AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022389.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022389.01.T01 MTR_4g088835 93.435 914 43 3 1 897 1 914 0.0 1727
MsG0480022389.01.T01 MTR_2g013650 67.181 908 261 10 22 897 22 924 0.0 1185
MsG0480022389.01.T01 MTR_4g020620 63.127 857 244 11 19 850 15 824 0.0 1035
MsG0480022389.01.T01 MTR_4g020620 62.435 772 228 10 74 820 2 736 0.0 919
MsG0480022389.01.T01 MTR_4g020620 57.096 606 209 8 74 663 2 572 0.0 640
MsG0480022389.01.T01 MTR_1g112730 35.964 659 351 14 294 897 461 1103 9.79e-119 388
MsG0480022389.01.T01 MTR_1g112730 44.286 210 115 2 42 250 125 333 1.52e-43 171
MsG0480022389.01.T01 MTR_1g092460 52.416 269 109 5 637 887 147 414 3.29e-86 282
MsG0480022389.01.T01 MTR_0274s0030 51.673 269 111 6 637 887 84 351 2.67e-83 272
MsG0480022389.01.T01 MTR_2g079270 50.362 276 117 6 637 893 277 551 5.23e-80 272
MsG0480022389.01.T01 MTR_1g092440 56.542 214 88 2 671 879 397 610 3.45e-75 258
MsG0480022389.01.T01 MTR_7g023760 48.864 264 103 7 637 882 61 310 1.68e-74 247
MsG0480022389.01.T01 MTR_8g060700 51.481 270 108 5 637 886 472 738 6.77e-74 258
MsG0480022389.01.T01 MTR_1g092465 56.354 181 78 1 673 852 254 434 1.42e-67 233
MsG0480022389.01.T01 MTR_0332s0040 53.266 199 93 0 653 851 155 353 2.57e-67 231
MsG0480022389.01.T01 MTR_7g047570 57.865 178 74 1 670 847 53 229 1.61e-64 220
MsG0480022389.01.T01 MTR_7g451770 57.865 178 74 1 670 847 53 229 1.61e-64 220
MsG0480022389.01.T01 MTR_4g086440 56.180 178 77 1 670 847 52 228 7.33e-63 215
MsG0480022389.01.T01 MTR_7g451800 52.604 192 89 2 670 861 53 242 5.69e-62 213
MsG0480022389.01.T01 MTR_7g047620 52.604 192 89 2 670 861 53 242 5.69e-62 213
MsG0480022389.01.T01 MTR_8g060700 55.779 199 70 3 637 820 472 667 1.39e-59 216
MsG0480022389.01.T01 MTR_8g060700 55.500 200 71 3 636 820 471 667 1.97e-59 216
MsG0480022389.01.T01 MTR_2g018540 47.479 238 113 6 657 886 112 345 1.27e-56 199
MsG0480022389.01.T01 MTR_1g092490 49.239 197 94 3 702 892 58 254 3.12e-54 190
MsG0480022389.01.T01 MTR_2g079280 41.304 230 91 6 637 852 94 293 1.90e-48 174
MsG0480022389.01.T01 MTR_4g007210 38.428 229 117 5 637 852 51 268 2.16e-39 151
MsG0480022389.01.T01 MTR_5g075580 32.500 120 68 4 685 801 5 114 5.35e-12 63.9
MsG0480022389.01.T01 MTR_5g075580 32.283 127 73 4 679 802 28 144 6.24e-12 64.7
MsG0480022389.01.T01 MTR_8g085690 36.559 93 47 4 686 777 56 137 6.67e-12 65.1
MsG0480022389.01.T01 MTR_4g073240 31.746 126 73 4 679 801 28 143 2.12e-11 63.2
MsG0480022389.01.T01 MTR_3g062450 31.496 127 74 4 679 802 28 144 2.27e-11 63.2
MsG0480022389.01.T01 MTR_7g116940 31.496 127 74 4 679 802 28 144 3.06e-11 62.8
MsG0480022389.01.T01 MTR_4g073240 31.667 120 69 4 685 801 5 114 3.48e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022389.01.T01 AT2G33770 46.601 912 416 16 21 891 20 901 0.0 788
MsG0480022389.01.T01 AT2G16920 37.015 670 345 18 290 897 447 1101 4.68e-118 386
MsG0480022389.01.T01 AT2G16920 39.768 259 150 4 30 283 118 375 3.04e-51 196
MsG0480022389.01.T01 AT2G16920 37.015 670 345 18 290 897 447 1101 4.68e-118 386
MsG0480022389.01.T01 AT2G16920 39.768 259 150 4 30 283 118 375 3.04e-51 196
MsG0480022389.01.T01 AT1G53025 49.442 269 117 6 637 887 244 511 1.34e-77 263
MsG0480022389.01.T01 AT1G53025 49.442 269 117 6 637 887 244 511 2.93e-77 262
MsG0480022389.01.T01 AT3G15355 52.193 228 95 3 637 851 305 531 1.07e-73 254
MsG0480022389.01.T01 AT1G53023 45.487 277 112 5 637 886 21 285 2.58e-70 236
MsG0480022389.01.T01 AT5G41700 31.757 148 87 5 657 801 8 144 2.48e-12 65.9
MsG0480022389.01.T01 AT1G64230 32.283 127 73 4 679 802 28 144 5.55e-12 65.1
MsG0480022389.01.T01 AT1G64230 32.283 127 73 4 679 802 28 144 5.55e-12 65.1
MsG0480022389.01.T01 AT1G64230 32.283 127 73 4 679 802 37 153 7.03e-12 64.7
MsG0480022389.01.T01 AT1G64230 32.540 126 72 4 679 801 70 185 1.12e-11 65.1
MsG0480022389.01.T01 AT1G64230 32.540 126 72 4 679 801 70 185 1.12e-11 65.1
MsG0480022389.01.T01 AT5G41700 31.746 126 73 4 679 801 28 143 3.08e-11 62.8
MsG0480022389.01.T01 AT5G41700 31.746 126 73 4 679 801 28 143 3.08e-11 62.8
MsG0480022389.01.T01 AT5G41700 31.746 126 73 4 679 801 28 143 3.08e-11 62.8
MsG0480022389.01.T01 AT4G27960 36.735 98 52 3 679 776 28 115 5.24e-11 62.0
MsG0480022389.01.T01 AT3G08690 31.746 126 73 4 679 801 28 143 6.48e-11 62.0
MsG0480022389.01.T01 AT3G08690 31.746 126 73 4 679 801 28 143 6.48e-11 62.0
MsG0480022389.01.T01 AT5G53300 36.735 98 52 3 679 776 28 115 7.41e-11 61.6
MsG0480022389.01.T01 AT5G53300 36.735 98 52 3 679 776 28 115 7.41e-11 61.6
MsG0480022389.01.T01 AT5G53300 36.735 98 52 3 679 776 28 115 7.41e-11 61.6

Find 221 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTGTGTTGGCACTGTTAT+TGG 0.163936 4:+71987770 MsG0480022389.01.T01:CDS
TTATAAACACACATGAATTT+TGG 0.167148 4:+71987372 MsG0480022389.01.T01:CDS
TAAAGTAAGGCTTCTCATTA+AGG 0.222829 4:-71990153 None:intergenic
GTGGACTTGGAAAATGTTAA+AGG 0.236097 4:+71986648 MsG0480022389.01.T01:CDS
TTCCCTGATTCATATAAATT+AGG 0.237543 4:-71990025 None:intergenic
CTTCATATCCAGAAGTTATT+AGG 0.238791 4:+71988808 MsG0480022389.01.T01:CDS
TCGTTATCCATTTCAAATTT+AGG 0.244038 4:-71988693 None:intergenic
CTTGGTGGAACTTCCATTTC+AGG 0.247256 4:+71988654 MsG0480022389.01.T01:CDS
GTTTCCAAATCTTTCTTATC+AGG 0.252217 4:-71988726 None:intergenic
AATCCTAATTTATATGAATC+AGG 0.272096 4:+71990022 MsG0480022389.01.T01:CDS
ACCTTGTTAACTCTTGTATT+GGG 0.272160 4:+71987246 MsG0480022389.01.T01:CDS
CTGCGCCTGTCCAAGTATTT+AGG 0.279333 4:-71990063 None:intergenic
GAATATGCTGGATTTAATAC+TGG 0.292872 4:-71988625 None:intergenic
AACCTTGTTAACTCTTGTAT+TGG 0.293332 4:+71987245 MsG0480022389.01.T01:CDS
CTGGCTCGCTTCTGTTCTTT+CGG 0.300150 4:+71987025 MsG0480022389.01.T01:CDS
GCGCTCCAAACATATACTTT+TGG 0.309942 4:+71990440 MsG0480022389.01.T01:CDS
CATGTCCAAACCGAATAGTT+TGG 0.311035 4:+71987523 MsG0480022389.01.T01:CDS
TATGGACACTGCGAATCTTC+TGG 0.314809 4:-71986870 None:intergenic
ACAAGCCAAAAGTATATGTT+TGG 0.318477 4:-71990445 None:intergenic
GCCGTAATTGTTGGTGCAAC+TGG 0.322353 4:+71989745 MsG0480022389.01.T01:CDS
CTCAGTGCCTAAATTTGAAA+TGG 0.325018 4:+71988686 MsG0480022389.01.T01:CDS
TGTTGATTTGTTTGTGGACT+TGG 0.327847 4:+71986635 MsG0480022389.01.T01:CDS
CAAGTTTGGTGTGTGTTAAC+TGG 0.327864 4:+71987006 MsG0480022389.01.T01:CDS
ACTCTCTGCCCTGGATAGTA+TGG 0.331175 4:-71986888 None:intergenic
GAGCATATTATCAAGTTTAG+AGG 0.332505 4:+71986503 MsG0480022389.01.T01:CDS
CATGGCTCGGTCGGGCTCAA+AGG 0.334629 4:+71986751 MsG0480022389.01.T01:CDS
CAGATGGTGCACTACAATTC+TGG 0.336019 4:+71989986 MsG0480022389.01.T01:intron
CATCAGTTTGTACTGGAAAA+AGG 0.338272 4:+71987398 MsG0480022389.01.T01:CDS
GGCCGCTCGAGGAAGGAAAA+AGG 0.340433 4:-71988589 None:intergenic
ATTGATATCACACATAAGTT+TGG 0.341539 4:-71990688 None:intergenic
TCTTTCTAAGGCAATGATAT+CGG 0.347103 4:-71986817 None:intergenic
GAACATAAATAGAGTCTGTT+TGG 0.348915 4:-71989690 None:intergenic
TGGAAGTTCCACCAAGTGTT+TGG 0.349299 4:-71988647 None:intergenic
AGTCATCTTGATAATTCATT+TGG 0.349814 4:-71987727 None:intergenic
GCAAAATGGTGAACATAGTT+TGG 0.354706 4:+71987316 MsG0480022389.01.T01:CDS
CCTCAGCTCTACCTATTTGT+TGG 0.355681 4:-71990192 None:intergenic
TTATCCTGATAAGAAAGATT+TGG 0.357619 4:+71988722 MsG0480022389.01.T01:CDS
TGATGGTAGAAAAGAGAATT+TGG 0.358050 4:+71988545 MsG0480022389.01.T01:CDS
TAACATCAAACTGCTTAAAC+TGG 0.358400 4:-71988881 None:intergenic
CACATAAGTTTGGAATATAT+TGG 0.361447 4:-71990678 None:intergenic
TCGTCTCCATCCAAACTATT+CGG 0.364995 4:-71987533 None:intergenic
AAAAGAATTGTCAACATTGC+AGG 0.365225 4:+71988944 MsG0480022389.01.T01:CDS
CTCTTATTTCATATGTTACA+TGG 0.368560 4:-71990827 None:intergenic
ACCCTTCCCTTCTGTCCACT+TGG 0.373766 4:-71986606 None:intergenic
TCAAGTTCTTCTCTCTCTAC+AGG 0.375552 4:+71990123 MsG0480022389.01.T01:CDS
TACATAATCACCTTCTGAAA+TGG 0.376474 4:-71986718 None:intergenic
ATCCTGCAGAAGTCCCCTTC+TGG 0.376940 4:-71990521 None:intergenic
TCATGGATCCTAATAACTTC+TGG 0.378132 4:-71988816 None:intergenic
TGGTGATGTGGAGGTGAAAT+TGG 0.381248 4:+71987802 MsG0480022389.01.T01:CDS
TCCAGTTGCACCAACAATTA+CGG 0.382014 4:-71989746 None:intergenic
GCTGGTTATGACCAACAAAT+AGG 0.391028 4:+71990181 MsG0480022389.01.T01:CDS
GAGAAGAACTTGAAGAATAG+TGG 0.392888 4:-71990113 None:intergenic
TGAAGAATAGTGGAGGTTCC+AGG 0.394764 4:-71990103 None:intergenic
CTAAGGGGCCATGGCTCGGT+CGG 0.396317 4:+71986742 MsG0480022389.01.T01:CDS
TGCTGATTTAGAAGCGTTGT+AGG 0.399875 4:-71986922 None:intergenic
GACAAGAGGGTGTAAGAGTC+AGG 0.400833 4:+71987217 MsG0480022389.01.T01:CDS
TAATAGATACAACATAGATT+TGG 0.401612 4:-71990263 None:intergenic
GGCTCTGAAGTGTGGAATCC+TGG 0.402574 4:+71990085 MsG0480022389.01.T01:CDS
CAAAATGGTGAACATAGTTT+GGG 0.404147 4:+71987317 MsG0480022389.01.T01:CDS
TCCATCCAAACTATTCGGTT+TGG 0.408736 4:-71987528 None:intergenic
TGTGTGTTTATAACATTCAC+TGG 0.409667 4:-71987362 None:intergenic
AAGCTTACAGGTGGTTCGTT+AGG 0.414305 4:-71989823 None:intergenic
GAAATAAGAGATACATTGAT+TGG 0.417699 4:+71990840 MsG0480022389.01.T01:three_prime_UTR
ATCAATTCCCTTGTCACAAA+AGG 0.418169 4:-71990586 None:intergenic
TGAGGAAAATGCTCCTGAAA+TGG 0.419447 4:-71988667 None:intergenic
TGTGATTATGTATCATATAA+AGG 0.419725 4:+71990799 MsG0480022389.01.T01:three_prime_UTR
ATGGCTCGGTCGGGCTCAAA+GGG 0.420283 4:+71986752 MsG0480022389.01.T01:CDS
AGAAGGTGATTATGTAACTA+AGG 0.421683 4:+71986725 MsG0480022389.01.T01:CDS
TATGCTGATGATAGCTTCAA+TGG 0.425404 4:-71986076 None:intergenic
AACCAGAAGGGGACTTCTGC+AGG 0.428580 4:+71990519 MsG0480022389.01.T01:CDS
TTGCCACAAAATGTCAACTT+TGG 0.438550 4:-71987297 None:intergenic
AAGCCTTACTTTAATGAGGC+TGG 0.438912 4:+71990163 MsG0480022389.01.T01:CDS
GACAAGTGTTGATTTGTTTG+TGG 0.439155 4:+71986629 MsG0480022389.01.T01:CDS
GTCTGAGTCTCCTAAATACT+TGG 0.441688 4:+71990053 MsG0480022389.01.T01:CDS
CAGGATGGCTATGTGGAACT+TGG 0.442039 4:+71986943 MsG0480022389.01.T01:CDS
GTTGAACAGTCTGTTCCTCT+TGG 0.445698 4:-71987163 None:intergenic
GAAGTACAAAATCAAGAGAT+TGG 0.446095 4:-71990758 None:intergenic
TTTCTGTATCTTTATCAGCT+TGG 0.448025 4:-71987658 None:intergenic
TAGTTTGGATGGAGACGAAA+TGG 0.451117 4:+71987538 MsG0480022389.01.T01:CDS
TCAATCATCTCTTGAGGAGC+AGG 0.452258 4:-71988157 None:intergenic
CAGCGCAGGTAACAGTCATC+AGG 0.452698 4:-71987752 None:intergenic
CTCACTACTGCTGCTGTCAC+TGG 0.452824 4:-71986439 None:intergenic
TAAGGGGCCATGGCTCGGTC+GGG 0.453566 4:+71986743 MsG0480022389.01.T01:CDS
CGGTCGGGCTCAAAGGGTTG+TGG 0.453882 4:+71986758 MsG0480022389.01.T01:CDS
AACATAAATAGAGTCTGTTT+GGG 0.457745 4:-71989689 None:intergenic
ACCAAGTGTTTGGAATATGC+TGG 0.459562 4:-71988637 None:intergenic
TCTGGAAATTTACGAGTCAA+TGG 0.462644 4:-71986852 None:intergenic
GCTTGTAAAGCATATCTTGA+AGG 0.464757 4:+71990462 MsG0480022389.01.T01:CDS
TTGGCCACATCAGTTTGTAC+TGG 0.474189 4:+71987391 MsG0480022389.01.T01:CDS
ACTGTTATTGGTTTCAAAGA+TGG 0.475922 4:+71987782 MsG0480022389.01.T01:CDS
TCGCAGTGTCCATACTATCC+AGG 0.476869 4:+71986879 MsG0480022389.01.T01:CDS
CAAACTATTCGGTTTGGACA+TGG 0.477382 4:-71987522 None:intergenic
TGAGAAGCCTTACTTTAATG+AGG 0.477468 4:+71990159 MsG0480022389.01.T01:CDS
TATCTTGAAGGTGCTTCCAT+TGG 0.479359 4:+71990474 MsG0480022389.01.T01:CDS
CCCCAATACAAGAGTTAACA+AGG 0.479939 4:-71987247 None:intergenic
TTGTGCTGTCGATGCAAGTT+TGG 0.480632 4:+71986992 MsG0480022389.01.T01:CDS
TTAAGCCTGGCAGTAAAAGA+TGG 0.487073 4:+71987438 MsG0480022389.01.T01:CDS
AAGTCTACCTTCTGATAAGA+AGG 0.487556 4:+71988186 MsG0480022389.01.T01:CDS
TCAAGTTTAGAGGAAAGCAT+TGG 0.490374 4:+71986513 MsG0480022389.01.T01:CDS
CTCATGCGAGCCGTAATTGT+TGG 0.490591 4:+71989736 MsG0480022389.01.T01:CDS
CGGACAAACTTTCGAAGATT+CGG 0.491223 4:+71986694 MsG0480022389.01.T01:CDS
ACAAAAGGCTTCTACAAGCT+TGG 0.492809 4:-71990571 None:intergenic
TGTGACAGGCATATAATTGA+TGG 0.496070 4:+71986383 MsG0480022389.01.T01:intron
CAAGTTTAGAGGAAAGCATT+GGG 0.497314 4:+71986514 MsG0480022389.01.T01:CDS
CATTGCCTTAGAAAGAGAAA+AGG 0.497528 4:+71986824 MsG0480022389.01.T01:CDS
AAGTTTGGAATATATTGGTC+GGG 0.498457 4:-71990673 None:intergenic
AAAAGCACGACAACACGGTC+AGG 0.500051 4:-71987097 None:intergenic
ACCTTTCCCTTCTTATCAGA+AGG 0.504832 4:-71988193 None:intergenic
AATGTTCAGGACTTGTTAAG+TGG 0.505536 4:+71988522 MsG0480022389.01.T01:intron
ATGCTTCAATTTGCTTGAGA+AGG 0.505815 4:+71986130 MsG0480022389.01.T01:five_prime_UTR
TGCAACTCATCCGTTGGATG+TGG 0.506708 4:-71988768 None:intergenic
TAACCAGCCTCATTAAAGTA+AGG 0.506806 4:-71990166 None:intergenic
CAAACTGGCAGCTTGGTGAC+TGG 0.507507 4:+71987126 MsG0480022389.01.T01:CDS
ATCCTAATTTATATGAATCA+GGG 0.512462 4:+71990023 MsG0480022389.01.T01:CDS
CTTTGATATATGTTTCCCTC+CGG 0.513418 4:+71989795 MsG0480022389.01.T01:CDS
TCGTGTGTTTGAAGAAAGAA+TGG 0.514633 4:+71989711 MsG0480022389.01.T01:CDS
GATAAAGATACAGAAAAGTC+GGG 0.517044 4:+71987665 MsG0480022389.01.T01:CDS
TCTTACGATCCTCTTAAGCC+TGG 0.518535 4:+71987425 MsG0480022389.01.T01:CDS
GACTGTTACCTGCGCTGTGT+TGG 0.520842 4:+71987758 MsG0480022389.01.T01:CDS
CTGTGGATGCTCCACCATGC+TGG 0.521980 4:+71987060 MsG0480022389.01.T01:CDS
TCACACGCAAACTGGCAGCT+TGG 0.522952 4:+71987119 MsG0480022389.01.T01:CDS
GTCAGATCCAAGTGGACAGA+AGG 0.524001 4:+71986599 MsG0480022389.01.T01:CDS
GAAGGTGATTATGTAACTAA+GGG 0.524599 4:+71986726 MsG0480022389.01.T01:CDS
TGATAAAGATACAGAAAAGT+CGG 0.525150 4:+71987664 MsG0480022389.01.T01:CDS
TAAGCCTGGCAGTAAAAGAT+GGG 0.527531 4:+71987439 MsG0480022389.01.T01:CDS
GCGGAAAATCATTCTTGTCA+TGG 0.528752 4:-71988833 None:intergenic
TTAACCTTTACTCTCTGCCC+TGG 0.532334 4:-71986897 None:intergenic
TTCACTGGGAGTAAACTCTC+TGG 0.532864 4:-71987347 None:intergenic
CTAAATACTTGGACAGGCGC+AGG 0.533981 4:+71990064 MsG0480022389.01.T01:CDS
TATGAGTAGTGATTCGGAAT+GGG 0.535163 4:+71986410 MsG0480022389.01.T01:CDS
ATCCAAGTGGACAGAAGGGA+AGG 0.535173 4:+71986604 MsG0480022389.01.T01:CDS
CCTTGTTAACTCTTGTATTG+GGG 0.535470 4:+71987247 MsG0480022389.01.T01:CDS
CTGGAACTCCGTATCATGAC+GGG 0.537749 4:+71989764 MsG0480022389.01.T01:CDS
GTAGATTGCAACTCATCCGT+TGG 0.540415 4:-71988774 None:intergenic
AGTCTCCTAAATACTTGGAC+AGG 0.541227 4:+71990058 MsG0480022389.01.T01:CDS
GCAGCTTGGTGACTGGTGCA+TGG 0.542630 4:+71987133 MsG0480022389.01.T01:CDS
TGGAGAGACAATCAAGATGA+AGG 0.543990 4:+71986963 MsG0480022389.01.T01:CDS
AGCATATTCCAAACACTTGG+TGG 0.546181 4:+71988639 MsG0480022389.01.T01:CDS
CATATAAATTAGGATTTAAG+CGG 0.547126 4:-71990015 None:intergenic
TAAGTTTGGAATATATTGGT+CGG 0.549032 4:-71990674 None:intergenic
CTTGGAAAATGTTAAAGGAA+AGG 0.549568 4:+71986653 MsG0480022389.01.T01:CDS
GTAACTAAGGGGCCATGGCT+CGG 0.550278 4:+71986738 MsG0480022389.01.T01:CDS
GGATGCTATGAGTAGTGATT+CGG 0.552865 4:+71986404 MsG0480022389.01.T01:CDS
TTGCAGCTCAACAAACTGAC+TGG 0.554166 4:-71990610 None:intergenic
AAGAACAACCCGTCATGATA+CGG 0.555892 4:-71989772 None:intergenic
GTGGAGGTGAAATTGGCTAC+TGG 0.556086 4:+71987809 MsG0480022389.01.T01:CDS
TTTGGATGGAGACGAAATGG+AGG 0.556480 4:+71987541 MsG0480022389.01.T01:CDS
AAGATTCGGTCCATTTCAGA+AGG 0.557165 4:+71986708 MsG0480022389.01.T01:CDS
CAGGACTTGTTAAGTGGTGA+TGG 0.557746 4:+71988528 MsG0480022389.01.T01:intron
CTATGAGTAGTGATTCGGAA+TGG 0.558640 4:+71986409 MsG0480022389.01.T01:CDS
CAATCATCTCTTGAGGAGCA+GGG 0.559511 4:-71988156 None:intergenic
TACAACGCTTCTAAATCAGC+AGG 0.560075 4:+71986924 MsG0480022389.01.T01:CDS
GTTCAAAGGCCGCTCGAGGA+AGG 0.560557 4:-71988596 None:intergenic
CTTTGAGCCCGACCGAGCCA+TGG 0.562374 4:-71986750 None:intergenic
TGGTGCACTACAATTCTGGC+GGG 0.562522 4:+71989990 MsG0480022389.01.T01:CDS
TCCAGCATATTCCAAACACT+TGG 0.562882 4:+71988636 MsG0480022389.01.T01:CDS
CGCAGTGTCCATACTATCCA+GGG 0.563072 4:+71986880 MsG0480022389.01.T01:CDS
AGACATCATCGTTAAACAGA+TGG 0.564845 4:-71990886 None:intergenic
CCGCGTTCAATCATCTCTTG+AGG 0.564947 4:-71988163 None:intergenic
TCCAAACCGAATAGTTTGGA+TGG 0.569256 4:+71987527 MsG0480022389.01.T01:CDS
GTTACTGTATTGTTTGACGA+TGG 0.570953 4:+71986786 MsG0480022389.01.T01:CDS
GAAGGTGCTTCCATTGGATG+TGG 0.572328 4:+71990480 MsG0480022389.01.T01:CDS
ACTCATAGTAAGACTTCGTG+TGG 0.579194 4:-71987192 None:intergenic
CTGCATTGAACCACATCCAA+CGG 0.580334 4:+71988758 MsG0480022389.01.T01:CDS
CTATCCAGGGCAGAGAGTAA+AGG 0.580957 4:+71986893 MsG0480022389.01.T01:CDS
CTGTTGCTTTCTAAAGAAAG+CGG 0.581297 4:-71988852 None:intergenic
ACAAGAGGGTGTAAGAGTCA+GGG 0.584173 4:+71987218 MsG0480022389.01.T01:CDS
ATTATGTAACTAAGGGGCCA+TGG 0.589006 4:+71986733 MsG0480022389.01.T01:CDS
TGCGAAGGAGCATACTGTAA+AGG 0.590233 4:+71987481 MsG0480022389.01.T01:CDS
AACTGAACATGAAAACCAGA+AGG 0.591244 4:+71990506 MsG0480022389.01.T01:CDS
CTGTCCACTTGGATCTGACA+CGG 0.593862 4:-71986595 None:intergenic
GCTCCTTCGCATCCACACAT+TGG 0.595521 4:-71987469 None:intergenic
CAGTGACAGCAGCAGTAGTG+AGG 0.599348 4:+71986440 MsG0480022389.01.T01:CDS
TGTTATAGAAAGTTGTTCTG+AGG 0.599468 4:+71988899 MsG0480022389.01.T01:CDS
AGTCTACCTTCTGATAAGAA+GGG 0.599826 4:+71988187 MsG0480022389.01.T01:CDS
CAGGCGCAGGCTCTGAAGTG+TGG 0.599880 4:+71990077 MsG0480022389.01.T01:CDS
AGCATACTGTAAAGGTACAA+TGG 0.603087 4:+71987489 MsG0480022389.01.T01:CDS
TAACAGTGCCAACACAGCGC+AGG 0.604202 4:-71987766 None:intergenic
TGGTTTCAAAGATGGTGATG+TGG 0.607004 4:+71987790 MsG0480022389.01.T01:CDS
ACCTTCTGATAAGAAGGGAA+AGG 0.610683 4:+71988192 MsG0480022389.01.T01:CDS
AAAAGTTCAAAGGCCGCTCG+AGG 0.610806 4:-71988600 None:intergenic
GGCTACTGGTTTCACAACCA+AGG 0.613861 4:+71987823 MsG0480022389.01.T01:CDS
TTGGAATCTTGCCAGCATGG+TGG 0.615083 4:-71987071 None:intergenic
AAATCAGCAGGATGGCTATG+TGG 0.615349 4:+71986936 MsG0480022389.01.T01:CDS
TTCGGATAGCAATTTGACTG+TGG 0.617830 4:+71987043 MsG0480022389.01.T01:CDS
ACTGGAACTCCGTATCATGA+CGG 0.617936 4:+71989763 MsG0480022389.01.T01:CDS
TCAGATCCAAGTGGACAGAA+GGG 0.623264 4:+71986600 MsG0480022389.01.T01:CDS
GGTGGTTCGTTAGGATACTC+CGG 0.623296 4:-71989814 None:intergenic
ACTGAACATGAAAACCAGAA+GGG 0.628542 4:+71990507 MsG0480022389.01.T01:CDS
TGTCCAATGTGTGGATGCGA+AGG 0.629958 4:+71987466 MsG0480022389.01.T01:CDS
ACTTCTATGATTAGACGTTG+TGG 0.630040 4:+71990776 MsG0480022389.01.T01:three_prime_UTR
CTGAACATGAAAACCAGAAG+GGG 0.630377 4:+71990508 MsG0480022389.01.T01:CDS
AATCATCTCTTGAGGAGCAG+GGG 0.631754 4:-71988155 None:intergenic
ACATAGATTTGGCTGTGACA+AGG 0.632266 4:-71990252 None:intergenic
GTGTGTTTATAACATTCACT+GGG 0.634130 4:-71987361 None:intergenic
ATGGTGCACTACAATTCTGG+CGG 0.635699 4:+71989989 MsG0480022389.01.T01:CDS
TCCAAGTGGACAGAAGGGAA+GGG 0.640608 4:+71986605 MsG0480022389.01.T01:CDS
TGGGTGCTCAACTAGTTCGT+AGG 0.642489 4:-71987576 None:intergenic
AGCGCAGGTAACAGTCATCA+GGG 0.642525 4:-71987751 None:intergenic
AAGAACTTGAAGAATAGTGG+AGG 0.645772 4:-71990110 None:intergenic
CATTTCAAATTTAGGCACTG+AGG 0.648291 4:-71988685 None:intergenic
TTTCGGATTGATAAACACGA+AGG 0.649683 4:+71988121 MsG0480022389.01.T01:CDS
GTGCATGGTTGCAGACCAAG+AGG 0.653228 4:+71987148 MsG0480022389.01.T01:CDS
CAACAAATAGGTAGAGCTGA+GGG 0.656761 4:+71990193 MsG0480022389.01.T01:CDS
CTCATAGTAAGACTTCGTGT+GGG 0.656951 4:-71987191 None:intergenic
GGTTCGTTAGGATACTCCGG+AGG 0.659291 4:-71989811 None:intergenic
TCTATTACGAAAGCCACCCA+AGG 0.660166 4:+71990279 MsG0480022389.01.T01:CDS
TGGTGATATTATGTTCAAGG+CGG 0.662885 4:+71987616 MsG0480022389.01.T01:CDS
CTTACTATGAGTATGACAAG+AGG 0.669246 4:+71987203 MsG0480022389.01.T01:CDS
ATGGGGTGTTGTCCAATGTG+TGG 0.669989 4:+71987457 MsG0480022389.01.T01:CDS
CCAACAAATAGGTAGAGCTG+AGG 0.673085 4:+71990192 MsG0480022389.01.T01:CDS
TTACTATGAGTATGACAAGA+GGG 0.674623 4:+71987204 MsG0480022389.01.T01:CDS
GGGTAATGACATGAATGCAG+AGG 0.679319 4:+71987685 MsG0480022389.01.T01:CDS
TTTCAAAGATGGTGATGTGG+AGG 0.685458 4:+71987793 MsG0480022389.01.T01:CDS
ACGCTTCTAAATCAGCAGGA+TGG 0.687059 4:+71986928 MsG0480022389.01.T01:CDS
CCTCAAGAGATGATTGAACG+CGG 0.691236 4:+71988163 MsG0480022389.01.T01:CDS
GTGTGAAAAGCACGACAACA+CGG 0.692670 4:-71987102 None:intergenic
AAGCCTGGCAGTAAAAGATG+GGG 0.699162 4:+71987440 MsG0480022389.01.T01:CDS
AAGGTGATTATGTAACTAAG+GGG 0.699693 4:+71986727 MsG0480022389.01.T01:CDS
GTTCGTTAGGATACTCCGGA+GGG 0.719877 4:-71989810 None:intergenic
TGCTCCGTGTCAGATCCAAG+TGG 0.720832 4:+71986591 MsG0480022389.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTTCATCTTTATTATTT+AGG - Chr4:71989365-71989384 None:intergenic 10.0%
!! TTGAAAAATATAAACAAAAT+TGG + Chr4:71989417-71989436 MsG0480022389.01.T01:intron 10.0%
!!! AAATTAATCTTTGAAAAAAA+CGG - Chr4:71988449-71988468 None:intergenic 10.0%
!!! TTTAAAATTGAAAATGAATT+TGG - Chr4:71988392-71988411 None:intergenic 10.0%
!! AAAAATATAAACAAAATTGG+TGG + Chr4:71989420-71989439 MsG0480022389.01.T01:intron 15.0%
!! AGAAATAAGTATATAAAACA+GGG - Chr4:71989144-71989163 None:intergenic 15.0%
!! ATTTGATATACTAATGAAAA+TGG + Chr4:71989599-71989618 MsG0480022389.01.T01:intron 15.0%
!!! AAAATAAACCTTATTTTCAT+GGG - Chr4:71990335-71990354 None:intergenic 15.0%
!!! TTCATTTTCAATTTTAAATG+AGG + Chr4:71988394-71988413 MsG0480022389.01.T01:intron 15.0%
!!! TTTGATTTATAGGTAAAAAA+AGG + Chr4:71989028-71989047 MsG0480022389.01.T01:intron 15.0%
!! AATCCTAATTTATATGAATC+AGG + Chr4:71990022-71990041 MsG0480022389.01.T01:CDS 20.0%
!! ACTATATTTACAGAAAATCA+TGG - Chr4:71987853-71987872 None:intergenic 20.0%
!! ATATCAAATAATTAACGCTT+AGG - Chr4:71989588-71989607 None:intergenic 20.0%
!! ATCCTAATTTATATGAATCA+GGG + Chr4:71990023-71990042 MsG0480022389.01.T01:CDS 20.0%
!! ATGAACATTAGAAGTAAATA+AGG - Chr4:71986173-71986192 None:intergenic 20.0%
!! ATTTATAGGTAAAAAAAGGT+TGG + Chr4:71989032-71989051 MsG0480022389.01.T01:intron 20.0%
!! CATATAAATTAGGATTTAAG+CGG - Chr4:71990018-71990037 None:intergenic 20.0%
!! CATATCATCAATTTCAAATA+AGG + Chr4:71986234-71986253 MsG0480022389.01.T01:intron 20.0%
!! GAGAAATAAGTATATAAAAC+AGG - Chr4:71989145-71989164 None:intergenic 20.0%
!! GGTATTAAAAAATGTAAACT+CGG + Chr4:71986674-71986693 MsG0480022389.01.T01:CDS 20.0%
!! TAATAGATACAACATAGATT+TGG - Chr4:71990266-71990285 None:intergenic 20.0%
!! TAGAAAATAAGATACAACAT+TGG - Chr4:71988011-71988030 None:intergenic 20.0%
!! TAGAGAAAATGTACTAATAT+AGG + Chr4:71988361-71988380 MsG0480022389.01.T01:intron 20.0%
!! TGTGATTATGTATCATATAA+AGG + Chr4:71990799-71990818 MsG0480022389.01.T01:three_prime_UTR 20.0%
!! TTTATAGGTAAAAAAAGGTT+GGG + Chr4:71989033-71989052 MsG0480022389.01.T01:intron 20.0%
!! TTTCCAGATAAAATCTTAAA+TGG - Chr4:71989547-71989566 None:intergenic 20.0%
!!! AATGGATTTCCTTTTTAAAA+TGG - Chr4:71989269-71989288 None:intergenic 20.0%
!!! ATTGGGGAATTTTTTATAAT+TGG + Chr4:71987263-71987282 MsG0480022389.01.T01:CDS 20.0%
!!! CAAAATAAACCTTATTTTCA+TGG - Chr4:71990336-71990355 None:intergenic 20.0%
!!! GAAGAAATTGATTTTCAATA+TGG + Chr4:71986468-71986487 MsG0480022389.01.T01:CDS 20.0%
!!! TTATAAACACACATGAATTT+TGG + Chr4:71987372-71987391 MsG0480022389.01.T01:CDS 20.0%
!!! TTGGGGAATTTTTTATAATT+GGG + Chr4:71987264-71987283 MsG0480022389.01.T01:CDS 20.0%
! AACATAAATAGAGTCTGTTT+GGG - Chr4:71989692-71989711 None:intergenic 25.0%
! AATACTGGAAAAAAGTTCAA+AGG - Chr4:71988613-71988632 None:intergenic 25.0%
! ACATCACATTCAGTTTATAT+TGG - Chr4:71988500-71988519 None:intergenic 25.0%
! ATATACATTCTCACTCAAAA+TGG - Chr4:71989287-71989306 None:intergenic 25.0%
! ATGATATGCATAGTTTAGAA+TGG - Chr4:71986222-71986241 None:intergenic 25.0%
! ATTGATATCACACATAAGTT+TGG - Chr4:71990691-71990710 None:intergenic 25.0%
! CATAATATCACCAAAAAAAC+AGG - Chr4:71987609-71987628 None:intergenic 25.0%
! CATCACATTCAGTTTATATT+GGG - Chr4:71988499-71988518 None:intergenic 25.0%
! GAAATAAGAGATACATTGAT+TGG + Chr4:71990840-71990859 MsG0480022389.01.T01:three_prime_UTR 25.0%
! GTAACATAATATTAGAACCA+TGG + Chr4:71987928-71987947 MsG0480022389.01.T01:intron 25.0%
! TACTACGTTGATATATTAGT+AGG + Chr4:71988993-71989012 MsG0480022389.01.T01:intron 25.0%
! TAGTATCAAAATATTGTGAC+AGG + Chr4:71986369-71986388 MsG0480022389.01.T01:intron 25.0%
! TCAATCCGAAAAATTTCATA+AGG - Chr4:71988112-71988131 None:intergenic 25.0%
! TCGTTATCCATTTCAAATTT+AGG - Chr4:71988696-71988715 None:intergenic 25.0%
! TGATAAAGATACAGAAAAGT+CGG + Chr4:71987664-71987683 MsG0480022389.01.T01:CDS 25.0%
! TGGAAACTATAATCAAAAGA+CGG + Chr4:71988328-71988347 MsG0480022389.01.T01:intron 25.0%
! TTATCCTGATAAGAAAGATT+TGG + Chr4:71988722-71988741 MsG0480022389.01.T01:CDS 25.0%
! TTCCCTGATTCATATAAATT+AGG - Chr4:71990028-71990047 None:intergenic 25.0%
! TTGATATATTAGTAGGCTAA+CGG + Chr4:71989000-71989019 MsG0480022389.01.T01:intron 25.0%
!! AGTCATCTTGATAATTCATT+TGG - Chr4:71987730-71987749 None:intergenic 25.0%
!! CACATAAGTTTGGAATATAT+TGG - Chr4:71990681-71990700 None:intergenic 25.0%
!! CATATCAATTTTAAGCTTGT+TGG + Chr4:71990731-71990750 MsG0480022389.01.T01:three_prime_UTR 25.0%
!! CTCTTATTTCATATGTTACA+TGG - Chr4:71990830-71990849 None:intergenic 25.0%
!! TAAAACCTTTTCTCTTTCTA+AGG - Chr4:71986832-71986851 None:intergenic 25.0%
!! TAAGTTTGGAATATATTGGT+CGG - Chr4:71990677-71990696 None:intergenic 25.0%
!! TCTTTGAAAAAAACGGATTT+AGG - Chr4:71988442-71988461 None:intergenic 25.0%
!! TGATATGCATAGTTTAGAAT+GGG - Chr4:71986221-71986240 None:intergenic 25.0%
!!! AACGGTTTTCTTTGATTTAT+AGG + Chr4:71989018-71989037 MsG0480022389.01.T01:intron 25.0%
!!! AATTTGATTTTGGGGATATT+AGG + Chr4:71989393-71989412 MsG0480022389.01.T01:intron 25.0%
!!! AGAAACCAGAATTTGATTTT+GGG + Chr4:71989384-71989403 MsG0480022389.01.T01:intron 25.0%
!!! ATTTTGAGTGAGAATGTATA+TGG + Chr4:71989286-71989305 MsG0480022389.01.T01:intron 25.0%
!!! GAAATTGATTTTCAATATGG+TGG + Chr4:71986471-71986490 MsG0480022389.01.T01:CDS 25.0%
!!! TAGAAACCAGAATTTGATTT+TGG + Chr4:71989383-71989402 MsG0480022389.01.T01:intron 25.0%
!!! TGATATTTGTTTTTCCAAAC+AGG + Chr4:71988081-71988100 MsG0480022389.01.T01:intron 25.0%
!!! TTTTGGTGATATTATGTTCA+AGG + Chr4:71987613-71987632 MsG0480022389.01.T01:CDS 25.0%
AAAAAAAGGTTGGGTGAAAA+AGG + Chr4:71989042-71989061 MsG0480022389.01.T01:intron 30.0%
AAAAGAATTGTCAACATTGC+AGG + Chr4:71988944-71988963 MsG0480022389.01.T01:CDS 30.0%
AACCTTGTTAACTCTTGTAT+TGG + Chr4:71987245-71987264 MsG0480022389.01.T01:CDS 30.0%
AACTACACTTAAAAGCTTAC+AGG - Chr4:71989838-71989857 None:intergenic 30.0%
AAGGTGATTATGTAACTAAG+GGG + Chr4:71986727-71986746 MsG0480022389.01.T01:CDS 30.0%
ACCTTGTTAACTCTTGTATT+GGG + Chr4:71987246-71987265 MsG0480022389.01.T01:CDS 30.0%
AGAAAGATAAAGTATGTACC+CGG - Chr4:71989103-71989122 None:intergenic 30.0%
AGAAGGTGATTATGTAACTA+AGG + Chr4:71986725-71986744 MsG0480022389.01.T01:CDS 30.0%
ATAAAATCTTAAATGGCCCT+CGG - Chr4:71989540-71989559 None:intergenic 30.0%
ATATCCCCAAAATCAAATTC+TGG - Chr4:71989392-71989411 None:intergenic 30.0%
ATCCATACTTTGACTATATG+TGG - Chr4:71987896-71987915 None:intergenic 30.0%
ATCCGAAAAATTTCATAAGG+CGG - Chr4:71988109-71988128 None:intergenic 30.0%
ATGATGCTTAAACTCGAATT+AGG + Chr4:71989201-71989220 MsG0480022389.01.T01:intron 30.0%
CAAAAAAACAGGAGTAATCT+GGG - Chr4:71987598-71987617 None:intergenic 30.0%
CAAAATGGTGAACATAGTTT+GGG + Chr4:71987317-71987336 MsG0480022389.01.T01:CDS 30.0%
CTTCATATCCAGAAGTTATT+AGG + Chr4:71988808-71988827 MsG0480022389.01.T01:CDS 30.0%
CTTGGAAAATGTTAAAGGAA+AGG + Chr4:71986653-71986672 MsG0480022389.01.T01:CDS 30.0%
GAACATAAATAGAGTCTGTT+TGG - Chr4:71989693-71989712 None:intergenic 30.0%
GAAGGTGATTATGTAACTAA+GGG + Chr4:71986726-71986745 MsG0480022389.01.T01:CDS 30.0%
GAAGTACAAAATCAAGAGAT+TGG - Chr4:71990761-71990780 None:intergenic 30.0%
GAATATGCTGGATTTAATAC+TGG - Chr4:71988628-71988647 None:intergenic 30.0%
GAATGTGATGTTTAATGTTC+AGG + Chr4:71988509-71988528 MsG0480022389.01.T01:intron 30.0%
GAGCATATTATCAAGTTTAG+AGG + Chr4:71986503-71986522 MsG0480022389.01.T01:CDS 30.0%
GATAAAGATACAGAAAAGTC+GGG + Chr4:71987665-71987684 MsG0480022389.01.T01:CDS 30.0%
GTGTGTTTATAACATTCACT+GGG - Chr4:71987364-71987383 None:intergenic 30.0%
GTTTCCAAATCTTTCTTATC+AGG - Chr4:71988729-71988748 None:intergenic 30.0%
TAAAGTAAGGCTTCTCATTA+AGG - Chr4:71990156-71990175 None:intergenic 30.0%
TAACATCAAACTGCTTAAAC+TGG - Chr4:71988884-71988903 None:intergenic 30.0%
TAGTCAAAGTATGGATTTGA+TGG + Chr4:71987900-71987919 MsG0480022389.01.T01:intron 30.0%
TGAAAAAGGTTCAACAAGAA+TGG + Chr4:71989056-71989075 MsG0480022389.01.T01:intron 30.0%
TGATGGTAGAAAAGAGAATT+TGG + Chr4:71988545-71988564 MsG0480022389.01.T01:CDS 30.0%
TGTGTGTTTATAACATTCAC+TGG - Chr4:71987365-71987384 None:intergenic 30.0%
TGTTATAGAAAGTTGTTCTG+AGG + Chr4:71988899-71988918 MsG0480022389.01.T01:CDS 30.0%
TTACTATGAGTATGACAAGA+GGG + Chr4:71987204-71987223 MsG0480022389.01.T01:CDS 30.0%
TTTCTGTATCTTTATCAGCT+TGG - Chr4:71987661-71987680 None:intergenic 30.0%
! AAGTATGGATTTGATGGTAA+TGG + Chr4:71987906-71987925 MsG0480022389.01.T01:intron 30.0%
! AAGTTTGGAATATATTGGTC+GGG - Chr4:71990676-71990695 None:intergenic 30.0%
! ACAAGCCAAAAGTATATGTT+TGG - Chr4:71990448-71990467 None:intergenic 30.0%
! AGATGTGGTAATTTTACCTT+GGG - Chr4:71990298-71990317 None:intergenic 30.0%
! CTTTTCCCTCATCAAAAAAA+TGG - Chr4:71988929-71988948 None:intergenic 30.0%
! TAAACAAAATTGGTGGTAGT+TGG + Chr4:71989427-71989446 MsG0480022389.01.T01:intron 30.0%
! TACATAATCACCTTCTGAAA+TGG - Chr4:71986721-71986740 None:intergenic 30.0%
! TAGATGTGGTAATTTTACCT+TGG - Chr4:71990299-71990318 None:intergenic 30.0%
! TTCCGCCTTATGAAATTTTT+CGG + Chr4:71988104-71988123 MsG0480022389.01.T01:CDS 30.0%
! TTTGAGAGAACTTTTGTTCA+TGG + Chr4:71986558-71986577 MsG0480022389.01.T01:CDS 30.0%
!! ACTGTTATTGGTTTCAAAGA+TGG + Chr4:71987782-71987801 MsG0480022389.01.T01:CDS 30.0%
!! GAAACCAGAATTTGATTTTG+GGG + Chr4:71989385-71989404 MsG0480022389.01.T01:intron 30.0%
!! GTCTCTTAGCCATTTTAAAA+AGG + Chr4:71989257-71989276 MsG0480022389.01.T01:intron 30.0%
!! TCTTTCTAAGGCAATGATAT+CGG - Chr4:71986820-71986839 None:intergenic 30.0%
!!! ATAAACCTTATTTTCATGGG+AGG - Chr4:71990332-71990351 None:intergenic 30.0%
AACGTAGTATGTCACACTAT+AGG - Chr4:71988982-71989001 None:intergenic 35.0%
AACTGAACATGAAAACCAGA+AGG + Chr4:71990506-71990525 MsG0480022389.01.T01:CDS 35.0%
AAGAACTTGAAGAATAGTGG+AGG - Chr4:71990113-71990132 None:intergenic 35.0%
AAGTCTACCTTCTGATAAGA+AGG + Chr4:71988186-71988205 MsG0480022389.01.T01:CDS 35.0%
ACTGAACATGAAAACCAGAA+GGG + Chr4:71990507-71990526 MsG0480022389.01.T01:CDS 35.0%
ACTTCTATGATTAGACGTTG+TGG + Chr4:71990776-71990795 MsG0480022389.01.T01:three_prime_UTR 35.0%
AGTCTACCTTCTGATAAGAA+GGG + Chr4:71988187-71988206 MsG0480022389.01.T01:CDS 35.0%
ATCAATTCCCTTGTCACAAA+AGG - Chr4:71990589-71990608 None:intergenic 35.0%
CATCAGTTTGTACTGGAAAA+AGG + Chr4:71987398-71987417 MsG0480022389.01.T01:CDS 35.0%
CATTGCCTTAGAAAGAGAAA+AGG + Chr4:71986824-71986843 MsG0480022389.01.T01:CDS 35.0%
CCAAAAAAACAGGAGTAATC+TGG - Chr4:71987599-71987618 None:intergenic 35.0%
CCTTGTTAACTCTTGTATTG+GGG + Chr4:71987247-71987266 MsG0480022389.01.T01:CDS 35.0%
CTCAGTGCCTAAATTTGAAA+TGG + Chr4:71988686-71988705 MsG0480022389.01.T01:CDS 35.0%
CTTACTATGAGTATGACAAG+AGG + Chr4:71987203-71987222 MsG0480022389.01.T01:CDS 35.0%
CTTTGATATATGTTTCCCTC+CGG + Chr4:71989795-71989814 MsG0480022389.01.T01:CDS 35.0%
GAGAAGAACTTGAAGAATAG+TGG - Chr4:71990116-71990135 None:intergenic 35.0%
GAGGAACTAAAGTATAGATG+TGG - Chr4:71990313-71990332 None:intergenic 35.0%
GATCTTTGAACATAAGCGAA+GGG - Chr4:71989906-71989925 None:intergenic 35.0%
GCAAAATGGTGAACATAGTT+TGG + Chr4:71987316-71987335 MsG0480022389.01.T01:CDS 35.0%
GCTTGTAAAGCATATCTTGA+AGG + Chr4:71990462-71990481 MsG0480022389.01.T01:CDS 35.0%
GTCCACATATAGTCAAAGTA+TGG + Chr4:71987891-71987910 MsG0480022389.01.T01:intron 35.0%
GTGGACTTGGAAAATGTTAA+AGG + Chr4:71986648-71986667 MsG0480022389.01.T01:CDS 35.0%
GTGGTAGTTGGAAATAGAAA+TGG + Chr4:71989439-71989458 MsG0480022389.01.T01:intron 35.0%
GTTACTGTATTGTTTGACGA+TGG + Chr4:71986786-71986805 MsG0480022389.01.T01:CDS 35.0%
TAACCAGCCTCATTAAAGTA+AGG - Chr4:71990169-71990188 None:intergenic 35.0%
TACACTTAAAAGCTTACAGG+TGG - Chr4:71989835-71989854 None:intergenic 35.0%
TAGTTCCTCCCATGAAAATA+AGG + Chr4:71990324-71990343 MsG0480022389.01.T01:intron 35.0%
TATGCTGATGATAGCTTCAA+TGG - Chr4:71986079-71986098 None:intergenic 35.0%
TATTATTTAGGCTTGTGCTG+TGG - Chr4:71989353-71989372 None:intergenic 35.0%
TCATGGATCCTAATAACTTC+TGG - Chr4:71988819-71988838 None:intergenic 35.0%
TCGTGTGTTTGAAGAAAGAA+TGG + Chr4:71989711-71989730 MsG0480022389.01.T01:CDS 35.0%
TCTGGAAATTTACGAGTCAA+TGG - Chr4:71986855-71986874 None:intergenic 35.0%
TGAGAAGCCTTACTTTAATG+AGG + Chr4:71990159-71990178 MsG0480022389.01.T01:CDS 35.0%
TGAGAATGTATATGGCAAGA+TGG + Chr4:71989294-71989313 MsG0480022389.01.T01:intron 35.0%
TGATCTTTGAACATAAGCGA+AGG - Chr4:71989907-71989926 None:intergenic 35.0%
TGGTGATATTATGTTCAAGG+CGG + Chr4:71987616-71987635 MsG0480022389.01.T01:CDS 35.0%
TGTGACAGGCATATAATTGA+TGG + Chr4:71986383-71986402 MsG0480022389.01.T01:intron 35.0%
TTATATTGGGCACATGCATT+TGG - Chr4:71988486-71988505 None:intergenic 35.0%
TTCCAGCACCATTGTTTATA+AGG + Chr4:71989880-71989899 MsG0480022389.01.T01:intron 35.0%
TTCCCTCATCAAAAAAATGG+TGG - Chr4:71988926-71988945 None:intergenic 35.0%
TTGAATGATCCTACTGAACT+TGG + Chr4:71987979-71987998 MsG0480022389.01.T01:intron 35.0%
TTGCCACAAAATGTCAACTT+TGG - Chr4:71987300-71987319 None:intergenic 35.0%
TTTCGGATTGATAAACACGA+AGG + Chr4:71988121-71988140 MsG0480022389.01.T01:CDS 35.0%
! AGACCAAAGTTGACATTTTG+TGG + Chr4:71987294-71987313 MsG0480022389.01.T01:CDS 35.0%
! AGCATACTGTAAAGGTACAA+TGG + Chr4:71987489-71987508 MsG0480022389.01.T01:CDS 35.0%
! ATGCTTCAATTTGCTTGAGA+AGG + Chr4:71986130-71986149 MsG0480022389.01.T01:five_prime_UTR 35.0%
! CATTTCAAATTTAGGCACTG+AGG - Chr4:71988688-71988707 None:intergenic 35.0%
! GTTGACATTTTGTGGCAAAA+TGG + Chr4:71987302-71987321 MsG0480022389.01.T01:CDS 35.0%
! TATGAGTAGTGATTCGGAAT+GGG + Chr4:71986410-71986429 MsG0480022389.01.T01:CDS 35.0%
! TCAAGTTTAGAGGAAAGCAT+TGG + Chr4:71986513-71986532 MsG0480022389.01.T01:CDS 35.0%
! TTCAGTTTTTCCACATCCAA+TGG - Chr4:71990493-71990512 None:intergenic 35.0%
! TTTTCCAGTACAAACTGATG+TGG - Chr4:71987398-71987417 None:intergenic 35.0%
!! AACTTTTGTTCATGGTGATG+TGG + Chr4:71986566-71986585 MsG0480022389.01.T01:CDS 35.0%
!! AATGTTCAGGACTTGTTAAG+TGG + Chr4:71988522-71988541 MsG0480022389.01.T01:intron 35.0%
!! CAAGTTTAGAGGAAAGCATT+GGG + Chr4:71986514-71986533 MsG0480022389.01.T01:CDS 35.0%
!! CTGTTGCTTTCTAAAGAAAG+CGG - Chr4:71988855-71988874 None:intergenic 35.0%
!! GACAAGTGTTGATTTGTTTG+TGG + Chr4:71986629-71986648 MsG0480022389.01.T01:CDS 35.0%
!! GGGCCATTTAAGATTTTATC+TGG + Chr4:71989541-71989560 MsG0480022389.01.T01:intron 35.0%
!! TGTTGATTTGTTTGTGGACT+TGG + Chr4:71986635-71986654 MsG0480022389.01.T01:CDS 35.0%
!!! CCAGATTACTCCTGTTTTTT+TGG + Chr4:71987596-71987615 MsG0480022389.01.T01:CDS 35.0%
!!! GACCACCATTTTTTTGATGA+GGG + Chr4:71988921-71988940 MsG0480022389.01.T01:CDS 35.0%
AACATCACGTTGACAACATC+AGG - Chr4:71989960-71989979 None:intergenic 40.0%
AAGAACAACCCGTCATGATA+CGG - Chr4:71989775-71989794 None:intergenic 40.0%
AAGCCTTACTTTAATGAGGC+TGG + Chr4:71990163-71990182 MsG0480022389.01.T01:CDS 40.0%
AATACGCAATGCAAGTTCCA+TGG - Chr4:71987948-71987967 None:intergenic 40.0%
ACAAAAGGCTTCTACAAGCT+TGG - Chr4:71990574-71990593 None:intergenic 40.0%
ACATAGATTTGGCTGTGACA+AGG - Chr4:71990255-71990274 None:intergenic 40.0%
ACATCACGTTGACAACATCA+GGG - Chr4:71989959-71989978 None:intergenic 40.0%
ACCTTCTGATAAGAAGGGAA+AGG + Chr4:71988192-71988211 MsG0480022389.01.T01:CDS 40.0%
ACCTTTCCCTTCTTATCAGA+AGG - Chr4:71988196-71988215 None:intergenic 40.0%
ACGTGATGTTTGAATGCAGA+TGG + Chr4:71989970-71989989 MsG0480022389.01.T01:intron 40.0%
ACTCATAGTAAGACTTCGTG+TGG - Chr4:71987195-71987214 None:intergenic 40.0%
AGCATATTCCAAACACTTGG+TGG + Chr4:71988639-71988658 MsG0480022389.01.T01:CDS 40.0%
ATGTATATGGCAAGATGGCA+TGG + Chr4:71989299-71989318 MsG0480022389.01.T01:intron 40.0%
ATGTATGCATGTTTGTACCG+AGG + Chr4:71989520-71989539 MsG0480022389.01.T01:intron 40.0%
ATTATGTAACTAAGGGGCCA+TGG + Chr4:71986733-71986752 MsG0480022389.01.T01:CDS 40.0%
CAACAAATAGGTAGAGCTGA+GGG + Chr4:71990193-71990212 MsG0480022389.01.T01:CDS 40.0%
CAATAACGACTGCTACAGAA+AGG - Chr4:71989177-71989196 None:intergenic 40.0%
CAGAAAATCATGGCATACCT+TGG - Chr4:71987843-71987862 None:intergenic 40.0%
CAGACATAGAAATCTCAGCT+TGG + Chr4:71988308-71988327 MsG0480022389.01.T01:intron 40.0%
CAGAGGCTGCTCTTAAAAAT+GGG + Chr4:71987702-71987721 MsG0480022389.01.T01:CDS 40.0%
CATGTCCAAACCGAATAGTT+TGG + Chr4:71987523-71987542 MsG0480022389.01.T01:CDS 40.0%
CCCCAATACAAGAGTTAACA+AGG - Chr4:71987250-71987269 None:intergenic 40.0%
CGGACAAACTTTCGAAGATT+CGG + Chr4:71986694-71986713 MsG0480022389.01.T01:CDS 40.0%
CTCATAGTAAGACTTCGTGT+GGG - Chr4:71987194-71987213 None:intergenic 40.0%
CTGAACATGAAAACCAGAAG+GGG + Chr4:71990508-71990527 MsG0480022389.01.T01:CDS 40.0%
GCGGAAAATCATTCTTGTCA+TGG - Chr4:71988836-71988855 None:intergenic 40.0%
GCTGGTTATGACCAACAAAT+AGG + Chr4:71990181-71990200 MsG0480022389.01.T01:CDS 40.0%
GGATGCTATGAGTAGTGATT+CGG + Chr4:71986404-71986423 MsG0480022389.01.T01:CDS 40.0%
TAAGCCTGGCAGTAAAAGAT+GGG + Chr4:71987439-71987458 MsG0480022389.01.T01:CDS 40.0%
TACAACGCTTCTAAATCAGC+AGG + Chr4:71986924-71986943 MsG0480022389.01.T01:CDS 40.0%
TAGCTCTCATTCACTGTACT+TGG + Chr4:71986289-71986308 MsG0480022389.01.T01:intron 40.0%
TAGTTTGGATGGAGACGAAA+TGG + Chr4:71987538-71987557 MsG0480022389.01.T01:CDS 40.0%
TCAAGTTCTTCTCTCTCTAC+AGG + Chr4:71990123-71990142 MsG0480022389.01.T01:CDS 40.0%
TCCAAACCGAATAGTTTGGA+TGG + Chr4:71987527-71987546 MsG0480022389.01.T01:CDS 40.0%
TCCAGCATATTCCAAACACT+TGG + Chr4:71988636-71988655 MsG0480022389.01.T01:CDS 40.0%
TCCAGTTGCACCAACAATTA+CGG - Chr4:71989749-71989768 None:intergenic 40.0%
TCCATCCAAACTATTCGGTT+TGG - Chr4:71987531-71987550 None:intergenic 40.0%
TCGTCTCCATCCAAACTATT+CGG - Chr4:71987536-71987555 None:intergenic 40.0%
TGAGGAAAATGCTCCTGAAA+TGG - Chr4:71988670-71988689 None:intergenic 40.0%
TGGAGAGACAATCAAGATGA+AGG + Chr4:71986963-71986982 MsG0480022389.01.T01:CDS 40.0%
TGTATGCATGTTTGTACCGA+GGG + Chr4:71989521-71989540 MsG0480022389.01.T01:intron 40.0%
TTAAGCCTGGCAGTAAAAGA+TGG + Chr4:71987438-71987457 MsG0480022389.01.T01:CDS 40.0%
TTCGGATAGCAATTTGACTG+TGG + Chr4:71987043-71987062 MsG0480022389.01.T01:CDS 40.0%
TTTCCTCTCTATTGTTGCGT+CGG + Chr4:71986317-71986336 MsG0480022389.01.T01:intron 40.0%
! AAGATTCGGTCCATTTCAGA+AGG + Chr4:71986708-71986727 MsG0480022389.01.T01:CDS 40.0%
! ACCAAGTGTTTGGAATATGC+TGG - Chr4:71988640-71988659 None:intergenic 40.0%
! ATGTCTGATGCAGCATTTTG+AGG + Chr4:71990392-71990411 MsG0480022389.01.T01:intron 40.0%
! CTATGAGTAGTGATTCGGAA+TGG + Chr4:71986409-71986428 MsG0480022389.01.T01:CDS 40.0%
! GCGCTCCAAACATATACTTT+TGG + Chr4:71990440-71990459 MsG0480022389.01.T01:CDS 40.0%
! GTAGAAGCCTTTTGTGACAA+GGG + Chr4:71990579-71990598 MsG0480022389.01.T01:CDS 40.0%
! TGGTTTCAAAGATGGTGATG+TGG + Chr4:71987790-71987809 MsG0480022389.01.T01:CDS 40.0%
! TGTAGAAGCCTTTTGTGACA+AGG + Chr4:71990578-71990597 MsG0480022389.01.T01:CDS 40.0%
! TGTGGTAATTTTACCTTGGG+TGG - Chr4:71990295-71990314 None:intergenic 40.0%
! TTTCAAAGATGGTGATGTGG+AGG + Chr4:71987793-71987812 MsG0480022389.01.T01:CDS 40.0%
!! CAAACTATTCGGTTTGGACA+TGG - Chr4:71987525-71987544 None:intergenic 40.0%
!! CAAGTTTGGTGTGTGTTAAC+TGG + Chr4:71987006-71987025 MsG0480022389.01.T01:CDS 40.0%
!! TATCTTGAAGGTGCTTCCAT+TGG + Chr4:71990474-71990493 MsG0480022389.01.T01:CDS 40.0%
!! TGCTGATTTAGAAGCGTTGT+AGG - Chr4:71986925-71986944 None:intergenic 40.0%
!!! GGACCACCATTTTTTTGATG+AGG + Chr4:71988920-71988939 MsG0480022389.01.T01:CDS 40.0%
!!! TTTTTGGAATCTTGCCAGCA+TGG - Chr4:71987077-71987096 None:intergenic 40.0%
AAATCAGCAGGATGGCTATG+TGG + Chr4:71986936-71986955 MsG0480022389.01.T01:CDS 45.0%
AAGCCTGGCAGTAAAAGATG+GGG + Chr4:71987440-71987459 MsG0480022389.01.T01:CDS 45.0%
AAGCTTACAGGTGGTTCGTT+AGG - Chr4:71989826-71989845 None:intergenic 45.0%
AAGGCGGCTCAAAAACAGTT+TGG + Chr4:71987632-71987651 MsG0480022389.01.T01:CDS 45.0%
AATCATCTCTTGAGGAGCAG+GGG - Chr4:71988158-71988177 None:intergenic 45.0%
ACGCTTCTAAATCAGCAGGA+TGG + Chr4:71986928-71986947 MsG0480022389.01.T01:CDS 45.0%
ACTGGAACTCCGTATCATGA+CGG + Chr4:71989763-71989782 MsG0480022389.01.T01:CDS 45.0%
ATCCTTGAGAGAAGTCTTCC+GGG + Chr4:71989082-71989101 MsG0480022389.01.T01:intron 45.0%
ATGGTGCACTACAATTCTGG+CGG + Chr4:71989989-71990008 MsG0480022389.01.T01:CDS 45.0%
ATTACATGAGTCACCGTCAC+CGG + Chr4:71989226-71989245 MsG0480022389.01.T01:intron 45.0%
CAATCATCTCTTGAGGAGCA+GGG - Chr4:71988159-71988178 None:intergenic 45.0%
CAGATGGTGCACTACAATTC+TGG + Chr4:71989986-71990005 MsG0480022389.01.T01:intron 45.0%
CATCCTTGAGAGAAGTCTTC+CGG + Chr4:71989081-71989100 MsG0480022389.01.T01:intron 45.0%
CCAACAAATAGGTAGAGCTG+AGG + Chr4:71990192-71990211 MsG0480022389.01.T01:CDS 45.0%
CCTCAAGAGATGATTGAACG+CGG + Chr4:71988163-71988182 MsG0480022389.01.T01:CDS 45.0%
CCTCAGCTCTACCTATTTGT+TGG - Chr4:71990195-71990214 None:intergenic 45.0%
CTGCATTGAACCACATCCAA+CGG + Chr4:71988758-71988777 MsG0480022389.01.T01:CDS 45.0%
CTTGGTGGAACTTCCATTTC+AGG + Chr4:71988654-71988673 MsG0480022389.01.T01:CDS 45.0%
GCAGAGGCTGCTCTTAAAAA+TGG + Chr4:71987701-71987720 MsG0480022389.01.T01:CDS 45.0%
GGGTAATGACATGAATGCAG+AGG + Chr4:71987685-71987704 MsG0480022389.01.T01:CDS 45.0%
GTAGATTGCAACTCATCCGT+TGG - Chr4:71988777-71988796 None:intergenic 45.0%
GTTGAACAGTCTGTTCCTCT+TGG - Chr4:71987166-71987185 None:intergenic 45.0%
TATGGACACTGCGAATCTTC+TGG - Chr4:71986873-71986892 None:intergenic 45.0%
TCAATCATCTCTTGAGGAGC+AGG - Chr4:71988160-71988179 None:intergenic 45.0%
TCAGATCCAAGTGGACAGAA+GGG + Chr4:71986600-71986619 MsG0480022389.01.T01:CDS 45.0%
TCTATTACGAAAGCCACCCA+AGG + Chr4:71990279-71990298 MsG0480022389.01.T01:CDS 45.0%
TCTTACGATCCTCTTAAGCC+TGG + Chr4:71987425-71987444 MsG0480022389.01.T01:CDS 45.0%
TGCTACAGAAAGGCTTCTCA+TGG - Chr4:71989167-71989186 None:intergenic 45.0%
TGGAAGTTCCACCAAGTGTT+TGG - Chr4:71988650-71988669 None:intergenic 45.0%
TTAACCTTTACTCTCTGCCC+TGG - Chr4:71986900-71986919 None:intergenic 45.0%
TTCACTGGGAGTAAACTCTC+TGG - Chr4:71987350-71987369 None:intergenic 45.0%
TTCATAAGGCGGAACCTGTT+TGG - Chr4:71988098-71988117 None:intergenic 45.0%
TTGCAGCTCAACAAACTGAC+TGG - Chr4:71990613-71990632 None:intergenic 45.0%
TTGGCCACATCAGTTTGTAC+TGG + Chr4:71987391-71987410 MsG0480022389.01.T01:CDS 45.0%
TTGTGCTGTCGATGCAAGTT+TGG + Chr4:71986992-71987011 MsG0480022389.01.T01:CDS 45.0%
TTTGGATGGAGACGAAATGG+AGG + Chr4:71987541-71987560 MsG0480022389.01.T01:CDS 45.0%
! ACAAGAGGGTGTAAGAGTCA+GGG + Chr4:71987218-71987237 MsG0480022389.01.T01:CDS 45.0%
! CTTTTACTGCCAGGCTTAAG+AGG - Chr4:71987437-71987456 None:intergenic 45.0%
! GCGAAGGGCCTTATAAACAA+TGG - Chr4:71989891-71989910 None:intergenic 45.0%
! GGCCTTATAAACAATGGTGC+TGG - Chr4:71989885-71989904 None:intergenic 45.0%
! GTGTGAAAAGCACGACAACA+CGG - Chr4:71987105-71987124 None:intergenic 45.0%
! TGAAGAATAGTGGAGGTTCC+AGG - Chr4:71990106-71990125 None:intergenic 45.0%
! TGCGAAGGAGCATACTGTAA+AGG + Chr4:71987481-71987500 MsG0480022389.01.T01:CDS 45.0%
! TGGTGATGTGGAGGTGAAAT+TGG + Chr4:71987802-71987821 MsG0480022389.01.T01:CDS 45.0%
! TTCCTTTTTCCTTCCTCGAG+CGG + Chr4:71988587-71988606 MsG0480022389.01.T01:CDS 45.0%
!! CAGGACTTGTTAAGTGGTGA+TGG + Chr4:71988528-71988547 MsG0480022389.01.T01:intron 45.0%
AAAAGTTCAAAGGCCGCTCG+AGG - Chr4:71988603-71988622 None:intergenic 50.0%
ACTCTCTGCCCTGGATAGTA+TGG - Chr4:71986891-71986910 None:intergenic 50.0%
AGCGCAGGTAACAGTCATCA+GGG - Chr4:71987754-71987773 None:intergenic 50.0%
ATCCAAGTGGACAGAAGGGA+AGG + Chr4:71986604-71986623 MsG0480022389.01.T01:CDS 50.0%
ATGCCGACGCAACAATAGAG+AGG - Chr4:71986323-71986342 None:intergenic 50.0%
CAGGATGGCTATGTGGAACT+TGG + Chr4:71986943-71986962 MsG0480022389.01.T01:CDS 50.0%
CCGCGTTCAATCATCTCTTG+AGG - Chr4:71988166-71988185 None:intergenic 50.0%
CGCAGTGTCCATACTATCCA+GGG + Chr4:71986880-71986899 MsG0480022389.01.T01:CDS 50.0%
CTAAATACTTGGACAGGCGC+AGG + Chr4:71990064-71990083 MsG0480022389.01.T01:CDS 50.0%
CTATCCAGGGCAGAGAGTAA+AGG + Chr4:71986893-71986912 MsG0480022389.01.T01:CDS 50.0%
CTCATGCGAGCCGTAATTGT+TGG + Chr4:71989736-71989755 MsG0480022389.01.T01:CDS 50.0%
CTGCGCCTGTCCAAGTATTT+AGG - Chr4:71990066-71990085 None:intergenic 50.0%
CTGGAACTCCGTATCATGAC+GGG + Chr4:71989764-71989783 MsG0480022389.01.T01:CDS 50.0%
CTGTCCACTTGGATCTGACA+CGG - Chr4:71986598-71986617 None:intergenic 50.0%
GCCGTAATTGTTGGTGCAAC+TGG + Chr4:71989745-71989764 MsG0480022389.01.T01:CDS 50.0%
GGTGGTTCGTTAGGATACTC+CGG - Chr4:71989817-71989836 None:intergenic 50.0%
GTCAGATCCAAGTGGACAGA+AGG + Chr4:71986599-71986618 MsG0480022389.01.T01:CDS 50.0%
GTGGAGGTGAAATTGGCTAC+TGG + Chr4:71987809-71987828 MsG0480022389.01.T01:CDS 50.0%
GTTCGTTAGGATACTCCGGA+GGG - Chr4:71989813-71989832 None:intergenic 50.0%
TACCCGGAAGACTTCTCTCA+AGG - Chr4:71989087-71989106 None:intergenic 50.0%
TCCAAGTGGACAGAAGGGAA+GGG + Chr4:71986605-71986624 MsG0480022389.01.T01:CDS 50.0%
TCGCAGTGTCCATACTATCC+AGG + Chr4:71986879-71986898 MsG0480022389.01.T01:CDS 50.0%
TGCAACTCATCCGTTGGATG+TGG - Chr4:71988771-71988790 None:intergenic 50.0%
TGGCGCAATCCAAGTTCAGT+AGG - Chr4:71987991-71988010 None:intergenic 50.0%
TGGGTGCTCAACTAGTTCGT+AGG - Chr4:71987579-71987598 None:intergenic 50.0%
TGGTGCACTACAATTCTGGC+GGG + Chr4:71989990-71990009 MsG0480022389.01.T01:CDS 50.0%
TGTCCAATGTGTGGATGCGA+AGG + Chr4:71987466-71987485 MsG0480022389.01.T01:CDS 50.0%
TTAGGCTTGTGCTGTGGCAA+TGG - Chr4:71989347-71989366 None:intergenic 50.0%
TTGGAATCTTGCCAGCATGG+TGG - Chr4:71987074-71987093 None:intergenic 50.0%
! AAAAGCACGACAACACGGTC+AGG - Chr4:71987100-71987119 None:intergenic 50.0%
! ACACCCCATCTTTTACTGCC+AGG - Chr4:71987446-71987465 None:intergenic 50.0%
! CGACAACACGGTCAGGTTTT+TGG - Chr4:71987093-71987112 None:intergenic 50.0%
! CGCTGTGTTGGCACTGTTAT+TGG + Chr4:71987770-71987789 MsG0480022389.01.T01:CDS 50.0%
! CGTGCTTTTCACACGCAAAC+TGG + Chr4:71987111-71987130 MsG0480022389.01.T01:CDS 50.0%
! CTGGCTCGCTTCTGTTCTTT+CGG + Chr4:71987025-71987044 MsG0480022389.01.T01:CDS 50.0%
! GACAAGAGGGTGTAAGAGTC+AGG + Chr4:71987217-71987236 MsG0480022389.01.T01:CDS 50.0%
!! ATGGGGTGTTGTCCAATGTG+TGG + Chr4:71987457-71987476 MsG0480022389.01.T01:CDS 50.0%
!! GAAGGTGCTTCCATTGGATG+TGG + Chr4:71990480-71990499 MsG0480022389.01.T01:CDS 50.0%
!! GGCTACTGGTTTCACAACCA+AGG + Chr4:71987823-71987842 MsG0480022389.01.T01:CDS 50.0%
!!! GATGCAGCATTTTGAGGCAC+TGG + Chr4:71990398-71990417 MsG0480022389.01.T01:intron 50.0%
AACCAGAAGGGGACTTCTGC+AGG + Chr4:71990519-71990538 MsG0480022389.01.T01:CDS 55.0%
ACCCTTCCCTTCTGTCCACT+TGG - Chr4:71986609-71986628 None:intergenic 55.0%
ATCCTGCAGAAGTCCCCTTC+TGG - Chr4:71990524-71990543 None:intergenic 55.0%
CAGCGCAGGTAACAGTCATC+AGG - Chr4:71987755-71987774 None:intergenic 55.0%
CAGTGACAGCAGCAGTAGTG+AGG + Chr4:71986440-71986459 MsG0480022389.01.T01:CDS 55.0%
CTCACTACTGCTGCTGTCAC+TGG - Chr4:71986442-71986461 None:intergenic 55.0%
GACTGTTACCTGCGCTGTGT+TGG + Chr4:71987758-71987777 MsG0480022389.01.T01:CDS 55.0%
GCTCCTTCGCATCCACACAT+TGG - Chr4:71987472-71987491 None:intergenic 55.0%
GGTTCGTTAGGATACTCCGG+AGG - Chr4:71989814-71989833 None:intergenic 55.0%
GTAACTAAGGGGCCATGGCT+CGG + Chr4:71986738-71986757 MsG0480022389.01.T01:CDS 55.0%
GTGCATGGTTGCAGACCAAG+AGG + Chr4:71987148-71987167 MsG0480022389.01.T01:CDS 55.0%
TAACAGTGCCAACACAGCGC+AGG - Chr4:71987769-71987788 None:intergenic 55.0%
TCACACGCAAACTGGCAGCT+TGG + Chr4:71987119-71987138 MsG0480022389.01.T01:CDS 55.0%
TGCTCCGTGTCAGATCCAAG+TGG + Chr4:71986591-71986610 MsG0480022389.01.T01:CDS 55.0%
! CAAACTGGCAGCTTGGTGAC+TGG + Chr4:71987126-71987145 MsG0480022389.01.T01:CDS 55.0%
!! GGCTCTGAAGTGTGGAATCC+TGG + Chr4:71990085-71990104 MsG0480022389.01.T01:CDS 55.0%
!!! GCAGCATTTTGAGGCACTGG+TGG + Chr4:71990401-71990420 MsG0480022389.01.T01:intron 55.0%
AGTCACCGTCACCGGAGACA+CGG + Chr4:71989234-71989253 MsG0480022389.01.T01:intron 60.0%
CTGTGGATGCTCCACCATGC+TGG + Chr4:71987060-71987079 MsG0480022389.01.T01:CDS 60.0%
GGCCGCTCGAGGAAGGAAAA+AGG - Chr4:71988592-71988611 None:intergenic 60.0%
GGCTAAGAGACCCGTGTCTC+CGG - Chr4:71989248-71989267 None:intergenic 60.0%
GTTCAAAGGCCGCTCGAGGA+AGG - Chr4:71988599-71988618 None:intergenic 60.0%
! GCAGCTTGGTGACTGGTGCA+TGG + Chr4:71987133-71987152 MsG0480022389.01.T01:CDS 60.0%
!! ATGGCTCGGTCGGGCTCAAA+GGG + Chr4:71986752-71986771 MsG0480022389.01.T01:CDS 60.0%
CGGTCGGGCTCAAAGGGTTG+TGG + Chr4:71986758-71986777 MsG0480022389.01.T01:CDS 65.0%
CTTTGAGCCCGACCGAGCCA+TGG - Chr4:71986753-71986772 None:intergenic 65.0%
GAGACCCGTGTCTCCGGTGA+CGG - Chr4:71989242-71989261 None:intergenic 65.0%
GTCACCGTCACCGGAGACAC+GGG + Chr4:71989235-71989254 MsG0480022389.01.T01:intron 65.0%
!! CAGGCGCAGGCTCTGAAGTG+TGG + Chr4:71990077-71990096 MsG0480022389.01.T01:CDS 65.0%
!! CATGGCTCGGTCGGGCTCAA+AGG + Chr4:71986751-71986770 MsG0480022389.01.T01:CDS 65.0%
!! CTAAGGGGCCATGGCTCGGT+CGG + Chr4:71986742-71986761 MsG0480022389.01.T01:CDS 65.0%
!! TAAGGGGCCATGGCTCGGTC+GGG + Chr4:71986743-71986762 MsG0480022389.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 71986063 71990893 71986063 ID=MsG0480022389.01;Name=MsG0480022389.01
Chr4 mRNA 71986063 71990893 71986063 ID=MsG0480022389.01.T01;Parent=MsG0480022389.01;Name=MsG0480022389.01.T01;_AED=0.48;_eAED=0.48;_QI=100|0.83|0.85|1|0.83|0.71|7|255|897
Chr4 exon 71986063 71986151 71986063 ID=MsG0480022389.01.T01:exon:4918;Parent=MsG0480022389.01.T01
Chr4 exon 71986391 71987844 71986391 ID=MsG0480022389.01.T01:exon:4919;Parent=MsG0480022389.01.T01
Chr4 exon 71988103 71988213 71988103 ID=MsG0480022389.01.T01:exon:4920;Parent=MsG0480022389.01.T01
Chr4 exon 71988531 71988965 71988531 ID=MsG0480022389.01.T01:exon:4921;Parent=MsG0480022389.01.T01
Chr4 exon 71989679 71989837 71989679 ID=MsG0480022389.01.T01:exon:4922;Parent=MsG0480022389.01.T01
Chr4 exon 71989989 71990300 71989989 ID=MsG0480022389.01.T01:exon:4923;Parent=MsG0480022389.01.T01
Chr4 exon 71990405 71990893 71990405 ID=MsG0480022389.01.T01:exon:4924;Parent=MsG0480022389.01.T01
Chr4 five_prime_UTR 71986063 71986151 71986063 ID=MsG0480022389.01.T01:five_prime_utr;Parent=MsG0480022389.01.T01
Chr4 five_prime_UTR 71986391 71986401 71986391 ID=MsG0480022389.01.T01:five_prime_utr;Parent=MsG0480022389.01.T01
Chr4 CDS 71986402 71987844 71986402 ID=MsG0480022389.01.T01:cds;Parent=MsG0480022389.01.T01
Chr4 CDS 71988103 71988213 71988103 ID=MsG0480022389.01.T01:cds;Parent=MsG0480022389.01.T01
Chr4 CDS 71988531 71988965 71988531 ID=MsG0480022389.01.T01:cds;Parent=MsG0480022389.01.T01
Chr4 CDS 71989679 71989837 71989679 ID=MsG0480022389.01.T01:cds;Parent=MsG0480022389.01.T01
Chr4 CDS 71989989 71990300 71989989 ID=MsG0480022389.01.T01:cds;Parent=MsG0480022389.01.T01
Chr4 CDS 71990405 71990638 71990405 ID=MsG0480022389.01.T01:cds;Parent=MsG0480022389.01.T01
Chr4 three_prime_UTR 71990639 71990893 71990639 ID=MsG0480022389.01.T01:three_prime_utr;Parent=MsG0480022389.01.T01
Gene Sequence

>MsG0480022389.01.T01

ATGGATGCTATGAGTAGTGATTCGGAATGGGAGAGTTCCAGTGACAGCAGCAGTAGTGAGGATCAAGAAGAAATTGATTTTCAATATGGTGGTCAAGCTCAGAGCATATTATCAAGTTTAGAGGAAAGCATTGGGAAGATTGATGATTTTCTCTCATTTGAGAGAACTTTTGTTCATGGTGATGTGGTCTGCTCCGTGTCAGATCCAAGTGGACAGAAGGGAAGGGTGACAAGTGTTGATTTGTTTGTGGACTTGGAAAATGTTAAAGGAAAGGTATTAAAAAATGTAAACTCGGACAAACTTTCGAAGATTCGGTCCATTTCAGAAGGTGATTATGTAACTAAGGGGCCATGGCTCGGTCGGGCTCAAAGGGTTGTGGACAAAGTTACTGTATTGTTTGACGATGGAGCTAAATCCGATATCATTGCCTTAGAAAGAGAAAAGGTTTTACCATTGACTCGTAAATTTCCAGAAGATTCGCAGTGTCCATACTATCCAGGGCAGAGAGTAAAGGTTAAGTCCTACAACGCTTCTAAATCAGCAGGATGGCTATGTGGAACTTGGAGAGACAATCAAGATGAAGGAACTGTTTGTGCTGTCGATGCAAGTTTGGTGTGTGTTAACTGGCTCGCTTCTGTTCTTTCGGATAGCAATTTGACTGTGGATGCTCCACCATGCTGGCAAGATTCCAAAAACCTGACCGTGTTGTCGTGCTTTTCACACGCAAACTGGCAGCTTGGTGACTGGTGCATGGTTGCAGACCAAGAGGAACAGACTGTTCAACATGCACCCACACGAAGTCTTACTATGAGTATGACAAGAGGGTGTAAGAGTCAGGGAAGAAACCTTGTTAACTCTTGTATTGGGGAATTTTTTATAATTGGGAAGATAAAGACCAAAGTTGACATTTTGTGGCAAAATGGTGAACATAGTTTGGGATTAAATCCAGAGAGTTTACTCCCAGTGAATGTTATAAACACACATGAATTTTGGCCACATCAGTTTGTACTGGAAAAAGGTGTTTCTTACGATCCTCTTAAGCCTGGCAGTAAAAGATGGGGTGTTGTCCAATGTGTGGATGCGAAGGAGCATACTGTAAAGGTACAATGGCAAACTGTTTCCATGTCCAAACCGAATAGTTTGGATGGAGACGAAATGGAGGAAACTGTGAGTGCCTACGAACTAGTTGAGCACCCAGATTACTCCTGTTTTTTTGGTGATATTATGTTCAAGGCGGCTCAAAAACAGTTTGGTTACCAAGCTGATAAAGATACAGAAAAGTCGGGTAATGACATGAATGCAGAGGCTGCTCTTAAAAATGGGAACCAAATGAATTATCAAGATGACTTCCCTGATGACTGTTACCTGCGCTGTGTTGGCACTGTTATTGGTTTCAAAGATGGTGATGTGGAGGTGAAATTGGCTACTGGTTTCACAACCAAGGTTCCGCCTTATGAAATTTTTCGGATTGATAAACACGAAGGTGCAACTGTAACCCCTGCTCCTCAAGAGATGATTGAACGCGGAAGTCTACCTTCTGATAAGAAGGGAAAGGACTTGTTAAGTGGTGATGGTAGAAAAGAGAATTTGGAACAGAATCTTGAGTGTAGTTCCTTTTTCCTTCCTCGAGCGGCCTTTGAACTTTTTTCCAGTATTAAATCCAGCATATTCCAAACACTTGGTGGAACTTCCATTTCAGGAGCATTTTCCTCAGTGCCTAAATTTGAAATGGATAACGAATCAGATTATCCTGATAAGAAAGATTTGGAAACTTGTAATTTCTGCATTGAACCACATCCAACGGATGAGTTGCAATCTACTGAAGACAGAACTTCATATCCAGAAGTTATTAGGATCCATGACAAGAATGATTTTCCGCTTTCTTTAGAAAGCAACAGTTCAAACCAGTTTAAGCAGTTTGATGTTATAGAAAGTTGTTCTGAGGACCACCATTTTTTTGATGAGGGAAAAGAATTGTCAACATTGCAGTCTCTATTGACCCAAACAGACTCTATTTATGTTCGTGTGTTTGAAGAAAGAATGGATCTCATGCGAGCCGTAATTGTTGGTGCAACTGGAACTCCGTATCATGACGGGTTGTTCTTCTTTGATATATGTTTCCCTCCGGAGTATCCTAACGAACCACCTATGGTGCACTACAATTCTGGCGGGCTCCGCTTAAATCCTAATTTATATGAATCAGGGAAAATCTGTCTGAGTCTCCTAAATACTTGGACAGGCGCAGGCTCTGAAGTGTGGAATCCTGGAACCTCCACTATTCTTCAAGTTCTTCTCTCTCTACAGGCTCTTGTCCTTAATGAGAAGCCTTACTTTAATGAGGCTGGTTATGACCAACAAATAGGTAGAGCTGAGGGAGAGAAAAATTCTGTGAGCTATAATGAGAATGCTTTCCTTGTCACAGCCAAATCTATGTTGTATCTATTACGAAAGCCACCCAAGCATTTTGAGGCACTGGTGGAAGAGCACTTCGAAAAGCGCTCCAAACATATACTTTTGGCTTGTAAAGCATATCTTGAAGGTGCTTCCATTGGATGTGGAAAAACTGAACATGAAAACCAGAAGGGGACTTCTGCAGGATTTAAAATAATGCTTGCTAAGCTCTTCTCCAAGCTTGTAGAAGCCTTTTGTGACAAGGGAATTGATTCCAGTCAGTTTGTTGAGCTGCAAGAATAA
Protein sequence

>MsG0480022389.01.T01

MDAMSSDSEWESSSDSSSSEDQEEIDFQYGGQAQSILSSLEESIGKIDDFLSFERTFVHGDVVCSVSDPSGQKGRVTSVDLFVDLENVKGKVLKNVNSDKLSKIRSISEGDYVTKGPWLGRAQRVVDKVTVLFDDGAKSDIIALEREKVLPLTRKFPEDSQCPYYPGQRVKVKSYNASKSAGWLCGTWRDNQDEGTVCAVDASLVCVNWLASVLSDSNLTVDAPPCWQDSKNLTVLSCFSHANWQLGDWCMVADQEEQTVQHAPTRSLTMSMTRGCKSQGRNLVNSCIGEFFIIGKIKTKVDILWQNGEHSLGLNPESLLPVNVINTHEFWPHQFVLEKGVSYDPLKPGSKRWGVVQCVDAKEHTVKVQWQTVSMSKPNSLDGDEMEETVSAYELVEHPDYSCFFGDIMFKAAQKQFGYQADKDTEKSGNDMNAEAALKNGNQMNYQDDFPDDCYLRCVGTVIGFKDGDVEVKLATGFTTKVPPYEIFRIDKHEGATVTPAPQEMIERGSLPSDKKGKDLLSGDGRKENLEQNLECSSFFLPRAAFELFSSIKSSIFQTLGGTSISGAFSSVPKFEMDNESDYPDKKDLETCNFCIEPHPTDELQSTEDRTSYPEVIRIHDKNDFPLSLESNSSNQFKQFDVIESCSEDHHFFDEGKELSTLQSLLTQTDSIYVRVFEERMDLMRAVIVGATGTPYHDGLFFFDICFPPEYPNEPPMVHYNSGGLRLNPNLYESGKICLSLLNTWTGAGSEVWNPGTSTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLVTAKSMLYLLRKPPKHFEALVEEHFEKRSKHILLACKAYLEGASIGCGKTEHENQKGTSAGFKIMLAKLFSKLVEAFCDKGIDSSQFVELQE*