Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023225.01.T01 | XP_013446720.1 | 95.045 | 222 | 9 | 2 | 1 | 221 | 1 | 221 | 7.87E-130 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023225.01.T01 | A0A072TTI8 | 95.045 | 222 | 9 | 2 | 1 | 221 | 1 | 221 | 3.76e-130 | 382 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000984.01 | MsG0480023225.01 | 0.829949 | 3.865843e-55 | 4.015803e-52 |
| MsG0180005678.01 | MsG0480023225.01 | 0.828723 | 7.673236e-55 | 7.689733e-52 |
| MsG0480023225.01 | MsG0880043920.01 | 0.814496 | 1.495919e-51 | 1.005361e-48 |
| MsG0280006924.01 | MsG0480023225.01 | 0.836113 | 1.131514e-56 | 1.412149e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023225.01.T01 | MTR_8g089695 | 95.045 | 222 | 9 | 2 | 1 | 221 | 1 | 221 | 9.53e-134 | 382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 93 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGCTTGTGTGTAATATT+TGG | 0.217944 | 4:-82347576 | MsG0480023225.01.T01:CDS |
| AGCGGCGTCACGGTGGTATA+AGG | 0.313470 | 4:-82347641 | MsG0480023225.01.T01:CDS |
| CAAGCACCCATCCAAGTTAA+AGG | 0.323626 | 4:+82347594 | None:intergenic |
| TCATGTGGCACTATTGAAAT+TGG | 0.362266 | 4:+82348146 | None:intergenic |
| TTGGTGTGGCACTGTTGGAA+TGG | 0.370173 | 4:+82348061 | None:intergenic |
| GTCAATTGCCGCCGAGGCTC+AGG | 0.383069 | 4:+82347675 | None:intergenic |
| ATCACCACCTTTAACTTGGA+TGG | 0.405100 | 4:-82347601 | MsG0480023225.01.T01:CDS |
| TGGTGTTGGTGTGGCACTAT+TGG | 0.427105 | 4:+82348014 | None:intergenic |
| TGGTGTGGCACTGTTGGAAT+TGG | 0.428517 | 4:+82348104 | None:intergenic |
| TGGTGTGGCACTGTTGGAAT+GGG | 0.428970 | 4:+82348062 | None:intergenic |
| TGGCAATGGAAAATGAGGTT+GGG | 0.430712 | 4:+82347935 | None:intergenic |
| CGAGGCTCAGGAGGGTGATC+AGG | 0.441754 | 4:+82347687 | None:intergenic |
| GGAGGGTGATCAGGCGGTGG+TGG | 0.455552 | 4:+82347696 | None:intergenic |
| GCACTGTTGGAATGGGTGGT+TGG | 0.460430 | 4:+82348069 | None:intergenic |
| GGGTGTTGGTGTGGCACTGT+TGG | 0.461916 | 4:+82348056 | None:intergenic |
| GACCTTCTTGCTCAAGGTGA+AGG | 0.467274 | 4:+82347862 | None:intergenic |
| TGTGGCACTGTTGGAATTGG+TGG | 0.470055 | 4:+82348107 | None:intergenic |
| CCCCTTCACCTTGAGCAAGA+AGG | 0.470910 | 4:-82347864 | MsG0480023225.01.T01:CDS |
| AAATTTACCCTTGACTTGCC+TGG | 0.477026 | 4:+82347738 | None:intergenic |
| GTGGTTGGCCACGAGGGTGT+TGG | 0.477135 | 4:+82348084 | None:intergenic |
| GCGAGCCTCCACGCGGTGGT+TGG | 0.482523 | 4:+82347790 | None:intergenic |
| TGATGAGATACATCTTGTAT+AGG | 0.484187 | 4:+82347960 | None:intergenic |
| CACGCGGTGGTTGGCTGATG+CGG | 0.484904 | 4:+82347799 | None:intergenic |
| AATTGCCGCCGAGGCTCAGG+AGG | 0.490348 | 4:+82347678 | None:intergenic |
| TGGAATGGAAGGTTGGCCAC+GGG | 0.495894 | 4:+82348034 | None:intergenic |
| CGAGATCAAGATCTTCGGCC+AGG | 0.500871 | 4:-82347756 | MsG0480023225.01.T01:CDS |
| AGCATCGAGATCAAGATCTT+CGG | 0.504615 | 4:-82347761 | MsG0480023225.01.T01:CDS |
| TTGCGTGGAACTTGTAAACT+AGG | 0.506006 | 4:+82347828 | None:intergenic |
| GGCAATGGAAAATGAGGTTG+GGG | 0.508903 | 4:+82347936 | None:intergenic |
| TCAGGAGGGTGATCAGGCGG+TGG | 0.509407 | 4:+82347693 | None:intergenic |
| GGTGATGACCTTCTTGCTCA+AGG | 0.512097 | 4:+82347856 | None:intergenic |
| TTGGAATTGGTGGTTGGCCA+CGG | 0.514076 | 4:+82348117 | None:intergenic |
| GTGGCAATGGAAAATGAGGT+TGG | 0.518157 | 4:+82347934 | None:intergenic |
| ATAGGTGCTGCTACAGGAAG+AGG | 0.523625 | 4:+82347978 | None:intergenic |
| ACCTTCTTGCTCAAGGTGAA+GGG | 0.529065 | 4:+82347863 | None:intergenic |
| TTGGAATGGAAGGTTGGCCA+CGG | 0.532199 | 4:+82348033 | None:intergenic |
| GCACTGTTGGAATTGGTGGT+TGG | 0.532976 | 4:+82348111 | None:intergenic |
| TCACCACCTTTAACTTGGAT+GGG | 0.536006 | 4:-82347600 | MsG0480023225.01.T01:CDS |
| TCTTGTATAGGTGCTGCTAC+AGG | 0.537945 | 4:+82347972 | None:intergenic |
| TGTGGCACTGTTGGAATGGG+TGG | 0.538271 | 4:+82348065 | None:intergenic |
| CTGATCACCCTCCTGAGCCT+CGG | 0.541882 | 4:-82347686 | MsG0480023225.01.T01:CDS |
| ATCTTCGGCCAGGCAAGTCA+AGG | 0.543811 | 4:-82347746 | MsG0480023225.01.T01:CDS |
| CCGTGACGCCGCTCATGACG+TGG | 0.545871 | 4:+82347651 | None:intergenic |
| GCAATGGAACATGATCTTCA+TGG | 0.547827 | 4:+82347910 | None:intergenic |
| TGTGGCACTATTGAAATTGG+TGG | 0.549819 | 4:+82348149 | None:intergenic |
| TGATCTTCATGGTGTGGCAA+TGG | 0.555410 | 4:+82347921 | None:intergenic |
| CGTGGTGTCAATTGCCGCCG+AGG | 0.557484 | 4:+82347669 | None:intergenic |
| GGCTCAGGAGGGTGATCAGG+CGG | 0.558440 | 4:+82347690 | None:intergenic |
| GCACTATTGGAATGGAAGGT+TGG | 0.564304 | 4:+82348027 | None:intergenic |
| TGGCCACGAGGGTGTTGGTG+TGG | 0.565012 | 4:+82348089 | None:intergenic |
| CTGATGCGGTTTCCCTTGCG+TGG | 0.566574 | 4:+82347813 | None:intergenic |
| GGGTGTTGGTGTGGCACTGT+TGG | 0.570541 | 4:+82348098 | None:intergenic |
| CTATCATGATCTGCACGCAA+TGG | 0.572273 | 4:+82347894 | None:intergenic |
| GTTGGTTTCTCGACGAGACA+TGG | 0.574943 | 4:+82348220 | None:intergenic |
| TGCATTTGATCTTCATGCTG+AGG | 0.577782 | 4:+82348173 | None:intergenic |
| CTGCTACAGGAAGAGGTGGT+TGG | 0.578703 | 4:+82347985 | None:intergenic |
| CCTTCTTGCTCAAGGTGAAG+GGG | 0.579075 | 4:+82347864 | None:intergenic |
| GGAATGGGTGGTTGGCCACG+AGG | 0.579110 | 4:+82348077 | None:intergenic |
| GGCGGTGGTGGTATTACTGA+CGG | 0.579172 | 4:+82347708 | None:intergenic |
| GAATGGGTGGTTGGCCACGA+GGG | 0.583636 | 4:+82348078 | None:intergenic |
| TTGGTGTGGCACTATTGGAA+TGG | 0.600692 | 4:+82348019 | None:intergenic |
| TGGTCTAGAAAAGTGAGGGT+TGG | 0.604302 | 4:+82348202 | None:intergenic |
| TTGCGCGAGCCTCCACGCGG+TGG | 0.607313 | 4:+82347786 | None:intergenic |
| GTGGTTGGCCACGATGGTGT+TGG | 0.610810 | 4:+82348000 | None:intergenic |
| TAGTTTACAAGTTCCACGCA+AGG | 0.611354 | 4:-82347826 | MsG0480023225.01.T01:CDS |
| TGTGGCACTATTGGAATGGA+AGG | 0.613345 | 4:+82348023 | None:intergenic |
| TGGCCACGGTGGTGTTCATG+TGG | 0.614695 | 4:+82348131 | None:intergenic |
| AGTTTACAAGTTCCACGCAA+GGG | 0.618767 | 4:-82347825 | MsG0480023225.01.T01:CDS |
| CCACGTCATGAGCGGCGTCA+CGG | 0.623316 | 4:-82347651 | MsG0480023225.01.T01:CDS |
| AATTGACACCACGTCATGAG+CGG | 0.632624 | 4:-82347659 | MsG0480023225.01.T01:CDS |
| TGGTGTGGCAATGGAAAATG+AGG | 0.633592 | 4:+82347930 | None:intergenic |
| CGCAGTGGTCTAGAAAAGTG+AGG | 0.638468 | 4:+82348197 | None:intergenic |
| TGGCCACGATGGTGTTGGTG+TGG | 0.639265 | 4:+82348005 | None:intergenic |
| TCTTCGGCCAGGCAAGTCAA+GGG | 0.643851 | 4:-82347745 | MsG0480023225.01.T01:CDS |
| ATCACCCTCCTGAGCCTCGG+CGG | 0.644850 | 4:-82347683 | MsG0480023225.01.T01:CDS |
| TCTTCATGCTGAGGTCGCAG+TGG | 0.651385 | 4:+82348182 | None:intergenic |
| ATCAGCCAACCACCGCGTGG+AGG | 0.655044 | 4:-82347795 | MsG0480023225.01.T01:CDS |
| GGTGCTGCTACAGGAAGAGG+TGG | 0.657855 | 4:+82347981 | None:intergenic |
| GAAGAGGTGGTTGGCCACGA+TGG | 0.658042 | 4:+82347994 | None:intergenic |
| ATTGCCGCCGAGGCTCAGGA+GGG | 0.660785 | 4:+82347679 | None:intergenic |
| GCAGTGGTCTAGAAAAGTGA+GGG | 0.671293 | 4:+82348198 | None:intergenic |
| GAACTTGTAAACTAGGTGGT+TGG | 0.672035 | 4:+82347835 | None:intergenic |
| CGCATCAGCCAACCACCGCG+TGG | 0.672253 | 4:-82347798 | MsG0480023225.01.T01:CDS |
| GGAATGGAAGGTTGGCCACG+GGG | 0.674350 | 4:+82348035 | None:intergenic |
| GAATGGAAGGTTGGCCACGG+GGG | 0.682297 | 4:+82348036 | None:intergenic |
| GCACCCATCCAAGTTAAAGG+TGG | 0.683889 | 4:+82347597 | None:intergenic |
| GGAACATGATCTTCATGGTG+TGG | 0.688691 | 4:+82347915 | None:intergenic |
| CGTGGAACTTGTAAACTAGG+TGG | 0.690093 | 4:+82347831 | None:intergenic |
| GTGCCACACCAACACCCTCG+TGG | 0.701119 | 4:-82348092 | MsG0480023225.01.T01:CDS |
| GAATTGGTGGTTGGCCACGG+TGG | 0.710054 | 4:+82348120 | None:intergenic |
| CGTCATGAGCGGCGTCACGG+TGG | 0.721054 | 4:-82347648 | MsG0480023225.01.T01:CDS |
| GTGCCACACCAACACCATCG+TGG | 0.746712 | 4:-82348008 | MsG0480023225.01.T01:CDS |
| GTGCCACATGAACACCACCG+TGG | 0.803757 | 4:-82348134 | MsG0480023225.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAAAATCACCACCTTTAACT+TGG | - | Chr4:82348179-82348198 | MsG0480023225.01.T01:CDS | 30.0% | |
| TGATGAGATACATCTTGTAT+AGG | + | Chr4:82347827-82347846 | None:intergenic | 30.0% | |
| GCTTGCTTGTGTGTAATATT+TGG | - | Chr4:82348208-82348227 | MsG0480023225.01.T01:CDS | 35.0% | |
| TCATGTGGCACTATTGAAAT+TGG | + | Chr4:82347641-82347660 | None:intergenic | 35.0% | |
| ! | GGTGGTGATTTTTGTTCTTT+AGG | + | Chr4:82348172-82348191 | None:intergenic | 35.0% |
| AGTTTACAAGTTCCACGCAA+GGG | - | Chr4:82347959-82347978 | MsG0480023225.01.T01:CDS | 40.0% | |
| GAACTTGTAAACTAGGTGGT+TGG | + | Chr4:82347952-82347971 | None:intergenic | 40.0% | |
| GCAATGGAACATGATCTTCA+TGG | + | Chr4:82347877-82347896 | None:intergenic | 40.0% | |
| TAGTTTACAAGTTCCACGCA+AGG | - | Chr4:82347958-82347977 | MsG0480023225.01.T01:CDS | 40.0% | |
| TGCATTTGATCTTCATGCTG+AGG | + | Chr4:82347614-82347633 | None:intergenic | 40.0% | |
| TGGCAATGGAAAATGAGGTT+GGG | + | Chr4:82347852-82347871 | None:intergenic | 40.0% | |
| TGTGGCACTATTGAAATTGG+TGG | + | Chr4:82347638-82347657 | None:intergenic | 40.0% | |
| TTGCGTGGAACTTGTAAACT+AGG | + | Chr4:82347959-82347978 | None:intergenic | 40.0% | |
| ! | AGCATCGAGATCAAGATCTT+CGG | - | Chr4:82348023-82348042 | MsG0480023225.01.T01:CDS | 40.0% |
| !! | AAATTTACCCTTGACTTGCC+TGG | + | Chr4:82348049-82348068 | None:intergenic | 40.0% |
| !! | ATCACCACCTTTAACTTGGA+TGG | - | Chr4:82348183-82348202 | MsG0480023225.01.T01:CDS | 40.0% |
| !! | TCACCACCTTTAACTTGGAT+GGG | - | Chr4:82348184-82348203 | MsG0480023225.01.T01:CDS | 40.0% |
| AATTGACACCACGTCATGAG+CGG | - | Chr4:82348125-82348144 | MsG0480023225.01.T01:CDS | 45.0% | |
| ACCTTCTTGCTCAAGGTGAA+GGG | + | Chr4:82347924-82347943 | None:intergenic | 45.0% | |
| CAAGCACCCATCCAAGTTAA+AGG | + | Chr4:82348193-82348212 | None:intergenic | 45.0% | |
| CGTGGAACTTGTAAACTAGG+TGG | + | Chr4:82347956-82347975 | None:intergenic | 45.0% | |
| CTATCATGATCTGCACGCAA+TGG | + | Chr4:82347893-82347912 | None:intergenic | 45.0% | |
| GCACTATTGGAATGGAAGGT+TGG | + | Chr4:82347760-82347779 | None:intergenic | 45.0% | |
| GCAGTGGTCTAGAAAAGTGA+GGG | + | Chr4:82347589-82347608 | None:intergenic | 45.0% | |
| GGAACATGATCTTCATGGTG+TGG | + | Chr4:82347872-82347891 | None:intergenic | 45.0% | |
| GGCAATGGAAAATGAGGTTG+GGG | + | Chr4:82347851-82347870 | None:intergenic | 45.0% | |
| GTGGCAATGGAAAATGAGGT+TGG | + | Chr4:82347853-82347872 | None:intergenic | 45.0% | |
| TGATCTTCATGGTGTGGCAA+TGG | + | Chr4:82347866-82347885 | None:intergenic | 45.0% | |
| TGGTCTAGAAAAGTGAGGGT+TGG | + | Chr4:82347585-82347604 | None:intergenic | 45.0% | |
| TGGTGTGGCAATGGAAAATG+AGG | + | Chr4:82347857-82347876 | None:intergenic | 45.0% | |
| TGTGGCACTATTGGAATGGA+AGG | + | Chr4:82347764-82347783 | None:intergenic | 45.0% | |
| TTGGTGTGGCACTATTGGAA+TGG | + | Chr4:82347768-82347787 | None:intergenic | 45.0% | |
| !! | TCTTGTATAGGTGCTGCTAC+AGG | + | Chr4:82347815-82347834 | None:intergenic | 45.0% |
| CCTTCTTGCTCAAGGTGAAG+GGG | + | Chr4:82347923-82347942 | None:intergenic | 50.0% | |
| CGCAGTGGTCTAGAAAAGTG+AGG | + | Chr4:82347590-82347609 | None:intergenic | 50.0% | |
| GACCTTCTTGCTCAAGGTGA+AGG | + | Chr4:82347925-82347944 | None:intergenic | 50.0% | |
| GCACCCATCCAAGTTAAAGG+TGG | + | Chr4:82348190-82348209 | None:intergenic | 50.0% | |
| GGTGATGACCTTCTTGCTCA+AGG | + | Chr4:82347931-82347950 | None:intergenic | 50.0% | |
| TGGTGTGGCACTGTTGGAAT+GGG | + | Chr4:82347683-82347702 | None:intergenic | 50.0% | |
| TGGTGTGGCACTGTTGGAAT+TGG | + | Chr4:82347683-82347702 | None:intergenic | 50.0% | |
| TGTGGCACTGTTGGAATTGG+TGG | + | Chr4:82347680-82347699 | None:intergenic | 50.0% | |
| TTGGTGTGGCACTGTTGGAA+TGG | + | Chr4:82347684-82347703 | None:intergenic | 50.0% | |
| ! | GCACTGTTGGAATTGGTGGT+TGG | + | Chr4:82347676-82347695 | None:intergenic | 50.0% |
| ! | TTGGAATGGAAGGTTGGCCA+CGG | + | Chr4:82347754-82347773 | None:intergenic | 50.0% |
| ! | TTGGAATTGGTGGTTGGCCA+CGG | + | Chr4:82347670-82347689 | None:intergenic | 50.0% |
| !! | ATAGGTGCTGCTACAGGAAG+AGG | + | Chr4:82347809-82347828 | None:intergenic | 50.0% |
| !! | TGGTGTTGGTGTGGCACTAT+TGG | + | Chr4:82347773-82347792 | None:intergenic | 50.0% |
| ATCTTCGGCCAGGCAAGTCA+AGG | - | Chr4:82348038-82348057 | MsG0480023225.01.T01:CDS | 55.0% | |
| CCCCTTCACCTTGAGCAAGA+AGG | - | Chr4:82347920-82347939 | MsG0480023225.01.T01:CDS | 55.0% | |
| CGAGATCAAGATCTTCGGCC+AGG | - | Chr4:82348028-82348047 | MsG0480023225.01.T01:CDS | 55.0% | |
| CTGCTACAGGAAGAGGTGGT+TGG | + | Chr4:82347802-82347821 | None:intergenic | 55.0% | |
| GCACTGTTGGAATGGGTGGT+TGG | + | Chr4:82347718-82347737 | None:intergenic | 55.0% | |
| TCTTCATGCTGAGGTCGCAG+TGG | + | Chr4:82347605-82347624 | None:intergenic | 55.0% | |
| TCTTCGGCCAGGCAAGTCAA+GGG | - | Chr4:82348039-82348058 | MsG0480023225.01.T01:CDS | 55.0% | |
| TGTGGCACTGTTGGAATGGG+TGG | + | Chr4:82347722-82347741 | None:intergenic | 55.0% | |
| ! | GGCGGTGGTGGTATTACTGA+CGG | + | Chr4:82348079-82348098 | None:intergenic | 55.0% |
| ! | TGGAATGGAAGGTTGGCCAC+GGG | + | Chr4:82347753-82347772 | None:intergenic | 55.0% |
| AGCGGCGTCACGGTGGTATA+AGG | - | Chr4:82348143-82348162 | MsG0480023225.01.T01:CDS | 60.0% | |
| CTGATCACCCTCCTGAGCCT+CGG | - | Chr4:82348098-82348117 | MsG0480023225.01.T01:CDS | 60.0% | |
| CTGATGCGGTTTCCCTTGCG+TGG | + | Chr4:82347974-82347993 | None:intergenic | 60.0% | |
| GTGCCACACCAACACCATCG+TGG | - | Chr4:82347776-82347795 | MsG0480023225.01.T01:CDS | 60.0% | |
| GTGCCACATGAACACCACCG+TGG | - | Chr4:82347650-82347669 | MsG0480023225.01.T01:CDS | 60.0% | |
| TGGCCACGGTGGTGTTCATG+TGG | + | Chr4:82347656-82347675 | None:intergenic | 60.0% | |
| ! | GAAGAGGTGGTTGGCCACGA+TGG | + | Chr4:82347793-82347812 | None:intergenic | 60.0% |
| ! | GAATGGAAGGTTGGCCACGG+GGG | + | Chr4:82347751-82347770 | None:intergenic | 60.0% |
| ! | GAATGGGTGGTTGGCCACGA+GGG | + | Chr4:82347709-82347728 | None:intergenic | 60.0% |
| ! | GAATTGGTGGTTGGCCACGG+TGG | + | Chr4:82347667-82347686 | None:intergenic | 60.0% |
| ! | GGAATGGAAGGTTGGCCACG+GGG | + | Chr4:82347752-82347771 | None:intergenic | 60.0% |
| ! | GTGGTTGGCCACGATGGTGT+TGG | + | Chr4:82347787-82347806 | None:intergenic | 60.0% |
| ! | TTTTTGCGCGAGCCTCCACG+CGG | + | Chr4:82348004-82348023 | None:intergenic | 60.0% |
| !! | GGGTGTTGGTGTGGCACTGT+TGG | + | Chr4:82347689-82347708 | None:intergenic | 60.0% |
| !! | GGTGCTGCTACAGGAAGAGG+TGG | + | Chr4:82347806-82347825 | None:intergenic | 60.0% |
| !! | TGGCCACGATGGTGTTGGTG+TGG | + | Chr4:82347782-82347801 | None:intergenic | 60.0% |
| AATTGCCGCCGAGGCTCAGG+AGG | + | Chr4:82348109-82348128 | None:intergenic | 65.0% | |
| ATCACCCTCCTGAGCCTCGG+CGG | - | Chr4:82348101-82348120 | MsG0480023225.01.T01:CDS | 65.0% | |
| ATCAGCCAACCACCGCGTGG+AGG | - | Chr4:82347989-82348008 | MsG0480023225.01.T01:CDS | 65.0% | |
| ATTGCCGCCGAGGCTCAGGA+GGG | + | Chr4:82348108-82348127 | None:intergenic | 65.0% | |
| CCACGTCATGAGCGGCGTCA+CGG | - | Chr4:82348133-82348152 | MsG0480023225.01.T01:CDS | 65.0% | |
| CGAGGCTCAGGAGGGTGATC+AGG | + | Chr4:82348100-82348119 | None:intergenic | 65.0% | |
| GGCTCAGGAGGGTGATCAGG+CGG | + | Chr4:82348097-82348116 | None:intergenic | 65.0% | |
| GTCAATTGCCGCCGAGGCTC+AGG | + | Chr4:82348112-82348131 | None:intergenic | 65.0% | |
| GTGCCACACCAACACCCTCG+TGG | - | Chr4:82347692-82347711 | MsG0480023225.01.T01:CDS | 65.0% | |
| TCAGGAGGGTGATCAGGCGG+TGG | + | Chr4:82348094-82348113 | None:intergenic | 65.0% | |
| ! | AAGGTTGGCCACGGGGGTGT+TGG | + | Chr4:82347745-82347764 | None:intergenic | 65.0% |
| ! | CACGCGGTGGTTGGCTGATG+CGG | + | Chr4:82347988-82348007 | None:intergenic | 65.0% |
| ! | CGTGGTGTCAATTGCCGCCG+AGG | + | Chr4:82348118-82348137 | None:intergenic | 65.0% |
| ! | GGAATGGGTGGTTGGCCACG+AGG | + | Chr4:82347710-82347729 | None:intergenic | 65.0% |
| ! | GTGGTTGGCCACGAGGGTGT+TGG | + | Chr4:82347703-82347722 | None:intergenic | 65.0% |
| !! | TGGCCACGAGGGTGTTGGTG+TGG | + | Chr4:82347698-82347717 | None:intergenic | 65.0% |
| CCGTGACGCCGCTCATGACG+TGG | + | Chr4:82348136-82348155 | None:intergenic | 70.0% | |
| CGCATCAGCCAACCACCGCG+TGG | - | Chr4:82347986-82348005 | MsG0480023225.01.T01:CDS | 70.0% | |
| CGTCATGAGCGGCGTCACGG+TGG | - | Chr4:82348136-82348155 | MsG0480023225.01.T01:CDS | 70.0% | |
| GGAGGGTGATCAGGCGGTGG+TGG | + | Chr4:82348091-82348110 | None:intergenic | 70.0% | |
| GTGCCACACCAACACCCCCG+TGG | - | Chr4:82347734-82347753 | MsG0480023225.01.T01:CDS | 70.0% | |
| !! | TGGCCACGGGGGTGTTGGTG+TGG | + | Chr4:82347740-82347759 | None:intergenic | 70.0% |
| GCGAGCCTCCACGCGGTGGT+TGG | + | Chr4:82347997-82348016 | None:intergenic | 75.0% | |
| TTGCGCGAGCCTCCACGCGG+TGG | + | Chr4:82348001-82348020 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 82347566 | 82348240 | 82347566 | ID=MsG0480023225.01;Name=MsG0480023225.01 |
| Chr4 | mRNA | 82347566 | 82348240 | 82347566 | ID=MsG0480023225.01.T01;Parent=MsG0480023225.01;Name=MsG0480023225.01.T01;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|224 |
| Chr4 | exon | 82347566 | 82348240 | 82347566 | ID=MsG0480023225.01.T01:exon:2592;Parent=MsG0480023225.01.T01 |
| Chr4 | CDS | 82347566 | 82348240 | 82347566 | ID=MsG0480023225.01.T01:cds;Parent=MsG0480023225.01.T01 |
| Gene Sequence |
| Protein sequence |
