AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014541.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014541.01.T01 MTR_3g059000 98.588 708 8 1 1 706 1 708 0.0 1379
MsG0380014541.01.T01 MTR_3g058990 72.191 712 138 12 1 706 1 658 0.0 721
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014541.01.T01 AT5G55670 54.954 757 243 21 1 706 1 710 0.0 556
MsG0380014541.01.T01 AT5G55670 48.000 450 147 14 1 406 1 407 4.22e-84 277
MsG0380014541.01.T01 AT5G55670 59.794 194 51 4 528 706 404 585 3.07e-51 188
MsG0380014541.01.T01 AT1G13190 32.775 717 284 26 19 702 20 571 3.42e-69 237

Find 305 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATGAATCTAGGGTTTC+TGG 0.084737 3:-56253430 MsG0380014541.01.T01:CDS
TCATCACGGTGCTTTCTTTC+TGG 0.103454 3:+56251900 None:intergenic
GTACCGGTGGTGGTGGAATT+AGG 0.159122 3:-56253360 MsG0380014541.01.T01:CDS
TGCTTTCTTTCTGGCCATTC+AGG 0.192105 3:+56251909 None:intergenic
CCACCCCATCCGCCCATATT+TGG 0.212636 3:+56252164 None:intergenic
ACCATTCATCCCTTCCTTAC+AGG 0.228120 3:+56252862 None:intergenic
ATGAATGGTCATTCGTTTAA+TGG 0.249585 3:-56252848 MsG0380014541.01.T01:CDS
CTGTCAATCCGATGAGAAAT+AGG 0.252618 3:-56252538 MsG0380014541.01.T01:CDS
GAATGATGGTGTTGGAGTTC+AGG 0.253174 3:-56253281 MsG0380014541.01.T01:CDS
GTTGGTGGTGGAGGAGGTGG+TGG 0.255621 3:-56253061 MsG0380014541.01.T01:CDS
GGGTATGGATGGTCCTAATA+TGG 0.258478 3:-56252201 MsG0380014541.01.T01:CDS
GGTGTTGGTGGTGGAGGAGG+TGG 0.269109 3:-56253064 MsG0380014541.01.T01:CDS
GTGAGGAACCTGGTGGTGGC+AGG 0.283008 3:-56252142 MsG0380014541.01.T01:CDS
GGAGGTGTTGGTGGTGGAGG+AGG 0.283109 3:-56253067 MsG0380014541.01.T01:CDS
AGGTCAAAAGATGCTGATTA+TGG 0.291684 3:-56251639 MsG0380014541.01.T01:CDS
GAACCTGGTGGTGGCAGGGC+TGG 0.298264 3:-56252137 MsG0380014541.01.T01:CDS
AATAATAACAATAGAGGTTA+TGG 0.305047 3:-56252611 MsG0380014541.01.T01:CDS
TGGTCCGGCACCTCCGTTCT+CGG 0.318845 3:-56252345 MsG0380014541.01.T01:CDS
TTCTGCCACCCAGCTCTATC+AGG 0.319704 3:+56252059 None:intergenic
AGGTTATGGAAGAGGTAATT+GGG 0.321683 3:-56252597 MsG0380014541.01.T01:CDS
GTGGAGGGGTTAATCTTAAT+AGG 0.323062 3:-56253150 MsG0380014541.01.T01:CDS
TCCTCAGCAAATTATGAATC+AGG 0.325362 3:-56252429 MsG0380014541.01.T01:CDS
GAGGTTATGGAAGAGGTAAT+TGG 0.327457 3:-56252598 MsG0380014541.01.T01:CDS
CTTAATAGGGTTGGAGGAAA+TGG 0.331429 3:-56253136 MsG0380014541.01.T01:CDS
ATAGGTGGTAGAGGTATAAT+TGG 0.332537 3:-56252506 MsG0380014541.01.T01:CDS
AGTGGTGTTGTTGGTGGTGG+AGG 0.332763 3:-56253166 MsG0380014541.01.T01:CDS
AGGAAGTACTTTGTTATTTG+TGG 0.333873 3:-56253038 MsG0380014541.01.T01:CDS
TCCGGCCACATTCCCATATT+AGG 0.337509 3:+56252188 None:intergenic
TGGGCGAGGCTCAGAATAAT+AGG 0.346521 3:-56252778 MsG0380014541.01.T01:CDS
AATGTGGCCGGATCCAAATA+TGG 0.348257 3:-56252177 MsG0380014541.01.T01:CDS
TCAATCGGGTTCGGGTGTTC+AGG 0.355427 3:-56253497 MsG0380014541.01.T01:CDS
GGTGGAATTAGGGTTGAATT+AGG 0.356484 3:-56253349 MsG0380014541.01.T01:CDS
GGGATGATGCCTCAATTTCC+TGG 0.360064 3:-56252323 MsG0380014541.01.T01:CDS
TACCGGTGGTGGTGGAATTA+GGG 0.363590 3:-56253359 MsG0380014541.01.T01:CDS
GGTAATGGTGGAAATGGATT+TGG 0.364183 3:-56252485 MsG0380014541.01.T01:CDS
GGTGGTGGAGGAGGTGGTGG+AGG 0.371298 3:-56253058 MsG0380014541.01.T01:CDS
ATTGGTGGTGGAGGAGGTGA+AGG 0.371730 3:-56253091 MsG0380014541.01.T01:CDS
ATAATTGGTAATGGTGGAAA+TGG 0.371958 3:-56252491 MsG0380014541.01.T01:CDS
GTTGGAGGTGTTGGTTTGCC+TGG 0.373316 3:-56252299 MsG0380014541.01.T01:CDS
GGAAATAATGTTATTGCTAT+TGG 0.375081 3:-56253109 MsG0380014541.01.T01:CDS
ATCGTGAGCGGGACAGATAC+AGG 0.379036 3:-56251797 MsG0380014541.01.T01:CDS
AATGATGGTGTTGGAGTTCA+GGG 0.380197 3:-56253280 MsG0380014541.01.T01:CDS
TTGATGAATCTAGGGTTTCT+GGG 0.380221 3:-56253429 MsG0380014541.01.T01:CDS
GTTGAATTAGGTCAAGCATC+TGG 0.388751 3:-56253337 MsG0380014541.01.T01:CDS
GAAGCTGAGTTATGCAAGTA+TGG 0.393302 3:-56252980 MsG0380014541.01.T01:CDS
ATGGGTAGAATGGCAGGCTT+TGG 0.395593 3:-56252380 MsG0380014541.01.T01:CDS
TGAATGGTCATTCGTTTAAT+GGG 0.398915 3:-56252847 MsG0380014541.01.T01:CDS
GCATGATGAGGAGTGGGAGC+GGG 0.399423 3:-56251721 MsG0380014541.01.T01:CDS
GTGGTGTTGTTGGTGGTGGA+GGG 0.400261 3:-56253165 MsG0380014541.01.T01:CDS
GTGGGGTTAACCCGGGAAGA+AGG 0.401244 3:-56252727 MsG0380014541.01.T01:CDS
GGGACAGATACAGGGAAGAT+AGG 0.403470 3:-56251788 MsG0380014541.01.T01:CDS
AGAAATAGGGGTGGTGGGAT+AGG 0.404535 3:-56252524 MsG0380014541.01.T01:CDS
TTGAGGAAGAATGATGATTC+AGG 0.405258 3:-56253553 MsG0380014541.01.T01:CDS
GCAGGCTTTGGAGGCTATCC+TGG 0.406342 3:-56252368 MsG0380014541.01.T01:CDS
TGTCAATCCGATGAGAAATA+GGG 0.407839 3:-56252537 MsG0380014541.01.T01:CDS
AAGAAGGTTCAATCGGGTTC+GGG 0.408608 3:-56253505 MsG0380014541.01.T01:CDS
TAACCCCACCACCGGCAGTT+TGG 0.409185 3:+56252741 None:intergenic
TTTCCTGGTGTTGGAGGTGT+TGG 0.411185 3:-56252308 MsG0380014541.01.T01:CDS
AATGGATTTGGACAGGGTAT+TGG 0.411699 3:-56252473 MsG0380014541.01.T01:CDS
AGGACCATCCATACCCGATT+GGG 0.412131 3:+56252208 None:intergenic
GGTCCGGCACCTCCGTTCTC+GGG 0.412798 3:-56252344 MsG0380014541.01.T01:CDS
TTGTGGGTGATTTGCATTGG+TGG 0.416148 3:-56253021 MsG0380014541.01.T01:CDS
GGTGGTGGAGGAGGTGAAGG+GGG 0.418334 3:-56253088 MsG0380014541.01.T01:CDS
GGGGTTAACCCGGGAAGAAG+GGG 0.421478 3:-56252725 MsG0380014541.01.T01:CDS
GATCCGGTGGTTGGTGTTGT+TGG 0.423294 3:-56253475 MsG0380014541.01.T01:CDS
TGCCGGTGGTGGGGTTAACC+CGG 0.424708 3:-56252735 MsG0380014541.01.T01:CDS
AGGATGAGGAACACCATTCT+AGG 0.426512 3:-56251659 MsG0380014541.01.T01:CDS
GCTGATGTGGGAGCTAAGCC+TGG 0.428646 3:-56252698 MsG0380014541.01.T01:CDS
GTGTTGGTGTTGATGAATCT+AGG 0.429190 3:-56253438 MsG0380014541.01.T01:CDS
CTCAACCTGACAATACCCTT+TGG 0.430864 3:+56252910 None:intergenic
GAAGAAGGTTCAATCGGGTT+CGG 0.431799 3:-56253506 MsG0380014541.01.T01:CDS
GTTTCTGGGTTTCAGAATCA+AGG 0.432968 3:-56253415 MsG0380014541.01.T01:CDS
TTTCAGAATCAAGGGTTTAG+AGG 0.433448 3:-56253406 MsG0380014541.01.T01:CDS
ATGCCTCAATTTCCTGGTGT+TGG 0.438968 3:-56252317 MsG0380014541.01.T01:CDS
ATAGCAATAACATTATTTCC+AGG 0.442010 3:+56253112 None:intergenic
TGGTGGTGGAGGAGGTGAAG+GGG 0.443449 3:-56253089 MsG0380014541.01.T01:CDS
CCTCAATTTCCTGGTGTTGG+AGG 0.446456 3:-56252314 MsG0380014541.01.T01:CDS
GGTGGTGAGGAACCTGGTGG+TGG 0.446918 3:-56252146 MsG0380014541.01.T01:CDS
CCTCATCATGCTCTGGTTCA+CGG 0.446985 3:+56251733 None:intergenic
GTTGGATCGGGTACCGGTGG+TGG 0.448718 3:-56253370 MsG0380014541.01.T01:CDS
TGAGGAACCTGGTGGTGGCA+GGG 0.451354 3:-56252141 MsG0380014541.01.T01:CDS
GGTAATTATCAAGGTGGAGA+TGG 0.452637 3:-56252653 MsG0380014541.01.T01:CDS
TGGTGGAAATGGATTTGGAC+AGG 0.453155 3:-56252480 MsG0380014541.01.T01:CDS
GGCTTAGCTCCCACATCAGC+AGG 0.453413 3:+56252701 None:intergenic
GGGTTCGGGTGTTCAGGATC+CGG 0.455022 3:-56253491 MsG0380014541.01.T01:CDS
TCAGAATAATAGGAATCAAC+AGG 0.455870 3:-56252768 MsG0380014541.01.T01:CDS
GTACCTTCGCTCAGAAGAAC+CGG 0.456411 3:+56251995 None:intergenic
AACAATAATAATAACAATAG+AGG 0.456784 3:-56252617 MsG0380014541.01.T01:CDS
GGGATGCCTGTGAATGGAAT+GGG 0.457540 3:-56252239 MsG0380014541.01.T01:CDS
TCCCACTCCTCATCATGCTC+TGG 0.460102 3:+56251726 None:intergenic
GGGAATTCTGGAGTTGGATC+GGG 0.461658 3:-56253382 MsG0380014541.01.T01:CDS
GGTAGAATGGCAGGCTTTGG+AGG 0.461925 3:-56252377 MsG0380014541.01.T01:CDS
ATATGCTGCAACTGCCTGTA+AGG 0.462613 3:-56252876 MsG0380014541.01.T01:CDS
GGTCCCATGGGTAGAATGGC+AGG 0.463195 3:-56252386 MsG0380014541.01.T01:CDS
TCCTGCATTTGGTGGTCCCA+TGG 0.463497 3:-56252399 MsG0380014541.01.T01:CDS
ATTGCTATTGGTGGTGGAGG+AGG 0.463547 3:-56253097 MsG0380014541.01.T01:CDS
CTATTTCTCATCGGATTGAC+AGG 0.464317 3:+56252539 None:intergenic
CAACAACATGGTGGTGTTGT+TGG 0.464811 3:-56253217 MsG0380014541.01.T01:CDS
GGGCTGGAGAGTCAAGTTAT+GGG 0.464924 3:-56252121 MsG0380014541.01.T01:CDS
TGATGAGAAGAAGGTTCAAT+CGG 0.466730 3:-56253512 MsG0380014541.01.T01:CDS
AGAACCGGACCAGTCCCTTT+CGG 0.468266 3:+56252010 None:intergenic
GTGAACCAAACTGCCGGTGG+TGG 0.468522 3:-56252746 MsG0380014541.01.T01:CDS
GATGATGCCCCAATCGGGTA+TGG 0.468653 3:-56252216 MsG0380014541.01.T01:CDS
TACAGGGATGATAGAGATCA+AGG 0.470663 3:-56251975 MsG0380014541.01.T01:CDS
CCAAGTGGTGTTGTTGGTGG+TGG 0.473693 3:-56253169 MsG0380014541.01.T01:CDS
ACAGATATGCTGATCATCAT+AGG 0.474123 3:-56251764 MsG0380014541.01.T01:CDS
AGCATGATGAGGAGTGGGAG+CGG 0.475393 3:-56251722 MsG0380014541.01.T01:CDS
GGATGGGGTGGTGAGGAACC+TGG 0.475809 3:-56252152 MsG0380014541.01.T01:CDS
GGATCGGGTACCGGTGGTGG+TGG 0.476347 3:-56253367 MsG0380014541.01.T01:CDS
CCAAATATGGGCGGATGGGG+TGG 0.477803 3:-56252164 MsG0380014541.01.T01:CDS
ACGATCACGTGACCGTGGTC+GGG 0.478106 3:-56251859 MsG0380014541.01.T01:CDS
CTCGAGATCGTGAGCGCGAA+AGG 0.479654 3:-56251830 MsG0380014541.01.T01:CDS
GGATCCAAATATGGGCGGAT+GGG 0.480574 3:-56252168 MsG0380014541.01.T01:CDS
TGGGGTTAACCCGGGAAGAA+GGG 0.481851 3:-56252726 MsG0380014541.01.T01:CDS
CAAGTTCCAAGTGGTGTTGT+TGG 0.482440 3:-56253175 MsG0380014541.01.T01:CDS
GATCCAAATATGGGCGGATG+GGG 0.482985 3:-56252167 MsG0380014541.01.T01:CDS
GGTAGAGGTATAATTGGTAA+TGG 0.483294 3:-56252500 MsG0380014541.01.T01:CDS
CATCCGCCCATATTTGGATC+CGG 0.484005 3:+56252170 None:intergenic
TCTCCAGCCCTGCCACCACC+AGG 0.485249 3:+56252134 None:intergenic
GTGGACTACTGATGCTGAGC+TGG 0.485315 3:-56253002 MsG0380014541.01.T01:CDS
GATTCAGGTGGTAGAATTGA+GGG 0.485425 3:-56253538 MsG0380014541.01.T01:CDS
TGGAGGGGTTAATCTTAATA+GGG 0.485764 3:-56253149 MsG0380014541.01.T01:CDS
ATCCCCGAGAACGGAGGTGC+CGG 0.486506 3:+56252341 None:intergenic
GGTGGTAGTAATATTGCAAC+TGG 0.487592 3:-56252677 MsG0380014541.01.T01:CDS
GCTGAGGATGCATCATCGGC+GGG 0.488538 3:+56252444 None:intergenic
GGAAGTACTTTGTTATTTGT+GGG 0.488708 3:-56253037 MsG0380014541.01.T01:CDS
AGGGCTGGAGAGTCAAGTTA+TGG 0.489172 3:-56252122 MsG0380014541.01.T01:CDS
AACAATAGAGGTTATGGAAG+AGG 0.489326 3:-56252605 MsG0380014541.01.T01:CDS
GCAGCATCAGACCATCAGTA+TGG 0.490533 3:-56252092 MsG0380014541.01.T01:CDS
CTGGGTGGCAGAATAATATG+AGG 0.491968 3:-56252049 MsG0380014541.01.T01:CDS
GGGGAATTCTGGAGTTGGAT+CGG 0.494719 3:-56253383 MsG0380014541.01.T01:CDS
GCCTGTAAGGAAGGGATGAA+TGG 0.495821 3:-56252863 MsG0380014541.01.T01:CDS
GGGTTAACCCGGGAAGAAGG+GGG 0.495920 3:-56252724 MsG0380014541.01.T01:CDS
TGGTGGTCCCATGGGTAGAA+TGG 0.496209 3:-56252390 MsG0380014541.01.T01:CDS
GGAAGAGGTAATTGGGGTAG+AGG 0.496528 3:-56252590 MsG0380014541.01.T01:CDS
GGGGTTAATCTTAATAGGGT+TGG 0.497622 3:-56253145 MsG0380014541.01.T01:CDS
GTTATTGCTATTGGTGGTGG+AGG 0.497635 3:-56253100 MsG0380014541.01.T01:CDS
TAGAGGGAACAATCCTGGTA+TGG 0.498649 3:-56252573 MsG0380014541.01.T01:CDS
CATGATGAGGAGTGGGAGCG+GGG 0.499344 3:-56251720 MsG0380014541.01.T01:CDS
CTTTACAACGATGTTAATGT+TGG 0.501235 3:-56253595 MsG0380014541.01.T01:CDS
TGGTGTTGTTGGTGGTGGAG+GGG 0.502558 3:-56253164 MsG0380014541.01.T01:CDS
GTTCTTCTGAGCGAAGGTAC+AGG 0.505164 3:-56251992 MsG0380014541.01.T01:CDS
AACGATCACGTGACCGTGGT+CGG 0.505395 3:-56251860 MsG0380014541.01.T01:CDS
AAATTGAGGAACAGAGAGGT+GGG 0.505477 3:-56253303 MsG0380014541.01.T01:CDS
CCGATGAGAAATAGGGGTGG+TGG 0.506509 3:-56252530 MsG0380014541.01.T01:CDS
GTGGTTGGTGTTGTTGGTGA+GGG 0.506640 3:-56253469 MsG0380014541.01.T01:CDS
GGAAGAGGGATGCCTGTGAA+TGG 0.507911 3:-56252245 MsG0380014541.01.T01:CDS
ATGTGGCCGGATCCAAATAT+GGG 0.509782 3:-56252176 MsG0380014541.01.T01:CDS
AACGGAGGTGCCGGACCACC+AGG 0.511033 3:+56252350 None:intergenic
AATGTTATTGCTATTGGTGG+TGG 0.512566 3:-56253103 MsG0380014541.01.T01:CDS
TATTTGTGGGTGATTTGCAT+TGG 0.512963 3:-56253024 MsG0380014541.01.T01:CDS
ATCATCCCCATTCCATTCAC+AGG 0.513647 3:+56252233 None:intergenic
TGGGAAATTGAGTGAAATTG+AGG 0.514078 3:-56253317 MsG0380014541.01.T01:CDS
TGGCCATTCAGGATCATGTC+CGG 0.514343 3:+56251920 None:intergenic
GGTGTTCAGGATCCGGTGGT+TGG 0.514631 3:-56253484 MsG0380014541.01.T01:CDS
AATGGGGATGATGCCCCAAT+CGG 0.516902 3:-56252222 MsG0380014541.01.T01:CDS
CCACCACCAACAACACCACT+TGG 0.517634 3:+56253169 None:intergenic
TCCCGGGTTAACCCCACCAC+CGG 0.519319 3:+56252733 None:intergenic
TGGTGAGAGTGGAGATCCTA+TGG 0.519526 3:-56253698 MsG0380014541.01.T01:CDS
TGAACCAAACTGCCGGTGGT+GGG 0.519641 3:-56252745 MsG0380014541.01.T01:CDS
GAACAGAGAGGTGGGAATGA+TGG 0.521511 3:-56253295 MsG0380014541.01.T01:CDS
GGTATGGATGGTCCTAATAT+GGG 0.521905 3:-56252200 MsG0380014541.01.T01:CDS
GTTAATCTTAATAGGGTTGG+AGG 0.524976 3:-56253142 MsG0380014541.01.T01:CDS
TGGGGTAGAGGGAACAATCC+TGG 0.526032 3:-56252578 MsG0380014541.01.T01:CDS
ATCAAGATTATCACAGGATG+AGG 0.526107 3:-56251673 MsG0380014541.01.T01:CDS
CCTCCAACACCAGGAAATTG+AGG 0.526290 3:+56252314 None:intergenic
GTTCCAAGTGGTGTTGTTGG+TGG 0.526669 3:-56253172 MsG0380014541.01.T01:CDS
CCTGCATTTGGTGGTCCCAT+GGG 0.526946 3:-56252398 MsG0380014541.01.T01:CDS
TTGAATTAGGTCAAGCATCT+GGG 0.528023 3:-56253336 MsG0380014541.01.T01:CDS
TGGAGGCTATCCTGGTGGTC+CGG 0.529660 3:-56252360 MsG0380014541.01.T01:CDS
GCTGCAACTGCCTGTAAGGA+AGG 0.530594 3:-56252872 MsG0380014541.01.T01:CDS
TGATTCAGGTGGTAGAATTG+AGG 0.531962 3:-56253539 MsG0380014541.01.T01:CDS
CGGATCCAAATATGGGCGGA+TGG 0.533104 3:-56252169 MsG0380014541.01.T01:CDS
TCGAGATCGTGAGCGCGAAA+GGG 0.533414 3:-56251829 MsG0380014541.01.T01:CDS
ATATCTGCTGTAGCTGATGA+TGG 0.533479 3:-56253652 MsG0380014541.01.T01:CDS
AACCCTAATTCCACCACCAC+CGG 0.533956 3:+56253357 None:intergenic
TCTGGAGTTGGATCGGGTAC+CGG 0.533999 3:-56253376 MsG0380014541.01.T01:CDS
AACGATGTTAATGTTGGTGA+GGG 0.535233 3:-56253589 MsG0380014541.01.T01:CDS
GGTGGTGGGATAGGTGGTAG+AGG 0.535372 3:-56252515 MsG0380014541.01.T01:CDS
AATCCTGGTATGGGTGGTAG+AGG 0.535904 3:-56252563 MsG0380014541.01.T01:CDS
TACTGTTAAGAAAATGGGCG+AGG 0.536096 3:-56252792 MsG0380014541.01.T01:CDS
AGAGGTATAATTGGTAATGG+TGG 0.538059 3:-56252497 MsG0380014541.01.T01:CDS
AGAGGGAACAATCCTGGTAT+GGG 0.539437 3:-56252572 MsG0380014541.01.T01:CDS
TCCTAATATGGGAATGTGGC+CGG 0.540113 3:-56252189 MsG0380014541.01.T01:CDS
ATGGGGATGATGCCCCAATC+GGG 0.540485 3:-56252221 MsG0380014541.01.T01:CDS
TGTTGGTGTTGATGAATCTA+GGG 0.540584 3:-56253437 MsG0380014541.01.T01:CDS
AGGGATGCCTGTGAATGGAA+TGG 0.540944 3:-56252240 MsG0380014541.01.T01:CDS
ATGGATGAAGCTGGTGAGAG+TGG 0.541337 3:-56253709 MsG0380014541.01.T01:CDS
TTAACATGAGGTGCTACTCC+AGG 0.541597 3:+56252281 None:intergenic
GGACAGATACAGGGAAGATA+GGG 0.545324 3:-56251787 MsG0380014541.01.T01:CDS
GTAATTATCAAGGTGGAGAT+GGG 0.545329 3:-56252652 MsG0380014541.01.T01:CDS
TTCAGAATCAAGGGTTTAGA+GGG 0.546803 3:-56253405 MsG0380014541.01.T01:CDS
AAACCAACACCTCCAACACC+AGG 0.548121 3:+56252305 None:intergenic
CAACGATGTTAATGTTGGTG+AGG 0.548295 3:-56253590 MsG0380014541.01.T01:CDS
GGTTATGGAAGAGGTAATTG+GGG 0.551409 3:-56252596 MsG0380014541.01.T01:CDS
AATAGGGGTGGTGGGATAGG+TGG 0.551960 3:-56252521 MsG0380014541.01.T01:CDS
ATAGAGGATCCGAAAGGGAC+TGG 0.556094 3:-56252019 MsG0380014541.01.T01:CDS
GAAATTGAGGAACAGAGAGG+TGG 0.557421 3:-56253304 MsG0380014541.01.T01:CDS
GAAGAGGTAATTGGGGTAGA+GGG 0.557497 3:-56252589 MsG0380014541.01.T01:CDS
AGAATCAAGGGTTTAGAGGG+GGG 0.557810 3:-56253402 MsG0380014541.01.T01:CDS
ATTTGCTGAGGATGCATCAT+CGG 0.560332 3:+56252440 None:intergenic
CAGCAGATATAGCTTCGTTA+CGG 0.560404 3:+56253665 None:intergenic
CCCATGGGACCACCAAATGC+AGG 0.560887 3:+56252398 None:intergenic
ACCCTAATAATGGATGAAGC+TGG 0.561656 3:-56253718 None:intergenic
TATGGGCGGATGGGGTGGTG+AGG 0.561796 3:-56252159 MsG0380014541.01.T01:CDS
ATGCCCCAATCGGGTATGGA+TGG 0.561899 3:-56252212 MsG0380014541.01.T01:CDS
GCAACTGGCGGTAATTATCA+AGG 0.562883 3:-56252662 MsG0380014541.01.T01:CDS
AAAGCCTGCCATTCTACCCA+TGG 0.563042 3:+56252382 None:intergenic
GAAATCCAAAGGGTATTGTC+AGG 0.563157 3:-56252915 MsG0380014541.01.T01:CDS
TTGGTGGTGGAGGAGGTGAA+GGG 0.563645 3:-56253090 MsG0380014541.01.T01:CDS
ATGCCGGACATGATCCTGAA+TGG 0.563683 3:-56251923 MsG0380014541.01.T01:CDS
TAGGACCATCCATACCCGAT+TGG 0.564509 3:+56252207 None:intergenic
TTTCTGGGTTTCAGAATCAA+GGG 0.564798 3:-56253414 MsG0380014541.01.T01:CDS
GAACCAAACTGCCGGTGGTG+GGG 0.566772 3:-56252744 MsG0380014541.01.T01:CDS
AGAGGTGGGAATGATGGTGT+TGG 0.567936 3:-56253289 MsG0380014541.01.T01:CDS
ACCAGAGCATGATGAGGAGT+GGG 0.568730 3:-56251727 MsG0380014541.01.T01:CDS
GGTGAGGGAGTGAAGAGTGT+TGG 0.568963 3:-56253454 MsG0380014541.01.T01:CDS
AAGATGCTGATTATGGAAAG+AGG 0.570662 3:-56251632 MsG0380014541.01.T01:CDS
ATGATGAGGAGTGGGAGCGG+GGG 0.571157 3:-56251719 MsG0380014541.01.T01:CDS
AATAATGTTATTGCTATTGG+TGG 0.571653 3:-56253106 MsG0380014541.01.T01:CDS
GAGGTGAATCCTGATAGAGC+TGG 0.572872 3:-56252068 MsG0380014541.01.T01:CDS
CCCTGATTCATAATTTGCTG+AGG 0.573148 3:+56252428 None:intergenic
GACGCAAAAGCAACAACACA+CGG 0.573917 3:+56252821 None:intergenic
GGATCCGAAAGGGACTGGTC+CGG 0.574149 3:-56252014 MsG0380014541.01.T01:CDS
TGGGGTGGTGAGGAACCTGG+TGG 0.574865 3:-56252149 MsG0380014541.01.T01:CDS
ATGGACAAGTGAAGGAGGTG+AGG 0.575630 3:-56252961 MsG0380014541.01.T01:CDS
AAAAGATAGAGGATCCGAAA+GGG 0.575969 3:-56252024 MsG0380014541.01.T01:CDS
TGAGGCATCATCCCCGAGAA+CGG 0.575995 3:+56252332 None:intergenic
TTCTTCTGAGCGAAGGTACA+GGG 0.576817 3:-56251991 MsG0380014541.01.T01:CDS
GATGAGAAGAAGGTTCAATC+GGG 0.576960 3:-56253511 MsG0380014541.01.T01:CDS
CCACCACCCCTATTTCTCAT+CGG 0.577429 3:+56252530 None:intergenic
GCCGGTGGTGGGGTTAACCC+GGG 0.577492 3:-56252734 MsG0380014541.01.T01:CDS
GGTGGTTGGTGTTGTTGGTG+AGG 0.577753 3:-56253470 MsG0380014541.01.T01:CDS
AAGCTAGTGGGAAATCCAAA+GGG 0.577942 3:-56252925 MsG0380014541.01.T01:CDS
CCTCAGCAAATTATGAATCA+GGG 0.578716 3:-56252428 MsG0380014541.01.T01:CDS
CAGTAAATCAAGATTATCAC+AGG 0.578787 3:-56251679 MsG0380014541.01.T01:CDS
GGAGTTGGATCGGGTACCGG+TGG 0.581965 3:-56253373 MsG0380014541.01.T01:CDS
CTGATTATGGAAAGAGGAGG+CGG 0.582435 3:-56251626 MsG0380014541.01.T01:CDS
ATGATGGTGTTGGAGTTCAG+GGG 0.582618 3:-56253279 MsG0380014541.01.T01:CDS
AACCAGAGCATGATGAGGAG+TGG 0.583423 3:-56251728 MsG0380014541.01.T01:CDS
TGTTGTTGGAAACGATGGGT+TGG 0.583906 3:-56253203 MsG0380014541.01.T01:CDS
CGATGAGAAATAGGGGTGGT+GGG 0.587657 3:-56252529 MsG0380014541.01.T01:CDS
GTCCGGCACCTCCGTTCTCG+GGG 0.589107 3:-56252343 MsG0380014541.01.T01:CDS
GGTCCTCTACCACCCATACC+AGG 0.592678 3:+56252560 None:intergenic
TGCTGAGGATGCATCATCGG+CGG 0.595650 3:+56252443 None:intergenic
TTACGGTGGAACTGATCCAT+AGG 0.596056 3:+56253682 None:intergenic
ATTCAGGTGGTAGAATTGAG+GGG 0.596269 3:-56253537 MsG0380014541.01.T01:CDS
GGCTTTGGAGGCTATCCTGG+TGG 0.596829 3:-56252365 MsG0380014541.01.T01:CDS
CAGCAGCAACAGCAACAACA+TGG 0.597561 3:-56253229 MsG0380014541.01.T01:CDS
ATGCAAGTATGGACAAGTGA+AGG 0.598593 3:-56252969 MsG0380014541.01.T01:CDS
CAGAATCAAGGGTTTAGAGG+GGG 0.599693 3:-56253403 MsG0380014541.01.T01:CDS
CAACAGGTGAACCAAACTGC+CGG 0.599970 3:-56252752 MsG0380014541.01.T01:CDS
AAAGCTAGTGGGAAATCCAA+AGG 0.600695 3:-56252926 MsG0380014541.01.T01:CDS
TTCAGGTGGTAGAATTGAGG+GGG 0.603864 3:-56253536 MsG0380014541.01.T01:CDS
GGTGGTGTTGTTGGAAACGA+TGG 0.604505 3:-56253208 MsG0380014541.01.T01:CDS
CTGCAACTGCCTGTAAGGAA+GGG 0.606830 3:-56252871 MsG0380014541.01.T01:CDS
GATTCACCTCACCATACTGA+TGG 0.608524 3:+56252081 None:intergenic
CGAGATCGTGAGCGCGAAAG+GGG 0.610782 3:-56251828 MsG0380014541.01.T01:CDS
GGTGGAAATGGATTTGGACA+GGG 0.612223 3:-56252479 MsG0380014541.01.T01:CDS
CAGATATAGCTTCGTTACGG+TGG 0.617616 3:+56253668 None:intergenic
AAGCCTGCCATTCTACCCAT+GGG 0.620243 3:+56252383 None:intergenic
AGATCGTGAGCGCGAAAGGG+GGG 0.621518 3:-56251826 MsG0380014541.01.T01:CDS
TTCGGGTGTTCAGGATCCGG+TGG 0.622857 3:-56253488 MsG0380014541.01.T01:CDS
TCGTGAGCGGGACAGATACA+GGG 0.623073 3:-56251796 MsG0380014541.01.T01:CDS
GTCAATCCGATGAGAAATAG+GGG 0.626713 3:-56252536 MsG0380014541.01.T01:CDS
GGTCCGGTTCTTCTGAGCGA+AGG 0.627233 3:-56251998 MsG0380014541.01.T01:CDS
CAAGTATGGACAAGTGAAGG+AGG 0.629874 3:-56252966 MsG0380014541.01.T01:CDS
CCGTGAACCAGAGCATGATG+AGG 0.630498 3:-56251733 MsG0380014541.01.T01:CDS
TCACCAACAACACCAACCAC+CGG 0.634482 3:+56253472 None:intergenic
ATGGTCATTCGTTTAATGGG+AGG 0.634630 3:-56252844 MsG0380014541.01.T01:CDS
AGGGTTGGAGGAAATGGACC+TGG 0.637061 3:-56253130 MsG0380014541.01.T01:CDS
GGACCATCCATACCCGATTG+GGG 0.637802 3:+56252209 None:intergenic
AGGTGAATCCTGATAGAGCT+GGG 0.637986 3:-56252067 MsG0380014541.01.T01:CDS
GGGAACAATCCTGGTATGGG+TGG 0.644353 3:-56252569 MsG0380014541.01.T01:CDS
AGGAAGAATGATGATTCAGG+TGG 0.644777 3:-56253550 MsG0380014541.01.T01:CDS
CGCGAACGATCACGTGACCG+TGG 0.652791 3:-56251864 MsG0380014541.01.T01:CDS
GAGATCGTGAGCGCGAAAGG+GGG 0.653665 3:-56251827 MsG0380014541.01.T01:CDS
AAAGCACCGTGATGATAGAG+AGG 0.654163 3:-56251892 MsG0380014541.01.T01:CDS
ACAGGGATGATAGAGATCAA+GGG 0.654179 3:-56251974 MsG0380014541.01.T01:CDS
GTGGTGTTGTTGGAAACGAT+GGG 0.657083 3:-56253207 MsG0380014541.01.T01:CDS
CTGAGGATGCATCATCGGCG+GGG 0.661013 3:+56252445 None:intergenic
ATCAGACCATCAGTATGGTG+AGG 0.661084 3:-56252087 MsG0380014541.01.T01:CDS
GGCTGGAGAGTCAAGTTATG+GGG 0.661634 3:-56252120 MsG0380014541.01.T01:CDS
TTTATGATGAGAAAGCTAGT+GGG 0.669485 3:-56252937 MsG0380014541.01.T01:CDS
TCAGAATCAAGGGTTTAGAG+GGG 0.672081 3:-56253404 MsG0380014541.01.T01:CDS
AGTGAAATTGAGGAACAGAG+AGG 0.674116 3:-56253307 MsG0380014541.01.T01:CDS
GAACCACCTCTCTATCATCA+CGG 0.674265 3:+56251886 None:intergenic
GTTGCAATATTACTACCACC+AGG 0.675761 3:+56252680 None:intergenic
GCACCGTGATGATAGAGAGG+TGG 0.675962 3:-56251889 MsG0380014541.01.T01:CDS
TGGAGAGTCAAGTTATGGGG+AGG 0.676940 3:-56252117 MsG0380014541.01.T01:CDS
GGCATCATCCCCGAGAACGG+AGG 0.679431 3:+56252335 None:intergenic
TGGGTGGCAGAATAATATGA+GGG 0.682915 3:-56252048 MsG0380014541.01.T01:CDS
TGGCCGGATCCAAATATGGG+CGG 0.683016 3:-56252173 MsG0380014541.01.T01:CDS
GGATGCCTGTGAATGGAATG+GGG 0.684718 3:-56252238 MsG0380014541.01.T01:CDS
CAGGTGAACCAAACTGCCGG+TGG 0.686986 3:-56252749 MsG0380014541.01.T01:CDS
GGTAGTAATATTGCAACTGG+CGG 0.689669 3:-56252674 MsG0380014541.01.T01:CDS
CAAGGGAAAGTATTACTCAG+AGG 0.692157 3:+56251599 None:intergenic
GATGTGGGAGCTAAGCCTGG+TGG 0.699785 3:-56252695 MsG0380014541.01.T01:CDS
ACTGGCGGTAATTATCAAGG+TGG 0.714404 3:-56252659 MsG0380014541.01.T01:CDS
ATGGTCCTAATATGGGAATG+TGG 0.718453 3:-56252193 MsG0380014541.01.T01:CDS
ATGCTGATTATGGAAAGAGG+AGG 0.719817 3:-56251629 MsG0380014541.01.T01:CDS
CAGCAACAGCAACAACATGG+TGG 0.735849 3:-56253226 MsG0380014541.01.T01:CDS
AATCCGATGAGAAATAGGGG+TGG 0.741100 3:-56252533 MsG0380014541.01.T01:CDS
TGAATCCTGATAGAGCTGGG+TGG 0.774886 3:-56252064 MsG0380014541.01.T01:CDS
TTGGTGAGACAAGTTCCAAG+TGG 0.780474 3:-56253184 MsG0380014541.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATAATAATAACAATAG+AGG - Chr3:56252703-56252722 MsG0380014541.01.T01:CDS 15.0%
!! AATAATAACAATAGAGGTTA+TGG - Chr3:56252709-56252728 MsG0380014541.01.T01:CDS 20.0%
! ATAGCAATAACATTATTTCC+AGG + Chr3:56252211-56252230 None:intergenic 25.0%
! GGAAATAATGTTATTGCTAT+TGG - Chr3:56252211-56252230 MsG0380014541.01.T01:CDS 25.0%
!! AATAATGTTATTGCTATTGG+TGG - Chr3:56252214-56252233 MsG0380014541.01.T01:CDS 25.0%
!! CCTTTTACTGTTAAGAAAAT+GGG - Chr3:56252523-56252542 MsG0380014541.01.T01:CDS 25.0%
AATATGAGGGAAAAAGATAG+AGG - Chr3:56253285-56253304 MsG0380014541.01.T01:CDS 30.0%
ATGAATGGTCATTCGTTTAA+TGG - Chr3:56252472-56252491 MsG0380014541.01.T01:CDS 30.0%
CAGTAAATCAAGATTATCAC+AGG - Chr3:56253641-56253660 MsG0380014541.01.T01:CDS 30.0%
CTTTACAACGATGTTAATGT+TGG - Chr3:56251725-56251744 MsG0380014541.01.T01:CDS 30.0%
TCAGAATAATAGGAATCAAC+AGG - Chr3:56252552-56252571 MsG0380014541.01.T01:CDS 30.0%
TGAATGGTCATTCGTTTAAT+GGG - Chr3:56252473-56252492 MsG0380014541.01.T01:CDS 30.0%
TTTATGATGAGAAAGCTAGT+GGG - Chr3:56252383-56252402 MsG0380014541.01.T01:CDS 30.0%
! CCCATTTTCTTAACAGTAAA+AGG + Chr3:56252526-56252545 None:intergenic 30.0%
! GCCTTTTACTGTTAAGAAAA+TGG - Chr3:56252522-56252541 MsG0380014541.01.T01:CDS 30.0%
! TTTTATGATGAGAAAGCTAG+TGG - Chr3:56252382-56252401 MsG0380014541.01.T01:CDS 30.0%
!! AGGAAGTACTTTGTTATTTG+TGG - Chr3:56252282-56252301 MsG0380014541.01.T01:CDS 30.0%
!! ATAATTGGTAATGGTGGAAA+TGG - Chr3:56252829-56252848 MsG0380014541.01.T01:CDS 30.0%
!! GGAAGTACTTTGTTATTTGT+GGG - Chr3:56252283-56252302 MsG0380014541.01.T01:CDS 30.0%
AAAAAGATAGAGGATCCGAA+AGG - Chr3:56253295-56253314 MsG0380014541.01.T01:CDS 35.0%
AAAAAGGCAGGATTAACATG+AGG + Chr3:56253054-56253073 None:intergenic 35.0%
AAAAGATAGAGGATCCGAAA+GGG - Chr3:56253296-56253315 MsG0380014541.01.T01:CDS 35.0%
AACAATAGAGGTTATGGAAG+AGG - Chr3:56252715-56252734 MsG0380014541.01.T01:CDS 35.0%
ACAGATATGCTGATCATCAT+AGG - Chr3:56253556-56253575 MsG0380014541.01.T01:CDS 35.0%
AGGTTATGGAAGAGGTAATT+GGG - Chr3:56252723-56252742 MsG0380014541.01.T01:CDS 35.0%
ATCAAGATTATCACAGGATG+AGG - Chr3:56253647-56253666 MsG0380014541.01.T01:CDS 35.0%
CCTCAGCAAATTATGAATCA+GGG - Chr3:56252892-56252911 MsG0380014541.01.T01:CDS 35.0%
GTAATTATCAAGGTGGAGAT+GGG - Chr3:56252668-56252687 MsG0380014541.01.T01:CDS 35.0%
GTTAATCTTAATAGGGTTGG+AGG - Chr3:56252178-56252197 MsG0380014541.01.T01:CDS 35.0%
TCCTCAGCAAATTATGAATC+AGG - Chr3:56252891-56252910 MsG0380014541.01.T01:CDS 35.0%
TGATGAGAAGAAGGTTCAAT+CGG - Chr3:56251808-56251827 MsG0380014541.01.T01:CDS 35.0%
TGGAGGGGTTAATCTTAATA+GGG - Chr3:56252171-56252190 MsG0380014541.01.T01:CDS 35.0%
TGGGAAATTGAGTGAAATTG+AGG - Chr3:56252003-56252022 MsG0380014541.01.T01:CDS 35.0%
TGTCAATCCGATGAGAAATA+GGG - Chr3:56252783-56252802 MsG0380014541.01.T01:CDS 35.0%
TTCAGAATCAAGGGTTTAGA+GGG - Chr3:56251915-56251934 MsG0380014541.01.T01:CDS 35.0%
TTGAATTAGGTCAAGCATCT+GGG - Chr3:56251984-56252003 MsG0380014541.01.T01:CDS 35.0%
TTGAGGAAGAATGATGATTC+AGG - Chr3:56251767-56251786 MsG0380014541.01.T01:CDS 35.0%
TTTCAGAATCAAGGGTTTAG+AGG - Chr3:56251914-56251933 MsG0380014541.01.T01:CDS 35.0%
TTTCTGGGTTTCAGAATCAA+GGG - Chr3:56251906-56251925 MsG0380014541.01.T01:CDS 35.0%
! AACGATGTTAATGTTGGTGA+GGG - Chr3:56251731-56251750 MsG0380014541.01.T01:CDS 35.0%
! AAGATGCTGATTATGGAAAG+AGG - Chr3:56253688-56253707 MsG0380014541.01.T01:CDS 35.0%
! AATGTTATTGCTATTGGTGG+TGG - Chr3:56252217-56252236 MsG0380014541.01.T01:CDS 35.0%
! AGGTCAAAAGATGCTGATTA+TGG - Chr3:56253681-56253700 MsG0380014541.01.T01:CDS 35.0%
! ATAGGTGGTAGAGGTATAAT+TGG - Chr3:56252814-56252833 MsG0380014541.01.T01:CDS 35.0%
! GGTAGAGGTATAATTGGTAA+TGG - Chr3:56252820-56252839 MsG0380014541.01.T01:CDS 35.0%
! TATTTGTGGGTGATTTGCAT+TGG - Chr3:56252296-56252315 MsG0380014541.01.T01:CDS 35.0%
! TTGATGAATCTAGGGTTTCT+GGG - Chr3:56251891-56251910 MsG0380014541.01.T01:CDS 35.0%
!! AGAGGTATAATTGGTAATGG+TGG - Chr3:56252823-56252842 MsG0380014541.01.T01:CDS 35.0%
!! TGTTGGTGTTGATGAATCTA+GGG - Chr3:56251883-56251902 MsG0380014541.01.T01:CDS 35.0%
!!! CATGTTAATCCTGCCTTTTT+TGG - Chr3:56253054-56253073 MsG0380014541.01.T01:CDS 35.0%
!!! TTGTCAGGTTGAGTTTTATG+AGG - Chr3:56252420-56252439 MsG0380014541.01.T01:CDS 35.0%
AAAGCTAGTGGGAAATCCAA+AGG - Chr3:56252394-56252413 MsG0380014541.01.T01:CDS 40.0%
AAATTGAGGAACAGAGAGGT+GGG - Chr3:56252017-56252036 MsG0380014541.01.T01:CDS 40.0%
AAGCTAGTGGGAAATCCAAA+GGG - Chr3:56252395-56252414 MsG0380014541.01.T01:CDS 40.0%
ACAGGGATGATAGAGATCAA+GGG - Chr3:56253346-56253365 MsG0380014541.01.T01:CDS 40.0%
AGGAAGAATGATGATTCAGG+TGG - Chr3:56251770-56251789 MsG0380014541.01.T01:CDS 40.0%
AGTGAAATTGAGGAACAGAG+AGG - Chr3:56252013-56252032 MsG0380014541.01.T01:CDS 40.0%
ATATCTGCTGTAGCTGATGA+TGG - Chr3:56251668-56251687 MsG0380014541.01.T01:CDS 40.0%
ATGCAAGTATGGACAAGTGA+AGG - Chr3:56252351-56252370 MsG0380014541.01.T01:CDS 40.0%
ATGGTCATTCGTTTAATGGG+AGG - Chr3:56252476-56252495 MsG0380014541.01.T01:CDS 40.0%
ATGGTCCTAATATGGGAATG+TGG - Chr3:56253127-56253146 MsG0380014541.01.T01:CDS 40.0%
ATTCAGGTGGTAGAATTGAG+GGG - Chr3:56251783-56251802 MsG0380014541.01.T01:CDS 40.0%
CAACGATGTTAATGTTGGTG+AGG - Chr3:56251730-56251749 MsG0380014541.01.T01:CDS 40.0%
CAGCAGATATAGCTTCGTTA+CGG + Chr3:56251658-56251677 None:intergenic 40.0%
CTGTCAATCCGATGAGAAAT+AGG - Chr3:56252782-56252801 MsG0380014541.01.T01:CDS 40.0%
CTTAATAGGGTTGGAGGAAA+TGG - Chr3:56252184-56252203 MsG0380014541.01.T01:CDS 40.0%
GAAGCTGAGTTATGCAAGTA+TGG - Chr3:56252340-56252359 MsG0380014541.01.T01:CDS 40.0%
GAGGTTATGGAAGAGGTAAT+TGG - Chr3:56252722-56252741 MsG0380014541.01.T01:CDS 40.0%
GATGAGAAGAAGGTTCAATC+GGG - Chr3:56251809-56251828 MsG0380014541.01.T01:CDS 40.0%
GATTCAGGTGGTAGAATTGA+GGG - Chr3:56251782-56251801 MsG0380014541.01.T01:CDS 40.0%
GGGGTTAATCTTAATAGGGT+TGG - Chr3:56252175-56252194 MsG0380014541.01.T01:CDS 40.0%
GGTAATTATCAAGGTGGAGA+TGG - Chr3:56252667-56252686 MsG0380014541.01.T01:CDS 40.0%
GGTAGTAATATTGCAACTGG+CGG - Chr3:56252646-56252665 MsG0380014541.01.T01:CDS 40.0%
GGTATGGATGGTCCTAATAT+GGG - Chr3:56253120-56253139 MsG0380014541.01.T01:CDS 40.0%
GGTGGAATTAGGGTTGAATT+AGG - Chr3:56251971-56251990 MsG0380014541.01.T01:CDS 40.0%
GGTGGTAGTAATATTGCAAC+TGG - Chr3:56252643-56252662 MsG0380014541.01.T01:CDS 40.0%
GGTTATGGAAGAGGTAATTG+GGG - Chr3:56252724-56252743 MsG0380014541.01.T01:CDS 40.0%
GTCAATCCGATGAGAAATAG+GGG - Chr3:56252784-56252803 MsG0380014541.01.T01:CDS 40.0%
GTGGAGGGGTTAATCTTAAT+AGG - Chr3:56252170-56252189 MsG0380014541.01.T01:CDS 40.0%
GTTGAATTAGGTCAAGCATC+TGG - Chr3:56251983-56252002 MsG0380014541.01.T01:CDS 40.0%
GTTGCAATATTACTACCACC+AGG + Chr3:56252643-56252662 None:intergenic 40.0%
TACAGGGATGATAGAGATCA+AGG - Chr3:56253345-56253364 MsG0380014541.01.T01:CDS 40.0%
TACTGTTAAGAAAATGGGCG+AGG - Chr3:56252528-56252547 MsG0380014541.01.T01:CDS 40.0%
TCAGAATCAAGGGTTTAGAG+GGG - Chr3:56251916-56251935 MsG0380014541.01.T01:CDS 40.0%
TGATTCAGGTGGTAGAATTG+AGG - Chr3:56251781-56251800 MsG0380014541.01.T01:CDS 40.0%
TGGGTGGCAGAATAATATGA+GGG - Chr3:56253272-56253291 MsG0380014541.01.T01:CDS 40.0%
! AATGATGGTGTTGGAGTTCA+GGG - Chr3:56252040-56252059 MsG0380014541.01.T01:CDS 40.0%
! AATGGATTTGGACAGGGTAT+TGG - Chr3:56252847-56252866 MsG0380014541.01.T01:CDS 40.0%
! AGGGTTTTCTTCAATCGTTG+AGG - Chr3:56251750-56251769 MsG0380014541.01.T01:CDS 40.0%
! ATGCTGATTATGGAAAGAGG+AGG - Chr3:56253691-56253710 MsG0380014541.01.T01:CDS 40.0%
! ATTTGCTGAGGATGCATCAT+CGG + Chr3:56252883-56252902 None:intergenic 40.0%
! CAGCATCTTTTGACCTAGAA+TGG + Chr3:56253677-56253696 None:intergenic 40.0%
! CTATTTCTCATCGGATTGAC+AGG + Chr3:56252784-56252803 None:intergenic 40.0%
! GGTAATGGTGGAAATGGATT+TGG - Chr3:56252835-56252854 MsG0380014541.01.T01:CDS 40.0%
! GTTGATGAATCTAGGGTTTC+TGG - Chr3:56251890-56251909 MsG0380014541.01.T01:CDS 40.0%
! GTTTCTGGGTTTCAGAATCA+AGG - Chr3:56251905-56251924 MsG0380014541.01.T01:CDS 40.0%
!! CCCTGATTCATAATTTGCTG+AGG + Chr3:56252895-56252914 None:intergenic 40.0%
!! GAAATCCAAAGGGTATTGTC+AGG - Chr3:56252405-56252424 MsG0380014541.01.T01:CDS 40.0%
!! GTGTTGGTGTTGATGAATCT+AGG - Chr3:56251882-56251901 MsG0380014541.01.T01:CDS 40.0%
!!! AATCCTGCCTTTTTTGGAAG+AGG - Chr3:56253060-56253079 MsG0380014541.01.T01:CDS 40.0%
!!! ATCCTGCCTTTTTTGGAAGA+GGG - Chr3:56253061-56253080 MsG0380014541.01.T01:CDS 40.0%
AAGAAGGTTCAATCGGGTTC+GGG - Chr3:56251815-56251834 MsG0380014541.01.T01:CDS 45.0%
AATCCGATGAGAAATAGGGG+TGG - Chr3:56252787-56252806 MsG0380014541.01.T01:CDS 45.0%
AATGTGGCCGGATCCAAATA+TGG - Chr3:56253143-56253162 MsG0380014541.01.T01:CDS 45.0%
ACCATTCATCCCTTCCTTAC+AGG + Chr3:56252461-56252480 None:intergenic 45.0%
ACTGGCGGTAATTATCAAGG+TGG - Chr3:56252661-56252680 MsG0380014541.01.T01:CDS 45.0%
AGAATCAAGGGTTTAGAGGG+GGG - Chr3:56251918-56251937 MsG0380014541.01.T01:CDS 45.0%
AGAGGGAACAATCCTGGTAT+GGG - Chr3:56252748-56252767 MsG0380014541.01.T01:CDS 45.0%
AGGATGAGGAACACCATTCT+AGG - Chr3:56253661-56253680 MsG0380014541.01.T01:CDS 45.0%
AGGCATCCCTCTTCCAAAAA+AGG + Chr3:56253070-56253089 None:intergenic 45.0%
AGGTGAATCCTGATAGAGCT+GGG - Chr3:56253253-56253272 MsG0380014541.01.T01:CDS 45.0%
ATATGCTGCAACTGCCTGTA+AGG - Chr3:56252444-56252463 MsG0380014541.01.T01:CDS 45.0%
ATCAGACCATCAGTATGGTG+AGG - Chr3:56253233-56253252 MsG0380014541.01.T01:CDS 45.0%
ATCATCCCCATTCCATTCAC+AGG + Chr3:56253090-56253109 None:intergenic 45.0%
ATCCCTCTTCCAAAAAAGGC+AGG + Chr3:56253066-56253085 None:intergenic 45.0%
ATGCCTCAATTTCCTGGTGT+TGG - Chr3:56253003-56253022 MsG0380014541.01.T01:CDS 45.0%
ATGTGGCCGGATCCAAATAT+GGG - Chr3:56253144-56253163 MsG0380014541.01.T01:CDS 45.0%
CAAGTATGGACAAGTGAAGG+AGG - Chr3:56252354-56252373 MsG0380014541.01.T01:CDS 45.0%
CAGAATCAAGGGTTTAGAGG+GGG - Chr3:56251917-56251936 MsG0380014541.01.T01:CDS 45.0%
CAGATATAGCTTCGTTACGG+TGG + Chr3:56251655-56251674 None:intergenic 45.0%
CTCAACCTGACAATACCCTT+TGG + Chr3:56252413-56252432 None:intergenic 45.0%
CTGATTATGGAAAGAGGAGG+CGG - Chr3:56253694-56253713 MsG0380014541.01.T01:CDS 45.0%
CTGGGTGGCAGAATAATATG+AGG - Chr3:56253271-56253290 MsG0380014541.01.T01:CDS 45.0%
GAAATTGAGGAACAGAGAGG+TGG - Chr3:56252016-56252035 MsG0380014541.01.T01:CDS 45.0%
GAACCACCTCTCTATCATCA+CGG + Chr3:56253437-56253456 None:intergenic 45.0%
GAAGAAGGTTCAATCGGGTT+CGG - Chr3:56251814-56251833 MsG0380014541.01.T01:CDS 45.0%
GAAGAGGTAATTGGGGTAGA+GGG - Chr3:56252731-56252750 MsG0380014541.01.T01:CDS 45.0%
GACGCAAAAGCAACAACACA+CGG + Chr3:56252502-56252521 None:intergenic 45.0%
GATTCACCTCACCATACTGA+TGG + Chr3:56253242-56253261 None:intergenic 45.0%
GCAACTGGCGGTAATTATCA+AGG - Chr3:56252658-56252677 MsG0380014541.01.T01:CDS 45.0%
GCACCTAGAGAAAAAGATGC+CGG - Chr3:56253381-56253400 MsG0380014541.01.T01:CDS 45.0%
GGACAGATACAGGGAAGATA+GGG - Chr3:56253533-56253552 MsG0380014541.01.T01:CDS 45.0%
GGGTATGGATGGTCCTAATA+TGG - Chr3:56253119-56253138 MsG0380014541.01.T01:CDS 45.0%
TAGAGGGAACAATCCTGGTA+TGG - Chr3:56252747-56252766 MsG0380014541.01.T01:CDS 45.0%
TCATCACGGTGCTTTCTTTC+TGG + Chr3:56253423-56253442 None:intergenic 45.0%
TCCTAATATGGGAATGTGGC+CGG - Chr3:56253131-56253150 MsG0380014541.01.T01:CDS 45.0%
TGTTGTTGGAAACGATGGGT+TGG - Chr3:56252117-56252136 MsG0380014541.01.T01:CDS 45.0%
TTACGGTGGAACTGATCCAT+AGG + Chr3:56251641-56251660 None:intergenic 45.0%
TTCAGGTGGTAGAATTGAGG+GGG - Chr3:56251784-56251803 MsG0380014541.01.T01:CDS 45.0%
TTGGTGAGACAAGTTCCAAG+TGG - Chr3:56252136-56252155 MsG0380014541.01.T01:CDS 45.0%
! ATGATGGTGTTGGAGTTCAG+GGG - Chr3:56252041-56252060 MsG0380014541.01.T01:CDS 45.0%
! GAATGATGGTGTTGGAGTTC+AGG - Chr3:56252039-56252058 MsG0380014541.01.T01:CDS 45.0%
! GGTGGAAATGGATTTGGACA+GGG - Chr3:56252841-56252860 MsG0380014541.01.T01:CDS 45.0%
! TGCTTTCTTTCTGGCCATTC+AGG + Chr3:56253414-56253433 None:intergenic 45.0%
! TGGTGGAAATGGATTTGGAC+AGG - Chr3:56252840-56252859 MsG0380014541.01.T01:CDS 45.0%
! TGTCCGGCATCTTTTTCTCT+AGG + Chr3:56253387-56253406 None:intergenic 45.0%
! TTCTTCTGAGCGAAGGTACA+GGG - Chr3:56253329-56253348 MsG0380014541.01.T01:CDS 45.0%
! TTGTGGGTGATTTGCATTGG+TGG - Chr3:56252299-56252318 MsG0380014541.01.T01:CDS 45.0%
!! AAAGCACCGTGATGATAGAG+AGG - Chr3:56253428-56253447 MsG0380014541.01.T01:CDS 45.0%
!! CAACAACATGGTGGTGTTGT+TGG - Chr3:56252103-56252122 MsG0380014541.01.T01:CDS 45.0%
!! CAAGTTCCAAGTGGTGTTGT+TGG - Chr3:56252145-56252164 MsG0380014541.01.T01:CDS 45.0%
!! CAGGGTTTTGATCCTGCATT+TGG - Chr3:56252910-56252929 MsG0380014541.01.T01:CDS 45.0%
!! GGTTTTGATCCTGCATTTGG+TGG - Chr3:56252913-56252932 MsG0380014541.01.T01:CDS 45.0%
!! GTGGTGTTGTTGGAAACGAT+GGG - Chr3:56252113-56252132 MsG0380014541.01.T01:CDS 45.0%
!! GTTATTGCTATTGGTGGTGG+AGG - Chr3:56252220-56252239 MsG0380014541.01.T01:CDS 45.0%
!! TTAACATGAGGTGCTACTCC+AGG + Chr3:56253042-56253061 None:intergenic 45.0%
AAACCAACACCTCCAACACC+AGG + Chr3:56253018-56253037 None:intergenic 50.0%
AAAGCCTGCCATTCTACCCA+TGG + Chr3:56252941-56252960 None:intergenic 50.0%
AACCAGAGCATGATGAGGAG+TGG - Chr3:56253592-56253611 MsG0380014541.01.T01:CDS 50.0%
AACCCTAATTCCACCACCAC+CGG + Chr3:56251966-56251985 None:intergenic 50.0%
AAGCCTGCCATTCTACCCAT+GGG + Chr3:56252940-56252959 None:intergenic 50.0%
AATCCTGGTATGGGTGGTAG+AGG - Chr3:56252757-56252776 MsG0380014541.01.T01:CDS 50.0%
AATGGGGATGATGCCCCAAT+CGG - Chr3:56253098-56253117 MsG0380014541.01.T01:CDS 50.0%
ACCAGAGCATGATGAGGAGT+GGG - Chr3:56253593-56253612 MsG0380014541.01.T01:CDS 50.0%
AGGACCATCCATACCCGATT+GGG + Chr3:56253115-56253134 None:intergenic 50.0%
AGGGATGCCTGTGAATGGAA+TGG - Chr3:56253080-56253099 MsG0380014541.01.T01:CDS 50.0%
AGGGCTGGAGAGTCAAGTTA+TGG - Chr3:56253198-56253217 MsG0380014541.01.T01:CDS 50.0%
ATAGAGGATCCGAAAGGGAC+TGG - Chr3:56253301-56253320 MsG0380014541.01.T01:CDS 50.0%
ATGCCGGACATGATCCTGAA+TGG - Chr3:56253397-56253416 MsG0380014541.01.T01:CDS 50.0%
ATGGACAAGTGAAGGAGGTG+AGG - Chr3:56252359-56252378 MsG0380014541.01.T01:CDS 50.0%
ATGGATGAAGCTGGTGAGAG+TGG - Chr3:56251611-56251630 MsG0380014541.01.T01:CDS 50.0%
ATGGGTAGAATGGCAGGCTT+TGG - Chr3:56252940-56252959 MsG0380014541.01.T01:CDS 50.0%
CAACAGGTGAACCAAACTGC+CGG - Chr3:56252568-56252587 MsG0380014541.01.T01:CDS 50.0%
CAGCAACAGCAACAACATGG+TGG - Chr3:56252094-56252113 MsG0380014541.01.T01:CDS 50.0%
CAGCAGCAACAGCAACAACA+TGG - Chr3:56252091-56252110 MsG0380014541.01.T01:CDS 50.0%
CATCCGCCCATATTTGGATC+CGG + Chr3:56253153-56253172 None:intergenic 50.0%
CCTCCAACACCAGGAAATTG+AGG + Chr3:56253009-56253028 None:intergenic 50.0%
CGATGAGAAATAGGGGTGGT+GGG - Chr3:56252791-56252810 MsG0380014541.01.T01:CDS 50.0%
CTGCAACTGCCTGTAAGGAA+GGG - Chr3:56252449-56252468 MsG0380014541.01.T01:CDS 50.0%
GAACAGAGAGGTGGGAATGA+TGG - Chr3:56252025-56252044 MsG0380014541.01.T01:CDS 50.0%
GAGGTGAATCCTGATAGAGC+TGG - Chr3:56253252-56253271 MsG0380014541.01.T01:CDS 50.0%
GATCCAAATATGGGCGGATG+GGG - Chr3:56253153-56253172 MsG0380014541.01.T01:CDS 50.0%
GCAGCATCAGACCATCAGTA+TGG - Chr3:56253228-56253247 MsG0380014541.01.T01:CDS 50.0%
GCCTGTAAGGAAGGGATGAA+TGG - Chr3:56252457-56252476 MsG0380014541.01.T01:CDS 50.0%
GGAAGAGGTAATTGGGGTAG+AGG - Chr3:56252730-56252749 MsG0380014541.01.T01:CDS 50.0%
GGATCCAAATATGGGCGGAT+GGG - Chr3:56253152-56253171 MsG0380014541.01.T01:CDS 50.0%
GGATGCCTGTGAATGGAATG+GGG - Chr3:56253082-56253101 MsG0380014541.01.T01:CDS 50.0%
GGCTGGAGAGTCAAGTTATG+GGG - Chr3:56253200-56253219 MsG0380014541.01.T01:CDS 50.0%
GGGACAGATACAGGGAAGAT+AGG - Chr3:56253532-56253551 MsG0380014541.01.T01:CDS 50.0%
GGGATGATGCCTCAATTTCC+TGG - Chr3:56252997-56253016 MsG0380014541.01.T01:CDS 50.0%
GGGATGCCTGTGAATGGAAT+GGG - Chr3:56253081-56253100 MsG0380014541.01.T01:CDS 50.0%
GGGCTGGAGAGTCAAGTTAT+GGG - Chr3:56253199-56253218 MsG0380014541.01.T01:CDS 50.0%
GTACCTTCGCTCAGAAGAAC+CGG + Chr3:56253328-56253347 None:intergenic 50.0%
TAGGACCATCCATACCCGAT+TGG + Chr3:56253116-56253135 None:intergenic 50.0%
TCACCAACAACACCAACCAC+CGG + Chr3:56251851-56251870 None:intergenic 50.0%
TCCGGCCACATTCCCATATT+AGG + Chr3:56253135-56253154 None:intergenic 50.0%
TGAATCCTGATAGAGCTGGG+TGG - Chr3:56253256-56253275 MsG0380014541.01.T01:CDS 50.0%
TGGAGAGTCAAGTTATGGGG+AGG - Chr3:56253203-56253222 MsG0380014541.01.T01:CDS 50.0%
TGGCCATTCAGGATCATGTC+CGG + Chr3:56253403-56253422 None:intergenic 50.0%
TGGGCGAGGCTCAGAATAAT+AGG - Chr3:56252542-56252561 MsG0380014541.01.T01:CDS 50.0%
TGGTGAGAGTGGAGATCCTA+TGG - Chr3:56251622-56251641 MsG0380014541.01.T01:CDS 50.0%
! AGAGGTGGGAATGATGGTGT+TGG - Chr3:56252031-56252050 MsG0380014541.01.T01:CDS 50.0%
! CCACCACCCCTATTTCTCAT+CGG + Chr3:56252793-56252812 None:intergenic 50.0%
! CCTCAATTTCCTGGTGTTGG+AGG - Chr3:56253006-56253025 MsG0380014541.01.T01:CDS 50.0%
! CCTCATCATGCTCTGGTTCA+CGG + Chr3:56253590-56253609 None:intergenic 50.0%
! GTTCTTCTGAGCGAAGGTAC+AGG - Chr3:56253328-56253347 MsG0380014541.01.T01:CDS 50.0%
! TTTCCTGGTGTTGGAGGTGT+TGG - Chr3:56253012-56253031 MsG0380014541.01.T01:CDS 50.0%
!! AGAAATAGGGGTGGTGGGAT+AGG - Chr3:56252796-56252815 MsG0380014541.01.T01:CDS 50.0%
!! ATTGCTATTGGTGGTGGAGG+AGG - Chr3:56252223-56252242 MsG0380014541.01.T01:CDS 50.0%
!! GGGAATTCTGGAGTTGGATC+GGG - Chr3:56251938-56251957 MsG0380014541.01.T01:CDS 50.0%
!! GGGGAATTCTGGAGTTGGAT+CGG - Chr3:56251937-56251956 MsG0380014541.01.T01:CDS 50.0%
!! GGTGGTGTTGTTGGAAACGA+TGG - Chr3:56252112-56252131 MsG0380014541.01.T01:CDS 50.0%
!! GTGGTTGGTGTTGTTGGTGA+GGG - Chr3:56251851-56251870 MsG0380014541.01.T01:CDS 50.0%
!! GTTCCAAGTGGTGTTGTTGG+TGG - Chr3:56252148-56252167 MsG0380014541.01.T01:CDS 50.0%
!! TACCGGTGGTGGTGGAATTA+GGG - Chr3:56251961-56251980 MsG0380014541.01.T01:CDS 50.0%
!! TGAGGGGGTTGATGAGAAGA+AGG - Chr3:56251799-56251818 MsG0380014541.01.T01:CDS 50.0%
AACGATCACGTGACCGTGGT+CGG - Chr3:56253460-56253479 MsG0380014541.01.T01:CDS 55.0%
AGAACCGGACCAGTCCCTTT+CGG + Chr3:56253313-56253332 None:intergenic 55.0%
AGCATGATGAGGAGTGGGAG+CGG - Chr3:56253598-56253617 MsG0380014541.01.T01:CDS 55.0%
AGGGTTGGAGGAAATGGACC+TGG - Chr3:56252190-56252209 MsG0380014541.01.T01:CDS 55.0%
ATCGTGAGCGGGACAGATAC+AGG - Chr3:56253523-56253542 MsG0380014541.01.T01:CDS 55.0%
ATGCCCCAATCGGGTATGGA+TGG - Chr3:56253108-56253127 MsG0380014541.01.T01:CDS 55.0%
ATGGGGATGATGCCCCAATC+GGG - Chr3:56253099-56253118 MsG0380014541.01.T01:CDS 55.0%
CCACCACCAACAACACCACT+TGG + Chr3:56252154-56252173 None:intergenic 55.0%
CCGATGAGAAATAGGGGTGG+TGG - Chr3:56252790-56252809 MsG0380014541.01.T01:CDS 55.0%
CCGTGAACCAGAGCATGATG+AGG - Chr3:56253587-56253606 MsG0380014541.01.T01:CDS 55.0%
CGGATCCAAATATGGGCGGA+TGG - Chr3:56253151-56253170 MsG0380014541.01.T01:CDS 55.0%
GATGATGCCCCAATCGGGTA+TGG - Chr3:56253104-56253123 MsG0380014541.01.T01:CDS 55.0%
GCACCGTGATGATAGAGAGG+TGG - Chr3:56253431-56253450 MsG0380014541.01.T01:CDS 55.0%
GCTGCAACTGCCTGTAAGGA+AGG - Chr3:56252448-56252467 MsG0380014541.01.T01:CDS 55.0%
GGAAGAGGGATGCCTGTGAA+TGG - Chr3:56253075-56253094 MsG0380014541.01.T01:CDS 55.0%
GGACCATCCATACCCGATTG+GGG + Chr3:56253114-56253133 None:intergenic 55.0%
GGGAACAATCCTGGTATGGG+TGG - Chr3:56252751-56252770 MsG0380014541.01.T01:CDS 55.0%
GGGTTTAGAGGGGGGAATTC+TGG - Chr3:56251926-56251945 MsG0380014541.01.T01:CDS 55.0%
TCAATCGGGTTCGGGTGTTC+AGG - Chr3:56251823-56251842 MsG0380014541.01.T01:CDS 55.0%
TCCCACTCCTCATCATGCTC+TGG + Chr3:56253597-56253616 None:intergenic 55.0%
TCGAGATCGTGAGCGCGAAA+GGG - Chr3:56253491-56253510 MsG0380014541.01.T01:CDS 55.0%
TCGTGAGCGGGACAGATACA+GGG - Chr3:56253524-56253543 MsG0380014541.01.T01:CDS 55.0%
TGAACCAAACTGCCGGTGGT+GGG - Chr3:56252575-56252594 MsG0380014541.01.T01:CDS 55.0%
TGCTGAGGATGCATCATCGG+CGG + Chr3:56252880-56252899 None:intergenic 55.0%
TGGCCGGATCCAAATATGGG+CGG - Chr3:56253147-56253166 MsG0380014541.01.T01:CDS 55.0%
TGGGGTAGAGGGAACAATCC+TGG - Chr3:56252742-56252761 MsG0380014541.01.T01:CDS 55.0%
TGGGGTTAACCCGGGAAGAA+GGG - Chr3:56252594-56252613 MsG0380014541.01.T01:CDS 55.0%
TGGTGGTCCCATGGGTAGAA+TGG - Chr3:56252930-56252949 MsG0380014541.01.T01:CDS 55.0%
TTCTGCCACCCAGCTCTATC+AGG + Chr3:56253264-56253283 None:intergenic 55.0%
! CCTGCATTTGGTGGTCCCAT+GGG - Chr3:56252922-56252941 MsG0380014541.01.T01:CDS 55.0%
! CTCGAGACTTTTCCCGACCA+CGG + Chr3:56253476-56253495 None:intergenic 55.0%
! GGTAGAATGGCAGGCTTTGG+AGG - Chr3:56252943-56252962 MsG0380014541.01.T01:CDS 55.0%
! GGTGAGGGAGTGAAGAGTGT+TGG - Chr3:56251866-56251885 MsG0380014541.01.T01:CDS 55.0%
! GTGGACTACTGATGCTGAGC+TGG - Chr3:56252318-56252337 MsG0380014541.01.T01:CDS 55.0%
! TCCTGCATTTGGTGGTCCCA+TGG - Chr3:56252921-56252940 MsG0380014541.01.T01:CDS 55.0%
! TCTGGAGTTGGATCGGGTAC+CGG - Chr3:56251944-56251963 MsG0380014541.01.T01:CDS 55.0%
! TGAGGCATCATCCCCGAGAA+CGG + Chr3:56252991-56253010 None:intergenic 55.0%
!! AATAGGGGTGGTGGGATAGG+TGG - Chr3:56252799-56252818 MsG0380014541.01.T01:CDS 55.0%
!! AGAGGGGGGAATTCTGGAGT+TGG - Chr3:56251932-56251951 MsG0380014541.01.T01:CDS 55.0%
!! AGTGGTGTTGTTGGTGGTGG+AGG - Chr3:56252154-56252173 MsG0380014541.01.T01:CDS 55.0%
!! ATTGGTGGTGGAGGAGGTGA+AGG - Chr3:56252229-56252248 MsG0380014541.01.T01:CDS 55.0%
!! CCAAGTGGTGTTGTTGGTGG+TGG - Chr3:56252151-56252170 MsG0380014541.01.T01:CDS 55.0%
!! GATCCGGTGGTTGGTGTTGT+TGG - Chr3:56251845-56251864 MsG0380014541.01.T01:CDS 55.0%
!! GGTGGTTGGTGTTGTTGGTG+AGG - Chr3:56251850-56251869 MsG0380014541.01.T01:CDS 55.0%
!! GTACCGGTGGTGGTGGAATT+AGG - Chr3:56251960-56251979 MsG0380014541.01.T01:CDS 55.0%
!! GTGGTGTTGTTGGTGGTGGA+GGG - Chr3:56252155-56252174 MsG0380014541.01.T01:CDS 55.0%
!! GTTGGAGGTGTTGGTTTGCC+TGG - Chr3:56253021-56253040 MsG0380014541.01.T01:CDS 55.0%
!! TGGTGTTGTTGGTGGTGGAG+GGG - Chr3:56252156-56252175 MsG0380014541.01.T01:CDS 55.0%
!! TTGGTGGTGGAGGAGGTGAA+GGG - Chr3:56252230-56252249 MsG0380014541.01.T01:CDS 55.0%
AAGAAGGGGGCCTGCTGATG+TGG - Chr3:56252609-56252628 MsG0380014541.01.T01:CDS 60.0%
ACGATCACGTGACCGTGGTC+GGG - Chr3:56253461-56253480 MsG0380014541.01.T01:CDS 60.0%
AGAAGGGGGCCTGCTGATGT+GGG - Chr3:56252610-56252629 MsG0380014541.01.T01:CDS 60.0%
AGATCGTGAGCGCGAAAGGG+GGG - Chr3:56253494-56253513 MsG0380014541.01.T01:CDS 60.0%
ATGATGAGGAGTGGGAGCGG+GGG - Chr3:56253601-56253620 MsG0380014541.01.T01:CDS 60.0%
CAGGTGAACCAAACTGCCGG+TGG - Chr3:56252571-56252590 MsG0380014541.01.T01:CDS 60.0%
CATGATGAGGAGTGGGAGCG+GGG - Chr3:56253600-56253619 MsG0380014541.01.T01:CDS 60.0%
CCAAATATGGGCGGATGGGG+TGG - Chr3:56253156-56253175 MsG0380014541.01.T01:CDS 60.0%
CCACCCCATCCGCCCATATT+TGG + Chr3:56253159-56253178 None:intergenic 60.0%
CCCATGGGACCACCAAATGC+AGG + Chr3:56252925-56252944 None:intergenic 60.0%
CGAGATCGTGAGCGCGAAAG+GGG - Chr3:56253492-56253511 MsG0380014541.01.T01:CDS 60.0%
CTCGAGATCGTGAGCGCGAA+AGG - Chr3:56253490-56253509 MsG0380014541.01.T01:CDS 60.0%
CTGAGGATGCATCATCGGCG+GGG + Chr3:56252878-56252897 None:intergenic 60.0%
GAACCAAACTGCCGGTGGTG+GGG - Chr3:56252576-56252595 MsG0380014541.01.T01:CDS 60.0%
GAGATCGTGAGCGCGAAAGG+GGG - Chr3:56253493-56253512 MsG0380014541.01.T01:CDS 60.0%
GATGTGGGAGCTAAGCCTGG+TGG - Chr3:56252625-56252644 MsG0380014541.01.T01:CDS 60.0%
GCATGATGAGGAGTGGGAGC+GGG - Chr3:56253599-56253618 MsG0380014541.01.T01:CDS 60.0%
GCTGAGGATGCATCATCGGC+GGG + Chr3:56252879-56252898 None:intergenic 60.0%
GCTGATGTGGGAGCTAAGCC+TGG - Chr3:56252622-56252641 MsG0380014541.01.T01:CDS 60.0%
GGCTTAGCTCCCACATCAGC+AGG + Chr3:56252622-56252641 None:intergenic 60.0%
GGGGTTAACCCGGGAAGAAG+GGG - Chr3:56252595-56252614 MsG0380014541.01.T01:CDS 60.0%
GGGTTAACCCGGGAAGAAGG+GGG - Chr3:56252596-56252615 MsG0380014541.01.T01:CDS 60.0%
GGGTTCGGGTGTTCAGGATC+CGG - Chr3:56251829-56251848 MsG0380014541.01.T01:CDS 60.0%
GGTCCCATGGGTAGAATGGC+AGG - Chr3:56252934-56252953 MsG0380014541.01.T01:CDS 60.0%
GGTCCGGTTCTTCTGAGCGA+AGG - Chr3:56253322-56253341 MsG0380014541.01.T01:CDS 60.0%
GGTCCTCTACCACCCATACC+AGG + Chr3:56252763-56252782 None:intergenic 60.0%
GGTGTTCAGGATCCGGTGGT+TGG - Chr3:56251836-56251855 MsG0380014541.01.T01:CDS 60.0%
GTGAACCAAACTGCCGGTGG+TGG - Chr3:56252574-56252593 MsG0380014541.01.T01:CDS 60.0%
GTGGGGTTAACCCGGGAAGA+AGG - Chr3:56252593-56252612 MsG0380014541.01.T01:CDS 60.0%
TAACCCCACCACCGGCAGTT+TGG + Chr3:56252582-56252601 None:intergenic 60.0%
TGGAGGCTATCCTGGTGGTC+CGG - Chr3:56252960-56252979 MsG0380014541.01.T01:CDS 60.0%
TTCGGGTGTTCAGGATCCGG+TGG - Chr3:56251832-56251851 MsG0380014541.01.T01:CDS 60.0%
!! GCAGGCTTTGGAGGCTATCC+TGG - Chr3:56252952-56252971 MsG0380014541.01.T01:CDS 60.0%
!! GGATCCGAAAGGGACTGGTC+CGG - Chr3:56253306-56253325 MsG0380014541.01.T01:CDS 60.0%
!! GGCTTTGGAGGCTATCCTGG+TGG - Chr3:56252955-56252974 MsG0380014541.01.T01:CDS 60.0%
!! GGTGGTGGGATAGGTGGTAG+AGG - Chr3:56252805-56252824 MsG0380014541.01.T01:CDS 60.0%
!! TGAGGAACCTGGTGGTGGCA+GGG - Chr3:56253179-56253198 MsG0380014541.01.T01:CDS 60.0%
!! TGGTGGTGGAGGAGGTGAAG+GGG - Chr3:56252231-56252250 MsG0380014541.01.T01:CDS 60.0%
CGCGAACGATCACGTGACCG+TGG - Chr3:56253456-56253475 MsG0380014541.01.T01:CDS 65.0%
GGATGGGGTGGTGAGGAACC+TGG - Chr3:56253168-56253187 MsG0380014541.01.T01:CDS 65.0%
GGCATCATCCCCGAGAACGG+AGG + Chr3:56252988-56253007 None:intergenic 65.0%
GGGGGATCGAGATCGTGAGC+GGG - Chr3:56253512-56253531 MsG0380014541.01.T01:CDS 65.0%
GGGGGGATCGAGATCGTGAG+CGG - Chr3:56253511-56253530 MsG0380014541.01.T01:CDS 65.0%
GGTGGTGAGGAACCTGGTGG+TGG - Chr3:56253174-56253193 MsG0380014541.01.T01:CDS 65.0%
TATGGGCGGATGGGGTGGTG+AGG - Chr3:56253161-56253180 MsG0380014541.01.T01:CDS 65.0%
TCAGCAGGCCCCCTTCTTCC+CGG + Chr3:56252607-56252626 None:intergenic 65.0%
TCCCGGGTTAACCCCACCAC+CGG + Chr3:56252590-56252609 None:intergenic 65.0%
TGGGGTGGTGAGGAACCTGG+TGG - Chr3:56253171-56253190 MsG0380014541.01.T01:CDS 65.0%
TGGTCCGGCACCTCCGTTCT+CGG - Chr3:56252975-56252994 MsG0380014541.01.T01:CDS 65.0%
! ATCCCCGAGAACGGAGGTGC+CGG + Chr3:56252982-56253001 None:intergenic 65.0%
! GGAGGTGAAGGGGGAGGTGT+TGG - Chr3:56252241-56252260 MsG0380014541.01.T01:CDS 65.0%
!! GAAGGGGGAGGTGTTGGTGG+TGG - Chr3:56252247-56252266 MsG0380014541.01.T01:CDS 65.0%
!! GGAGGTGTTGGTGGTGGAGG+AGG - Chr3:56252253-56252272 MsG0380014541.01.T01:CDS 65.0%
!! GGAGTTGGATCGGGTACCGG+TGG - Chr3:56251947-56251966 MsG0380014541.01.T01:CDS 65.0%
!! GGTGAAGGGGGAGGTGTTGG+TGG - Chr3:56252244-56252263 MsG0380014541.01.T01:CDS 65.0%
!! GGTGGTGGAGGAGGTGAAGG+GGG - Chr3:56252232-56252251 MsG0380014541.01.T01:CDS 65.0%
!! GGTGTTGGTGGTGGAGGAGG+TGG - Chr3:56252256-56252275 MsG0380014541.01.T01:CDS 65.0%
!! GTGAGGAACCTGGTGGTGGC+AGG - Chr3:56253178-56253197 MsG0380014541.01.T01:CDS 65.0%
!! GTTGGATCGGGTACCGGTGG+TGG - Chr3:56251950-56251969 MsG0380014541.01.T01:CDS 65.0%
!! GTTGGTGGTGGAGGAGGTGG+TGG - Chr3:56252259-56252278 MsG0380014541.01.T01:CDS 65.0%
!! TGCCGGTGGTGGGGTTAACC+CGG - Chr3:56252585-56252604 MsG0380014541.01.T01:CDS 65.0%
CAGCAGGCCCCCTTCTTCCC+GGG + Chr3:56252606-56252625 None:intergenic 70.0%
GGTCCGGCACCTCCGTTCTC+GGG - Chr3:56252976-56252995 MsG0380014541.01.T01:CDS 70.0%
GGTGGAGGAGGTGAAGGGGG+AGG - Chr3:56252235-56252254 MsG0380014541.01.T01:CDS 70.0%
GTCCGGCACCTCCGTTCTCG+GGG - Chr3:56252977-56252996 MsG0380014541.01.T01:CDS 70.0%
TCTCCAGCCCTGCCACCACC+AGG + Chr3:56253189-56253208 None:intergenic 70.0%
!! AACGGAGGTGCCGGACCACC+AGG + Chr3:56252973-56252992 None:intergenic 70.0%
!! GAACCTGGTGGTGGCAGGGC+TGG - Chr3:56253183-56253202 MsG0380014541.01.T01:CDS 70.0%
!! GCCGGTGGTGGGGTTAACCC+GGG - Chr3:56252586-56252605 MsG0380014541.01.T01:CDS 70.0%
!! GGATCGGGTACCGGTGGTGG+TGG - Chr3:56251953-56251972 MsG0380014541.01.T01:CDS 70.0%
!! GGGGGAGGTGTTGGTGGTGG+AGG - Chr3:56252250-56252269 MsG0380014541.01.T01:CDS 70.0%
!! GGTGGTGGAGGAGGTGGTGG+AGG - Chr3:56252262-56252281 MsG0380014541.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 56251611 56253731 56251611 ID=MsG0380014541.01;Name=MsG0380014541.01
Chr3 mRNA 56251611 56253731 56251611 ID=MsG0380014541.01.T01;Parent=MsG0380014541.01;Name=MsG0380014541.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|706
Chr3 exon 56251611 56253731 56251611 ID=MsG0380014541.01.T01:exon:18438;Parent=MsG0380014541.01.T01
Chr3 CDS 56251611 56253731 56251611 ID=MsG0380014541.01.T01:cds;Parent=MsG0380014541.01.T01
Gene Sequence

>MsG0380014541.01.T01

ATGGATGAAGCTGGTGAGAGTGGAGATCCTATGGATCAGTTCCACCGTAACGAAGCTATATCTGCTGTAGCTGATGATGGTTTCTTAGCTGAAGAAGATGATGATTATGAAGATCTTTACAACGATGTTAATGTTGGTGAGGGTTTTCTTCAATCGTTGAGGAAGAATGATGATTCAGGTGGTAGAATTGAGGGGGTTGATGAGAAGAAGGTTCAATCGGGTTCGGGTGTTCAGGATCCGGTGGTTGGTGTTGTTGGTGAGGGAGTGAAGAGTGTTGGTGTTGATGAATCTAGGGTTTCTGGGTTTCAGAATCAAGGGTTTAGAGGGGGGAATTCTGGAGTTGGATCGGGTACCGGTGGTGGTGGAATTAGGGTTGAATTAGGTCAAGCATCTGGGAAATTGAGTGAAATTGAGGAACAGAGAGGTGGGAATGATGGTGTTGGAGTTCAGGGGATTGTGCAGCAACAACAGCAACAGCAGCAGCAGCAACAGCAACAACATGGTGGTGTTGTTGGAAACGATGGGTTGGTGAGACAAGTTCCAAGTGGTGTTGTTGGTGGTGGAGGGGTTAATCTTAATAGGGTTGGAGGAAATGGACCTGGAAATAATGTTATTGCTATTGGTGGTGGAGGAGGTGAAGGGGGAGGTGTTGGTGGTGGAGGAGGTGGTGGAGGAAGTACTTTGTTATTTGTGGGTGATTTGCATTGGTGGACTACTGATGCTGAGCTGGAAGCTGAGTTATGCAAGTATGGACAAGTGAAGGAGGTGAGGTTTTATGATGAGAAAGCTAGTGGGAAATCCAAAGGGTATTGTCAGGTTGAGTTTTATGAGGCATATGCTGCAACTGCCTGTAAGGAAGGGATGAATGGTCATTCGTTTAATGGGAGGCCGTGTGTTGTTGCTTTTGCGTCGCCTTTTACTGTTAAGAAAATGGGCGAGGCTCAGAATAATAGGAATCAACAGGTGAACCAAACTGCCGGTGGTGGGGTTAACCCGGGAAGAAGGGGGCCTGCTGATGTGGGAGCTAAGCCTGGTGGTAGTAATATTGCAACTGGCGGTAATTATCAAGGTGGAGATGGGAATAATAATAATAACAATAATAATAACAATAGAGGTTATGGAAGAGGTAATTGGGGTAGAGGGAACAATCCTGGTATGGGTGGTAGAGGACCTGTCAATCCGATGAGAAATAGGGGTGGTGGGATAGGTGGTAGAGGTATAATTGGTAATGGTGGAAATGGATTTGGACAGGGTATTGGTGCTGCCCCGCCGATGATGCATCCTCAGCAAATTATGAATCAGGGTTTTGATCCTGCATTTGGTGGTCCCATGGGTAGAATGGCAGGCTTTGGAGGCTATCCTGGTGGTCCGGCACCTCCGTTCTCGGGGATGATGCCTCAATTTCCTGGTGTTGGAGGTGTTGGTTTGCCTGGAGTAGCACCTCATGTTAATCCTGCCTTTTTTGGAAGAGGGATGCCTGTGAATGGAATGGGGATGATGCCCCAATCGGGTATGGATGGTCCTAATATGGGAATGTGGCCGGATCCAAATATGGGCGGATGGGGTGGTGAGGAACCTGGTGGTGGCAGGGCTGGAGAGTCAAGTTATGGGGAGGAAGCAGCATCAGACCATCAGTATGGTGAGGTGAATCCTGATAGAGCTGGGTGGCAGAATAATATGAGGGAAAAAGATAGAGGATCCGAAAGGGACTGGTCCGGTTCTTCTGAGCGAAGGTACAGGGATGATAGAGATCAAGGGTATGAGAGAGATGCACCTAGAGAAAAAGATGCCGGACATGATCCTGAATGGCCAGAAAGAAAGCACCGTGATGATAGAGAGGTGGTTCGCGAACGATCACGTGACCGTGGTCGGGAAAAGTCTCGAGATCGTGAGCGCGAAAGGGGGGATCGAGATCGTGAGCGGGACAGATACAGGGAAGATAGGGACAGATATGCTGATCATCATAGGTACAGAGACCGTGAACCAGAGCATGATGAGGAGTGGGAGCGGGGGCGATCGTCTAGAACTCACAGTAAATCAAGATTATCACAGGATGAGGAACACCATTCTAGGTCAAAAGATGCTGATTATGGAAAGAGGAGGCGGCTGACCTCTGAGTAA

Protein sequence

>MsG0380014541.01.T01

MDEAGESGDPMDQFHRNEAISAVADDGFLAEEDDDYEDLYNDVNVGEGFLQSLRKNDDSGGRIEGVDEKKVQSGSGVQDPVVGVVGEGVKSVGVDESRVSGFQNQGFRGGNSGVGSGTGGGGIRVELGQASGKLSEIEEQRGGNDGVGVQGIVQQQQQQQQQQQQQHGGVVGNDGLVRQVPSGVVGGGGVNLNRVGGNGPGNNVIAIGGGGGEGGGVGGGGGGGGSTLLFVGDLHWWTTDAELEAELCKYGQVKEVRFYDEKASGKSKGYCQVEFYEAYAATACKEGMNGHSFNGRPCVVAFASPFTVKKMGEAQNNRNQQVNQTAGGGVNPGRRGPADVGAKPGGSNIATGGNYQGGDGNNNNNNNNNNRGYGRGNWGRGNNPGMGGRGPVNPMRNRGGGIGGRGIIGNGGNGFGQGIGAAPPMMHPQQIMNQGFDPAFGGPMGRMAGFGGYPGGPAPPFSGMMPQFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPQSGMDGPNMGMWPDPNMGGWGGEEPGGGRAGESSYGEEAASDHQYGEVNPDRAGWQNNMREKDRGSERDWSGSSERRYRDDRDQGYERDAPREKDAGHDPEWPERKHRDDREVVRERSRDRGREKSRDRERERGDRDRERDRYREDRDRYADHHRYRDREPEHDEEWERGRSSRTHSKSRLSQDEEHHSRSKDADYGKRRRLTSE*