AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022351.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022351.01.T01 MTR_4g088500 98.710 620 8 0 1 620 1 620 0.0 1262
MsG0480022351.01.T01 MTR_7g116350 70.607 626 44 9 2 620 316 808 0.0 798
MsG0480022351.01.T01 MTR_2g005730 52.658 602 261 9 21 614 11 596 0.0 614
MsG0480022351.01.T01 MTR_8g095090 51.410 603 272 9 20 617 8 594 0.0 573
MsG0480022351.01.T01 MTR_8g095090 52.000 525 235 7 96 617 1 511 5.33e-175 507
MsG0480022351.01.T01 MTR_8g097210 41.491 617 320 11 25 611 11 616 1.11e-159 472
MsG0480022351.01.T01 MTR_3g084930 40.492 610 335 9 23 611 15 617 3.69e-156 462
MsG0480022351.01.T01 MTR_8g095110 43.046 604 290 11 21 616 12 569 3.71e-153 453
MsG0480022351.01.T01 MTR_8g095150 40.735 599 292 14 21 613 12 553 2.17e-143 427
MsG0480022351.01.T01 MTR_8g097210 42.561 531 281 8 96 611 1 522 2.36e-143 426
MsG0480022351.01.T01 MTR_8g095140 40.164 610 304 12 21 613 12 577 7.66e-140 419
MsG0480022351.01.T01 MTR_8g105700 40.436 596 300 9 22 611 6 552 2.10e-136 410
MsG0480022351.01.T01 MTR_2g005730 52.381 399 173 6 22 414 12 399 1.19e-132 396
MsG0480022351.01.T01 MTR_2g017740 38.602 601 297 13 25 611 22 564 1.18e-127 387
MsG0480022351.01.T01 MTR_8g095130 41.734 496 250 10 127 619 12 471 3.95e-115 352
MsG0480022351.01.T01 MTR_4g027860 42.241 348 170 6 273 611 79 404 4.28e-79 256
MsG0480022351.01.T01 MTR_4g027880 38.854 157 90 2 22 174 11 165 2.13e-28 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022351.01.T01 AT1G28380 62.439 615 210 9 16 620 9 612 0.0 765
MsG0480022351.01.T01 AT4G24290 51.639 610 265 10 21 619 10 600 0.0 601
MsG0480022351.01.T01 AT4G24290 51.639 610 265 10 21 619 10 600 0.0 601
MsG0480022351.01.T01 AT1G14780 38.961 616 342 13 23 611 10 618 1.63e-137 415
MsG0480022351.01.T01 AT1G29690 38.833 600 290 11 25 611 24 559 2.06e-133 402
MsG0480022351.01.T01 AT4G24290 49.853 339 147 7 21 348 10 336 3.29e-102 314

Find 155 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCGACAAAATTAAGCATTT+TGG 0.150769 4:+71476157 None:intergenic
TGTGATCTTCTGAAATTTCT+AGG 0.199569 4:+71476570 None:intergenic
CACGGTATTAACATAAAGTT+TGG 0.221178 4:+71476915 None:intergenic
TCTATATACTATTCTTTATT+AGG 0.229619 4:+71475830 None:intergenic
GTCACTTCAGTTCACTCTTA+TGG 0.231370 4:-71476941 MsG0480022351.01.T01:CDS
ACTAAGAGCCTTGCCTTTGA+TGG 0.266531 4:-71478368 MsG0480022351.01.T01:CDS
TTCAGGTTCATTGAAAAGTA+TGG 0.283487 4:-71477900 MsG0480022351.01.T01:intron
CAGAGGATCCACCAGGATAT+TGG 0.288457 4:-71476112 MsG0480022351.01.T01:CDS
CAGCATCTTTCAGAGGTTCC+AGG 0.308912 4:-71476596 MsG0480022351.01.T01:CDS
TTAATAGATAAGGGAACATT+AGG 0.309328 4:+71479545 None:intergenic
GGCTATATCAGGAAAATTAA+AGG 0.311318 4:-71477712 MsG0480022351.01.T01:intron
TGATGAAGTTCTTCTATTGC+AGG 0.314788 4:+71477057 None:intergenic
GTTGAGAGCCACTGGTTATA+AGG 0.316965 4:+71477318 None:intergenic
TATTCGACCATAAGTATAAA+AGG 0.318647 4:-71476975 MsG0480022351.01.T01:CDS
TTCAATAAGCAGGTTGATTC+GGG 0.318983 4:-71476689 MsG0480022351.01.T01:intron
GTCAATCCTGCGGCTATATC+AGG 0.325598 4:-71477723 MsG0480022351.01.T01:CDS
CTGAATTCTGTCCCAGGAAA+TGG 0.330279 4:-71477240 MsG0480022351.01.T01:CDS
TTGAACTACTATTGTCAATA+TGG 0.331381 4:+71479606 None:intergenic
AGATGTAGACTCATCCATTC+TGG 0.349924 4:+71476445 None:intergenic
TCACTTCAGTTCACTCTTAT+GGG 0.350996 4:-71476940 MsG0480022351.01.T01:CDS
GGCGTAAACCGACCTGAATA+TGG 0.355136 4:-71475890 MsG0480022351.01.T01:three_prime_UTR
ACAATGAATTTGCCATATTC+AGG 0.359445 4:+71475878 None:intergenic
TCAACTTTAGATTGTTTCTC+AGG 0.363374 4:+71476230 None:intergenic
TCGTAGTAGCCTCGGCCATC+TGG 0.365164 4:+71476527 None:intergenic
CGGCCATCTGGTTCGTCAAT+AGG 0.368985 4:+71476539 None:intergenic
TTTCAATAAGCAGGTTGATT+CGG 0.374923 4:-71476690 MsG0480022351.01.T01:intron
TTGGTTTGAGGTTAAGCTAA+TGG 0.376476 4:-71476408 MsG0480022351.01.T01:CDS
TCGGGAAACCGGCCGGTAAC+AGG 0.378523 4:-71476671 MsG0480022351.01.T01:CDS
AGAGGATCCACCAGGATATT+GGG 0.391881 4:-71476111 MsG0480022351.01.T01:CDS
TGTCGAACATGCTATTGAAT+TGG 0.395267 4:+71478423 None:intergenic
TAATGTCATATCAATGTCTT+TGG 0.396557 4:-71477280 MsG0480022351.01.T01:CDS
TGGTTTGAGGTTAAGCTAAT+GGG 0.397784 4:-71476407 MsG0480022351.01.T01:CDS
GAATTCAGTAATGAAGTAAT+AGG 0.399717 4:+71477255 None:intergenic
TCAACCTCATCTAGAAAATC+AGG 0.407263 4:-71476302 MsG0480022351.01.T01:CDS
TGTGACAAAGGCTTGGTTTG+AGG 0.418183 4:-71476420 MsG0480022351.01.T01:CDS
AGCAGGTTGATTCGGGAAAC+CGG 0.418321 4:-71476682 MsG0480022351.01.T01:intron
AAAGACATTGATATGACATT+AGG 0.419683 4:+71477282 None:intergenic
GATGCTGAAGATGGATTGAT+AGG 0.420463 4:+71476612 None:intergenic
AACAGACAACTATCTTTGTC+GGG 0.421260 4:-71478461 MsG0480022351.01.T01:CDS
ATGGTACACACGTAGTTGTT+GGG 0.421463 4:-71477881 MsG0480022351.01.T01:CDS
CTTAGTGGAAGCTGCATCCC+TGG 0.425444 4:+71478385 None:intergenic
GGATGATCATACAAAGCTTA+GGG 0.425872 4:-71477585 MsG0480022351.01.T01:CDS
CAATATCCTGGTGGATCCTC+TGG 0.428546 4:+71476113 None:intergenic
CGTAGTTGTTGGGGTGAAGA+TGG 0.431793 4:-71477871 MsG0480022351.01.T01:CDS
TTATCAGACTTAATAGATAA+GGG 0.435251 4:+71479536 None:intergenic
GCTTTCTCAGCTGCTAATTG+AGG 0.435446 4:+71479701 None:intergenic
ACTAATAGCTATGGAAATGC+AGG 0.435774 4:-71479731 MsG0480022351.01.T01:CDS
ACTTACTCGGCAAGAGCAGC+AGG 0.435956 4:+71478254 None:intergenic
CGACAATGGGCACCGATGTA+TGG 0.437293 4:-71477012 MsG0480022351.01.T01:CDS
TTTATCAGACTTAATAGATA+AGG 0.439387 4:+71479535 None:intergenic
TTATCTATTAAGTCTGATAA+AGG 0.439839 4:-71479533 MsG0480022351.01.T01:CDS
AGGATGATCATACAAAGCTT+AGG 0.446411 4:-71477586 MsG0480022351.01.T01:CDS
TTGGGAGCCCTTCTTGGCAC+AGG 0.449347 4:+71476176 None:intergenic
AACAAACCTCCGTCCCTTGT+TGG 0.451722 4:-71477551 MsG0480022351.01.T01:CDS
CAACAGACAACTATCTTTGT+CGG 0.454285 4:-71478462 MsG0480022351.01.T01:CDS
AACAGGTATTCGTTTATACT+TGG 0.457606 4:-71476654 MsG0480022351.01.T01:CDS
ATCAAAGGCAAGGCTCTTAG+TGG 0.462014 4:+71478370 None:intergenic
GTTAATAATACTAATAGCTA+TGG 0.462044 4:-71479740 MsG0480022351.01.T01:CDS
AACCTCCGTCCCTTGTTGGC+AGG 0.463366 4:-71477547 MsG0480022351.01.T01:CDS
CTGGAGCTATTGTATTGTAC+AGG 0.472485 4:+71476464 None:intergenic
GTTTCAGTTGCCACGACAAT+GGG 0.473101 4:-71477025 MsG0480022351.01.T01:CDS
ACGGTATTAACATAAAGTTT+GGG 0.475299 4:+71476916 None:intergenic
CTGATAAAGGTGATTGTACC+AGG 0.476222 4:-71479520 MsG0480022351.01.T01:CDS
GGAGCCCTTCTTGGCACAGG+TGG 0.479630 4:+71476179 None:intergenic
CATCTATTGTGACAAAGGCT+TGG 0.480707 4:-71476427 MsG0480022351.01.T01:CDS
TATGTAAGTTGAACTCTTCA+CGG 0.481674 4:+71479803 None:intergenic
GTGGTCCACCTGTGCCAAGA+AGG 0.484031 4:-71476184 MsG0480022351.01.T01:CDS
TATAAACGAATACCTGTTAC+CGG 0.485389 4:+71476659 None:intergenic
GAGAAAGCTGTGAGTGTGAT+TGG 0.485451 4:-71479686 MsG0480022351.01.T01:CDS
CCTCTGAAAGATGCTGAAGA+TGG 0.486026 4:+71476603 None:intergenic
CGAAAATTCGCAGATCAGAA+TGG 0.487617 4:-71476334 MsG0480022351.01.T01:CDS
CCAGGATATTGGGTTGTCAC+TGG 0.487824 4:-71476101 MsG0480022351.01.T01:CDS
CTTTCTTATCATTCTATGTG+TGG 0.488535 4:-71479832 MsG0480022351.01.T01:five_prime_UTR
TATGGTACACACGTAGTTGT+TGG 0.495177 4:-71477882 MsG0480022351.01.T01:CDS
AGAGCCTTGCCTTTGATGGA+TGG 0.511034 4:-71478364 MsG0480022351.01.T01:CDS
GGTATTCGTTTATACTTGGA+AGG 0.511213 4:-71476650 MsG0480022351.01.T01:CDS
AGCAATTTCTGCAGTTCAGT+CGG 0.511584 4:+71477798 None:intergenic
ATGTAAGTTGAACTCTTCAC+GGG 0.514173 4:+71479804 None:intergenic
GAAAATTCGCAGATCAGAAT+GGG 0.514979 4:-71476333 MsG0480022351.01.T01:CDS
TAGTAAGCATTTCTGTTCGA+AGG 0.519900 4:-71477362 MsG0480022351.01.T01:CDS
TTACAATTGGCCTGCCAACA+AGG 0.520191 4:+71477537 None:intergenic
GGTGCAAAGTTATGTGTAGA+AGG 0.521969 4:-71476080 MsG0480022351.01.T01:CDS
AGAGCCACTGGTTATAAGGT+TGG 0.524639 4:+71477322 None:intergenic
TAGCTATGGAAATGCAGGGT+TGG 0.526822 4:-71479726 MsG0480022351.01.T01:CDS
TTGTCGGGAAAGATTCCATC+CGG 0.528086 4:-71478446 MsG0480022351.01.T01:CDS
GACATTAGGAGACTGTGATA+TGG 0.529982 4:+71477296 None:intergenic
TCTCAGGTGAATGCAATCCT+TGG 0.530122 4:+71476246 None:intergenic
AGTTTCAGTTGCCACGACAA+TGG 0.531590 4:-71477026 MsG0480022351.01.T01:CDS
GAAAACATGCTCCACTTCAC+TGG 0.533461 4:+71476503 None:intergenic
AGTAAGCATTTCTGTTCGAA+GGG 0.537776 4:-71477361 MsG0480022351.01.T01:CDS
GACACAAAGGAAATGGTAAG+AGG 0.538834 4:-71476137 MsG0480022351.01.T01:CDS
ATAAACTCGGCAATTTATCA+TGG 0.539597 4:-71476206 MsG0480022351.01.T01:CDS
GATTCTCTGCTTGCAAGTCA+AGG 0.541130 4:-71479634 MsG0480022351.01.T01:CDS
TAATAGATAAGGGAACATTA+GGG 0.541232 4:+71479546 None:intergenic
CCATCTTCAGCATCTTTCAG+AGG 0.545066 4:-71476603 MsG0480022351.01.T01:CDS
AGCATTTCTGTTCGAAGGGG+AGG 0.555180 4:-71477357 MsG0480022351.01.T01:CDS
GGAAGAAGGAATTACCTTCA+CGG 0.561197 4:+71476897 None:intergenic
ACAATACAATAGCTCCAGAA+TGG 0.564872 4:-71476459 MsG0480022351.01.T01:CDS
TGGTCCACCTGTGCCAAGAA+GGG 0.573430 4:-71476183 MsG0480022351.01.T01:CDS
TCTGAAATTTCTAGGACACC+TGG 0.574524 4:+71476578 None:intergenic
GTAGTTGTTGGGGTGAAGAT+GGG 0.574754 4:-71477870 MsG0480022351.01.T01:CDS
ATGCTATTGAATTGGCCGGA+TGG 0.576725 4:+71478431 None:intergenic
CCAGTGACAACCCAATATCC+TGG 0.577834 4:+71476101 None:intergenic
GTGATATGGTTGAGAGCCAC+TGG 0.578254 4:+71477310 None:intergenic
TACAATTGGCCTGCCAACAA+GGG 0.578423 4:+71477538 None:intergenic
AGGTGGCAGAATCTCAATCA+AGG 0.582915 4:-71476060 MsG0480022351.01.T01:CDS
AACGAATACCTGTTACCGGC+CGG 0.583865 4:+71476663 None:intergenic
TACTTATGGTCGAATACAAG+AGG 0.584243 4:+71476982 None:intergenic
TGTTATGAACCATCCATCAA+AGG 0.584689 4:+71478355 None:intergenic
TCATTACTGAATTCTGTCCC+AGG 0.588026 4:-71477246 MsG0480022351.01.T01:CDS
GAGGACATCGGATCGAAACC+TGG 0.588872 4:+71479502 None:intergenic
TGAATTTGCCATATTCAGGT+CGG 0.595126 4:+71475882 None:intergenic
GGTTGATTCGGGAAACCGGC+CGG 0.595912 4:-71476678 MsG0480022351.01.T01:CDS
ATGAGTGCAAAGCTTAGCCA+AGG 0.599460 4:-71476263 MsG0480022351.01.T01:CDS
GCTACTACGAACCAGTGAAG+TGG 0.605145 4:-71476514 MsG0480022351.01.T01:CDS
GTCTACATCTATTGTGACAA+AGG 0.606707 4:-71476432 MsG0480022351.01.T01:CDS
TACATCGGTGCCCATTGTCG+TGG 0.607453 4:+71477015 None:intergenic
ATTGGCCTGCCAACAAGGGA+CGG 0.613832 4:+71477542 None:intergenic
CTTAAGACTTGGATACTCAA+CGG 0.619317 4:-71476366 MsG0480022351.01.T01:CDS
CTAATAGCTATGGAAATGCA+GGG 0.619542 4:-71479730 MsG0480022351.01.T01:CDS
CAATGACCTGATTAAAAGTG+AGG 0.619839 4:+71479483 None:intergenic
TGAACCATCCATCAAAGGCA+AGG 0.620613 4:+71478360 None:intergenic
ATTCGCAGATCAGAATGGGA+TGG 0.626214 4:-71476329 MsG0480022351.01.T01:CDS
AATTTCTGCAGTTCAGTCGG+CGG 0.627237 4:+71477801 None:intergenic
AGAGGTCCAGAGGATCCACC+AGG 0.627751 4:-71476119 MsG0480022351.01.T01:CDS
CAAAGCTTAGGGGACTGCAC+AGG 0.627915 4:-71477574 MsG0480022351.01.T01:CDS
TCACTGGTTCGTAGTAGCCT+CGG 0.627996 4:+71476519 None:intergenic
ACTTTATGTTAATACCGTGA+AGG 0.630084 4:-71476911 MsG0480022351.01.T01:intron
GCAGCAGGGTTCCACGAACA+AGG 0.630710 4:+71478269 None:intergenic
GGAAATGGTAAGAGGTCCAG+AGG 0.631442 4:-71476129 MsG0480022351.01.T01:CDS
GATCCTATTGACGAACCAGA+TGG 0.633830 4:-71476542 MsG0480022351.01.T01:CDS
ATTGACGAACCAGATGGCCG+AGG 0.634066 4:-71476536 MsG0480022351.01.T01:CDS
GTTGTTGGGGTGAAGATGGG+AGG 0.635084 4:-71477867 MsG0480022351.01.T01:CDS
ATAAGAGTGAACTGAAGTGA+CGG 0.635680 4:+71476943 None:intergenic
GAACATGCTATTGAATTGGC+CGG 0.637602 4:+71478427 None:intergenic
ATCTAAAGTTGACATAAACT+CGG 0.638507 4:-71476219 MsG0480022351.01.T01:CDS
TTAGGGACAACAACACCAGA+AGG 0.641365 4:+71479563 None:intergenic
TGGTACACACGTAGTTGTTG+GGG 0.641806 4:-71477880 MsG0480022351.01.T01:CDS
AACTCGGCAATTTATCATGG+TGG 0.643726 4:-71476203 MsG0480022351.01.T01:CDS
ATCCACAGAAAACCTCTCGT+CGG 0.645918 4:+71477764 None:intergenic
ACAATAGTAGTTCAAACACA+AGG 0.647296 4:-71479598 MsG0480022351.01.T01:CDS
TTAAGCAATTAGCCGACGAG+AGG 0.648867 4:-71477776 MsG0480022351.01.T01:CDS
GCTGTGAGTGTGATTGGTCA+AGG 0.654752 4:-71479680 MsG0480022351.01.T01:CDS
GGCCTGCCAACAAGGGACGG+AGG 0.659617 4:+71477545 None:intergenic
GTAAGCATTTCTGTTCGAAG+GGG 0.662446 4:-71477360 MsG0480022351.01.T01:CDS
TATGCCAACCTTATAACCAG+TGG 0.666189 4:-71477326 MsG0480022351.01.T01:CDS
CTGATTAAAAGTGAGGACAT+CGG 0.670013 4:+71479490 None:intergenic
AAGTTCTAATGTCAATCCTG+CGG 0.679076 4:-71477733 MsG0480022351.01.T01:CDS
GATGATCATACAAAGCTTAG+GGG 0.687701 4:-71477584 MsG0480022351.01.T01:CDS
CTTACTCGGCAAGAGCAGCA+GGG 0.689201 4:+71478255 None:intergenic
GCTGAAGATGGATTGATAGG+TGG 0.699756 4:+71476615 None:intergenic
GTGACAACCCAATATCCTGG+TGG 0.702984 4:+71476104 None:intergenic
CAATAGTAGTTCAAACACAA+GGG 0.705935 4:-71479597 MsG0480022351.01.T01:CDS
AGAGGCAGATCACCATACAT+CGG 0.713318 4:+71477000 None:intergenic
GCAAAGTTATGTGTAGAAGG+TGG 0.744121 4:-71476077 MsG0480022351.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTATTTAAATTAGTTA+GGG - Chr4:71477015-71477034 MsG0480022351.01.T01:CDS 10.0%
!!! TTTTGTATTTAAATTAGTTA+GGG + Chr4:71477034-71477015 None:intergenic 10.0%
!! AAATAAAAAAAAATGACACA+TGG - Chr4:71476923-71476942 MsG0480022351.01.T01:CDS 15.0%
!! AGAAGAAAAAAATAAGTATT+GGG + Chr4:71478551-71478570 None:intergenic 15.0%
!! ATGAAACTATTGAATATAAT+TGG + Chr4:71476320-71476339 None:intergenic 15.0%
!! TCTATATACTATTCTTTATT+AGG + Chr4:71479869-71479888 None:intergenic 15.0%
!! TTTGTATTTAAATTAGTTAG+GGG - Chr4:71477016-71477035 MsG0480022351.01.T01:CDS 15.0%
!! TTTGTATTTAAATTAGTTAG+GGG + Chr4:71477035-71477016 None:intergenic 15.0%
!!! ATATGAAAATGGAAATTTTA+GGG - Chr4:71477139-71477158 MsG0480022351.01.T01:intron 15.0%
!!! GTTTTGTATTTAAATTAGTT+AGG - Chr4:71477014-71477033 MsG0480022351.01.T01:CDS 15.0%
!!! GTTTTGTATTTAAATTAGTT+AGG + Chr4:71477033-71477014 None:intergenic 15.0%
!!! TAATAACTATTTAAGAGTAT+TGG + Chr4:71478830-71478849 None:intergenic 15.0%
!!! TATTATAAGAATTTCTTTTC+AGG - Chr4:71478308-71478327 MsG0480022351.01.T01:CDS 15.0%
!! AAAAAAACATGTACCATAAA+TGG + Chr4:71477105-71477124 None:intergenic 20.0%
!! AAAAAACATGTACCATAAAT+GGG + Chr4:71477104-71477123 None:intergenic 20.0%
!! AAGAAATAAAGATCTAAGTA+AGG + Chr4:71477703-71477722 None:intergenic 20.0%
!! AATCTGAATTTCAGTTAAAT+TGG - Chr4:71477187-71477206 MsG0480022351.01.T01:intron 20.0%
!! ACATAAAAGTGATATGAAAA+TGG - Chr4:71477128-71477147 MsG0480022351.01.T01:intron 20.0%
!! AGAACATGAAGATAAAAATA+TGG - Chr4:71478032-71478051 MsG0480022351.01.T01:intron 20.0%
!! CAGAAGAAAAAAATAAGTAT+TGG + Chr4:71478552-71478571 None:intergenic 20.0%
!! CATAAATGGGAATTAAAAAA+TGG + Chr4:71477091-71477110 None:intergenic 20.0%
!! GTTAATAATACTAATAGCTA+TGG - Chr4:71475956-71475975 MsG0480022351.01.T01:three_prime_UTR 20.0%
!! TAAAAAAAAGGTAAATCAAC+AGG + Chr4:71476774-71476793 None:intergenic 20.0%
!! TAAAACTATAAGCATTCATT+TGG - Chr4:71477588-71477607 MsG0480022351.01.T01:intron 20.0%
!! TGAAGATAAAAATATGGAAA+TGG - Chr4:71478038-71478057 MsG0480022351.01.T01:intron 20.0%
!! TTATCAGACTTAATAGATAA+GGG + Chr4:71476163-71476182 None:intergenic 20.0%
!! TTATCTATTAAGTCTGATAA+AGG - Chr4:71476163-71476182 MsG0480022351.01.T01:CDS 20.0%
!! TTCTTTGTTGAAATATATGT+TGG - Chr4:71478580-71478599 MsG0480022351.01.T01:intron 20.0%
!! TTGCAACAAAAAATTTAAAG+TGG + Chr4:71476649-71476668 None:intergenic 20.0%
!! TTGTATTTAAATTAGTTAGG+GGG - Chr4:71477017-71477036 MsG0480022351.01.T01:CDS 20.0%
!! TTGTATTTAAATTAGTTAGG+GGG + Chr4:71477036-71477017 None:intergenic 20.0%
!! TTTATCAGACTTAATAGATA+AGG + Chr4:71476164-71476183 None:intergenic 20.0%
!!! AGTTTAAAACACTATTAACT+CGG + Chr4:71477761-71477780 None:intergenic 20.0%
!!! ATTATATGATTTTCTAGTTG+TGG - Chr4:71476495-71476514 MsG0480022351.01.T01:CDS 20.0%
!!! CAATACTTATTTTTTTCTTC+TGG - Chr4:71478550-71478569 MsG0480022351.01.T01:intron 20.0%
!!! CATTTTTTAATTCCCATTTA+TGG - Chr4:71477089-71477108 MsG0480022351.01.T01:intron 20.0%
!!! GATATGAAAATGGAAATTTT+AGG - Chr4:71477138-71477157 MsG0480022351.01.T01:intron 20.0%
!!! GTTGATTTACCTTTTTTTTA+AGG - Chr4:71476774-71476793 MsG0480022351.01.T01:intron 20.0%
!!! TATGAAAATGGAAATTTTAG+GGG - Chr4:71477140-71477159 MsG0480022351.01.T01:intron 20.0%
!!! TTTATGGTACATGTTTTTTT+TGG - Chr4:71477105-71477124 MsG0480022351.01.T01:intron 20.0%
!!! TTTTATTTTTTTTTGGCCTT+GGG + Chr4:71476911-71476930 None:intergenic 20.0%
!!! TTTTTATTTTTTTTTGGCCT+TGG + Chr4:71476912-71476931 None:intergenic 20.0%
! AAAAATGCTAACATCATTCT+TGG + Chr4:71478194-71478213 None:intergenic 25.0%
! AAAGACATTGATATGACATT+AGG + Chr4:71478417-71478436 None:intergenic 25.0%
! AAATTCTCCTATATGTTGAT+TGG - Chr4:71477734-71477753 MsG0480022351.01.T01:CDS 25.0%
! AATAGTCTTCAAAAGTCAAA+TGG + Chr4:71476742-71476761 None:intergenic 25.0%
! ACGGTATTAACATAAAGTTT+GGG + Chr4:71478783-71478802 None:intergenic 25.0%
! ACTATTGATAAAACACAGTT+AGG + Chr4:71476475-71476494 None:intergenic 25.0%
! ATATCTTTGATCATGTTTGT+AGG - Chr4:71478090-71478109 MsG0480022351.01.T01:intron 25.0%
! CAAAAGTCAAATGGTTAAAA+AGG + Chr4:71476733-71476752 None:intergenic 25.0%
! CTAAATAAACATGATTCTTC+AGG - Chr4:71477779-71477798 MsG0480022351.01.T01:CDS 25.0%
! CTATTGAATATAATTGGTCA+TGG + Chr4:71476314-71476333 None:intergenic 25.0%
! GAATTCAGTAATGAAGTAAT+AGG + Chr4:71478444-71478463 None:intergenic 25.0%
! GCAATTAAGCCTTAAAAAAA+AGG + Chr4:71476786-71476805 None:intergenic 25.0%
! GCATAACAATAATACTTACT+CGG + Chr4:71477458-71477477 None:intergenic 25.0%
! TAATAGATAAGGGAACATTA+GGG + Chr4:71476153-71476172 None:intergenic 25.0%
! TAATGTCATATCAATGTCTT+TGG - Chr4:71478416-71478435 MsG0480022351.01.T01:CDS 25.0%
! TAGTGATCAGAATTCAATTA+TGG + Chr4:71476622-71476641 None:intergenic 25.0%
! TATTCGACCATAAGTATAAA+AGG - Chr4:71478721-71478740 MsG0480022351.01.T01:intron 25.0%
! TGCCAAAGATTCAATAATTA+GGG - Chr4:71476987-71477006 MsG0480022351.01.T01:CDS 25.0%
! TTAATAGATAAGGGAACATT+AGG + Chr4:71476154-71476173 None:intergenic 25.0%
! TTCAATCAACTAGTTGAAAA+AGG + Chr4:71476366-71476385 None:intergenic 25.0%
! TTGAACTACTATTGTCAATA+TGG + Chr4:71476093-71476112 None:intergenic 25.0%
!! AAATGGCTTAATTGTACTTT+TGG + Chr4:71477074-71477093 None:intergenic 25.0%
!! ATAGAAAAGTTATTGACTAG+TGG - Chr4:71476409-71476428 MsG0480022351.01.T01:CDS 25.0%
!! ATCTAAAGTTGACATAAACT+CGG - Chr4:71479477-71479496 MsG0480022351.01.T01:intron 25.0%
!! GTATATTTTGTGATGTCATT+CGG - Chr4:71479785-71479804 MsG0480022351.01.T01:five_prime_UTR 25.0%
!! TCGACAAAATTAAGCATTTT+GGG + Chr4:71479541-71479560 None:intergenic 25.0%
!!! AAAAAATAAGTATTGGGCAA+AGG + Chr4:71478545-71478564 None:intergenic 25.0%
!!! AAAGTACTTTTCTTAAGACT+TGG - Chr4:71479319-71479338 MsG0480022351.01.T01:intron 25.0%
!!! AAATGGATTTTTAAGTCATG+CGG - Chr4:71478473-71478492 MsG0480022351.01.T01:CDS 25.0%
!!! TATTTAAGAGTATTGGAACT+TGG + Chr4:71478823-71478842 None:intergenic 25.0%
!!! TTTATTTTTTTTTGGCCTTG+GGG + Chr4:71476910-71476929 None:intergenic 25.0%
AACAGGTATTCGTTTATACT+TGG - Chr4:71479042-71479061 MsG0480022351.01.T01:intron 30.0%
AAGAAATTGAAGCAGAAGTA+AGG + Chr4:71476248-71476267 None:intergenic 30.0%
AAGAACACACGATTATTTGT+AGG - Chr4:71478947-71478966 MsG0480022351.01.T01:intron 30.0%
ACAATAGTAGTTCAAACACA+AGG - Chr4:71476098-71476117 MsG0480022351.01.T01:CDS 30.0%
ACAATGAATTTGCCATATTC+AGG + Chr4:71479821-71479840 None:intergenic 30.0%
ACTTGTATAGCAAGAATGTA+AGG - Chr4:71478865-71478884 MsG0480022351.01.T01:intron 30.0%
ACTTTATGTTAATACCGTGA+AGG - Chr4:71478785-71478804 MsG0480022351.01.T01:intron 30.0%
ATAAACTCGGCAATTTATCA+TGG - Chr4:71479490-71479509 MsG0480022351.01.T01:CDS 30.0%
CAATAGTAGTTCAAACACAA+GGG - Chr4:71476099-71476118 MsG0480022351.01.T01:CDS 30.0%
CACGGTATTAACATAAAGTT+TGG + Chr4:71478784-71478803 None:intergenic 30.0%
CTGCCAAAGATTCAATAATT+AGG - Chr4:71476986-71477005 MsG0480022351.01.T01:CDS 30.0%
CTTTCTTATCATTCTATGTG+TGG - Chr4:71475864-71475883 MsG0480022351.01.T01:three_prime_UTR 30.0%
GAATGATGTTTGTTTGCATT+TGG - Chr4:71476688-71476707 MsG0480022351.01.T01:intron 30.0%
GACTTAAAAATCCATTTCCT+GGG + Chr4:71478470-71478489 None:intergenic 30.0%
GCCAAAGATTCAATAATTAG+GGG - Chr4:71476988-71477007 MsG0480022351.01.T01:CDS 30.0%
GGCTATATCAGGAAAATTAA+AGG - Chr4:71477984-71478003 MsG0480022351.01.T01:intron 30.0%
TATAAACGAATACCTGTTAC+CGG + Chr4:71479040-71479059 None:intergenic 30.0%
TATGGTAATACTACGTACTA+CGG + Chr4:71476604-71476623 None:intergenic 30.0%
TCCCCTAATTATTGAATCTT+TGG + Chr4:71476992-71477011 None:intergenic 30.0%
TGACTTAAAAATCCATTTCC+TGG + Chr4:71478471-71478490 None:intergenic 30.0%
TGATGACTATTAACTAGAAG+AGG + Chr4:71477486-71477505 None:intergenic 30.0%
TGCCAAAGATTCAATACTTA+GGG + Chr4:71476878-71476897 None:intergenic 30.0%
TGTTCGACATGAAAAAATGT+TGG - Chr4:71477287-71477306 MsG0480022351.01.T01:CDS 30.0%
TTACATATTTGTGCTGAACA+TGG + Chr4:71476390-71476409 None:intergenic 30.0%
TTTGTATCTTAGATGTGAGT+AGG - Chr4:71478500-71478519 MsG0480022351.01.T01:intron 30.0%
! AAATCCTGATTTTCTAGATG+AGG + Chr4:71479401-71479420 None:intergenic 30.0%
! ACGCATTCCTTTTATACTTA+TGG + Chr4:71478731-71478750 None:intergenic 30.0%
! AGTTGATATATTGAGCAAGT+TGG - Chr4:71476442-71476461 MsG0480022351.01.T01:CDS 30.0%
! GTCGACAAAATTAAGCATTT+TGG + Chr4:71479542-71479561 None:intergenic 30.0%
! GTTGAATGTTACTGCTATTT+AGG + Chr4:71477645-71477664 None:intergenic 30.0%
! TATGTAAGTTGAACTCTTCA+CGG + Chr4:71475896-71475915 None:intergenic 30.0%
! TATTGAATCTTTGGCAGTTT+TGG - Chr4:71476882-71476901 MsG0480022351.01.T01:intron 30.0%
! TATTGAATCTTTGGCAGTTT+TGG + Chr4:71476901-71476882 None:intergenic 30.0%
! TCAACTTTAGATTGTTTCTC+AGG + Chr4:71479469-71479488 None:intergenic 30.0%
! TTAAGGCTTAATTGCACTTT+TGG - Chr4:71476791-71476810 MsG0480022351.01.T01:intron 30.0%
! TTCAGGTTCATTGAAAAGTA+TGG - Chr4:71477796-71477815 MsG0480022351.01.T01:CDS 30.0%
! TTGGAGTGACTTTTTACAAT+TGG + Chr4:71478175-71478194 None:intergenic 30.0%
!! ATAGCTGCAATATTTTTGTG+TGG - Chr4:71475913-71475932 MsG0480022351.01.T01:three_prime_UTR 30.0%
!! GTTTTAGCAATTATAGAGCA+AGG + Chr4:71477574-71477593 None:intergenic 30.0%
!! TGTGATCTTCTGAAATTTCT+AGG + Chr4:71479129-71479148 None:intergenic 30.0%
!! TTTCAATAAGCAGGTTGATT+CGG - Chr4:71479006-71479025 MsG0480022351.01.T01:intron 30.0%
!!! CATTGTGCTGATTTTGTTTT+TGG - Chr4:71479835-71479854 MsG0480022351.01.T01:five_prime_UTR 30.0%
!!! TTATTTTTTTTTGGCCTTGG+GGG + Chr4:71476909-71476928 None:intergenic 30.0%
AACAGACAACTATCTTTGTC+GGG - Chr4:71477235-71477254 MsG0480022351.01.T01:CDS 35.0%
ACAATACAATAGCTCCAGAA+TGG - Chr4:71479237-71479256 MsG0480022351.01.T01:intron 35.0%
ACATGAAAAAATGTTGGTCC+AGG - Chr4:71477293-71477312 MsG0480022351.01.T01:CDS 35.0%
ACTAATAGCTATGGAAATGC+AGG - Chr4:71475965-71475984 MsG0480022351.01.T01:three_prime_UTR 35.0%
AGGATGATCATACAAAGCTT+AGG - Chr4:71478110-71478129 MsG0480022351.01.T01:intron 35.0%
AGTAAGCATTTCTGTTCGAA+GGG - Chr4:71478335-71478354 MsG0480022351.01.T01:CDS 35.0%
ATAAGAGTGAACTGAAGTGA+CGG + Chr4:71478756-71478775 None:intergenic 35.0%
ATCAACCTGCTTATTGAAAC+AGG + Chr4:71479005-71479024 None:intergenic 35.0%
CAACAGACAACTATCTTTGT+CGG - Chr4:71477234-71477253 MsG0480022351.01.T01:CDS 35.0%
CAATGACCTGATTAAAAGTG+AGG + Chr4:71476216-71476235 None:intergenic 35.0%
CATGAAAAAATGTTGGTCCA+GGG - Chr4:71477294-71477313 MsG0480022351.01.T01:CDS 35.0%
CCAAAGATTCAATACTTAGG+GGG + Chr4:71476876-71476895 None:intergenic 35.0%
CTAATAGCTATGGAAATGCA+GGG - Chr4:71475966-71475985 MsG0480022351.01.T01:three_prime_UTR 35.0%
CTGATTAAAAGTGAGGACAT+CGG + Chr4:71476209-71476228 None:intergenic 35.0%
CTGCCAAAGATTCAATACTT+AGG + Chr4:71476879-71476898 None:intergenic 35.0%
CTTAAGACTTGGATACTCAA+CGG - Chr4:71479330-71479349 MsG0480022351.01.T01:intron 35.0%
GAAAATTCGCAGATCAGAAT+GGG - Chr4:71479363-71479382 MsG0480022351.01.T01:intron 35.0%
GATGATCATACAAAGCTTAG+GGG - Chr4:71478112-71478131 MsG0480022351.01.T01:intron 35.0%
GATTCATTAGATACGAATCG+TGG - Chr4:71476549-71476568 MsG0480022351.01.T01:CDS 35.0%
GCCAAAGATTCAATACTTAG+GGG + Chr4:71476877-71476896 None:intergenic 35.0%
GGATGATCATACAAAGCTTA+GGG - Chr4:71478111-71478130 MsG0480022351.01.T01:intron 35.0%
GGTATTCGTTTATACTTGGA+AGG - Chr4:71479046-71479065 MsG0480022351.01.T01:intron 35.0%
GTCTACATCTATTGTGACAA+AGG - Chr4:71479264-71479283 MsG0480022351.01.T01:intron 35.0%
TACTTATGGTCGAATACAAG+AGG + Chr4:71478717-71478736 None:intergenic 35.0%
TAGTAAGCATTTCTGTTCGA+AGG - Chr4:71478334-71478353 MsG0480022351.01.T01:CDS 35.0%
TCAACCTCATCTAGAAAATC+AGG - Chr4:71479394-71479413 MsG0480022351.01.T01:intron 35.0%
TCAACCTGCTTATTGAAACA+GGG + Chr4:71479004-71479023 None:intergenic 35.0%
TCACTTCAGTTCACTCTTAT+GGG - Chr4:71478756-71478775 MsG0480022351.01.T01:intron 35.0%
TGAATTTGCCATATTCAGGT+CGG + Chr4:71479817-71479836 None:intergenic 35.0%
TGATGAAGTTCTTCTATTGC+AGG + Chr4:71478642-71478661 None:intergenic 35.0%
TGTCGAACATGCTATTGAAT+TGG + Chr4:71477276-71477295 None:intergenic 35.0%
TGTTATGAACCATCCATCAA+AGG + Chr4:71477344-71477363 None:intergenic 35.0%
TTGTAGGAATTAGTTAGCAC+TGG - Chr4:71478963-71478982 MsG0480022351.01.T01:intron 35.0%
! AAGTTCTAATGTCAATCCTG+CGG - Chr4:71477963-71477982 MsG0480022351.01.T01:intron 35.0%
! ATGTAAGTTGAACTCTTCAC+GGG + Chr4:71475895-71475914 None:intergenic 35.0%
! GATTTTCTAGATGAGGTTGA+AGG + Chr4:71479394-71479413 None:intergenic 35.0%
! GCTTAATTTTGTCGACACAA+AGG - Chr4:71479546-71479565 MsG0480022351.01.T01:CDS 35.0%
! TGGTTTGAGGTTAAGCTAAT+GGG - Chr4:71479289-71479308 MsG0480022351.01.T01:intron 35.0%
! TTGGTTTGAGGTTAAGCTAA+TGG - Chr4:71479288-71479307 MsG0480022351.01.T01:intron 35.0%
! TTTTGTCGACACAAAGGAAA+TGG - Chr4:71479552-71479571 MsG0480022351.01.T01:CDS 35.0%
! TTTTGTGTGGCTTGAGTAAT+GGG - Chr4:71475926-71475945 MsG0480022351.01.T01:three_prime_UTR 35.0%
! TTTTTGTGTGGCTTGAGTAA+TGG - Chr4:71475925-71475944 MsG0480022351.01.T01:three_prime_UTR 35.0%
!! AATGGAAATTTTAGGGGTGA+TGG - Chr4:71477146-71477165 MsG0480022351.01.T01:intron 35.0%
!! ATGGAAATTTTAGGGGTGAT+GGG - Chr4:71477147-71477166 MsG0480022351.01.T01:intron 35.0%
!! TTCAATAAGCAGGTTGATTC+GGG - Chr4:71479007-71479026 MsG0480022351.01.T01:intron 35.0%
!!! TATTTTTTTTTGGCCTTGGG+GGG + Chr4:71476908-71476927 None:intergenic 35.0%
AAAAAGACGTACCTTGTTCG+TGG - Chr4:71477416-71477435 MsG0480022351.01.T01:intron 40.0%
AACTCGGCAATTTATCATGG+TGG - Chr4:71479493-71479512 MsG0480022351.01.T01:CDS 40.0%
AAGTTCGACTGTTCGAGTAT+AGG + Chr4:71478289-71478308 None:intergenic 40.0%
ACTCGGTCCAATCAACATAT+AGG + Chr4:71477744-71477763 None:intergenic 40.0%
AGAATAGATGCAAAGTGCAC+AGG + Chr4:71478258-71478277 None:intergenic 40.0%
AGATGTAGACTCATCCATTC+TGG + Chr4:71479254-71479273 None:intergenic 40.0%
AGCAATTTCTGCAGTTCAGT+CGG + Chr4:71477901-71477920 None:intergenic 40.0%
ATGGTACACACGTAGTTGTT+GGG - Chr4:71477815-71477834 MsG0480022351.01.T01:CDS 40.0%
CAACACCAGAAGGAAAAACA+AGG + Chr4:71476126-71476145 None:intergenic 40.0%
CATCTATTGTGACAAAGGCT+TGG - Chr4:71479269-71479288 MsG0480022351.01.T01:intron 40.0%
CCCTATCTTTCCAAAACTTG+CGG - Chr4:71476816-71476835 MsG0480022351.01.T01:intron 40.0%
CCCTATCTTTCCAATACTTG+CGG + Chr4:71477049-71477068 None:intergenic 40.0%
CGAAAATTCGCAGATCAGAA+TGG - Chr4:71479362-71479381 MsG0480022351.01.T01:intron 40.0%
CTGATAAAGGTGATTGTACC+AGG - Chr4:71476176-71476195 MsG0480022351.01.T01:CDS 40.0%
CTGGAGCTATTGTATTGTAC+AGG + Chr4:71479235-71479254 None:intergenic 40.0%
GAACATGCTATTGAATTGGC+CGG + Chr4:71477272-71477291 None:intergenic 40.0%
GACACAAAGGAAATGGTAAG+AGG - Chr4:71479559-71479578 MsG0480022351.01.T01:CDS 40.0%
GACATTAGGAGACTGTGATA+TGG + Chr4:71478403-71478422 None:intergenic 40.0%
GCAAAGTTATGTGTAGAAGG+TGG - Chr4:71479619-71479638 MsG0480022351.01.T01:CDS 40.0%
GGAAGAAGGAATTACCTTCA+CGG + Chr4:71478802-71478821 None:intergenic 40.0%
GGTGCAAAGTTATGTGTAGA+AGG - Chr4:71479616-71479635 MsG0480022351.01.T01:CDS 40.0%
GTAAGCATTTCTGTTCGAAG+GGG - Chr4:71478336-71478355 MsG0480022351.01.T01:CDS 40.0%
GTCACTTCAGTTCACTCTTA+TGG - Chr4:71478755-71478774 MsG0480022351.01.T01:intron 40.0%
TATGCCAACCTTATAACCAG+TGG - Chr4:71478370-71478389 MsG0480022351.01.T01:CDS 40.0%
TATGGTACACACGTAGTTGT+TGG - Chr4:71477814-71477833 MsG0480022351.01.T01:CDS 40.0%
TCATTACTGAATTCTGTCCC+AGG - Chr4:71478450-71478469 MsG0480022351.01.T01:CDS 40.0%
! AATTTTCCTGATATAGCCGC+AGG + Chr4:71477982-71478001 None:intergenic 40.0%
! AGTTATTGACTAGTGGCAGA+TGG - Chr4:71476416-71476435 MsG0480022351.01.T01:CDS 40.0%
!! ACCGCAAGTATTGGAAAGAT+AGG - Chr4:71477045-71477064 MsG0480022351.01.T01:CDS 40.0%
!! CCCCCTAAGTATTGAATCTT+TGG - Chr4:71476873-71476892 MsG0480022351.01.T01:intron 40.0%
!! CCGCAAGTATTGGAAAGATA+GGG - Chr4:71477046-71477065 MsG0480022351.01.T01:CDS 40.0%
!! CGATGTCCTCACTTTTAATC+AGG - Chr4:71476207-71476226 MsG0480022351.01.T01:CDS 40.0%
!! CGCAAGTATTGGAAAGATAG+GGG - Chr4:71477047-71477066 MsG0480022351.01.T01:CDS 40.0%
!! GAGTATTGGAACTTGGAAGA+AGG + Chr4:71478816-71478835 None:intergenic 40.0%
!! GATGCTGAAGATGGATTGAT+AGG + Chr4:71479087-71479106 None:intergenic 40.0%
!! GCAAGTATTGGAAAGATAGG+GGG - Chr4:71477048-71477067 MsG0480022351.01.T01:CDS 40.0%
!! TCTGAAATTTCTAGGACACC+TGG + Chr4:71479121-71479140 None:intergenic 40.0%
!!! ACCGCAAGTTTTGGAAAGAT+AGG + Chr4:71476820-71476839 None:intergenic 40.0%
!!! CCGCAAGTTTTGGAAAGATA+GGG + Chr4:71476819-71476838 None:intergenic 40.0%
!!! CGCAAGTTTTGGAAAGATAG+GGG + Chr4:71476818-71476837 None:intergenic 40.0%
!!! GCAAGTTTTGGAAAGATAGG+GGG + Chr4:71476817-71476836 None:intergenic 40.0%
AACATCATTCACCCTGTGCA+AGG + Chr4:71476678-71476697 None:intergenic 45.0%
AATTTCTGCAGTTCAGTCGG+CGG + Chr4:71477898-71477917 None:intergenic 45.0%
ACTAAGAGCCTTGCCTTTGA+TGG - Chr4:71477328-71477347 MsG0480022351.01.T01:CDS 45.0%
AGAGGATCCACCAGGATATT+GGG - Chr4:71479585-71479604 MsG0480022351.01.T01:CDS 45.0%
AGAGGCAGATCACCATACAT+CGG + Chr4:71478699-71478718 None:intergenic 45.0%
AGGTGGCAGAATCTCAATCA+AGG - Chr4:71479636-71479655 MsG0480022351.01.T01:CDS 45.0%
AGTTTCAGTTGCCACGACAA+TGG - Chr4:71478670-71478689 MsG0480022351.01.T01:intron 45.0%
ATCAAAGGCAAGGCTCTTAG+TGG + Chr4:71477329-71477348 None:intergenic 45.0%
ATCCACAGAAAACCTCTCGT+CGG + Chr4:71477935-71477954 None:intergenic 45.0%
ATGAGTGCAAAGCTTAGCCA+AGG - Chr4:71479433-71479452 MsG0480022351.01.T01:intron 45.0%
ATGCTATTGAATTGGCCGGA+TGG + Chr4:71477268-71477287 None:intergenic 45.0%
ATTCGCAGATCAGAATGGGA+TGG - Chr4:71479367-71479386 MsG0480022351.01.T01:intron 45.0%
CAAAGGAAAACCAAAGTCGC+AGG + Chr4:71478528-71478547 None:intergenic 45.0%
CCATCTTCAGCATCTTTCAG+AGG - Chr4:71479093-71479112 MsG0480022351.01.T01:intron 45.0%
CTACGTACTACGGTACTAGA+TGG + Chr4:71476594-71476613 None:intergenic 45.0%
CTGAATTCTGTCCCAGGAAA+TGG - Chr4:71478456-71478475 MsG0480022351.01.T01:CDS 45.0%
GAAAACATGCTCCACTTCAC+TGG + Chr4:71479196-71479215 None:intergenic 45.0%
GACACATGGCACCTCATTTA+GGG - Chr4:71476937-71476956 MsG0480022351.01.T01:CDS 45.0%
GAGAAAGCTGTGAGTGTGAT+TGG - Chr4:71476010-71476029 MsG0480022351.01.T01:exon 45.0%
GATCCTATTGACGAACCAGA+TGG - Chr4:71479154-71479173 MsG0480022351.01.T01:intron 45.0%
GATTCTCTGCTTGCAAGTCA+AGG - Chr4:71476062-71476081 MsG0480022351.01.T01:CDS 45.0%
GCTTTCTCAGCTGCTAATTG+AGG + Chr4:71475998-71476017 None:intergenic 45.0%
GTAGTTGTTGGGGTGAAGAT+GGG - Chr4:71477826-71477845 MsG0480022351.01.T01:CDS 45.0%
GTTTCAGTTGCCACGACAAT+GGG - Chr4:71478671-71478690 MsG0480022351.01.T01:intron 45.0%
TAGCTATGGAAATGCAGGGT+TGG - Chr4:71475970-71475989 MsG0480022351.01.T01:three_prime_UTR 45.0%
TCGACCCTGTTTCAATAAGC+AGG - Chr4:71478997-71479016 MsG0480022351.01.T01:intron 45.0%
TCTCAGGTGAATGCAATCCT+TGG + Chr4:71479453-71479472 None:intergenic 45.0%
TGAACCATCCATCAAAGGCA+AGG + Chr4:71477339-71477358 None:intergenic 45.0%
TGACACATGGCACCTCATTT+AGG - Chr4:71476936-71476955 MsG0480022351.01.T01:CDS 45.0%
TGCAATTCTTGCCTTGCACA+GGG - Chr4:71476664-71476683 MsG0480022351.01.T01:CDS 45.0%
TGGTACACACGTAGTTGTTG+GGG - Chr4:71477816-71477835 MsG0480022351.01.T01:CDS 45.0%
TTAAGCAATTAGCCGACGAG+AGG - Chr4:71477920-71477939 MsG0480022351.01.T01:intron 45.0%
TTAGGGACAACAACACCAGA+AGG + Chr4:71476136-71476155 None:intergenic 45.0%
TTGCAATTCTTGCCTTGCAC+AGG - Chr4:71476663-71476682 MsG0480022351.01.T01:CDS 45.0%
TTGTCGGGAAAGATTCCATC+CGG - Chr4:71477250-71477269 MsG0480022351.01.T01:CDS 45.0%
! AGAGCCACTGGTTATAAGGT+TGG + Chr4:71478377-71478396 None:intergenic 45.0%
! CCTCTGAAAGATGCTGAAGA+TGG + Chr4:71479096-71479115 None:intergenic 45.0%
! GTTGAGAGCCACTGGTTATA+AGG + Chr4:71478381-71478400 None:intergenic 45.0%
! TACAATTGGCCTGCCAACAA+GGG + Chr4:71478161-71478180 None:intergenic 45.0%
! TGTGACAAAGGCTTGGTTTG+AGG - Chr4:71479276-71479295 MsG0480022351.01.T01:intron 45.0%
! TTACAATTGGCCTGCCAACA+AGG + Chr4:71478162-71478181 None:intergenic 45.0%
!! GCTGAAGATGGATTGATAGG+TGG + Chr4:71479084-71479103 None:intergenic 45.0%
!!! AGGGACCTTGTTTTTCCTTC+TGG - Chr4:71476118-71476137 MsG0480022351.01.T01:CDS 45.0%
!!! ATTTTAGGGGTGATGGGATG+TGG - Chr4:71477153-71477172 MsG0480022351.01.T01:intron 45.0%
!!! CATTTTTTTTTATTTTTTTT+TGG + Chr4:71476918-71476937 None:intergenic 5.0%
AACAAACCTCCGTCCCTTGT+TGG - Chr4:71478145-71478164 MsG0480022351.01.T01:intron 50.0%
AACGAATACCTGTTACCGGC+CGG + Chr4:71479036-71479055 None:intergenic 50.0%
AGAGCCTTGCCTTTGATGGA+TGG - Chr4:71477332-71477351 MsG0480022351.01.T01:CDS 50.0%
AGCATTTCTGTTCGAAGGGG+AGG - Chr4:71478339-71478358 MsG0480022351.01.T01:CDS 50.0%
CAGAGGATCCACCAGGATAT+TGG - Chr4:71479584-71479603 MsG0480022351.01.T01:CDS 50.0%
CAGCATCTTTCAGAGGTTCC+AGG - Chr4:71479100-71479119 MsG0480022351.01.T01:intron 50.0%
CCAGTGACAACCCAATATCC+TGG + Chr4:71479598-71479617 None:intergenic 50.0%
CGTAGTTGTTGGGGTGAAGA+TGG - Chr4:71477825-71477844 MsG0480022351.01.T01:CDS 50.0%
CTGATGTGGCACCCTAAATG+AGG + Chr4:71476951-71476970 None:intergenic 50.0%
GCTACTACGAACCAGTGAAG+TGG - Chr4:71479182-71479201 MsG0480022351.01.T01:intron 50.0%
GGAAATGGTAAGAGGTCCAG+AGG - Chr4:71479567-71479586 MsG0480022351.01.T01:CDS 50.0%
GGCGTAAACCGACCTGAATA+TGG - Chr4:71479806-71479825 MsG0480022351.01.T01:five_prime_UTR 50.0%
GTCAATCCTGCGGCTATATC+AGG - Chr4:71477973-71477992 MsG0480022351.01.T01:intron 50.0%
GTGACAACCCAATATCCTGG+TGG + Chr4:71479595-71479614 None:intergenic 50.0%
GTGATATGGTTGAGAGCCAC+TGG + Chr4:71478389-71478408 None:intergenic 50.0%
! CAATATCCTGGTGGATCCTC+TGG + Chr4:71479586-71479605 None:intergenic 50.0%
! CCAGGATATTGGGTTGTCAC+TGG - Chr4:71479595-71479614 MsG0480022351.01.T01:CDS 50.0%
! GCTGTGAGTGTGATTGGTCA+AGG - Chr4:71476016-71476035 MsG0480022351.01.T01:CDS 50.0%
!! AGCAGGTTGATTCGGGAAAC+CGG - Chr4:71479014-71479033 MsG0480022351.01.T01:intron 50.0%
!! AGCATTTTGGGAGCCCTTCT+TGG + Chr4:71479529-71479548 None:intergenic 50.0%
!! TCACTGGTTCGTAGTAGCCT+CGG + Chr4:71479180-71479199 None:intergenic 50.0%
ACTTACTCGGCAAGAGCAGC+AGG + Chr4:71477445-71477464 None:intergenic 55.0%
ATTGACGAACCAGATGGCCG+AGG - Chr4:71479160-71479179 MsG0480022351.01.T01:intron 55.0%
CAAAGCTTAGGGGACTGCAC+AGG - Chr4:71478122-71478141 MsG0480022351.01.T01:intron 55.0%
CTTACTCGGCAAGAGCAGCA+GGG + Chr4:71477444-71477463 None:intergenic 55.0%
CTTAGTGGAAGCTGCATCCC+TGG + Chr4:71477314-71477333 None:intergenic 55.0%
GAGGACATCGGATCGAAACC+TGG + Chr4:71476197-71476216 None:intergenic 55.0%
GGGGCTGTAACCGCAAGTAT+TGG - Chr4:71477036-71477055 MsG0480022351.01.T01:CDS 55.0%
GTTGTTGGGGTGAAGATGGG+AGG - Chr4:71477829-71477848 MsG0480022351.01.T01:CDS 55.0%
TGAGTAGGCACCTGCGACTT+TGG - Chr4:71478515-71478534 MsG0480022351.01.T01:intron 55.0%
TGGTCCACCTGTGCCAAGAA+GGG - Chr4:71479513-71479532 MsG0480022351.01.T01:CDS 55.0%
! AGCCGACGAGAGGTTTTCTG+TGG - Chr4:71477930-71477949 MsG0480022351.01.T01:intron 55.0%
! ATTGGCCTGCCAACAAGGGA+CGG + Chr4:71478157-71478176 None:intergenic 55.0%
! CGGCCATCTGGTTCGTCAAT+AGG + Chr4:71479160-71479179 None:intergenic 55.0%
! GGGGCTGTAACCGCAAGTTT+TGG + Chr4:71476829-71476848 None:intergenic 55.0%
! TACATCGGTGCCCATTGTCG+TGG + Chr4:71478684-71478703 None:intergenic 55.0%
! TAGGGTGCCACATCAGCGTT+GGG - Chr4:71476955-71476974 MsG0480022351.01.T01:CDS 55.0%
! TTAGGGTGCCACATCAGCGT+TGG - Chr4:71476954-71476973 MsG0480022351.01.T01:CDS 55.0%
!! CGACAATGGGCACCGATGTA+TGG - Chr4:71478684-71478703 MsG0480022351.01.T01:intron 55.0%
AACCTCCGTCCCTTGTTGGC+AGG - Chr4:71478149-71478168 MsG0480022351.01.T01:intron 60.0%
AGAGGTCCAGAGGATCCACC+AGG - Chr4:71479577-71479596 MsG0480022351.01.T01:CDS 60.0%
GCAGCAGGGTTCCACGAACA+AGG + Chr4:71477430-71477449 None:intergenic 60.0%
GTGGTCCACCTGTGCCAAGA+AGG - Chr4:71479512-71479531 MsG0480022351.01.T01:CDS 60.0%
TCGTAGTAGCCTCGGCCATC+TGG + Chr4:71479172-71479191 None:intergenic 60.0%
TTGGGAGCCCTTCTTGGCAC+AGG + Chr4:71479523-71479542 None:intergenic 60.0%
TTTGGCCCCCAACGCTGATG+TGG + Chr4:71476965-71476984 None:intergenic 60.0%
! AGGGTGCCACATCAGCGTTG+GGG - Chr4:71476956-71476975 MsG0480022351.01.T01:CDS 60.0%
!! GGTTGATTCGGGAAACCGGC+CGG - Chr4:71479018-71479037 MsG0480022351.01.T01:intron 60.0%
!! TTGGCAGTTTTGGCCCCCCA+AGG - Chr4:71476892-71476911 MsG0480022351.01.T01:intron 60.0%
GGAGCCCTTCTTGGCACAGG+TGG + Chr4:71479520-71479539 None:intergenic 65.0%
TCGGGAAACCGGCCGGTAAC+AGG - Chr4:71479025-71479044 MsG0480022351.01.T01:intron 65.0%
! GGGTGCCACATCAGCGTTGG+GGG - Chr4:71476957-71476976 MsG0480022351.01.T01:CDS 65.0%
GGCCTGCCAACAAGGGACGG+AGG + Chr4:71478154-71478173 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 71475824 71479894 71475824 ID=MsG0480022351.01;Name=MsG0480022351.01
Chr4 mRNA 71475824 71479894 71475824 ID=MsG0480022351.01.T01;Parent=MsG0480022351.01;Name=MsG0480022351.01.T01;_AED=0.48;_eAED=0.48;_QI=120|1|1|1|1|1|7|189|620
Chr4 exon 71475824 71476699 71475824 ID=MsG0480022351.01.T01:exon:2492;Parent=MsG0480022351.01.T01
Chr4 exon 71476912 71477084 71476912 ID=MsG0480022351.01.T01:exon:2491;Parent=MsG0480022351.01.T01
Chr4 exon 71477205 71477388 71477205 ID=MsG0480022351.01.T01:exon:2490;Parent=MsG0480022351.01.T01
Chr4 exon 71477517 71477606 71477517 ID=MsG0480022351.01.T01:exon:2489;Parent=MsG0480022351.01.T01
Chr4 exon 71477713 71477917 71477713 ID=MsG0480022351.01.T01:exon:2488;Parent=MsG0480022351.01.T01
Chr4 exon 71478260 71478498 71478260 ID=MsG0480022351.01.T01:exon:2487;Parent=MsG0480022351.01.T01
Chr4 exon 71479490 71479894 71479490 ID=MsG0480022351.01.T01:exon:2486;Parent=MsG0480022351.01.T01
Chr4 five_prime_UTR 71479775 71479894 71479775 ID=MsG0480022351.01.T01:five_prime_utr;Parent=MsG0480022351.01.T01
Chr4 CDS 71479490 71479774 71479490 ID=MsG0480022351.01.T01:cds;Parent=MsG0480022351.01.T01
Chr4 CDS 71478260 71478498 71478260 ID=MsG0480022351.01.T01:cds;Parent=MsG0480022351.01.T01
Chr4 CDS 71477713 71477917 71477713 ID=MsG0480022351.01.T01:cds;Parent=MsG0480022351.01.T01
Chr4 CDS 71477517 71477606 71477517 ID=MsG0480022351.01.T01:cds;Parent=MsG0480022351.01.T01
Chr4 CDS 71477205 71477388 71477205 ID=MsG0480022351.01.T01:cds;Parent=MsG0480022351.01.T01
Chr4 CDS 71476912 71477084 71476912 ID=MsG0480022351.01.T01:cds;Parent=MsG0480022351.01.T01
Chr4 CDS 71476013 71476699 71476013 ID=MsG0480022351.01.T01:cds;Parent=MsG0480022351.01.T01
Chr4 three_prime_UTR 71475824 71476012 71475824 ID=MsG0480022351.01.T01:three_prime_utr;Parent=MsG0480022351.01.T01
Gene Sequence

>MsG0480022351.01.T01

ATGGGTTTCAATGTTAATAATACTAATAGCTATGGAAATGCAGGGTTGGATCCTCAATTAGCAGCTGAGAAAGCTGTGAGTGTGATTGGTCAAGGATATAATTTATGCAATGATATAAGATTCTCTGCTTGCAAGTCAAGGTTGATCCATATTGACAATAGTAGTTCAAACACAAGGGACCTTGTTTTTCCTTCTGGTGTTGTTGTCCCTAATGTTCCCTTATCTATTAAGTCTGATAAAGGTGATTGTACCAGGTTTCGATCCGATGTCCTCACTTTTAATCAGATGTCTGAGCATTTCAACAGACAACTATCTTTGTCGGGAAAGATTCCATCCGGCCAATTCAATAGCATGTTCGACATGAAAAAATGTTGGTCCAGGGATGCAGCTTCCACTAAGAGCCTTGCCTTTGATGGATGGTTCATAACATTGTATAGCGTTGAATTAGATAGAACTAACATTACTCTTTCTGAAACTGTGAAAAAAGACGTACCTTGTTCGTGGAACCCTGCTGCTCTTGCCGAGTTCATTGAAAAGTATGGTACACACGTAGTTGTTGGGGTGAAGATGGGAGGTAAAGATGTTGTTCATATCAAGCAGTCAAAAAATTCAGATACTCCGCCGACTGAACTGCAGAAATTGCTTAAGCAATTAGCCGACGAGAGGTTTTCTGTGGATTCAAATCAAAGTTCTAATGTCAATCCTGCGGCTATATCAGGAAAATTAAAGGATGATCATACAAAGCTTAGGGGACTGCACAGGAACAAACCTCCGTCCCTTGTTGGCAGGCCAATTGTAAAAAGTCACTCCAAGAATGATGATATAGTAAGCATTTCTGTTCGAAGGGGAGGTATTGATGTATGCCAACCTTATAACCAGTGGCTCTCAACCATATCACAGTCTCCTAATGTCATATCAATGTCTTTGGTGCCTATTACTTCATTACTGAATTCTGTCCCAGGAAATGGATTTTTAAGTCATGCGGTGAATTTGTATCTTAGATATAAACCTGCAATAGAAGAACTTCATCAATTTCTAGAGTTTCAGTTGCCACGACAATGGGCACCGATGTATGGTGATCTGCCTCTTGTATTCGACCATAAGTATAAAAGGAATGCGTCTCCGTCACTTCAGTTCACTCTTATGGGACCCAAACTTTATGTTAATACCGTGAAGGTTGATTCGGGAAACCGGCCGGTAACAGGTATTCGTTTATACTTGGAAGGCAAGAAAAATAACCACCTATCAATCCATCTTCAGCATCTTTCAGAGGTTCCAGGTGTCCTAGAAATTTCAGAAGATCACAGTTATGATCCTATTGACGAACCAGATGGCCGAGGCTACTACGAACCAGTGAAGTGGAGCATGTTTTCTCATGTTTACACAGCACCTGTACAATACAATAGCTCCAGAATGGATGAGTCTACATCTATTGTGACAAAGGCTTGGTTTGAGGTTAAGCTAATGGGAATGAAGAAAGTACTTTTCTTAAGACTTGGATACTCAACGGTAGCATCAGCGAAAATTCGCAGATCAGAATGGGATGGACCTTCAACCTCATCTAGAAAATCAGGATTTTTTTCAGCATTGATGAGTGCAAAGCTTAGCCAAGGATTGCATTCACCTGAGAAACAATCTAAAGTTGACATAAACTCGGCAATTTATCATGGTGGTCCACCTGTGCCAAGAAGGGCTCCCAAAATGCTTAATTTTGTCGACACAAAGGAAATGGTAAGAGGTCCAGAGGATCCACCAGGATATTGGGTTGTCACTGGTGCAAAGTTATGTGTAGAAGGTGGCAGAATCTCAATCAAGGCAAAATATTCTTTGTTGACTATATTATCAGAAGAATCTATTATGTAG
Protein sequence

>MsG0480022351.01.T01

MGFNVNNTNSYGNAGLDPQLAAEKAVSVIGQGYNLCNDIRFSACKSRLIHIDNSSSNTRDLVFPSGVVVPNVPLSIKSDKGDCTRFRSDVLTFNQMSEHFNRQLSLSGKIPSGQFNSMFDMKKCWSRDAASTKSLAFDGWFITLYSVELDRTNITLSETVKKDVPCSWNPAALAEFIEKYGTHVVVGVKMGGKDVVHIKQSKNSDTPPTELQKLLKQLADERFSVDSNQSSNVNPAAISGKLKDDHTKLRGLHRNKPPSLVGRPIVKSHSKNDDIVSISVRRGGIDVCQPYNQWLSTISQSPNVISMSLVPITSLLNSVPGNGFLSHAVNLYLRYKPAIEELHQFLEFQLPRQWAPMYGDLPLVFDHKYKRNASPSLQFTLMGPKLYVNTVKVDSGNRPVTGIRLYLEGKKNNHLSIHLQHLSEVPGVLEISEDHSYDPIDEPDGRGYYEPVKWSMFSHVYTAPVQYNSSRMDESTSIVTKAWFEVKLMGMKKVLFLRLGYSTVASAKIRRSEWDGPSTSSRKSGFFSALMSAKLSQGLHSPEKQSKVDINSAIYHGGPPVPRRAPKMLNFVDTKEMVRGPEDPPGYWVVTGAKLCVEGGRISIKAKYSLLTILSEESIM*