AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021401.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021401.01.T01 MTR_4g069090 36.927 436 145 13 2 329 180 593 9.39e-55 192
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021401.01.T01 AT3G18860 44.311 167 63 3 2 160 183 327 4.92e-33 130
MsG0480021401.01.T01 AT3G18860 44.311 167 63 3 2 160 183 327 4.97e-33 130

Find 70 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCGGGATACAAAATTTA+TGG 0.116623 4:-57433970 MsG0480021401.01.T01:CDS
ACTACAGTTCTCTCAGATTA+TGG 0.178467 4:-57434765 MsG0480021401.01.T01:intron
TCAAATCGCCCTTCCTTTGA+TGG 0.307482 4:-57433681 MsG0480021401.01.T01:CDS
CTTGGCTGCGATGTCTGATT+TGG 0.312249 4:-57434909 MsG0480021401.01.T01:CDS
TACTGAAAATGCTATCTTCA+TGG 0.320629 4:-57430258 MsG0480021401.01.T01:CDS
GCATCTCAACTTTGGTGGTT+TGG 0.330358 4:-57429782 MsG0480021401.01.T01:CDS
CAGTGGTAGCGAAGATTGTT+TGG 0.344766 4:-57434656 MsG0480021401.01.T01:CDS
CTACAGTTCTCTCAGATTAT+GGG 0.367037 4:-57434764 MsG0480021401.01.T01:intron
GCTTTGACTCAAGCTCTTCC+TGG 0.367376 4:+57433871 None:intergenic
ATACAAAATTTATGGAAAAC+GGG 0.370087 4:-57433962 MsG0480021401.01.T01:CDS
TAGAGCATCCTCGTTCTGTT+CGG 0.372366 4:-57433986 MsG0480021401.01.T01:CDS
AGAGCATCCTCGTTCTGTTC+GGG 0.372645 4:-57433985 MsG0480021401.01.T01:CDS
CCGATGGATTAGTACGCATT+TGG 0.377324 4:-57433920 MsG0480021401.01.T01:CDS
TTCCTTTGATGGTGTTCAGC+AGG 0.386970 4:-57433670 MsG0480021401.01.T01:CDS
ACTTTGGTGGTTTGGACATG+TGG 0.443869 4:-57429774 MsG0480021401.01.T01:CDS
CTGAACAAACAGTTGCAGTA+TGG 0.447329 4:+57434707 None:intergenic
ATTCAATGGTCATCAGATAA+TGG 0.447507 4:-57434740 MsG0480021401.01.T01:CDS
TCAGTTGATTCACATGCATC+AGG 0.449667 4:-57434688 MsG0480021401.01.T01:CDS
ACCCATCATGGGATGCAGAT+AGG 0.452110 4:+57434883 None:intergenic
TGACAGTTCTTTATGATAGC+GGG 0.452404 4:-57430047 MsG0480021401.01.T01:CDS
GATACAAAATTTATGGAAAA+CGG 0.454016 4:-57433963 MsG0480021401.01.T01:CDS
CTCAGATTATGGGCATTCAA+TGG 0.463371 4:-57434754 MsG0480021401.01.T01:CDS
AGATGGTTGCATCTCAACTT+TGG 0.466136 4:-57429790 MsG0480021401.01.T01:CDS
GTATTATTATTGAGAAAAGA+TGG 0.469226 4:-57429807 MsG0480021401.01.T01:CDS
ATCTGCATCCCATGATGGGT+GGG 0.473032 4:-57434880 MsG0480021401.01.T01:intron
TCCTATCTGCATCCCATGAT+GGG 0.476764 4:-57434884 MsG0480021401.01.T01:CDS
TACAGATACTGTTTGTGGCT+TGG 0.485506 4:-57434927 MsG0480021401.01.T01:CDS
CTTTGGTGGTTTGGACATGT+GGG 0.489024 4:-57429773 MsG0480021401.01.T01:CDS
ACCATTGCCTGGATAGATGT+AGG 0.491013 4:+57429996 None:intergenic
AGAAATGAACCCACCCATCA+TGG 0.491698 4:+57434871 None:intergenic
TGGTTGCATCTCAACTTTGG+TGG 0.502619 4:-57429787 MsG0480021401.01.T01:CDS
ATTGATCCCTACATCTATCC+AGG 0.508369 4:-57430003 MsG0480021401.01.T01:CDS
TTTGATGGTGTTCAGCAGGA+TGG 0.513062 4:-57433666 MsG0480021401.01.T01:intron
ATAGTGTTACAGCAAAATGA+TGG 0.516213 4:+57429963 None:intergenic
CATCAGATAATGGACATGTC+TGG 0.523366 4:-57434730 MsG0480021401.01.T01:CDS
TATCTGCATCCCATGATGGG+TGG 0.531416 4:-57434881 MsG0480021401.01.T01:CDS
AAGATTGACGAAGTTGCTGA+TGG 0.532879 4:-57433714 MsG0480021401.01.T01:CDS
ATCCTATCTGCATCCCATGA+TGG 0.540343 4:-57434885 MsG0480021401.01.T01:CDS
TTACTTCCATTGTCAGCAAG+AGG 0.540360 4:-57431253 MsG0480021401.01.T01:CDS
TATCTTCATGGCCACGCTCA+AGG 0.546268 4:-57430246 MsG0480021401.01.T01:CDS
GAATGTACAGATACTGTTTG+TGG 0.547131 4:-57434932 MsG0480021401.01.T01:CDS
CATTTGCCTCTTGCTGACAA+TGG 0.549183 4:+57431247 None:intergenic
GGATTTGGAAATTGCAACAA+TGG 0.549902 4:-57430353 MsG0480021401.01.T01:CDS
GGTTCTATTGTCAATCTCAC+AGG 0.551368 4:-57430389 MsG0480021401.01.T01:CDS
ACGTTGCAATACAACCGATC+AGG 0.551803 4:-57433528 MsG0480021401.01.T01:intron
GGGGAAAATTTGTACCTGAT+CGG 0.552143 4:+57433514 None:intergenic
CCCTACATCTATCCAGGCAA+TGG 0.555705 4:-57429997 MsG0480021401.01.T01:CDS
CCATTGCCTGGATAGATGTA+GGG 0.555952 4:+57429997 None:intergenic
ATCCTGCTGAACACCATCAA+AGG 0.563238 4:+57433668 None:intergenic
TGCTGAACACCATCAAAGGA+AGG 0.570141 4:+57433672 None:intergenic
TGACGAAGTTGCTGATGGAT+CGG 0.575058 4:-57433709 MsG0480021401.01.T01:CDS
GAAATGAACCCACCCATCAT+GGG 0.575781 4:+57434872 None:intergenic
GAAATGCTGATACCATTGCC+TGG 0.575944 4:+57429985 None:intergenic
TGGCTATTCAGCGGTTCCTG+TGG 0.582335 4:-57433565 MsG0480021401.01.T01:intron
ATGCAGTCATTGATATTACA+AGG 0.586946 4:-57430071 MsG0480021401.01.T01:intron
TTTGGTGGTTTGGACATGTG+GGG 0.593043 4:-57429772 MsG0480021401.01.T01:CDS
GTCTTATCATCAATAACCAC+AGG 0.602658 4:+57433549 None:intergenic
CCAAATGCGTACTAATCCAT+CGG 0.606500 4:+57433920 None:intergenic
AGTATCTGTACATTCGTCAA+AGG 0.610714 4:+57434940 None:intergenic
ATGACAGTTCTTTATGATAG+CGG 0.614710 4:-57430048 MsG0480021401.01.T01:CDS
TGTGATCAACAATATTTGCA+CGG 0.615865 4:+57431196 None:intergenic
TGCAAATATTGTTGATCACA+AGG 0.618855 4:-57431193 MsG0480021401.01.T01:intron
GACAGTTCTTTATGATAGCG+GGG 0.621409 4:-57430046 MsG0480021401.01.T01:CDS
CCACGCTCAAGGATATCTCA+TGG 0.629018 4:-57430235 MsG0480021401.01.T01:intron
GTTGTGACAGCATGTTCCGA+TGG 0.629050 4:-57433936 MsG0480021401.01.T01:CDS
TTTGTATCCCGAACAGAACG+AGG 0.638157 4:+57433978 None:intergenic
GCTGAACACCATCAAAGGAA+GGG 0.643885 4:+57433673 None:intergenic
GCATCAGGACTTATTGTCAG+TGG 0.647307 4:-57434673 MsG0480021401.01.T01:CDS
TACAAAATTTATGGAAAACG+GGG 0.660584 4:-57433961 MsG0480021401.01.T01:CDS
CCATGAGATATCCTTGAGCG+TGG 0.672646 4:+57430235 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATTACATATTAATAATTA+AGG + Chr4:57433577-57433596 None:intergenic 10.0%
!! ATTAATATGTAATGTTAAAA+TGG - Chr4:57433582-57433601 MsG0480021401.01.T01:intron 10.0%
!!! TATTTTATTCAAAATAGAAA+AGG + Chr4:57432435-57432454 None:intergenic 10.0%
!!! TTCTATTTTGAATAAAATAA+AGG - Chr4:57432436-57432455 MsG0480021401.01.T01:intron 10.0%
!!! TTGAAAATTTTAAAACATAA+GGG - Chr4:57432789-57432808 MsG0480021401.01.T01:intron 10.0%
!! AAAAATGTATATAATTCCAT+AGG - Chr4:57433779-57433798 MsG0480021401.01.T01:intron 15.0%
!! ACATTTAATGTTTGATATTT+GGG - Chr4:57434100-57434119 MsG0480021401.01.T01:intron 15.0%
!! GTTGAAAAAATGAATTTATT+TGG - Chr4:57431312-57431331 MsG0480021401.01.T01:intron 15.0%
!! TACATTTAATGTTTGATATT+TGG - Chr4:57434099-57434118 MsG0480021401.01.T01:intron 15.0%
!! TTCAATATTATTAAATCTAG+AGG + Chr4:57429873-57429892 None:intergenic 15.0%
!!! AAATTATAGTTTTTGTACTT+CGG - Chr4:57433036-57433055 MsG0480021401.01.T01:intron 15.0%
!!! ACAATGAATTACTTTATTTT+AGG + Chr4:57432864-57432883 None:intergenic 15.0%
!!! ACTTAAAACTTTTAAACATA+CGG + Chr4:57432511-57432530 None:intergenic 15.0%
!!! ATTCTAATAAAGTTTACTTT+TGG - Chr4:57431124-57431143 MsG0480021401.01.T01:intron 15.0%
!!! ATTTTAGAAGAAAAAGAAAA+TGG - Chr4:57430464-57430483 MsG0480021401.01.T01:intron 15.0%
!!! CAATAGTTATTTTTATAAGA+TGG - Chr4:57433231-57433250 MsG0480021401.01.T01:intron 15.0%
!!! CTTATTTCTATTTTATATTG+AGG - Chr4:57430413-57430432 MsG0480021401.01.T01:CDS 15.0%
!!! CTTGAAAATTTTAAAACATA+AGG - Chr4:57432788-57432807 MsG0480021401.01.T01:intron 15.0%
!!! TGTTTTTATTGTAAAACAAT+TGG - Chr4:57434521-57434540 MsG0480021401.01.T01:intron 15.0%
!! AAACAATAAACAAGGTTAAT+TGG + Chr4:57432284-57432303 None:intergenic 20.0%
!! AACAATAAACAAGGTTAATT+GGG + Chr4:57432283-57432302 None:intergenic 20.0%
!! ATACAAAATTTATGGAAAAC+GGG - Chr4:57430747-57430766 MsG0480021401.01.T01:intron 20.0%
!! ATATTCCAAAAATGAACTAT+TGG - Chr4:57431473-57431492 MsG0480021401.01.T01:intron 20.0%
!! ATGTTCAATGTTAATAAGAA+AGG - Chr4:57433013-57433032 MsG0480021401.01.T01:intron 20.0%
!! GAAACCTAAAATAAACATAA+GGG - Chr4:57432820-57432839 MsG0480021401.01.T01:intron 20.0%
!! GATACAAAATTTATGGAAAA+CGG - Chr4:57430746-57430765 MsG0480021401.01.T01:intron 20.0%
!! GTATTAAAACAATAATGTGT+TGG + Chr4:57432242-57432261 None:intergenic 20.0%
!! GTATTATTATTGAGAAAAGA+TGG - Chr4:57434902-57434921 MsG0480021401.01.T01:CDS 20.0%
!! TAAAAGAGAGAGTAATTATT+TGG - Chr4:57431598-57431617 MsG0480021401.01.T01:intron 20.0%
!! TATTCCAAAAATGAACTATT+GGG - Chr4:57431474-57431493 MsG0480021401.01.T01:intron 20.0%
!! TGAAACCTAAAATAAACATA+AGG - Chr4:57432819-57432838 MsG0480021401.01.T01:intron 20.0%
!! TTTGTCTTTATGAAGTTTAT+GGG - Chr4:57430216-57430235 MsG0480021401.01.T01:intron 20.0%
!!! AAATGAATTTATTTGGTCTT+TGG - Chr4:57431319-57431338 MsG0480021401.01.T01:intron 20.0%
!!! AATATAGAAGATTTTACAGT+TGG - Chr4:57430944-57430963 MsG0480021401.01.T01:intron 20.0%
!!! AATGAATTTATTTGGTCTTT+GGG - Chr4:57431320-57431339 MsG0480021401.01.T01:intron 20.0%
!!! AATTTGCTAATATATTCATC+TGG - Chr4:57432377-57432396 MsG0480021401.01.T01:intron 20.0%
!!! CTTAAAACTTTTAAACATAC+GGG + Chr4:57432510-57432529 None:intergenic 20.0%
!!! GTTTTATTAACTCATTATCA+TGG + Chr4:57432609-57432628 None:intergenic 20.0%
!!! TATTGAATTTTTTGAGTATC+TGG - Chr4:57434299-57434318 MsG0480021401.01.T01:intron 20.0%
!!! TGTTTTCATAAACTTTGTTT+TGG - Chr4:57432354-57432373 MsG0480021401.01.T01:intron 20.0%
!!! TTGTTTTAAAAGTTTCTAGT+TGG + Chr4:57432759-57432778 None:intergenic 20.0%
! AAATATTAATCCTGAAGCTA+CGG + Chr4:57430361-57430380 None:intergenic 25.0%
! AACTGTCAAGAAAAAAAACA+AGG + Chr4:57431076-57431095 None:intergenic 25.0%
! AAGATTGTTTGGCAAAAATA+TGG - Chr4:57430064-57430083 MsG0480021401.01.T01:CDS 25.0%
! AATTCATGCAGGAAAAAATA+AGG + Chr4:57432219-57432238 None:intergenic 25.0%
! ACAATAAACAAGGTTAATTG+GGG + Chr4:57432282-57432301 None:intergenic 25.0%
! ATTGAGAAACAATTAATCCT+GGG + Chr4:57433869-57433888 None:intergenic 25.0%
! GAAACCTAAAGTAAACATAA+GGG + Chr4:57432480-57432499 None:intergenic 25.0%
! GCAACAAAAACTAAAACTAT+CGG + Chr4:57430624-57430643 None:intergenic 25.0%
! GTTGCAATAACAATAGATAT+TGG + Chr4:57430394-57430413 None:intergenic 25.0%
! GTTTGTCTTTATGAAGTTTA+TGG - Chr4:57430215-57430234 MsG0480021401.01.T01:intron 25.0%
! TAAAAAGTTAAAACCCTAGA+TGG + Chr4:57430568-57430587 None:intergenic 25.0%
! TACAAAATTTATGGAAAACG+GGG - Chr4:57430748-57430767 MsG0480021401.01.T01:intron 25.0%
! TAGCTTCAGGATTAATATTT+CGG - Chr4:57430361-57430380 MsG0480021401.01.T01:CDS 25.0%
! TATGTATTCTTGTGTATTAG+AGG - Chr4:57433072-57433091 MsG0480021401.01.T01:intron 25.0%
! TATTAGAATGAGTGTAAAGA+AGG + Chr4:57431113-57431132 None:intergenic 25.0%
! TGAAACCTAAAGTAAACATA+AGG + Chr4:57432481-57432500 None:intergenic 25.0%
! TGCTGTTAAAACAATAAACA+AGG + Chr4:57432292-57432311 None:intergenic 25.0%
! TTATTCTGATAGATCTTACT+TGG - Chr4:57433117-57433136 MsG0480021401.01.T01:intron 25.0%
! TTGTCTTTATGAAGTTTATG+GGG - Chr4:57430217-57430236 MsG0480021401.01.T01:intron 25.0%
!! AAAATAAGGTTAGTTAGCAT+TGG + Chr4:57432205-57432224 None:intergenic 25.0%
!! AAACAAAAAACTAGCTTGTA+TGG + Chr4:57430444-57430463 None:intergenic 25.0%
!! AATGTACAGAGAAATTTTTC+AGG - Chr4:57431722-57431741 MsG0480021401.01.T01:intron 25.0%
!! ATCAAGTATTAACTTGACTA+GGG + Chr4:57434163-57434182 None:intergenic 25.0%
!! GTATTTCTAAAAAATCCGTT+TGG - Chr4:57433706-57433725 MsG0480021401.01.T01:CDS 25.0%
!! TATCAAGTATTAACTTGACT+AGG + Chr4:57434164-57434183 None:intergenic 25.0%
!! TCAAATTCATTCTAAGAACT+TGG - Chr4:57431406-57431425 MsG0480021401.01.T01:intron 25.0%
!! TGTGAGTGTTTCAATTTTTA+GGG - Chr4:57431817-57431836 MsG0480021401.01.T01:intron 25.0%
!! TTGTGAGTGTTTCAATTTTT+AGG - Chr4:57431816-57431835 MsG0480021401.01.T01:intron 25.0%
!! TTTTTATAAGATGGTCACAT+AGG - Chr4:57433240-57433259 MsG0480021401.01.T01:intron 25.0%
!!! ATTTTGTTGTATGTGAAGTT+AGG + Chr4:57434052-57434071 None:intergenic 25.0%
!!! GTTTATTTTAGGTTTCAAGT+TGG + Chr4:57432816-57432835 None:intergenic 25.0%
!!! TCATTCTTTTTTCTACTTGA+TGG - Chr4:57432148-57432167 MsG0480021401.01.T01:intron 25.0%
!!! TTGAAACCTTTAAAACGTAA+GGG + Chr4:57432538-57432557 None:intergenic 25.0%
!!! TTTATTTTAGGCTTAATTGC+AGG + Chr4:57432852-57432871 None:intergenic 25.0%
AACAGAATTACAGAGGTTAA+AGG + Chr4:57430893-57430912 None:intergenic 30.0%
AAGTAACTGATCAGACTAAA+TGG + Chr4:57431893-57431912 None:intergenic 30.0%
AATACTAATCGGGATACATT+AGG - Chr4:57434872-57434891 MsG0480021401.01.T01:intron 30.0%
AATATAGCATGATAGGACTA+AGG + Chr4:57432945-57432964 None:intergenic 30.0%
AATATTGTTGATCACAAGGT+AGG - Chr4:57433520-57433539 MsG0480021401.01.T01:intron 30.0%
AATTACATCCTAGGAATACA+TGG + Chr4:57433924-57433943 None:intergenic 30.0%
ACAATTAATCCTGGGTATAA+CGG + Chr4:57433861-57433880 None:intergenic 30.0%
ACTTAAGACGTCAAAGAATA+AGG + Chr4:57431689-57431708 None:intergenic 30.0%
ACTTGTCCGTTTAAAGATTT+GGG + Chr4:57432694-57432713 None:intergenic 30.0%
AGAAAACAAATATGCAGCAA+AGG + Chr4:57433148-57433167 None:intergenic 30.0%
AGTAACTGATCAGACTAAAT+GGG + Chr4:57431892-57431911 None:intergenic 30.0%
AGTTTATGAAAACACACCTT+AGG + Chr4:57432348-57432367 None:intergenic 30.0%
ATACCTTGGAATATATAGTC+GGG - Chr4:57433670-57433689 MsG0480021401.01.T01:CDS 30.0%
ATAGTCAAAAGACGTTGAAA+AGG + Chr4:57431993-57432012 None:intergenic 30.0%
ATAGTGTTACAGCAAAATGA+TGG + Chr4:57434749-57434768 None:intergenic 30.0%
ATATTTGACACTGCAGAATT+TGG + Chr4:57430929-57430948 None:intergenic 30.0%
ATGACAGTTCTTTATGATAG+CGG - Chr4:57434661-57434680 MsG0480021401.01.T01:CDS 30.0%
ATGCAGTCATTGATATTACA+AGG - Chr4:57434638-57434657 MsG0480021401.01.T01:CDS 30.0%
ATTAATTCTTAAGCTCCCTA+AGG + Chr4:57430191-57430210 None:intergenic 30.0%
ATTACATCCTAGGAATACAT+GGG + Chr4:57433923-57433942 None:intergenic 30.0%
ATTCAATGGTCATCAGATAA+TGG - Chr4:57429969-57429988 MsG0480021401.01.T01:intron 30.0%
ATTGAAACACTCACAAGAAA+AGG + Chr4:57431812-57431831 None:intergenic 30.0%
CAAATTCGAATATCTTCCTA+AGG - Chr4:57432329-57432348 MsG0480021401.01.T01:intron 30.0%
CAAGTGTTTGATCAAATTTG+TGG - Chr4:57433299-57433318 MsG0480021401.01.T01:intron 30.0%
CATACCTTGGAATATATAGT+CGG - Chr4:57433669-57433688 MsG0480021401.01.T01:CDS 30.0%
CTCTATCTGTGAATAAAACA+TGG - Chr4:57431621-57431640 MsG0480021401.01.T01:intron 30.0%
GACAATGGAAGTAAAAAACT+GGG + Chr4:57433450-57433469 None:intergenic 30.0%
GACACAAAATATAGCATGAT+AGG + Chr4:57432952-57432971 None:intergenic 30.0%
GATTGAGAAACAATTAATCC+TGG + Chr4:57433870-57433889 None:intergenic 30.0%
GCTTGATATTGTATTCTCTT+TGG - Chr4:57430308-57430327 MsG0480021401.01.T01:CDS 30.0%
TAAATTTACAGTGATGAACG+TGG - Chr4:57432109-57432128 MsG0480021401.01.T01:intron 30.0%
TAATGTTAAAATGGCTCCTT+TGG - Chr4:57433591-57433610 MsG0480021401.01.T01:intron 30.0%
TACTGAAAATGCTATCTTCA+TGG - Chr4:57434451-57434470 MsG0480021401.01.T01:intron 30.0%
TATTTGACACTGCAGAATTT+GGG + Chr4:57430928-57430947 None:intergenic 30.0%
TCATGTGTGCTAATACTAAT+CGG - Chr4:57434861-57434880 MsG0480021401.01.T01:intron 30.0%
TCTCAATCTTGTAACAAACA+GGG - Chr4:57433882-57433901 MsG0480021401.01.T01:CDS 30.0%
TGACAATGGAAGTAAAAAAC+TGG + Chr4:57433451-57433470 None:intergenic 30.0%
TGATCCCTTATGTTTACTTT+AGG - Chr4:57432473-57432492 MsG0480021401.01.T01:intron 30.0%
TGCAAATATTGTTGATCACA+AGG - Chr4:57433516-57433535 MsG0480021401.01.T01:intron 30.0%
TGTCAACCCAAATCTTTAAA+CGG - Chr4:57432685-57432704 MsG0480021401.01.T01:intron 30.0%
TGTCTTTATGAAGTTTATGG+GGG - Chr4:57430218-57430237 MsG0480021401.01.T01:intron 30.0%
TGTGATCAACAATATTTGCA+CGG + Chr4:57433516-57433535 None:intergenic 30.0%
TGTTCGGGATACAAAATTTA+TGG - Chr4:57430739-57430758 MsG0480021401.01.T01:intron 30.0%
TGTTTGGCAAAAATATGGAA+AGG - Chr4:57430069-57430088 MsG0480021401.01.T01:intron 30.0%
TTCATAGGAATAACATACCT+TGG - Chr4:57433656-57433675 MsG0480021401.01.T01:intron 30.0%
TTCCAATATTCCCATGTTAA+GGG + Chr4:57433820-57433839 None:intergenic 30.0%
TTCTCAATCTTGTAACAAAC+AGG - Chr4:57433881-57433900 MsG0480021401.01.T01:CDS 30.0%
TTGAGTCAAAGCTCAAAAAA+AGG - Chr4:57430849-57430868 MsG0480021401.01.T01:intron 30.0%
TTGCTAATATATTCATCTGG+AGG - Chr4:57432380-57432399 MsG0480021401.01.T01:intron 30.0%
TTGGTTATGAATTACATCCT+AGG + Chr4:57433933-57433952 None:intergenic 30.0%
TTTGTACTTCGGTATCATTA+TGG - Chr4:57433047-57433066 MsG0480021401.01.T01:intron 30.0%
! AAGCAGATTCTTACAACTTT+TGG + Chr4:57430292-57430311 None:intergenic 30.0%
! ATTGGAAGTTATTTCATTCC+AGG - Chr4:57433833-57433852 MsG0480021401.01.T01:intron 30.0%
! TCTCTTTTATTACATTGAGC+AGG + Chr4:57431587-57431606 None:intergenic 30.0%
! TGTTTACTTTAGGTTTCAGT+TGG - Chr4:57432483-57432502 MsG0480021401.01.T01:intron 30.0%
! TTTGCCCAATAGTTCATTTT+TGG + Chr4:57431481-57431500 None:intergenic 30.0%
!! CTTGAAACCTTTAAAACGTA+AGG + Chr4:57432539-57432558 None:intergenic 30.0%
!! TGCATATTTGTTTTCTCTTC+AGG - Chr4:57433152-57433171 MsG0480021401.01.T01:intron 30.0%
!! TGGTCCCTTATGTTTATTTT+AGG + Chr4:57432827-57432846 None:intergenic 30.0%
!!! GGCATCTGTTTTATTTAACA+TGG - Chr4:57430598-57430617 MsG0480021401.01.T01:intron 30.0%
!!! GTTCTTTTTTAGTGTCCTTA+GGG - Chr4:57430173-57430192 MsG0480021401.01.T01:intron 30.0%
!!! TGTTCTTTTTTAGTGTCCTT+AGG - Chr4:57430172-57430191 MsG0480021401.01.T01:intron 30.0%
AAGGGATCATACATGCAATT+AGG + Chr4:57432462-57432481 None:intergenic 35.0%
ACATAACATTGTACTACAGC+TGG + Chr4:57432084-57432103 None:intergenic 35.0%
ACTACAGTTCTCTCAGATTA+TGG - Chr4:57429944-57429963 MsG0480021401.01.T01:intron 35.0%
ACTTGAAGTAACTGGTCAAA+AGG - Chr4:57432025-57432044 MsG0480021401.01.T01:intron 35.0%
AGTACACCATCGTAAAATTG+GGG + Chr4:57433972-57433991 None:intergenic 35.0%
AGTATCTGTACATTCGTCAA+AGG + Chr4:57429772-57429791 None:intergenic 35.0%
ATGGGTTTGACTAACGTATT+GGG + Chr4:57432899-57432918 None:intergenic 35.0%
ATTAACTCATTATCATGGCG+CGG + Chr4:57432604-57432623 None:intergenic 35.0%
ATTCTTGTGTATTAGAGGCA+AGG - Chr4:57433077-57433096 MsG0480021401.01.T01:intron 35.0%
CAACCAACAACTGGTATATT+AGG - Chr4:57431503-57431522 MsG0480021401.01.T01:intron 35.0%
CACGGACTCAAATTATTCAT+AGG - Chr4:57433641-57433660 MsG0480021401.01.T01:intron 35.0%
CACTTGTCCGTTTAAAGATT+TGG + Chr4:57432695-57432714 None:intergenic 35.0%
CATGTGTGCTAATACTAATC+GGG - Chr4:57434862-57434881 MsG0480021401.01.T01:intron 35.0%
CCTTTGGTAGAAGAAACTTA+GGG - Chr4:57433607-57433626 MsG0480021401.01.T01:intron 35.0%
CTACAGTTCTCTCAGATTAT+GGG - Chr4:57429945-57429964 MsG0480021401.01.T01:intron 35.0%
CTCAATACTGTTGAGTTTCA+TGG - Chr4:57430145-57430164 MsG0480021401.01.T01:intron 35.0%
CTTCCAATATTCCCATGTTA+AGG + Chr4:57433821-57433840 None:intergenic 35.0%
CTTTGGTAGAAGAAACTTAG+GGG - Chr4:57433608-57433627 MsG0480021401.01.T01:intron 35.0%
GAATGTACAGATACTGTTTG+TGG - Chr4:57429777-57429796 MsG0480021401.01.T01:CDS 35.0%
GAGTACACCATCGTAAAATT+GGG + Chr4:57433973-57433992 None:intergenic 35.0%
GATACCATACTTGAAGTAAC+TGG - Chr4:57432017-57432036 MsG0480021401.01.T01:intron 35.0%
GGATTTGGAAATTGCAACAA+TGG - Chr4:57434356-57434375 MsG0480021401.01.T01:intron 35.0%
GGGAGCTTAAGAATTAATCT+TGG - Chr4:57430193-57430212 MsG0480021401.01.T01:intron 35.0%
GTCTTATCATCAATAACCAC+AGG + Chr4:57431163-57431182 None:intergenic 35.0%
GTCTTTATGAAGTTTATGGG+GGG - Chr4:57430219-57430238 MsG0480021401.01.T01:intron 35.0%
GTGAAGTTAGGATGATCAAT+AGG + Chr4:57434040-57434059 None:intergenic 35.0%
TAATCGGGATACATTAGGAA+TGG - Chr4:57434877-57434896 MsG0480021401.01.T01:intron 35.0%
TAATGTGTTGGAATTCATGC+AGG + Chr4:57432230-57432249 None:intergenic 35.0%
TACCTTGGAATATATAGTCG+GGG - Chr4:57433671-57433690 MsG0480021401.01.T01:CDS 35.0%
TCCAATATTCCCATGTTAAG+GGG + Chr4:57433819-57433838 None:intergenic 35.0%
TCCTTTGGTAGAAGAAACTT+AGG - Chr4:57433606-57433625 MsG0480021401.01.T01:intron 35.0%
TCTGTGAATAAAACATGGTG+CGG - Chr4:57431626-57431645 MsG0480021401.01.T01:intron 35.0%
TGACAGTTCTTTATGATAGC+GGG - Chr4:57434662-57434681 MsG0480021401.01.T01:CDS 35.0%
TGAGTACACCATCGTAAAAT+TGG + Chr4:57433974-57433993 None:intergenic 35.0%
TGCACAGAAGAAAGAAGATA+AGG + Chr4:57434831-57434850 None:intergenic 35.0%
TGTACTCACCTACAATGTTA+AGG - Chr4:57433986-57434005 MsG0480021401.01.T01:CDS 35.0%
TTCAGATGCTTGAAAAACAG+AGG + Chr4:57434421-57434440 None:intergenic 35.0%
TTCCAACGTGAATAACGTTT+AGG + Chr4:57432567-57432586 None:intergenic 35.0%
TTCGTAGACACAGAAAATCA+TGG + Chr4:57434196-57434215 None:intergenic 35.0%
TTGACCAGTTACTTCAAGTA+TGG + Chr4:57432024-57432043 None:intergenic 35.0%
TTTAGGCTTAATTGCAGGTT+TGG + Chr4:57432847-57432866 None:intergenic 35.0%
TTTGGTAGAAGAAACTTAGG+GGG - Chr4:57433609-57433628 MsG0480021401.01.T01:intron 35.0%
! AACTATGTAGCTCTGCAATA+AGG + Chr4:57433387-57433406 None:intergenic 35.0%
! AAGCTACGGATTGTAAAAGT+TGG + Chr4:57430347-57430366 None:intergenic 35.0%
! AGAATTTTCCTTAAGACCAG+AGG + Chr4:57434592-57434611 None:intergenic 35.0%
! AGATTCTTACAACTTTTGGC+CGG + Chr4:57430288-57430307 None:intergenic 35.0%
! ATGCCTTTTGATGTTAGACA+CGG - Chr4:57434072-57434091 MsG0480021401.01.T01:intron 35.0%
! ATGCTATATTTTGTGTCACG+AGG - Chr4:57432955-57432974 MsG0480021401.01.T01:intron 35.0%
! ATTCTAAGAACTTGGAACAG+TGG - Chr4:57431414-57431433 MsG0480021401.01.T01:intron 35.0%
! CAGAATTTGGGATTGACTAA+CGG + Chr4:57430916-57430935 None:intergenic 35.0%
! CTCACAGGAAAAACTTTTGT+CGG - Chr4:57434335-57434354 MsG0480021401.01.T01:intron 35.0%
! GGAAAAACTTTTGTCGGATT+TGG - Chr4:57434341-57434360 MsG0480021401.01.T01:intron 35.0%
! GTTAGTCCCTTACGTTTTAA+AGG - Chr4:57432529-57432548 MsG0480021401.01.T01:intron 35.0%
! TCTTGCTCAATTTCTGCTTT+TGG - Chr4:57431913-57431932 MsG0480021401.01.T01:intron 35.0%
! TGCTATATTTTGTGTCACGA+GGG - Chr4:57432956-57432975 MsG0480021401.01.T01:intron 35.0%
! TGTTAAAAGAGTGTGCCAAA+CGG + Chr4:57433724-57433743 None:intergenic 35.0%
!! ATCAGTGATAATGGAAGAGA+CGG + Chr4:57430525-57430544 None:intergenic 35.0%
!! GTTTACTTTTGGCTATTCAG+CGG - Chr4:57431135-57431154 MsG0480021401.01.T01:intron 35.0%
!! TTTTATTTCCACTTTCCACG+AGG - Chr4:57431530-57431549 MsG0480021401.01.T01:intron 35.0%
!!! CGGATTTTTTAGAAATACCC+AGG + Chr4:57433704-57433723 None:intergenic 35.0%
!!! GAGGAATACTTTTTTGCTCT+AGG - Chr4:57432399-57432418 MsG0480021401.01.T01:intron 35.0%
AAACCCATGTTATGTCGCAA+AGG - Chr4:57432911-57432930 MsG0480021401.01.T01:intron 40.0%
AACCCCGACTATATATTCCA+AGG + Chr4:57433676-57433695 None:intergenic 40.0%
AAGATTGACGAAGTTGCTGA+TGG - Chr4:57430995-57431014 MsG0480021401.01.T01:intron 40.0%
AATATTCCCATGTTAAGGGG+TGG + Chr4:57433816-57433835 None:intergenic 40.0%
AATTGAAGTTGCAACCTCGT+GGG + Chr4:57431218-57431237 None:intergenic 40.0%
ACCCCTTAACATGGGAATAT+TGG - Chr4:57433815-57433834 MsG0480021401.01.T01:intron 40.0%
ACCTACAATGTTAAGGACTG+GGG - Chr4:57433993-57434012 MsG0480021401.01.T01:CDS 40.0%
ACTGATCAGACTAAATGGGT+TGG + Chr4:57431888-57431907 None:intergenic 40.0%
AGATGGTTGCATCTCAACTT+TGG - Chr4:57434919-57434938 MsG0480021401.01.T01:CDS 40.0%
AGGATGATCAATAGGTGCAT+TGG + Chr4:57434032-57434051 None:intergenic 40.0%
ATAAAACAGATGCCTTCGAG+CGG + Chr4:57430592-57430611 None:intergenic 40.0%
ATATTCCCATGTTAAGGGGT+GGG + Chr4:57433815-57433834 None:intergenic 40.0%
ATCCCGTGTCTAACATCAAA+AGG + Chr4:57434078-57434097 None:intergenic 40.0%
ATTGATCCCTACATCTATCC+AGG - Chr4:57434706-57434725 MsG0480021401.01.T01:CDS 40.0%
CAATAAGGAGGTTTGAGCAT+TGG + Chr4:57433372-57433391 None:intergenic 40.0%
CACCTACAATGTTAAGGACT+GGG - Chr4:57433992-57434011 MsG0480021401.01.T01:CDS 40.0%
CAGCCTAATATACCAGTTGT+TGG + Chr4:57431509-57431528 None:intergenic 40.0%
CATGGGTTTGACTAACGTAT+TGG + Chr4:57432900-57432919 None:intergenic 40.0%
CCAAATGCGTACTAATCCAT+CGG + Chr4:57430792-57430811 None:intergenic 40.0%
CCCTAAGTTTCTTCTACCAA+AGG + Chr4:57433610-57433629 None:intergenic 40.0%
CTAACGGAACAGAATTACAG+AGG + Chr4:57430900-57430919 None:intergenic 40.0%
CTCAGATTATGGGCATTCAA+TGG - Chr4:57429955-57429974 MsG0480021401.01.T01:intron 40.0%
CTCCTAAACGTTATTCACGT+TGG - Chr4:57432562-57432581 MsG0480021401.01.T01:intron 40.0%
CTGAACAAACAGTTGCAGTA+TGG + Chr4:57430005-57430024 None:intergenic 40.0%
CTTAATCAGTACACTTCCTC+TGG - Chr4:57434573-57434592 MsG0480021401.01.T01:intron 40.0%
GGATTGTAAAAGTTGGAGCT+GGG + Chr4:57430340-57430359 None:intergenic 40.0%
GGCAATTCGATCAGTGATAA+TGG + Chr4:57430534-57430553 None:intergenic 40.0%
GGGCTTAGTAATGATGTGTT+AGG - Chr4:57431837-57431856 MsG0480021401.01.T01:intron 40.0%
GGGGAAAATTTGTACCTGAT+CGG + Chr4:57431198-57431217 None:intergenic 40.0%
GGTTCTATTGTCAATCTCAC+AGG - Chr4:57434320-57434339 MsG0480021401.01.T01:intron 40.0%
GTAACAGAAACAAGTCAAGC+AGG + Chr4:57429926-57429945 None:intergenic 40.0%
GTACACCATCGTAAAATTGG+GGG + Chr4:57433971-57433990 None:intergenic 40.0%
TACACCATCGTAAAATTGGG+GGG + Chr4:57433970-57433989 None:intergenic 40.0%
TACAGATACTGTTTGTGGCT+TGG - Chr4:57429782-57429801 MsG0480021401.01.T01:CDS 40.0%
TATATTCCTGATGCAGAGCA+AGG + Chr4:57429898-57429917 None:intergenic 40.0%
TCACCTACAATGTTAAGGAC+TGG - Chr4:57433991-57434010 MsG0480021401.01.T01:CDS 40.0%
TGTCATCCCATTCCTTATTC+CGG - Chr4:57430266-57430285 MsG0480021401.01.T01:CDS 40.0%
TTAAACGGACAAGTGACGAA+TGG - Chr4:57432700-57432719 MsG0480021401.01.T01:intron 40.0%
TTACTTCCATTGTCAGCAAG+AGG - Chr4:57433456-57433475 MsG0480021401.01.T01:intron 40.0%
! AGTTTTTGTTGCCACATCTC+AGG - Chr4:57430632-57430651 MsG0480021401.01.T01:intron 40.0%
! CTTTTACAATCCGTAGCTTC+AGG - Chr4:57430348-57430367 MsG0480021401.01.T01:CDS 40.0%
! GACAGTTCTTTATGATAGCG+GGG - Chr4:57434663-57434682 MsG0480021401.01.T01:CDS 40.0%
! TACAACTTTTGGCCGGAATA+AGG + Chr4:57430281-57430300 None:intergenic 40.0%
! TATGTAGCTCTGCAATAAGG+AGG + Chr4:57433384-57433403 None:intergenic 40.0%
! TCAGAATCATTTTGCTAGCC+AGG - Chr4:57430820-57430839 MsG0480021401.01.T01:intron 40.0%
! TCAGTTGATTCACATGCATC+AGG - Chr4:57430021-57430040 MsG0480021401.01.T01:CDS 40.0%
! TGCCTTTTGATGTTAGACAC+GGG - Chr4:57434073-57434092 MsG0480021401.01.T01:intron 40.0%
! TGGGTTGACAATATGAGTGA+TGG + Chr4:57432675-57432694 None:intergenic 40.0%
! TTAACTTTTTACCCGCTCGA+AGG - Chr4:57430577-57430596 MsG0480021401.01.T01:intron 40.0%
! TTTTGGCCGGAATAAGGAAT+GGG + Chr4:57430275-57430294 None:intergenic 40.0%
!! CATCAGATAATGGACATGTC+TGG - Chr4:57429979-57429998 MsG0480021401.01.T01:CDS 40.0%
!! TCAGTGATAATGGAAGAGAC+GGG + Chr4:57430524-57430543 None:intergenic 40.0%
!! TGTACTACAGCTGGTTTGAT+GGG + Chr4:57432075-57432094 None:intergenic 40.0%
!! TTGTACTACAGCTGGTTTGA+TGG + Chr4:57432076-57432095 None:intergenic 40.0%
!!! ATGGGGGGATTTTTTGTTGT+GGG - Chr4:57430234-57430253 MsG0480021401.01.T01:intron 40.0%
!!! TATGGGGGGATTTTTTGTTG+TGG - Chr4:57430233-57430252 MsG0480021401.01.T01:intron 40.0%
ACACCATCGTAAAATTGGGG+GGG + Chr4:57433969-57433988 None:intergenic 45.0%
ACATCCTAGGAATACATGGG+TGG + Chr4:57433920-57433939 None:intergenic 45.0%
ACCATTGCCTGGATAGATGT+AGG + Chr4:57434716-57434735 None:intergenic 45.0%
ACGCCTTTGCGACATAACAT+GGG + Chr4:57432917-57432936 None:intergenic 45.0%
ACGTTGCAATACAACCGATC+AGG - Chr4:57431181-57431200 MsG0480021401.01.T01:intron 45.0%
AGAAATGAACCCACCCATCA+TGG + Chr4:57429841-57429860 None:intergenic 45.0%
AGCAACAAGTTCCTGAGATG+TGG + Chr4:57430646-57430665 None:intergenic 45.0%
AGTTTCCCACCCCTTAACAT+GGG - Chr4:57433807-57433826 MsG0480021401.01.T01:intron 45.0%
ATAGTCGGGGTTTGATTCCT+GGG - Chr4:57433684-57433703 MsG0480021401.01.T01:CDS 45.0%
ATCCTATCTGCATCCCATGA+TGG - Chr4:57429824-57429843 MsG0480021401.01.T01:intron 45.0%
ATCCTGCTGAACACCATCAA+AGG + Chr4:57431044-57431063 None:intergenic 45.0%
ATTGAAGTTGCAACCTCGTG+GGG + Chr4:57431217-57431236 None:intergenic 45.0%
CAATTGAAGTTGCAACCTCG+TGG + Chr4:57431219-57431238 None:intergenic 45.0%
CACAAGGTAGGCTACATGAT+TGG - Chr4:57433532-57433551 MsG0480021401.01.T01:CDS 45.0%
CATCCTAGGAATACATGGGT+GGG + Chr4:57433919-57433938 None:intergenic 45.0%
CATTTGCCTCTTGCTGACAA+TGG + Chr4:57433465-57433484 None:intergenic 45.0%
CCATTGCCTGGATAGATGTA+GGG + Chr4:57434715-57434734 None:intergenic 45.0%
CGGATTGTAAAAGTTGGAGC+TGG + Chr4:57430341-57430360 None:intergenic 45.0%
GAAATGAACCCACCCATCAT+GGG + Chr4:57429840-57429859 None:intergenic 45.0%
GAAATGCTGATACCATTGCC+TGG + Chr4:57434727-57434746 None:intergenic 45.0%
GCATCAGGACTTATTGTCAG+TGG - Chr4:57430036-57430055 MsG0480021401.01.T01:CDS 45.0%
GCTGAACACCATCAAAGGAA+GGG + Chr4:57431039-57431058 None:intergenic 45.0%
GTTAATGTATACGCAGCTGC+TGG - Chr4:57431942-57431961 MsG0480021401.01.T01:intron 45.0%
TAAAACAGATGCCTTCGAGC+GGG + Chr4:57430591-57430610 None:intergenic 45.0%
TACGCCTTTGCGACATAACA+TGG + Chr4:57432918-57432937 None:intergenic 45.0%
TATAGTCGGGGTTTGATTCC+TGG - Chr4:57433683-57433702 MsG0480021401.01.T01:CDS 45.0%
TCAAATCGCCCTTCCTTTGA+TGG - Chr4:57431028-57431047 MsG0480021401.01.T01:intron 45.0%
TCCCCAGTCCTTAACATTGT+AGG + Chr4:57433997-57434016 None:intergenic 45.0%
TCCTATCTGCATCCCATGAT+GGG - Chr4:57429825-57429844 MsG0480021401.01.T01:intron 45.0%
TGCATATGCAATTTGCCTCG+TGG + Chr4:57431548-57431567 None:intergenic 45.0%
TGCTGAACACCATCAAAGGA+AGG + Chr4:57431040-57431059 None:intergenic 45.0%
TGGTTGCATCTCAACTTTGG+TGG - Chr4:57434922-57434941 MsG0480021401.01.T01:CDS 45.0%
TTTGTATCCCGAACAGAACG+AGG + Chr4:57430734-57430753 None:intergenic 45.0%
! ACTTTGGTGGTTTGGACATG+TGG - Chr4:57434935-57434954 MsG0480021401.01.T01:CDS 45.0%
! AGGTACAAATTTTCCCCACG+AGG - Chr4:57431201-57431220 MsG0480021401.01.T01:CDS 45.0%
! CAGTGGTAGCGAAGATTGTT+TGG - Chr4:57430053-57430072 MsG0480021401.01.T01:CDS 45.0%
! CTTTGGTGGTTTGGACATGT+GGG - Chr4:57434936-57434955 MsG0480021401.01.T01:CDS 45.0%
! CTTTTGGCCGGAATAAGGAA+TGG + Chr4:57430276-57430295 None:intergenic 45.0%
! GCATCTCAACTTTGGTGGTT+TGG - Chr4:57434927-57434946 MsG0480021401.01.T01:CDS 45.0%
! TAGAGCATCCTCGTTCTGTT+CGG - Chr4:57430723-57430742 MsG0480021401.01.T01:intron 45.0%
! TGACGAAGTTGCTGATGGAT+CGG - Chr4:57431000-57431019 MsG0480021401.01.T01:intron 45.0%
! TTTGGTGGTTTGGACATGTG+GGG - Chr4:57434937-57434956 MsG0480021401.01.T01:CDS 45.0%
!! CCGATGGATTAGTACGCATT+TGG - Chr4:57430789-57430808 MsG0480021401.01.T01:intron 45.0%
!! GTACACTTCCTCTGGTCTTA+AGG - Chr4:57434581-57434600 MsG0480021401.01.T01:CDS 45.0%
!! TTCCTTTGATGGTGTTCAGC+AGG - Chr4:57431039-57431058 MsG0480021401.01.T01:intron 45.0%
!! TTTGATGGTGTTCAGCAGGA+TGG - Chr4:57431043-57431062 MsG0480021401.01.T01:intron 45.0%
!!! ATTTTTTGTTGTGGGGGTGG+GGG - Chr4:57430242-57430261 MsG0480021401.01.T01:CDS 45.0%
!!! GATTTTTTGTTGTGGGGGTG+GGG - Chr4:57430241-57430260 MsG0480021401.01.T01:CDS 45.0%
!!! GGATTTTTTGTTGTGGGGGT+GGG - Chr4:57430240-57430259 MsG0480021401.01.T01:CDS 45.0%
!!! TGGGGGGATTTTTTGTTGTG+GGG - Chr4:57430235-57430254 MsG0480021401.01.T01:intron 45.0%
ACCATCGTAAAATTGGGGGG+GGG + Chr4:57433967-57433986 None:intergenic 50.0%
ACCCATCATGGGATGCAGAT+AGG + Chr4:57429829-57429848 None:intergenic 50.0%
ACTCATTATCATGGCGCGGA+AGG + Chr4:57432600-57432619 None:intergenic 50.0%
ATCCTGGGTATAACGGTTCC+TGG + Chr4:57433854-57433873 None:intergenic 50.0%
CACCATCGTAAAATTGGGGG+GGG + Chr4:57433968-57433987 None:intergenic 50.0%
CAGTTTCCCACCCCTTAACA+TGG - Chr4:57433806-57433825 MsG0480021401.01.T01:intron 50.0%
CATGTGGGGAGTAGACTTGT+AGG - Chr4:57434951-57434970 MsG0480021401.01.T01:CDS 50.0%
CATGTTAAGGGGTGGGAAAC+TGG + Chr4:57433808-57433827 None:intergenic 50.0%
CCACGCTCAAGGATATCTCA+TGG - Chr4:57434474-57434493 MsG0480021401.01.T01:intron 50.0%
CCATGAGATATCCTTGAGCG+TGG + Chr4:57434477-57434496 None:intergenic 50.0%
CCCTACATCTATCCAGGCAA+TGG - Chr4:57434712-57434731 MsG0480021401.01.T01:CDS 50.0%
CCCTAGATGGTTCACATGCA+CGG + Chr4:57430555-57430574 None:intergenic 50.0%
CCGTGCATGTGAACCATCTA+GGG - Chr4:57430552-57430571 MsG0480021401.01.T01:intron 50.0%
CTCATTATCATGGCGCGGAA+GGG + Chr4:57432599-57432618 None:intergenic 50.0%
CTTGGCTGCGATGTCTGATT+TGG - Chr4:57429800-57429819 MsG0480021401.01.T01:CDS 50.0%
GCAATTTGCCTCGTGGAAAG+TGG + Chr4:57431541-57431560 None:intergenic 50.0%
GCTTTGACTCAAGCTCTTCC+TGG + Chr4:57430841-57430860 None:intergenic 50.0%
GGGCAAACTCAACCAACAAC+TGG - Chr4:57431494-57431513 MsG0480021401.01.T01:intron 50.0%
GGTGGGAAACTGGATTCCTA+TGG + Chr4:57433798-57433817 None:intergenic 50.0%
GTTGTGACAGCATGTTCCGA+TGG - Chr4:57430773-57430792 MsG0480021401.01.T01:intron 50.0%
TAAAAGTTGGAGCTGGGCTG+TGG + Chr4:57430334-57430353 None:intergenic 50.0%
TATACGCAGCTGCTGGTCAA+TGG - Chr4:57431949-57431968 MsG0480021401.01.T01:intron 50.0%
TATCTTCATGGCCACGCTCA+AGG - Chr4:57434463-57434482 MsG0480021401.01.T01:intron 50.0%
TGAATGCCTTGCTCTGCATC+AGG - Chr4:57429889-57429908 MsG0480021401.01.T01:intron 50.0%
TTCCAGGAACCGTTATACCC+AGG - Chr4:57433849-57433868 MsG0480021401.01.T01:CDS 50.0%
TTGCCCACCCATGTATTCCT+AGG - Chr4:57433913-57433932 MsG0480021401.01.T01:CDS 50.0%
! AGAGCATCCTCGTTCTGTTC+GGG - Chr4:57430724-57430743 MsG0480021401.01.T01:intron 50.0%
! TATCTGCATCCCATGATGGG+TGG - Chr4:57429828-57429847 MsG0480021401.01.T01:intron 50.0%
!! ATCTGCATCCCATGATGGGT+GGG - Chr4:57429829-57429848 MsG0480021401.01.T01:intron 50.0%
!! CTTAGGGGGCGTTTGTTTCA+CGG - Chr4:57433623-57433642 MsG0480021401.01.T01:intron 50.0%
!!! GGGATTTTTTGTTGTGGGGG+TGG - Chr4:57430239-57430258 MsG0480021401.01.T01:CDS 50.0%
!!! GGGGGGATTTTTTGTTGTGG+GGG - Chr4:57430236-57430255 MsG0480021401.01.T01:CDS 50.0%
!!! TTTTTTGTTGTGGGGGTGGG+GGG - Chr4:57430243-57430262 MsG0480021401.01.T01:CDS 50.0%
ATCGTAAAATTGGGGGGGGG+GGG + Chr4:57433964-57433983 None:intergenic 55.0%
CATCGTAAAATTGGGGGGGG+GGG + Chr4:57433965-57433984 None:intergenic 55.0%
CCATCGTAAAATTGGGGGGG+GGG + Chr4:57433966-57433985 None:intergenic 55.0%
GCCGTGCATGTGAACCATCT+AGG - Chr4:57430551-57430570 MsG0480021401.01.T01:intron 55.0%
TGGCTATTCAGCGGTTCCTG+TGG - Chr4:57431144-57431163 MsG0480021401.01.T01:intron 55.0%
TCGTAAAATTGGGGGGGGGG+GGG + Chr4:57433963-57433982 None:intergenic 60.0%
! CCCCCCCCCCAATTTTACGA+TGG - Chr4:57433963-57433982 MsG0480021401.01.T01:CDS 60.0%
CGTAAAATTGGGGGGGGGGG+GGG + Chr4:57433962-57433981 None:intergenic 65.0%
GTAAAATTGGGGGGGGGGGG+GGG + Chr4:57433961-57433980 None:intergenic 65.0%
TAAAATTGGGGGGGGGGGGG+GGG + Chr4:57433960-57433979 None:intergenic 65.0%
AAAATTGGGGGGGGGGGGGG+GGG + Chr4:57433959-57433978 None:intergenic 70.0%
AAATTGGGGGGGGGGGGGGG+GGG + Chr4:57433958-57433977 None:intergenic 75.0%
! AATTGGGGGGGGGGGGGGGG+GGG + Chr4:57433957-57433976 None:intergenic 80.0%
! ATTGGGGGGGGGGGGGGGGG+GGG + Chr4:57433956-57433975 None:intergenic 85.0%
! GGGGGGGGGGGGGGGGGGGT+TGG + Chr4:57433952-57433971 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
Chr4 gene 57429759 57434972 57429759 ID=MsG0480021401.01;Name=MsG0480021401.01
Chr4 mRNA 57429759 57434972 57429759 ID=MsG0480021401.01.T01;Parent=MsG0480021401.01;Name=MsG0480021401.01.T01;_AED=0.48;_eAED=0.53;_QI=0|0.37|0.33|1|0.62|0.55|9|0|370
Chr4 exon 57434881 57434972 57434881 ID=MsG0480021401.01.T01:exon:17193;Parent=MsG0480021401.01.T01
Chr4 exon 57434578 57434780 57434578 ID=MsG0480021401.01.T01:exon:17192;Parent=MsG0480021401.01.T01
Chr4 exon 57433848 57434029 57433848 ID=MsG0480021401.01.T01:exon:17191;Parent=MsG0480021401.01.T01
Chr4 exon 57433667 57433733 57433667 ID=MsG0480021401.01.T01:exon:17190;Parent=MsG0480021401.01.T01
Chr4 exon 57433529 57433576 57433529 ID=MsG0480021401.01.T01:exon:17189;Parent=MsG0480021401.01.T01
Chr4 exon 57431194 57431279 57431194 ID=MsG0480021401.01.T01:exon:17188;Parent=MsG0480021401.01.T01
Chr4 exon 57430236 57430476 57430236 ID=MsG0480021401.01.T01:exon:17187;Parent=MsG0480021401.01.T01
Chr4 exon 57429973 57430087 57429973 ID=MsG0480021401.01.T01:exon:17186;Parent=MsG0480021401.01.T01
Chr4 exon 57429759 57429837 57429759 ID=MsG0480021401.01.T01:exon:17185;Parent=MsG0480021401.01.T01
Chr4 CDS 57434881 57434972 57434881 ID=MsG0480021401.01.T01:cds;Parent=MsG0480021401.01.T01
Chr4 CDS 57434578 57434780 57434578 ID=MsG0480021401.01.T01:cds;Parent=MsG0480021401.01.T01
Chr4 CDS 57433848 57434029 57433848 ID=MsG0480021401.01.T01:cds;Parent=MsG0480021401.01.T01
Chr4 CDS 57433667 57433733 57433667 ID=MsG0480021401.01.T01:cds;Parent=MsG0480021401.01.T01
Chr4 CDS 57433529 57433576 57433529 ID=MsG0480021401.01.T01:cds;Parent=MsG0480021401.01.T01
Chr4 CDS 57431194 57431279 57431194 ID=MsG0480021401.01.T01:cds;Parent=MsG0480021401.01.T01
Chr4 CDS 57430236 57430476 57430236 ID=MsG0480021401.01.T01:cds;Parent=MsG0480021401.01.T01
Chr4 CDS 57429973 57430087 57429973 ID=MsG0480021401.01.T01:cds;Parent=MsG0480021401.01.T01
Chr4 CDS 57429759 57429837 57429759 ID=MsG0480021401.01.T01:cds;Parent=MsG0480021401.01.T01
Gene Sequence

>MsG0480021401.01.T01

ATGCTGATAACCTTTGACGAATGTACAGATACTGTTTGTGGCTTGGCTGCGATGTCTGATTTGGAATCCTATCTGCATCCCATGATGGGTGGTTCTCTCAGATTATGGGCATTCAATGGTCATCAGATAATGGACATGTCTGGCCATACTGCAACTGTTTGTTCAGTTGATTCACATGCATCAGGACTTATTGTCAGTGGTAGCGAAGATTGTTTGGCAAAAATATGGAAAGGTAATGATTTCTTTTTATTTGATATTATCTTTATATATTGCTTTAGTCATGCTACTCAATACTATTTGAGTTGTGTTCAGAGCTTAGAGCATCCTCGTTCTGTTCGGGATACAAAATTTATGGAAAACGGGGATGTTGTGACAGCATGTTCCGATGGATTAGTACGCATTTGGACTGCAGATCAGAATCATTTTGCTAGCCAGGAAGAGCTTGAGTCAAAGCTCAAAAAAAGGAAATTGAATGACATTGACGAAGTTGCTGATGGATCGGAAGAATCAAATCGCCCTTCCTTTGATGGTGTTCAGCAGGATGCGGTTCCTGTGGTTATTGATGATAAGACGTTGCAATACAACCGATCAGTTTTTTACTTCCATTGTCAGCAAGAGGCAAATGTTTATAATTCAATTAACTATGAAGTGAACCGTGCAAATATTGTTGATCACAAGCATCATTATTTTTCTTACTGTTATGATGATATATACGAATTCAATATTGAATTTTTTGAGTATCTGGTTCTATTGTCAATCTCACAGGAAAAACTTTTGTCGGATTTGGAAATTGCAACAATGGAAAACATTTATCGTAGACTCGAAAGTCAAGATGATAATGCCTCTGTTTTTCAAGCATCTGAAATTGATTTATTACTGAAAATGCTATCTTCATGGCCACGCTCAAGGATATCTCATGTCATTGATATTACAAGGATGACAGTTCTTTATGATAGCGGGGCTAATCTACTTATGACAAAAATTGATCCCTACATCTATCCAGGCAATGGTATCAGCATTTCCATCATTTTGCTGAATGGTAGTATTATTATTGAGAAAAGATGGTTGCATCTCAACTTTGGTGGTTTGGACATGTGGGGAGTAGACTTGTAG
Protein sequence

>MsG0480021401.01.T01

MLITFDECTDTVCGLAAMSDLESYLHPMMGGSLRLWAFNGHQIMDMSGHTATVCSVDSHASGLIVSGSEDCLAKIWKGNDFFLFDIIFIYCFSHATQYYLSCVQSLEHPRSVRDTKFMENGDVVTACSDGLVRIWTADQNHFASQEELESKLKKRKLNDIDEVADGSEESNRPSFDGVQQDAVPVVIDDKTLQYNRSVFYFHCQQEANVYNSINYEVNRANIVDHKHHYFSYCYDDIYEFNIEFFEYLVLLSISQEKLLSDLEIATMENIYRRLESQDDNASVFQASEIDLLLKMLSSWPRSRISHVIDITRMTVLYDSGANLLMTKIDPYIYPGNGISISIILLNGSIIIEKRWLHLNFGGLDMWGVDL*