | - | Chr4:57370365-57370384 | MsG0480021395.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 57369967 | 57370752 | 57369967 | ID=MsG0480021395.01;Name=MsG0480021395.01 |
| Chr4 | mRNA | 57369967 | 57370752 | 57369967 | ID=MsG0480021395.01.T01;Parent=MsG0480021395.01;Name=MsG0480021395.01.T01;_AED=0.41;_eAED=0.41;_QI=0|-1|0|1|-1|1|1|0|261 |
| Chr4 | exon | 57369967 | 57370752 | 57369967 | ID=MsG0480021395.01.T01:exon:6555;Parent=MsG0480021395.01.T01 |
| Chr4 | CDS | 57369967 | 57370752 | 57369967 | ID=MsG0480021395.01.T01:cds;Parent=MsG0480021395.01.T01 |
| Gene Sequence |
| Protein sequence |
