AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021493.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021493.01.T01 MTR_4g074460 87.514 881 33 4 1 804 1 881 0.0 1442
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021493.01.T01 AT3G19870 46.517 890 369 18 6 804 10 883 0.0 700
MsG0480021493.01.T01 AT3G19870 44.157 890 363 19 6 804 10 856 0.0 637

Find 201 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTTGTTCTTCCAGTTTC+AGG 0.162522 4:-58575557 None:intergenic
GTTATTAACCGACCCAATTT+TGG 0.167419 4:+58573178 MsG0480021493.01.T01:CDS
CGAGAGAGCTCATCATTATT+TGG 0.187691 4:+58573742 MsG0480021493.01.T01:CDS
CTTACTTCCAAAAGTTAAAA+TGG 0.190876 4:+58574736 MsG0480021493.01.T01:CDS
AGAGCTACTCACAAACTTTA+TGG 0.220712 4:+58574835 MsG0480021493.01.T01:CDS
TCGGCAATTCTATGAAATAT+TGG 0.221359 4:-58574782 None:intergenic
GCGTATGCTGGTCTGCATTC+CGG 0.260291 4:+58575227 MsG0480021493.01.T01:CDS
CGTATGCTGGTCTGCATTCC+GGG 0.264401 4:+58575228 MsG0480021493.01.T01:CDS
TATCTTGTAAGAAGCATTCT+TGG 0.272890 4:+58574678 MsG0480021493.01.T01:CDS
GTTCAAAATTTCTGCAACTT+TGG 0.275093 4:-58575609 None:intergenic
CGGCAATTCTATGAAATATT+GGG 0.278436 4:-58574781 None:intergenic
TAGTAGCAAACCTGCTTATC+TGG 0.281648 4:+58575463 MsG0480021493.01.T01:CDS
ATGTCTATCGGAGCCAAAAT+TGG 0.289799 4:-58573191 None:intergenic
TTGAGATGCATGATCTTTAC+TGG 0.298212 4:-58575882 None:intergenic
TTTCACAAGTTTCTCATTGC+TGG 0.299998 4:+58574085 MsG0480021493.01.T01:CDS
CCCTGTTCAAACACCTTTAC+CGG 0.304519 4:-58573992 None:intergenic
GATGATGGAGTTTGTTTCTA+TGG 0.317627 4:+58573543 MsG0480021493.01.T01:CDS
AATGATATTTCGTACTTTGC+AGG 0.325058 4:+58574159 MsG0480021493.01.T01:CDS
TCCTTCTTTGTTTGATCCGT+TGG 0.333363 4:+58573880 MsG0480021493.01.T01:CDS
CTATACTGGTGTCGGTTCCC+TGG 0.339463 4:-58575990 None:intergenic
ATGTAACACAGTAGCATATA+TGG 0.339541 4:-58575792 None:intergenic
TTCTAATGATGATGATAGTT+TGG 0.343810 4:+58573964 MsG0480021493.01.T01:CDS
GTTCCTCTTGGAAAGGATTC+CGG 0.346648 4:+58575923 MsG0480021493.01.T01:CDS
TAAGGAACAATCTAGAACTA+TGG 0.348325 4:-58574955 None:intergenic
TTATTTGGTGTTTCGATTGT+TGG 0.351664 4:+58573757 MsG0480021493.01.T01:CDS
CTGCTTATCTGGAGGGCATC+AGG 0.355747 4:+58575474 MsG0480021493.01.T01:CDS
TCACAGGTCATTCCTGAAAC+TGG 0.359804 4:+58575545 MsG0480021493.01.T01:CDS
TTCAGGAATGACCTGTGAAT+TGG 0.361208 4:-58575540 None:intergenic
TCCGGTAAAGGTGTTTGAAC+AGG 0.363312 4:+58573991 MsG0480021493.01.T01:CDS
TCAGAAGGTAACAGAGAGTT+TGG 0.366965 4:+58573138 MsG0480021493.01.T01:CDS
AAGGTGTGTGTGAGGGAAAA+TGG 0.368636 4:-58572975 None:intergenic
AATTGCAACCTTCAATGCTT+AGG 0.377031 4:+58573590 MsG0480021493.01.T01:CDS
AGCTACTGTTGTGATTGATT+TGG 0.377270 4:+58575964 MsG0480021493.01.T01:CDS
AGCCTTGGAGGCACGATGCT+TGG 0.384228 4:+58575273 MsG0480021493.01.T01:CDS
AACAGCGAGGAATTTGGTTC+GGG 0.388672 4:+58573448 MsG0480021493.01.T01:CDS
GAAGTGAATCTATCTCTTCC+AGG 0.391870 4:-58575766 None:intergenic
TCCCATTCGTGGTGGGATAG+TGG 0.396662 4:-58572794 None:intergenic
CAAGTAGACGGGATAGTCTA+AGG 0.397566 4:-58574973 None:intergenic
TTCCAAGAGCTCTACTTCCT+TGG 0.405259 4:-58574907 None:intergenic
AACTGAACCCTAAGCATTGA+AGG 0.405533 4:-58573598 None:intergenic
GCCTTGGAGGCACGATGCTT+GGG 0.407140 4:+58575274 MsG0480021493.01.T01:CDS
AGTTAAAATGGATTATAAGT+TGG 0.407179 4:+58574748 MsG0480021493.01.T01:CDS
TTCGATTGTTGGCAATTCAT+TGG 0.414917 4:+58573768 MsG0480021493.01.T01:CDS
TTTCCTCGATAGGGGCTTCA+CGG 0.415641 4:-58575499 None:intergenic
TCCAAGAGCTCTACTTCCTT+GGG 0.425322 4:-58574906 None:intergenic
TATGTTAACATCAACTATAC+TGG 0.429355 4:-58576004 None:intergenic
AGTACTTTCAATCGCATGTT+GGG 0.432158 4:+58575722 MsG0480021493.01.T01:CDS
TGTAAGAAGCATTCTTGGTT+GGG 0.432544 4:+58574683 MsG0480021493.01.T01:CDS
TCCCTCAGTATTGTTCCTCT+TGG 0.433067 4:+58575911 MsG0480021493.01.T01:CDS
AGACAGAGCAAGAAGCAATA+AGG 0.433135 4:-58573925 None:intergenic
GATACCTGTGGTTGTGGCAT+TGG 0.434754 4:+58573567 MsG0480021493.01.T01:CDS
GAACAGCGAGGAATTTGGTT+CGG 0.435122 4:+58573447 MsG0480021493.01.T01:CDS
CAAGATTTCATTACTGTATC+CGG 0.436830 4:-58574881 None:intergenic
CGGATACAGTAATGAAATCT+TGG 0.436961 4:+58574882 MsG0480021493.01.T01:CDS
TTATCACGTACTTCCAAATC+AGG 0.437429 4:-58575016 None:intergenic
CAGATGTTGTTGGACATTTG+TGG 0.437606 4:+58573275 MsG0480021493.01.T01:CDS
CGATTAGGGTTTCCCATTCG+TGG 0.438621 4:-58572805 None:intergenic
TTCTGAAAGTTCCAATTCAC+AGG 0.440669 4:+58575529 MsG0480021493.01.T01:CDS
TGGTGGGATAGTGGCTTTGA+CGG 0.441020 4:-58572785 None:intergenic
ATTGCAACCTTCAATGCTTA+GGG 0.441054 4:+58573591 MsG0480021493.01.T01:CDS
CTTAGAGATATCTTGAGCCT+TGG 0.449958 4:+58575258 MsG0480021493.01.T01:CDS
GAACATTGAAGAAAGAGGTT+TGG 0.451511 4:-58575314 None:intergenic
TCCACAAAAGCAGCAACAAC+AGG 0.453414 4:-58574647 None:intergenic
ATTGAGAAGAAGATAGAGAA+TGG 0.456656 4:+58573833 MsG0480021493.01.T01:CDS
GTTGGAGTTTGAGTTGAAGA+GGG 0.456983 4:-58572922 None:intergenic
TGTTTACTTTCAGATGTTGT+TGG 0.460197 4:+58573265 MsG0480021493.01.T01:CDS
GTTGGCAATTCATTGGTTGT+TGG 0.461617 4:+58573775 MsG0480021493.01.T01:CDS
TGTGTGAACAGCGAGGAATT+TGG 0.467143 4:+58573442 MsG0480021493.01.T01:CDS
GTTGAAGAGGGGAATCTTTG+CGG 0.472158 4:-58572910 None:intergenic
GAACGGCGTCGGGAGGTGAT+TGG 0.472495 4:-58573030 None:intergenic
GTGTGAGTGTTTGAGAGAAT+TGG 0.472703 4:+58573228 MsG0480021493.01.T01:CDS
AAGAAGAAAAGGTATATGAT+AGG 0.472815 4:-58575849 None:intergenic
TGACGGTGGTGGCGCCGTCA+TGG 0.474312 4:-58572768 None:intergenic
GCTTCTTACAAGATACTAAA+CGG 0.476847 4:-58574670 None:intergenic
GTATCTGTAGTCAGGAATAC+AGG 0.477981 4:-58575651 None:intergenic
ATTGCAGTCTCGGTGCTCAC+TGG 0.478171 4:-58574049 None:intergenic
GGGAGGTATTGTCTGATTCT+CGG 0.478526 4:-58574801 None:intergenic
AAAGAGGTTTGGTGTGAAGA+AGG 0.479063 4:-58575303 None:intergenic
TGAAGCCCCTATCGAGGAAA+AGG 0.480538 4:+58575502 MsG0480021493.01.T01:CDS
TATACTGGTGTCGGTTCCCT+GGG 0.480629 4:-58575989 None:intergenic
TGGAAGTACGTGATAATTCA+AGG 0.482431 4:+58575023 MsG0480021493.01.T01:CDS
ATCTATCTCTTCCAGGGATG+TGG 0.482529 4:-58575759 None:intergenic
CAATAACACTGCCACATCCC+TGG 0.482809 4:+58575748 MsG0480021493.01.T01:CDS
TTCCACCACAAGAAATCTGT+TGG 0.483400 4:+58574132 MsG0480021493.01.T01:CDS
AGTTGGAGTTTGAGTTGAAG+AGG 0.483664 4:-58572923 None:intergenic
GCCACTATCCCACCACGAAT+GGG 0.485060 4:+58572793 MsG0480021493.01.T01:CDS
TTTGGTTGAAATTCTGTTGA+CGG 0.486614 4:+58573156 MsG0480021493.01.T01:CDS
CAGGACCTACTTGCGTATGC+TGG 0.492254 4:+58575215 MsG0480021493.01.T01:intron
TCCCAAGGAAGTAGAGCTCT+TGG 0.492790 4:+58574905 MsG0480021493.01.T01:CDS
TGTCTATCGGAGCCAAAATT+GGG 0.493557 4:-58573190 None:intergenic
CCTGCCATGTATCTGTAGTC+AGG 0.494286 4:-58575659 None:intergenic
CCTTGTGGAGAAACATGGTC+CGG 0.494528 4:+58574862 MsG0480021493.01.T01:CDS
AGAGATATCTTGAGCCTTGG+AGG 0.495534 4:+58575261 MsG0480021493.01.T01:CDS
TTGTAAGAAGCATTCTTGGT+TGG 0.498656 4:+58574682 MsG0480021493.01.T01:CDS
TGAGTAGCTCTAACAATCCA+TGG 0.499938 4:-58574823 None:intergenic
AGCCACTATCCCACCACGAA+TGG 0.500666 4:+58572792 MsG0480021493.01.T01:CDS
TATGGTGATACCTGTGGTTG+TGG 0.500959 4:+58573561 MsG0480021493.01.T01:CDS
CAGTATTGTTCCTCTTGGAA+AGG 0.501856 4:+58575916 MsG0480021493.01.T01:CDS
AGAAAAGGTATATGATAGGA+TGG 0.505933 4:-58575845 None:intergenic
GGTGTGATGTGAACGGCGTC+GGG 0.506098 4:-58573040 None:intergenic
TTTCGGTGGTGGTGTTGGAT+TGG 0.508729 4:-58572835 None:intergenic
GGAGGTTCACCAAGAAGAAA+AGG 0.510354 4:-58575860 None:intergenic
ACGAAATGCAATTGCAGTCT+CGG 0.512231 4:-58574059 None:intergenic
CGGTGTGATGTGAACGGCGT+CGG 0.513451 4:-58573041 None:intergenic
CTGATGCCCTCCAGATAAGC+AGG 0.513904 4:-58575473 None:intergenic
TGGAATTTGTCGAACTATGT+TGG 0.517867 4:+58574925 MsG0480021493.01.T01:CDS
AACAGATTTCTTGTGGTGGA+AGG 0.522426 4:-58574130 None:intergenic
TAGTTTGGTTGATCCGGTAA+AGG 0.526028 4:+58573979 MsG0480021493.01.T01:CDS
TTGGAGTTTGAGTTGAAGAG+GGG 0.526390 4:-58572921 None:intergenic
GTTGACTCCATGTGGGATGA+TGG 0.528328 4:+58573528 MsG0480021493.01.T01:CDS
GACAAGTGAAAGCAAGTAGA+CGG 0.531847 4:-58574985 None:intergenic
GCAAACGATGACGGAGGTGA+CGG 0.531861 4:-58573089 None:intergenic
TGATGATAGTTTGGTTGATC+CGG 0.535903 4:+58573973 MsG0480021493.01.T01:CDS
AAAGGAATTGAGGAGGGCAT+TGG 0.536923 4:+58573480 MsG0480021493.01.T01:CDS
CGTCGAGGAAGATGAGGAGT+TGG 0.537261 4:-58572940 None:intergenic
TGCTTATCTGGAGGGCATCA+GGG 0.537797 4:+58575475 MsG0480021493.01.T01:CDS
GATGCTGGAGAGTCGTAGAC+TGG 0.539307 4:+58574622 MsG0480021493.01.T01:CDS
ATCGGAGATGCAAACGATGA+CGG 0.542266 4:-58573098 None:intergenic
TCCCAAGCATCGTGCCTCCA+AGG 0.547733 4:-58575275 None:intergenic
TCCTCGCTGTTCACACATTG+TGG 0.549042 4:-58573436 None:intergenic
GAGTGAGGATAAGAGATGAT+CGG 0.549634 4:-58572885 None:intergenic
TGTGTGAGGGAAAATGGAAG+TGG 0.551279 4:-58572969 None:intergenic
ATAAACTGTTCTTTGAGTAA+CGG 0.551322 4:-58573061 None:intergenic
GATAAGAGATGATCGGAGAG+AGG 0.553316 4:-58572878 None:intergenic
GTTTGAATACAAAGGAATTG+AGG 0.553834 4:+58573470 MsG0480021493.01.T01:CDS
TGAATCCAACAGATTTCTTG+TGG 0.554245 4:-58574137 None:intergenic
AATTCCAATGCCACAACCAC+AGG 0.561019 4:-58573571 None:intergenic
ACATGAGCCACTCCGTGTCA+TGG 0.563854 4:+58575583 MsG0480021493.01.T01:CDS
TGAGATGCATGATCTTTACT+GGG 0.564528 4:-58575881 None:intergenic
GATAGTGGCTTTGACGGTGG+TGG 0.565697 4:-58572779 None:intergenic
ACAAGTGAAAGCAAGTAGAC+GGG 0.568245 4:-58574984 None:intergenic
AACATCAACTATACTGGTGT+CGG 0.570417 4:-58575998 None:intergenic
GCCAACGGATCAAACAAAGA+AGG 0.570507 4:-58573881 None:intergenic
CCTGACTACAGATACATGGC+AGG 0.570716 4:+58575659 MsG0480021493.01.T01:CDS
TAGGGTTTCCCATTCGTGGT+GGG 0.571355 4:-58572801 None:intergenic
TAGGATGGAATCGATCCATA+AGG 0.572309 4:-58575830 None:intergenic
AGCAAACCTGCTTATCTGGA+GGG 0.572533 4:+58575467 MsG0480021493.01.T01:CDS
TGGGATAGTGGCTTTGACGG+TGG 0.573296 4:-58572782 None:intergenic
TAGTACTTTCAATCGCATGT+TGG 0.575797 4:+58575721 MsG0480021493.01.T01:CDS
GATGCTTGTGAACATGATGC+TGG 0.576342 4:+58574607 MsG0480021493.01.T01:CDS
GAGTAGCTCTAACAATCCAT+GGG 0.576802 4:-58574822 None:intergenic
GTAATGAAATCTTGGTCCCA+AGG 0.578853 4:+58574890 MsG0480021493.01.T01:CDS
GTGTGTTGAAAGGAAGCATT+GGG 0.581397 4:-58573414 None:intergenic
TGATGATGAAAATGTTCAGA+AGG 0.583432 4:+58573123 MsG0480021493.01.T01:CDS
ACACATTGTGGTGTGTTGAA+AGG 0.583755 4:-58573424 None:intergenic
TTGTGATTGATTTGGAGCCC+AGG 0.584460 4:+58575972 MsG0480021493.01.T01:CDS
ATCCAACAGATTTCTTGTGG+TGG 0.585607 4:-58574134 None:intergenic
TGTTTCTATGGTGATACCTG+TGG 0.587934 4:+58573555 MsG0480021493.01.T01:CDS
GGAATCTTTGCGGAGGAGTG+AGG 0.590595 4:-58572900 None:intergenic
AGACGGTGAAGGTGTGTGTG+AGG 0.590652 4:-58572983 None:intergenic
TGTGATTGATTTGGAGCCCA+GGG 0.591751 4:+58575973 MsG0480021493.01.T01:CDS
GGTGTGTTGAAAGGAAGCAT+TGG 0.598950 4:-58573415 None:intergenic
CCGGACCATGTTTCTCCACA+AGG 0.599370 4:-58574862 None:intergenic
GTCGGGAGGTGATTGGAGAA+CGG 0.600571 4:-58573023 None:intergenic
TGACTGAACATTGAAGAAAG+AGG 0.602448 4:-58575319 None:intergenic
ATTTAAAAGATGATACAGAA+AGG 0.602567 4:-58574018 None:intergenic
ATATCTCTAAGCTTCTTCCC+CGG 0.603698 4:-58575246 None:intergenic
CCGGTAAAGGTGTTTGAACA+GGG 0.605349 4:+58573992 MsG0480021493.01.T01:CDS
TATTCCTGACTACAGATACA+TGG 0.605526 4:+58575655 MsG0480021493.01.T01:CDS
TTAGGGTTTCCCATTCGTGG+TGG 0.605911 4:-58572802 None:intergenic
GCAGACCAGCATACGCAAGT+AGG 0.608627 4:-58575220 None:intergenic
AAGTGAATCTATCTCTTCCA+GGG 0.610317 4:-58575765 None:intergenic
AAGAGATGATCGGAGAGAGG+TGG 0.610765 4:-58572875 None:intergenic
GACGGTGAAGGTGTGTGTGA+GGG 0.611087 4:-58572982 None:intergenic
AACACAGTAGCATATATGGC+GGG 0.611175 4:-58575788 None:intergenic
TCCAAGAGGAACAATACTGA+GGG 0.612326 4:-58575912 None:intergenic
GAGCTTCGATGAGACGGTGA+AGG 0.615143 4:-58572994 None:intergenic
GCAGTCTCGGTGCTCACTGG+AGG 0.615906 4:-58574046 None:intergenic
TTCAACGCTTTCAAAGCCAA+CGG 0.618201 4:-58573896 None:intergenic
GAATACAAAGGAATTGAGGA+GGG 0.618598 4:+58573474 MsG0480021493.01.T01:CDS
TAGCAAACCTGCTTATCTGG+AGG 0.620355 4:+58575466 MsG0480021493.01.T01:CDS
AGAATTCGTCGAGGAAGATG+AGG 0.621231 4:-58572946 None:intergenic
TGAATACAAAGGAATTGAGG+AGG 0.630296 4:+58573473 MsG0480021493.01.T01:CDS
GACGGCGCGTGAATGTCTAT+CGG 0.630702 4:-58573203 None:intergenic
CCACAAGTGTTGACTCCATG+TGG 0.633754 4:+58573520 MsG0480021493.01.T01:CDS
CCACATGGAGTCAACACTTG+TGG 0.633762 4:-58573520 None:intergenic
TGGTTCGGGTTTGAATACAA+AGG 0.638344 4:+58573462 MsG0480021493.01.T01:CDS
AGCTCTAACAATCCATGGGG+AGG 0.647859 4:-58574818 None:intergenic
ATGACACGGAGTGGCTCATG+TGG 0.649090 4:-58575581 None:intergenic
GATGCATGATCTTTACTGGG+AGG 0.649760 4:-58575878 None:intergenic
GTGATGTGAACGGCGTCGGG+AGG 0.655267 4:-58573037 None:intergenic
GAAGAGGGGAATCTTTGCGG+AGG 0.656112 4:-58572907 None:intergenic
GAGTAACGGTGTGATGTGAA+CGG 0.656685 4:-58573047 None:intergenic
GTATGCTGGTCTGCATTCCG+GGG 0.657495 4:+58575229 MsG0480021493.01.T01:CDS
GGACCGTGAAGCCCCTATCG+AGG 0.660046 4:+58575496 MsG0480021493.01.T01:CDS
CAACTTTGGAGTCCATGACA+CGG 0.661422 4:-58575595 None:intergenic
AATCAGACAATACCTCCCCA+TGG 0.662169 4:+58574806 MsG0480021493.01.T01:CDS
TCTCCGGAATCCTTTCCAAG+AGG 0.662277 4:-58575926 None:intergenic
TATCGGAGCCAAAATTGGGT+CGG 0.663641 4:-58573186 None:intergenic
TAACACAGTAGCATATATGG+CGG 0.665029 4:-58575789 None:intergenic
CTGACTACAGATACATGGCA+GGG 0.671424 4:+58575660 MsG0480021493.01.T01:CDS
ACAAACTCCATCATCCCACA+TGG 0.672021 4:-58573535 None:intergenic
TTGGAGTCCATGACACGGAG+TGG 0.673084 4:-58575590 None:intergenic
TTCCAAGAGGAACAATACTG+AGG 0.679117 4:-58575913 None:intergenic
ACAACATCTGAAAGTAAACA+CGG 0.689366 4:-58573262 None:intergenic
CACAAGTGTTGACTCCATGT+GGG 0.690455 4:+58573521 MsG0480021493.01.T01:CDS
TCTCAAACACTCACACGCGA+CGG 0.705488 4:-58573221 None:intergenic
GGAGATGCAAACGATGACGG+AGG 0.731177 4:-58573095 None:intergenic
ACCACAATGTGTGAACAGCG+AGG 0.744498 4:+58573435 MsG0480021493.01.T01:CDS
AGTAGCTCTAACAATCCATG+GGG 0.754164 4:-58574821 None:intergenic
TGGAAGTGGAGAATTCGTCG+AGG 0.764312 4:-58572955 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAATTCTTTTGTTTTTC+AGG + Chr4:58574583-58574602 MsG0480021493.01.T01:intron 15.0%
!!! TTATAATCCATTTTAACTTT+TGG - Chr4:58574746-58574765 None:intergenic 15.0%
!! AATTCACAAAAGAAAAGTTA+AGG - Chr4:58575106-58575125 None:intergenic 20.0%
!! ATTCACAAAAGAAAAGTTAA+GGG - Chr4:58575105-58575124 None:intergenic 20.0%
!! ATTTAAAAGATGATACAGAA+AGG - Chr4:58574021-58574040 None:intergenic 20.0%
!! CATAAAGGAATTCTAATTAT+AGG + Chr4:58574246-58574265 MsG0480021493.01.T01:intron 20.0%
!!! AGTTAAAATGGATTATAAGT+TGG + Chr4:58574748-58574767 MsG0480021493.01.T01:CDS 20.0%
!!! TTTCTGTATCATCTTTTAAA+TGG + Chr4:58574020-58574039 MsG0480021493.01.T01:CDS 20.0%
! ATAAACTGTTCTTTGAGTAA+CGG - Chr4:58573064-58573083 None:intergenic 25.0%
! CTTACTTCCAAAAGTTAAAA+TGG + Chr4:58574736-58574755 MsG0480021493.01.T01:CDS 25.0%
! TCTTATATTTGGTATGTTTC+AGG + Chr4:58575196-58575215 MsG0480021493.01.T01:intron 25.0%
! TTCACAAAAGAAAAGTTAAG+GGG - Chr4:58575104-58575123 None:intergenic 25.0%
!! AACATTTTCATCATCAGAAT+CGG - Chr4:58573119-58573138 None:intergenic 25.0%
!! AAGAAGAAAAGGTATATGAT+AGG - Chr4:58575852-58575871 None:intergenic 25.0%
!! ACTAGAGATATCAAATTTTG+CGG + Chr4:58574505-58574524 MsG0480021493.01.T01:intron 25.0%
!! CAGAAATTTTGAACACTTTA+AGG + Chr4:58575618-58575637 MsG0480021493.01.T01:CDS 25.0%
!! TATCATATACCTTTTCTTCT+TGG + Chr4:58575851-58575870 MsG0480021493.01.T01:CDS 25.0%
!! TTATTTGAAGTCACATCTTT+AGG + Chr4:58574550-58574569 MsG0480021493.01.T01:intron 25.0%
!! TTCTAATGATGATGATAGTT+TGG + Chr4:58573964-58573983 MsG0480021493.01.T01:CDS 25.0%
!!! GTAATCTGTTTTTCATGTTT+TGG + Chr4:58575078-58575097 MsG0480021493.01.T01:intron 25.0%
!!! TTACATTTTGCTTTTCACAA+CGG + Chr4:58573336-58573355 MsG0480021493.01.T01:CDS 25.0%
!!! TTAGTTCTGCATATAATTAC+TGG + Chr4:58574313-58574332 MsG0480021493.01.T01:intron 25.0%
AAAAACATAGCTAAACAACG+TGG - Chr4:58573660-58573679 None:intergenic 30.0%
AAAACTGCTTAACAAGCAAT+GGG - Chr4:58575412-58575431 None:intergenic 30.0%
AAAATTGAGTGTGAAGTGAT+GGG - Chr4:58574410-58574429 None:intergenic 30.0%
AATGATATTTCGTACTTTGC+AGG + Chr4:58574159-58574178 MsG0480021493.01.T01:CDS 30.0%
ACAACATCTGAAAGTAAACA+CGG - Chr4:58573265-58573284 None:intergenic 30.0%
ATCCAAGTGAGATTCTAATA+TGG - Chr4:58574203-58574222 None:intergenic 30.0%
ATGTAACACAGTAGCATATA+TGG - Chr4:58575795-58575814 None:intergenic 30.0%
ATTGAGAAGAAGATAGAGAA+TGG + Chr4:58573833-58573852 MsG0480021493.01.T01:CDS 30.0%
CAAGATTTCATTACTGTATC+CGG - Chr4:58574884-58574903 None:intergenic 30.0%
CGGCAATTCTATGAAATATT+GGG - Chr4:58574784-58574803 None:intergenic 30.0%
GCTTCTTACAAGATACTAAA+CGG - Chr4:58574673-58574692 None:intergenic 30.0%
GTTATTGTTACACTGCATAA+AGG + Chr4:58574231-58574250 MsG0480021493.01.T01:intron 30.0%
GTTCAAAATTTCTGCAACTT+TGG - Chr4:58575612-58575631 None:intergenic 30.0%
GTTTGAATACAAAGGAATTG+AGG + Chr4:58573470-58573489 MsG0480021493.01.T01:CDS 30.0%
TAAAATTGAGTGTGAAGTGA+TGG - Chr4:58574411-58574430 None:intergenic 30.0%
TACCAAATATAAGAAAAGCC+AGG - Chr4:58575190-58575209 None:intergenic 30.0%
TAGCTAGACTAAAGTTTAGA+GGG + Chr4:58575148-58575167 MsG0480021493.01.T01:intron 30.0%
TCGGCAATTCTATGAAATAT+TGG - Chr4:58574785-58574804 None:intergenic 30.0%
TGTTTACTTTCAGATGTTGT+TGG + Chr4:58573265-58573284 MsG0480021493.01.T01:CDS 30.0%
TTCCATATTAGAATCTCACT+TGG + Chr4:58574198-58574217 MsG0480021493.01.T01:intron 30.0%
TTTGGTTGAAATTCTGTTGA+CGG + Chr4:58573156-58573175 MsG0480021493.01.T01:CDS 30.0%
! AAAATTCCTTTTCCTCGATA+GGG - Chr4:58575511-58575530 None:intergenic 30.0%
! AAACTTTATGGTTTTCCTTG+TGG + Chr4:58574847-58574866 MsG0480021493.01.T01:CDS 30.0%
! AGAAAAGGTATATGATAGGA+TGG - Chr4:58575848-58575867 None:intergenic 30.0%
! GATATCAAATTTTGCGGTTA+AGG + Chr4:58574511-58574530 MsG0480021493.01.T01:intron 30.0%
! GGATTGGAAATTTTCGATTA+GGG - Chr4:58572822-58572841 None:intergenic 30.0%
! TAAGGAACAATCTAGAACTA+TGG - Chr4:58574958-58574977 None:intergenic 30.0%
! TCTATTCTTTTTCTCTTCTC+CGG - Chr4:58575945-58575964 None:intergenic 30.0%
! TGATGATGAAAATGTTCAGA+AGG + Chr4:58573123-58573142 MsG0480021493.01.T01:CDS 30.0%
! TTGTCTCTATTTTCCTGATT+TGG + Chr4:58575003-58575022 MsG0480021493.01.T01:CDS 30.0%
!! CGTTTTATTGATGCTTTTGA+TGG + Chr4:58573681-58573700 MsG0480021493.01.T01:intron 30.0%
!! TACCTGGCTTTTCTTATATT+TGG + Chr4:58575185-58575204 MsG0480021493.01.T01:intron 30.0%
!! TATCTTGTAAGAAGCATTCT+TGG + Chr4:58574678-58574697 MsG0480021493.01.T01:CDS 30.0%
!! TGGATTGGAAATTTTCGATT+AGG - Chr4:58572823-58572842 None:intergenic 30.0%
!! TTATTTGGTGTTTCGATTGT+TGG + Chr4:58573757-58573776 MsG0480021493.01.T01:CDS 30.0%
!!! GTTGTTGGCTTTTAATCAAT+TGG + Chr4:58573790-58573809 MsG0480021493.01.T01:CDS 30.0%
AAACTGCTTAACAAGCAATG+GGG - Chr4:58575411-58575430 None:intergenic 35.0%
AAGTGAATCTATCTCTTCCA+GGG - Chr4:58575768-58575787 None:intergenic 35.0%
AATTGCAACCTTCAATGCTT+AGG + Chr4:58573590-58573609 MsG0480021493.01.T01:CDS 35.0%
AGAGCTACTCACAAACTTTA+TGG + Chr4:58574835-58574854 MsG0480021493.01.T01:CDS 35.0%
AGCTACTGTTGTGATTGATT+TGG + Chr4:58575964-58575983 MsG0480021493.01.T01:CDS 35.0%
AGTACTTTCAATCGCATGTT+GGG + Chr4:58575722-58575741 MsG0480021493.01.T01:CDS 35.0%
ATGCTTAGGGTTCAGTTATT+TGG + Chr4:58573604-58573623 MsG0480021493.01.T01:intron 35.0%
ATTGCAACCTTCAATGCTTA+GGG + Chr4:58573591-58573610 MsG0480021493.01.T01:CDS 35.0%
CAAAACTGCTTAACAAGCAA+TGG - Chr4:58575413-58575432 None:intergenic 35.0%
CGGATACAGTAATGAAATCT+TGG + Chr4:58574882-58574901 MsG0480021493.01.T01:CDS 35.0%
CTAGCTAGACTAAAGTTTAG+AGG + Chr4:58575147-58575166 MsG0480021493.01.T01:intron 35.0%
GAACATTGAAGAAAGAGGTT+TGG - Chr4:58575317-58575336 None:intergenic 35.0%
GAATACAAAGGAATTGAGGA+GGG + Chr4:58573474-58573493 MsG0480021493.01.T01:CDS 35.0%
TAACACAGTAGCATATATGG+CGG - Chr4:58575792-58575811 None:intergenic 35.0%
TAGTACTTTCAATCGCATGT+TGG + Chr4:58575721-58575740 MsG0480021493.01.T01:CDS 35.0%
TATTCCTGACTACAGATACA+TGG + Chr4:58575655-58575674 MsG0480021493.01.T01:CDS 35.0%
TGAATACAAAGGAATTGAGG+AGG + Chr4:58573473-58573492 MsG0480021493.01.T01:CDS 35.0%
TGAATCCAACAGATTTCTTG+TGG - Chr4:58574140-58574159 None:intergenic 35.0%
TGACTGAACATTGAAGAAAG+AGG - Chr4:58575322-58575341 None:intergenic 35.0%
TGAGATGCATGATCTTTACT+GGG - Chr4:58575884-58575903 None:intergenic 35.0%
TGATGATAGTTTGGTTGATC+CGG + Chr4:58573973-58573992 MsG0480021493.01.T01:CDS 35.0%
TGCTTAGGGTTCAGTTATTT+GGG + Chr4:58573605-58573624 MsG0480021493.01.T01:intron 35.0%
TGGAATTTGTCGAACTATGT+TGG + Chr4:58574925-58574944 MsG0480021493.01.T01:CDS 35.0%
TTATCACGTACTTCCAAATC+AGG - Chr4:58575019-58575038 None:intergenic 35.0%
TTCGATTGTTGGCAATTCAT+TGG + Chr4:58573768-58573787 MsG0480021493.01.T01:CDS 35.0%
TTGAGATGCATGATCTTTAC+TGG - Chr4:58575885-58575904 None:intergenic 35.0%
TTTCACAAGTTTCTCATTGC+TGG + Chr4:58574085-58574104 MsG0480021493.01.T01:CDS 35.0%
! AAATTCCTTTTCCTCGATAG+GGG - Chr4:58575510-58575529 None:intergenic 35.0%
! AATGTCTTGAATCTCTGAGA+AGG - Chr4:58575351-58575370 None:intergenic 35.0%
! GAAAATTCCTTTTCCTCGAT+AGG - Chr4:58575512-58575531 None:intergenic 35.0%
! GTTATTAACCGACCCAATTT+TGG + Chr4:58573178-58573197 MsG0480021493.01.T01:CDS 35.0%
! TGGAAGTACGTGATAATTCA+AGG + Chr4:58575023-58575042 MsG0480021493.01.T01:CDS 35.0%
! TTCTGAAAGTTCCAATTCAC+AGG + Chr4:58575529-58575548 MsG0480021493.01.T01:CDS 35.0%
!! ATCGACAGAGTTCCATTTTT+CGG - Chr4:58572855-58572874 None:intergenic 35.0%
!! CATTGCTTGTTAAGCAGTTT+TGG + Chr4:58575411-58575430 MsG0480021493.01.T01:intron 35.0%
!! GATGATGGAGTTTGTTTCTA+TGG + Chr4:58573543-58573562 MsG0480021493.01.T01:CDS 35.0%
!! TGATTTGTTCTTCCAGTTTC+AGG - Chr4:58575560-58575579 None:intergenic 35.0%
!! TGTAAGAAGCATTCTTGGTT+GGG + Chr4:58574683-58574702 MsG0480021493.01.T01:CDS 35.0%
!! TTGTAAGAAGCATTCTTGGT+TGG + Chr4:58574682-58574701 MsG0480021493.01.T01:CDS 35.0%
AACACAGTAGCATATATGGC+GGG - Chr4:58575791-58575810 None:intergenic 40.0%
ACAAGTGAAAGCAAGTAGAC+GGG - Chr4:58574987-58575006 None:intergenic 40.0%
ACACATTGTGGTGTGTTGAA+AGG - Chr4:58573427-58573446 None:intergenic 40.0%
ACGAAATGCAATTGCAGTCT+CGG - Chr4:58574062-58574081 None:intergenic 40.0%
AGACAGAGCAAGAAGCAATA+AGG - Chr4:58573928-58573947 None:intergenic 40.0%
ATATCTCTAAGCTTCTTCCC+CGG - Chr4:58575249-58575268 None:intergenic 40.0%
ATCCAACAGATTTCTTGTGG+TGG - Chr4:58574137-58574156 None:intergenic 40.0%
ATGTCTATCGGAGCCAAAAT+TGG - Chr4:58573194-58573213 None:intergenic 40.0%
CAGATGTTGTTGGACATTTG+TGG + Chr4:58573275-58573294 MsG0480021493.01.T01:CDS 40.0%
CAGTATTGTTCCTCTTGGAA+AGG + Chr4:58575916-58575935 MsG0480021493.01.T01:CDS 40.0%
CGAGAGAGCTCATCATTATT+TGG + Chr4:58573742-58573761 MsG0480021493.01.T01:CDS 40.0%
CTTAGAGATATCTTGAGCCT+TGG + Chr4:58575258-58575277 MsG0480021493.01.T01:CDS 40.0%
GAAGTGAATCTATCTCTTCC+AGG - Chr4:58575769-58575788 None:intergenic 40.0%
GACAAGTGAAAGCAAGTAGA+CGG - Chr4:58574988-58575007 None:intergenic 40.0%
GAGTGAGGATAAGAGATGAT+CGG - Chr4:58572888-58572907 None:intergenic 40.0%
GTAATGAAATCTTGGTCCCA+AGG + Chr4:58574890-58574909 MsG0480021493.01.T01:CDS 40.0%
GTATCTGTAGTCAGGAATAC+AGG - Chr4:58575654-58575673 None:intergenic 40.0%
GTGTGAGTGTTTGAGAGAAT+TGG + Chr4:58573228-58573247 MsG0480021493.01.T01:CDS 40.0%
TAAACAACGTGGCAGAGTAA+AGG - Chr4:58573649-58573668 None:intergenic 40.0%
TAGGATGGAATCGATCCATA+AGG - Chr4:58575833-58575852 None:intergenic 40.0%
TAGTAGCAAACCTGCTTATC+TGG + Chr4:58575463-58575482 MsG0480021493.01.T01:CDS 40.0%
TAGTTTGGTTGATCCGGTAA+AGG + Chr4:58573979-58573998 MsG0480021493.01.T01:CDS 40.0%
TCAGAAGGTAACAGAGAGTT+TGG + Chr4:58573138-58573157 MsG0480021493.01.T01:CDS 40.0%
TCCAAGAGGAACAATACTGA+GGG - Chr4:58575915-58575934 None:intergenic 40.0%
TGTCTATCGGAGCCAAAATT+GGG - Chr4:58573193-58573212 None:intergenic 40.0%
TTCAACGCTTTCAAAGCCAA+CGG - Chr4:58573899-58573918 None:intergenic 40.0%
TTCAGGAATGACCTGTGAAT+TGG - Chr4:58575543-58575562 None:intergenic 40.0%
TTCCAAGAGGAACAATACTG+AGG - Chr4:58575916-58575935 None:intergenic 40.0%
TTCCACCACAAGAAATCTGT+TGG + Chr4:58574132-58574151 MsG0480021493.01.T01:CDS 40.0%
! AACAGATTTCTTGTGGTGGA+AGG - Chr4:58574133-58574152 None:intergenic 40.0%
! GTTGGCAATTCATTGGTTGT+TGG + Chr4:58573775-58573794 MsG0480021493.01.T01:CDS 40.0%
! GTTTTCCTTGTGGAGAAACA+TGG + Chr4:58574857-58574876 MsG0480021493.01.T01:CDS 40.0%
! TCCTTCTTTGTTTGATCCGT+TGG + Chr4:58573880-58573899 MsG0480021493.01.T01:CDS 40.0%
! TCTTGAATCTCTGAGAAGGT+CGG - Chr4:58575347-58575366 None:intergenic 40.0%
! TGGTTCGGGTTTGAATACAA+AGG + Chr4:58573462-58573481 MsG0480021493.01.T01:CDS 40.0%
! TGTTTCTATGGTGATACCTG+TGG + Chr4:58573555-58573574 MsG0480021493.01.T01:CDS 40.0%
! TTTTCGTCTTCTGCACCTTA+TGG + Chr4:58575815-58575834 MsG0480021493.01.T01:CDS 40.0%
!! AAAGAGGTTTGGTGTGAAGA+AGG - Chr4:58575306-58575325 None:intergenic 40.0%
!! AACTGAACCCTAAGCATTGA+AGG - Chr4:58573601-58573620 None:intergenic 40.0%
!! AGTAGCTCTAACAATCCATG+GGG - Chr4:58574824-58574843 None:intergenic 40.0%
!! AGTTGGAGTTTGAGTTGAAG+AGG - Chr4:58572926-58572945 None:intergenic 40.0%
!! GAGTAGCTCTAACAATCCAT+GGG - Chr4:58574825-58574844 None:intergenic 40.0%
!! GATGCTTTTGATGGTCAAGA+AGG + Chr4:58573690-58573709 MsG0480021493.01.T01:intron 40.0%
!! GTGTGTTGAAAGGAAGCATT+GGG - Chr4:58573417-58573436 None:intergenic 40.0%
!! GTTGGAGTTTGAGTTGAAGA+GGG - Chr4:58572925-58572944 None:intergenic 40.0%
!! TGAGTAGCTCTAACAATCCA+TGG - Chr4:58574826-58574845 None:intergenic 40.0%
!! TTGGAGTTTGAGTTGAAGAG+GGG - Chr4:58572924-58572943 None:intergenic 40.0%
!! TTTTGAGAGCTTCGATGAGA+CGG - Chr4:58573003-58573022 None:intergenic 40.0%
AAGGTGTGTGTGAGGGAAAA+TGG - Chr4:58572978-58572997 None:intergenic 45.0%
AATCAGACAATACCTCCCCA+TGG + Chr4:58574806-58574825 MsG0480021493.01.T01:CDS 45.0%
AATTCCAATGCCACAACCAC+AGG - Chr4:58573574-58573593 None:intergenic 45.0%
ACAAACTCCATCATCCCACA+TGG - Chr4:58573538-58573557 None:intergenic 45.0%
AGAATTCGTCGAGGAAGATG+AGG - Chr4:58572949-58572968 None:intergenic 45.0%
AGAGATATCTTGAGCCTTGG+AGG + Chr4:58575261-58575280 MsG0480021493.01.T01:CDS 45.0%
AGCAAACCTGCTTATCTGGA+GGG + Chr4:58575467-58575486 MsG0480021493.01.T01:CDS 45.0%
ATCGGAGATGCAAACGATGA+CGG - Chr4:58573101-58573120 None:intergenic 45.0%
ATCTATCTCTTCCAGGGATG+TGG - Chr4:58575762-58575781 None:intergenic 45.0%
CAAGTAGACGGGATAGTCTA+AGG - Chr4:58574976-58574995 None:intergenic 45.0%
CCCTGTTCAAACACCTTTAC+CGG - Chr4:58573995-58574014 None:intergenic 45.0%
CTGACTACAGATACATGGCA+GGG + Chr4:58575660-58575679 MsG0480021493.01.T01:CDS 45.0%
GAACAGCGAGGAATTTGGTT+CGG + Chr4:58573447-58573466 MsG0480021493.01.T01:CDS 45.0%
GAGTAACGGTGTGATGTGAA+CGG - Chr4:58573050-58573069 None:intergenic 45.0%
GATAAGAGATGATCGGAGAG+AGG - Chr4:58572881-58572900 None:intergenic 45.0%
GATGCATGATCTTTACTGGG+AGG - Chr4:58575881-58575900 None:intergenic 45.0%
GATGCTTGTGAACATGATGC+TGG + Chr4:58574607-58574626 MsG0480021493.01.T01:CDS 45.0%
GCCAACGGATCAAACAAAGA+AGG - Chr4:58573884-58573903 None:intergenic 45.0%
GGAGGTTCACCAAGAAGAAA+AGG - Chr4:58575863-58575882 None:intergenic 45.0%
GTTCCTCTTGGAAAGGATTC+CGG + Chr4:58575923-58575942 MsG0480021493.01.T01:CDS 45.0%
GTTGAAGAGGGGAATCTTTG+CGG - Chr4:58572913-58572932 None:intergenic 45.0%
GTTTAGAGGGTCTGCAAAAG+TGG + Chr4:58575161-58575180 MsG0480021493.01.T01:intron 45.0%
TAGCAAACCTGCTTATCTGG+AGG + Chr4:58575466-58575485 MsG0480021493.01.T01:CDS 45.0%
TATCGGAGCCAAAATTGGGT+CGG - Chr4:58573189-58573208 None:intergenic 45.0%
TATGGTGATACCTGTGGTTG+TGG + Chr4:58573561-58573580 MsG0480021493.01.T01:CDS 45.0%
TCACAGGTCATTCCTGAAAC+TGG + Chr4:58575545-58575564 MsG0480021493.01.T01:CDS 45.0%
TCCAAGAGCTCTACTTCCTT+GGG - Chr4:58574909-58574928 None:intergenic 45.0%
TCCACAAAAGCAGCAACAAC+AGG - Chr4:58574650-58574669 None:intergenic 45.0%
TCCCTCAGTATTGTTCCTCT+TGG + Chr4:58575911-58575930 MsG0480021493.01.T01:CDS 45.0%
TGTGTGAACAGCGAGGAATT+TGG + Chr4:58573442-58573461 MsG0480021493.01.T01:CDS 45.0%
TGTGTGAGGGAAAATGGAAG+TGG - Chr4:58572972-58572991 None:intergenic 45.0%
TTCCAAGAGCTCTACTTCCT+TGG - Chr4:58574910-58574929 None:intergenic 45.0%
! AAAGGAATTGAGGAGGGCAT+TGG + Chr4:58573480-58573499 MsG0480021493.01.T01:CDS 45.0%
! AACAGCGAGGAATTTGGTTC+GGG + Chr4:58573448-58573467 MsG0480021493.01.T01:CDS 45.0%
! CATTGGCGTTTTTGTTGGAG+TGG + Chr4:58573497-58573516 MsG0480021493.01.T01:CDS 45.0%
! CTTGAATCTCTGAGAAGGTC+GGG - Chr4:58575346-58575365 None:intergenic 45.0%
! GGTGTGTTGAAAGGAAGCAT+TGG - Chr4:58573418-58573437 None:intergenic 45.0%
! TTGAATCTCTGAGAAGGTCG+GGG - Chr4:58575345-58575364 None:intergenic 45.0%
!! AGAGTTCCATTTTTCGGTGG+TGG - Chr4:58572849-58572868 None:intergenic 45.0%
!! CAACTTTGGAGTCCATGACA+CGG - Chr4:58575598-58575617 None:intergenic 45.0%
!! CACAAGTGTTGACTCCATGT+GGG + Chr4:58573521-58573540 MsG0480021493.01.T01:CDS 45.0%
!! CCGGTAAAGGTGTTTGAACA+GGG + Chr4:58573992-58574011 MsG0480021493.01.T01:CDS 45.0%
!! GACAGAGTTCCATTTTTCGG+TGG - Chr4:58572852-58572871 None:intergenic 45.0%
!! GGGAGGTATTGTCTGATTCT+CGG - Chr4:58574804-58574823 None:intergenic 45.0%
!! TCCGGTAAAGGTGTTTGAAC+AGG + Chr4:58573991-58574010 MsG0480021493.01.T01:CDS 45.0%
!! TGTGATTGATTTGGAGCCCA+GGG + Chr4:58575973-58575992 MsG0480021493.01.T01:CDS 45.0%
!! TTGTGATTGATTTGGAGCCC+AGG + Chr4:58575972-58575991 MsG0480021493.01.T01:CDS 45.0%
!! TTTTGATGGTCAAGAAGGCG+AGG + Chr4:58573695-58573714 MsG0480021493.01.T01:intron 45.0%
!!! TCCTGTTGTTGCTGCTTTTG+TGG + Chr4:58574646-58574665 MsG0480021493.01.T01:CDS 45.0%
AAGAGATGATCGGAGAGAGG+TGG - Chr4:58572878-58572897 None:intergenic 50.0%
ACCACAATGTGTGAACAGCG+AGG + Chr4:58573435-58573454 MsG0480021493.01.T01:CDS 50.0%
CAATAACACTGCCACATCCC+TGG + Chr4:58575748-58575767 MsG0480021493.01.T01:CDS 50.0%
CCAACACCACCACCGAAAAA+TGG + Chr4:58572840-58572859 MsG0480021493.01.T01:CDS 50.0%
CCACATGGAGTCAACACTTG+TGG - Chr4:58573523-58573542 None:intergenic 50.0%
CCTGACTACAGATACATGGC+AGG + Chr4:58575659-58575678 MsG0480021493.01.T01:CDS 50.0%
CCTGCCATGTATCTGTAGTC+AGG - Chr4:58575662-58575681 None:intergenic 50.0%
CCTTGTGGAGAAACATGGTC+CGG + Chr4:58574862-58574881 MsG0480021493.01.T01:CDS 50.0%
CGATTAGGGTTTCCCATTCG+TGG - Chr4:58572808-58572827 None:intergenic 50.0%
GATACCTGTGGTTGTGGCAT+TGG + Chr4:58573567-58573586 MsG0480021493.01.T01:CDS 50.0%
GGTCTGCAAAAGTGGTTACC+TGG + Chr4:58575169-58575188 MsG0480021493.01.T01:intron 50.0%
TAGGGTTTCCCATTCGTGGT+GGG - Chr4:58572804-58572823 None:intergenic 50.0%
TCCCAAGGAAGTAGAGCTCT+TGG + Chr4:58574905-58574924 MsG0480021493.01.T01:CDS 50.0%
TCCTCGCTGTTCACACATTG+TGG - Chr4:58573439-58573458 None:intergenic 50.0%
TCTCAAACACTCACACGCGA+CGG - Chr4:58573224-58573243 None:intergenic 50.0%
TCTCCGGAATCCTTTCCAAG+AGG - Chr4:58575929-58575948 None:intergenic 50.0%
TGAAGCCCCTATCGAGGAAA+AGG + Chr4:58575502-58575521 MsG0480021493.01.T01:CDS 50.0%
TGGAAGTGGAGAATTCGTCG+AGG - Chr4:58572958-58572977 None:intergenic 50.0%
TTAGGGTTTCCCATTCGTGG+TGG - Chr4:58572805-58572824 None:intergenic 50.0%
TTTCCTCGATAGGGGCTTCA+CGG - Chr4:58575502-58575521 None:intergenic 50.0%
! AGCTCTAACAATCCATGGGG+AGG - Chr4:58574821-58574840 None:intergenic 50.0%
! GTTGACTCCATGTGGGATGA+TGG + Chr4:58573528-58573547 MsG0480021493.01.T01:CDS 50.0%
! TTTCGGTGGTGGTGTTGGAT+TGG - Chr4:58572838-58572857 None:intergenic 50.0%
!! CCACAAGTGTTGACTCCATG+TGG + Chr4:58573520-58573539 MsG0480021493.01.T01:CDS 50.0%
!! CCATTTTTCGGTGGTGGTGT+TGG - Chr4:58572843-58572862 None:intergenic 50.0%
!! TATACTGGTGTCGGTTCCCT+GGG - Chr4:58575992-58576011 None:intergenic 50.0%
!! TGCTTATCTGGAGGGCATCA+GGG + Chr4:58575475-58575494 MsG0480021493.01.T01:CDS 50.0%
!! TGGTGGGATAGTGGCTTTGA+CGG - Chr4:58572788-58572807 None:intergenic 50.0%
!!! GAGGGCATTGGCGTTTTTGT+TGG + Chr4:58573492-58573511 MsG0480021493.01.T01:CDS 50.0%
ACATGAGCCACTCCGTGTCA+TGG + Chr4:58575583-58575602 MsG0480021493.01.T01:CDS 55.0%
AGCCACTATCCCACCACGAA+TGG + Chr4:58572792-58572811 MsG0480021493.01.T01:CDS 55.0%
ATGACACGGAGTGGCTCATG+TGG - Chr4:58575584-58575603 None:intergenic 55.0%
CAGGACCTACTTGCGTATGC+TGG + Chr4:58575215-58575234 MsG0480021493.01.T01:intron 55.0%
CCGGACCATGTTTCTCCACA+AGG - Chr4:58574865-58574884 None:intergenic 55.0%
CGTCGAGGAAGATGAGGAGT+TGG - Chr4:58572943-58572962 None:intergenic 55.0%
CTGATGCCCTCCAGATAAGC+AGG - Chr4:58575476-58575495 None:intergenic 55.0%
GAAGAGGGGAATCTTTGCGG+AGG - Chr4:58572910-58572929 None:intergenic 55.0%
GACGGCGCGTGAATGTCTAT+CGG - Chr4:58573206-58573225 None:intergenic 55.0%
GAGCTTCGATGAGACGGTGA+AGG - Chr4:58572997-58573016 None:intergenic 55.0%
GATGCTGGAGAGTCGTAGAC+TGG + Chr4:58574622-58574641 MsG0480021493.01.T01:CDS 55.0%
GCAGACCAGCATACGCAAGT+AGG - Chr4:58575223-58575242 None:intergenic 55.0%
GCCACTATCCCACCACGAAT+GGG + Chr4:58572793-58572812 MsG0480021493.01.T01:CDS 55.0%
GGAATCTTTGCGGAGGAGTG+AGG - Chr4:58572903-58572922 None:intergenic 55.0%
GTCGGGAGGTGATTGGAGAA+CGG - Chr4:58573026-58573045 None:intergenic 55.0%
TTGGAGTCCATGACACGGAG+TGG - Chr4:58575593-58575612 None:intergenic 55.0%
! AGACGGTGAAGGTGTGTGTG+AGG - Chr4:58572986-58573005 None:intergenic 55.0%
! CGTATGCTGGTCTGCATTCC+GGG + Chr4:58575228-58575247 MsG0480021493.01.T01:CDS 55.0%
! GACGGTGAAGGTGTGTGTGA+GGG - Chr4:58572985-58573004 None:intergenic 55.0%
! GCGTATGCTGGTCTGCATTC+CGG + Chr4:58575227-58575246 MsG0480021493.01.T01:CDS 55.0%
! GGAGATGCAAACGATGACGG+AGG - Chr4:58573098-58573117 None:intergenic 55.0%
! GTATGCTGGTCTGCATTCCG+GGG + Chr4:58575229-58575248 MsG0480021493.01.T01:CDS 55.0%
! TCCCATTCGTGGTGGGATAG+TGG - Chr4:58572797-58572816 None:intergenic 55.0%
!! ATTGCAGTCTCGGTGCTCAC+TGG - Chr4:58574052-58574071 None:intergenic 55.0%
!! CTATACTGGTGTCGGTTCCC+TGG - Chr4:58575993-58576012 None:intergenic 55.0%
!! CTGCTTATCTGGAGGGCATC+AGG + Chr4:58575474-58575493 MsG0480021493.01.T01:CDS 55.0%
!! GATAGTGGCTTTGACGGTGG+TGG - Chr4:58572782-58572801 None:intergenic 55.0%
!! GCAAACGATGACGGAGGTGA+CGG - Chr4:58573092-58573111 None:intergenic 55.0%
!! TGGGATAGTGGCTTTGACGG+TGG - Chr4:58572785-58572804 None:intergenic 55.0%
CGGTGTGATGTGAACGGCGT+CGG - Chr4:58573044-58573063 None:intergenic 60.0%
GGTGTGATGTGAACGGCGTC+GGG - Chr4:58573043-58573062 None:intergenic 60.0%
! AGCCTTGGAGGCACGATGCT+TGG + Chr4:58575273-58575292 MsG0480021493.01.T01:CDS 60.0%
! GCCTTGGAGGCACGATGCTT+GGG + Chr4:58575274-58575293 MsG0480021493.01.T01:CDS 60.0%
! TCCCAAGCATCGTGCCTCCA+AGG - Chr4:58575278-58575297 None:intergenic 60.0%
GGACCGTGAAGCCCCTATCG+AGG + Chr4:58575496-58575515 MsG0480021493.01.T01:CDS 65.0%
! GAACGGCGTCGGGAGGTGAT+TGG - Chr4:58573033-58573052 None:intergenic 65.0%
! GTGATGTGAACGGCGTCGGG+AGG - Chr4:58573040-58573059 None:intergenic 65.0%
!! GCAGTCTCGGTGCTCACTGG+AGG - Chr4:58574049-58574068 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 58572770 58576012 58572770 ID=MsG0480021493.01;Name=MsG0480021493.01
Chr4 mRNA 58572770 58576012 58572770 ID=MsG0480021493.01.T01;Parent=MsG0480021493.01;Name=MsG0480021493.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0.5|0.2|1|1|1|5|0|805
Chr4 exon 58572770 58573612 58572770 ID=MsG0480021493.01.T01:exon:17323;Parent=MsG0480021493.01.T01
Chr4 exon 58573728 58574180 58573728 ID=MsG0480021493.01.T01:exon:17324;Parent=MsG0480021493.01.T01
Chr4 exon 58574605 58575044 58574605 ID=MsG0480021493.01.T01:exon:17325;Parent=MsG0480021493.01.T01
Chr4 exon 58575218 58575337 58575218 ID=MsG0480021493.01.T01:exon:17326;Parent=MsG0480021493.01.T01
Chr4 exon 58575451 58576012 58575451 ID=MsG0480021493.01.T01:exon:17327;Parent=MsG0480021493.01.T01
Chr4 CDS 58572770 58573612 58572770 ID=MsG0480021493.01.T01:cds;Parent=MsG0480021493.01.T01
Chr4 CDS 58573728 58574180 58573728 ID=MsG0480021493.01.T01:cds;Parent=MsG0480021493.01.T01
Chr4 CDS 58574605 58575044 58574605 ID=MsG0480021493.01.T01:cds;Parent=MsG0480021493.01.T01
Chr4 CDS 58575218 58575337 58575218 ID=MsG0480021493.01.T01:cds;Parent=MsG0480021493.01.T01
Chr4 CDS 58575451 58576012 58575451 ID=MsG0480021493.01.T01:cds;Parent=MsG0480021493.01.T01
Gene Sequence

>MsG0480021493.01.T01

ATGACGGCGCCACCACCGTCAAAGCCACTATCCCACCACGAATGGGAAACCCTAATCGAAAATTTCCAATCCAACACCACCACCGAAAAATGGAACTCTGTCGATCCACCTCTCTCCGATCATCTCTTATCCTCACTCCTCCGCAAAGATTCCCCTCTTCAACTCAAACTCCAACTCCTCATCTTCCTCGACGAATTCTCCACTTCCATTTTCCCTCACACACACCTTCACCGTCTCATCGAAGCTCTCAAAACCGTTCTCCAATCACCTCCCGACGCCGTTCACATCACACCGTTACTCAAAGAACAGTTTATGATTTCCGTCACCTCCGTCATCGTTTGCATCTCCGATTCTGATGATGAAAATGTTCAGAAGGTAACAGAGAGTTTGGTTGAAATTCTGTTGACGGTTATTAACCGACCCAATTTTGGCTCCGATAGACATTCACGCGCCGTCGCGTGTGAGTGTTTGAGAGAATTGGAACGATCGAAACCGTGTTTACTTTCAGATGTTGTTGGACATTTGTGGAGTCTTTGTCAGAATGAACGAACACACGCTTCACAATCTTACATTTTGCTTTTCACAACGGTTATTCGTAACATTGTTGATAAGAAACTTAGTGTTTCGATTCTCAATACATCGCTCCCAATGCTTCCTTTCAACACACCACAATGTGTGAACAGCGAGGAATTTGGTTCGGGTTTGAATACAAAGGAATTGAGGAGGGCATTGGCGTTTTTGTTGGAGTGGCCACAAGTGTTGACTCCATGTGGGATGATGGAGTTTGTTTCTATGGTGATACCTGTGGTTGTGGCATTGGAATTGCAACCTTCAATGCTTAGGACTGTTGTTGATTTCGAGAGAGCTCATCATTATTTGGTGTTTCGATTGTTGGCAATTCATTGGTTGTTGGCTTTTAATCAATTGGTTTTTAGTAAACAATCGCGTATTGAGAAGAAGATAGAGAATGGAAATGAAGTTTGTTCTAATTTTTATCCTTCTTTGTTTGATCCGTTGGCTTTGAAAGCGTTGAAGCTTGACCTTATTGCTTCTTGCTCTGTCTTGAGACTCAAAAGTGATTCTAATGATGATGATAGTTTGGTTGATCCGGTAAAGGTGTTTGAACAGGGTCTCCTTTCTGTATCATCTTTTAAATGGTTGCCTCCAGTGAGCACCGAGACTGCAATTGCATTTCGTACTTTTCACAAGTTTCTCATTGCTGGATCGTCTCATTTTGATAGTGATCCTTCCACCACAAGAAATCTGTTGGATTCAATGATATTTCGTACTTTGCAGGTGATGCTTGTGAACATGATGCTGGAGAGTCGTAGACTGGTTCCTGTTGTTGCTGCTTTTGTGGACCGTTTAGTATCTTGTAAGAAGCATTCTTGGTTGGGTGAGCGCTTACTTCAGAAATTTGATGAGCACTTACTTCCAAAAGTTAAAATGGATTATAAGTTGGTTTACTGCTTCCCAATATTTCATAGAATTGCCGAGAATCAGACAATACCTCCCCATGGATTGTTAGAGCTACTCACAAACTTTATGGTTTTCCTTGTGGAGAAACATGGTCCGGATACAGTAATGAAATCTTGGTCCCAAGGAAGTAGAGCTCTTGGAATTTGTCGAACTATGTTGGTACATCACCATAGTTCTAGATTGTTCCTTAGACTATCCCGTCTACTTGCTTTCACTTGTCTCTATTTTCCTGATTTGGAAGTACGTGATAATTCAAGGACCTACTTGCGTATGCTGGTCTGCATTCCGGGGAAGAAGCTTAGAGATATCTTGAGCCTTGGAGGCACGATGCTTGGGATTTCACCTTCTTCACACCAAACCTCTTTCTTCAATGTTCATTTAGTCGTGAGTAGTAGCAAACCTGCTTATCTGGAGGGCATCAGGGACCGTGAAGCCCCTATCGAGGAAAAGGAATTTTCTGAAAGTTCCAATTCACAGGTCATTCCTGAAACTGGAAGAACAAATCAACCACATGAGCCACTCCGTGTCATGGACTCCAAAGTTGCAGAAATTTTGAACACTTTAAGGAAGTACTTTTCCTGTATTCCTGACTACAGATACATGGCAGGGCTCAAAGTTAGCATATCATGCAGTTTGCGATTTGAATCTAGTACTTTCAATCGCATGTTGGGAATCAATAACACTGCCACATCCCTGGAAGAGATAGATTCACTTCCCGCCATATATGCTACTGTGTTACATTTTTCGTCTTCTGCACCTTATGGATCGATTCCATCCTATCATATACCTTTTCTTCTTGGTGAACCTCCCAGTAAAGATCATGCATCTCAAAATGACTCCCTCAGTATTGTTCCTCTTGGAAAGGATTCCGGAGAAGAGAAAAAGAATAGAGCTACTGTTGTGATTGATTTGGAGCCCAGGGAACCGACACCAGTATAG
Protein sequence

>MsG0480021493.01.T01

MTAPPPSKPLSHHEWETLIENFQSNTTTEKWNSVDPPLSDHLLSSLLRKDSPLQLKLQLLIFLDEFSTSIFPHTHLHRLIEALKTVLQSPPDAVHITPLLKEQFMISVTSVIVCISDSDDENVQKVTESLVEILLTVINRPNFGSDRHSRAVACECLRELERSKPCLLSDVVGHLWSLCQNERTHASQSYILLFTTVIRNIVDKKLSVSILNTSLPMLPFNTPQCVNSEEFGSGLNTKELRRALAFLLEWPQVLTPCGMMEFVSMVIPVVVALELQPSMLRTVVDFERAHHYLVFRLLAIHWLLAFNQLVFSKQSRIEKKIENGNEVCSNFYPSLFDPLALKALKLDLIASCSVLRLKSDSNDDDSLVDPVKVFEQGLLSVSSFKWLPPVSTETAIAFRTFHKFLIAGSSHFDSDPSTTRNLLDSMIFRTLQVMLVNMMLESRRLVPVVAAFVDRLVSCKKHSWLGERLLQKFDEHLLPKVKMDYKLVYCFPIFHRIAENQTIPPHGLLELLTNFMVFLVEKHGPDTVMKSWSQGSRALGICRTMLVHHHSSRLFLRLSRLLAFTCLYFPDLEVRDNSRTYLRMLVCIPGKKLRDILSLGGTMLGISPSSHQTSFFNVHLVVSSSKPAYLEGIRDREAPIEEKEFSESSNSQVIPETGRTNQPHEPLRVMDSKVAEILNTLRKYFSCIPDYRYMAGLKVSISCSLRFESSTFNRMLGINNTATSLEEIDSLPAIYATVLHFSSSAPYGSIPSYHIPFLLGEPPSKDHASQNDSLSIVPLGKDSGEEKKNRATVVIDLEPREPTPV*