AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023642.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023642.01.T01 MTR_8g098290 83.427 356 15 2 30 341 69 424 0.0 596
MsG0480023642.01.T01 MTR_8g098290 98.571 70 1 0 342 411 502 571 1.04e-38 147
MsG0480023642.01.T01 MTR_8g098290 83.193 357 16 2 30 342 69 425 0.0 595
MsG0480023642.01.T01 MTR_5g010190 57.337 368 106 7 23 341 57 422 3.26e-133 391
MsG0480023642.01.T01 MTR_5g010190 57.337 368 106 7 23 341 57 422 6.50e-132 392
MsG0480023642.01.T01 MTR_5g010190 61.667 60 22 1 341 399 499 558 1.54e-14 76.3
MsG0480023642.01.T01 MTR_8g098260 61.905 357 89 5 30 341 47 401 6.89e-128 400
MsG0480023642.01.T01 MTR_8g098260 72.727 66 14 2 342 404 479 543 1.05e-19 92.8
MsG0480023642.01.T01 MTR_6g464540 48.287 321 111 9 34 342 50 327 2.70e-85 265
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023642.01.T01 AT4G11560 46.429 392 155 7 32 381 99 477 6.00e-108 328
MsG0480023642.01.T01 AT4G11560 46.429 392 155 7 32 381 99 477 8.89e-107 328
MsG0480023642.01.T01 AT2G25120 38.329 347 165 8 19 349 48 361 4.65e-54 185
MsG0480023642.01.T01 AT4G23120 40.060 332 152 11 27 341 22 323 2.88e-49 171
MsG0480023642.01.T01 AT3G43990 52.239 134 63 1 27 160 47 179 7.65e-40 147
MsG0480023642.01.T01 AT3G48050 38.000 100 58 3 60 159 47 142 3.51e-11 66.2
MsG0480023642.01.T01 AT3G48050 38.000 100 58 3 60 159 47 142 3.51e-11 66.2
MsG0480023642.01.T01 AT3G48060 38.000 100 58 3 60 159 47 142 3.86e-11 65.9
MsG0480023642.01.T01 AT3G48060 38.000 100 58 3 60 159 47 142 3.86e-11 65.9
MsG0480023642.01.T01 AT3G48060 38.000 100 58 3 60 159 48 143 3.86e-11 65.9

Find 147 sgRNAs with CRISPR-Local

Find 477 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGCTTCCATTTCCATTTA+TGG 0.039959 4:-88015317 None:intergenic
CACTCTTTAAGCACTTTAAA+TGG 0.153593 4:+88019724 MsG0480023642.01.T01:three_prime_UTR
AGACTAGCTGTCGTAACTTT+TGG 0.222495 4:-88016295 None:intergenic
CTTCGATGTTTCATCTTTCC+TGG 0.238340 4:-88019426 None:intergenic
AGGAGGAGTATTCTATCTTT+TGG 0.273136 4:+88019467 MsG0480023642.01.T01:CDS
GACATCACACAATCCATAAA+TGG 0.285616 4:+88015304 MsG0480023642.01.T01:CDS
GGACAACTCCCTGGTGTTCC+AGG 0.309381 4:-88015807 None:intergenic
TCTTTATGCCGCCTGTTTCC+AGG 0.316399 4:+88019408 MsG0480023642.01.T01:CDS
GCATAGCTTGTGGTCATTCC+TGG 0.328387 4:+88019240 MsG0480023642.01.T01:CDS
AATTAATAGATGAAAGAAAA+AGG 0.346892 4:-88020220 None:intergenic
TGAGATTCAGAGAGTGGAAT+TGG 0.350750 4:-88013922 None:intergenic
TGTTGTCGTTGTGTGCTCTT+TGG 0.352020 4:+88020021 MsG0480023642.01.T01:three_prime_UTR
CCGGGATGTACCTTACGATT+TGG 0.356202 4:-88015514 None:intergenic
AGTTTCAAGACGTGCTGATT+AGG 0.362194 4:+88019447 MsG0480023642.01.T01:CDS
GTTTCATCTTTCCTGGAAAC+AGG 0.368375 4:-88019419 None:intergenic
TAGTTCGTTATCTTCTAGTT+TGG 0.368507 4:+88019607 MsG0480023642.01.T01:three_prime_UTR
ACTCTTTAAGCACTTTAAAT+GGG 0.378737 4:+88019725 MsG0480023642.01.T01:three_prime_UTR
ATTTGGAAGTTGTTTGTGTA+TGG 0.380933 4:-88015497 None:intergenic
TGATGAAGCTGCTGCTGATC+AGG 0.382210 4:+88015683 MsG0480023642.01.T01:CDS
TCAGAGAGTGGAATTGGAAA+TGG 0.387489 4:-88013916 None:intergenic
GTCGTAGTCGCCATTGTCTC+TGG 0.397411 4:+88020099 MsG0480023642.01.T01:three_prime_UTR
ATTGGAAATGGAAATGGAAA+TGG 0.400783 4:-88013904 None:intergenic
ATGGGTTTAGCGTCTTCAAC+TGG 0.409853 4:-88014163 None:intergenic
GATGATATACGAGTGAATAT+TGG 0.420344 4:-88014261 None:intergenic
ACACAATCCATAAATGGAAA+TGG 0.420558 4:+88015310 MsG0480023642.01.T01:CDS
TTTCAGCTATTGATGTTTCA+AGG 0.424153 4:+88015745 MsG0480023642.01.T01:CDS
CACGCAACAACAACGTCAAC+TGG 0.429051 4:-88019987 None:intergenic
ACCTTGATAATTGCGACATA+CGG 0.431264 4:-88014501 None:intergenic
AGTGGAATTGGAAATGGAAA+TGG 0.432355 4:-88013910 None:intergenic
AAGGGCTGAGATTGCCTGAC+AGG 0.434084 4:-88019786 None:intergenic
TAGCCATCGTGACAAGGGTT+TGG 0.435591 4:+88015887 MsG0480023642.01.T01:CDS
AACCTAACGGGTTCACCAAT+GGG 0.437811 4:-88014181 None:intergenic
ATTGCCTGACAGGAGAAAAC+TGG 0.442046 4:-88019776 None:intergenic
TCTCGTGAGGGAAGAAGGTT+GGG 0.442162 4:-88019866 None:intergenic
TGATGCTCTGTGGTAATAAC+TGG 0.445613 4:-88015828 None:intergenic
TGTTGTTGCGTGCTATTTGT+TGG 0.450932 4:+88019998 MsG0480023642.01.T01:three_prime_UTR
ATTGGTCTTGTCAGATTCAC+GGG 0.458297 4:-88019381 None:intergenic
CTTCCAACCTCGGAGGCAAA+AGG 0.463571 4:+88014024 MsG0480023642.01.T01:five_prime_UTR
TACAGTTGTGCATCTATATC+CGG 0.464720 4:+88013762 MsG0480023642.01.T01:five_prime_UTR
GCCGAGTGACGAGGCTGAGA+AGG 0.469280 4:+88014081 MsG0480023642.01.T01:CDS
TCCTTCTCAGCCTCGTCACT+CGG 0.475898 4:-88014082 None:intergenic
TTCTCCAGAGCAACTACAGC+TGG 0.476425 4:-88016230 None:intergenic
TCAAATTTCGCAGTTGCCCA+TGG 0.478662 4:-88019335 None:intergenic
AACCCATTGGTGAACCCGTT+AGG 0.478741 4:+88014179 MsG0480023642.01.T01:CDS
ACAGCTGGAACAGCAACATC+TGG 0.480099 4:-88016215 None:intergenic
GTGGGTCTCGTGAGGGAAGA+AGG 0.480226 4:-88019871 None:intergenic
CGCATCACGAGAGGCAGACC+AGG 0.481336 4:-88019258 None:intergenic
TCTCTGAAACCTGGAACACC+AGG 0.483246 4:+88015798 MsG0480023642.01.T01:CDS
TAAAGTGCTTAAAGAGTGCC+CGG 0.487012 4:-88019719 None:intergenic
TGTTCCAGCTGTAGTTGCTC+TGG 0.490575 4:+88016226 MsG0480023642.01.T01:CDS
CAACTGCGAAATTTGATGTT+GGG 0.491494 4:+88019342 MsG0480023642.01.T01:CDS
GTCTCGTGAGGGAAGAAGGT+TGG 0.492056 4:-88019867 None:intergenic
GACGGCAACATCAATATAGA+TGG 0.493700 4:-88019956 None:intergenic
CCTCCGAGGTTGGAAGGAGT+CGG 0.494800 4:-88014017 None:intergenic
AGCTGTAGTTGCTCTGGAGA+AGG 0.495264 4:+88016232 MsG0480023642.01.T01:CDS
AAATAGAAGAAACTTTAAGA+AGG 0.497072 4:+88015719 MsG0480023642.01.T01:CDS
GTTGTCTTCATCGTCGTCAC+TGG 0.497783 4:-88013985 None:intergenic
AATGGGGAATGGATTGTCTC+TGG 0.498640 4:+88019742 MsG0480023642.01.T01:three_prime_UTR
GAAATGTAGGCACGGCCCCA+TGG 0.498959 4:+88019318 MsG0480023642.01.T01:CDS
TAAGCACTTTAAATGGGGAA+TGG 0.500731 4:+88019731 MsG0480023642.01.T01:three_prime_UTR
GTCGCCATTGTCTCTGGTAC+CGG 0.502653 4:+88020105 MsG0480023642.01.T01:three_prime_UTR
CCTCGGAGGCAAAAGGAAGA+TGG 0.503625 4:+88014031 MsG0480023642.01.T01:five_prime_UTR
CAGAAAACTCGTCAACGGTT+GGG 0.504228 4:+88015639 MsG0480023642.01.T01:intron
AATGGAAGCTTGATGATCAC+AGG 0.509765 4:+88015328 MsG0480023642.01.T01:CDS
AATAGAAGAAACTTTAAGAA+GGG 0.511912 4:+88015720 MsG0480023642.01.T01:CDS
CATTGGTCTTGTCAGATTCA+CGG 0.511947 4:-88019382 None:intergenic
CAAATTTCGCAGTTGCCCAT+GGG 0.512135 4:-88019334 None:intergenic
GAAACTATAAAACAGCTCTC+TGG 0.514714 4:-88015416 None:intergenic
GTGTTCCAGGTTTCAGAGAG+TGG 0.515192 4:-88015794 None:intergenic
TTTCAGTCCTTCGACTTCGA+TGG 0.516706 4:+88014235 MsG0480023642.01.T01:CDS
ACCTCGGGCACAAGAAGCAC+AGG 0.517100 4:-88014465 None:intergenic
TCAGAAAACTCGTCAACGGT+TGG 0.519475 4:+88015638 MsG0480023642.01.T01:intron
GCTTCATCAGTCTTGATGTC+AGG 0.519787 4:-88015669 None:intergenic
GAAATGTTAACGAGTGCCCC+CGG 0.520711 4:+88019700 MsG0480023642.01.T01:three_prime_UTR
AGGTTGGAAGGAGTCGGTTG+TGG 0.520790 4:-88014011 None:intergenic
TGACGAGGATATATATACAT+AGG 0.521574 4:+88019677 MsG0480023642.01.T01:three_prime_UTR
GCCGTATGTCGCAATTATCA+AGG 0.521805 4:+88014500 MsG0480023642.01.T01:CDS
GATAACTATACACAACCTAC+TGG 0.524019 4:-88019517 None:intergenic
AAATGTAGGCACGGCCCCAT+GGG 0.524078 4:+88019319 MsG0480023642.01.T01:CDS
AGGCGGCATAAAGATGTCAT+TGG 0.534499 4:-88019399 None:intergenic
TTCAGCTATTGATGTTTCAA+GGG 0.535846 4:+88015746 MsG0480023642.01.T01:CDS
GCAACTGCGAAATTTGATGT+TGG 0.536898 4:+88019341 MsG0480023642.01.T01:CDS
TTTCATTAAAAGGAAATGAA+GGG 0.538504 4:-88019804 None:intergenic
CCCTGTGCTTCTTGTGCCCG+AGG 0.539535 4:+88014464 MsG0480023642.01.T01:CDS
TTGGAAGTTGTTTGTGTATG+GGG 0.541279 4:-88015495 None:intergenic
TCAATATAGATGGTGTTCAC+TGG 0.542084 4:-88019946 None:intergenic
TCTGATGCTATTAACAATGA+AGG 0.542988 4:+88015987 MsG0480023642.01.T01:CDS
GGCTGAGAAGGAGGAAGAAG+AGG 0.543311 4:+88014093 MsG0480023642.01.T01:CDS
TTCAAGACGTGCTGATTAGG+AGG 0.544820 4:+88019450 MsG0480023642.01.T01:CDS
ATTTGATGTTGGGAAGAAGC+TGG 0.548027 4:+88019352 MsG0480023642.01.T01:CDS
AAACCTAACGGGTTCACCAA+TGG 0.548184 4:-88014182 None:intergenic
ACAGCTAGTCTTTAATCTCA+AGG 0.550261 4:+88016307 MsG0480023642.01.T01:CDS
GATAATCTGATGAAAATGTA+TGG 0.551108 4:-88016262 None:intergenic
CTCTTTAAGCACTTTAAATG+GGG 0.555171 4:+88019726 MsG0480023642.01.T01:three_prime_UTR
ATCTGGCCAGACAAAAGACT+TGG 0.555544 4:-88016198 None:intergenic
AGGAGATAGCCATCGTGACA+AGG 0.557906 4:+88015881 MsG0480023642.01.T01:CDS
TTTGGAAGTTGTTTGTGTAT+GGG 0.559208 4:-88015496 None:intergenic
GACGAGGATATATATACATA+GGG 0.561628 4:+88019678 MsG0480023642.01.T01:three_prime_UTR
AGTCTCCACTCTCTGAAACC+TGG 0.562516 4:+88015789 MsG0480023642.01.T01:CDS
TTGTTGTGAGATTCAGAGAG+TGG 0.568224 4:-88013928 None:intergenic
TTTGGAATTATAGTACCAGT+AGG 0.570530 4:+88019502 MsG0480023642.01.T01:exon
GCTTGATGATCACAGGGCAG+TGG 0.574881 4:+88015335 MsG0480023642.01.T01:CDS
AGCTATTGATGTTTCAAGGG+AGG 0.575509 4:+88015749 MsG0480023642.01.T01:CDS
AAACAGCTCTCTGGTGTCAA+CGG 0.576675 4:-88015407 None:intergenic
GTTGAAGACGCTAAACCCAT+TGG 0.577340 4:+88014166 MsG0480023642.01.T01:CDS
ATAAATACTATAACAATCAA+CGG 0.578298 4:-88020187 None:intergenic
CAACCGACTCCTTCCAACCT+CGG 0.578331 4:+88014014 MsG0480023642.01.T01:five_prime_UTR
ACAGGAAAGTGGGTCTCGTG+AGG 0.578888 4:-88019879 None:intergenic
CTGAATCTCACAACAAACAA+TGG 0.581277 4:+88013935 MsG0480023642.01.T01:five_prime_UTR
GAGTGACGAGGCTGAGAAGG+AGG 0.584413 4:+88014084 MsG0480023642.01.T01:CDS
CAAACAACTTCCAAATCGTA+AGG 0.589088 4:+88015504 MsG0480023642.01.T01:CDS
AAAGTGCTTAAAGAGTGCCC+GGG 0.594463 4:-88019718 None:intergenic
GTAATAACTGGACAACTCCC+TGG 0.594989 4:-88015816 None:intergenic
ATGGATGTTGCAACAGAGAG+AGG 0.598162 4:-88020138 None:intergenic
CTGGTCTGCCTCTCGTGATG+CGG 0.602163 4:+88019259 MsG0480023642.01.T01:CDS
ATTCTGCAGGAACCTCATCT+CGG 0.604407 4:-88015441 None:intergenic
CAGGAAAGTGGGTCTCGTGA+GGG 0.612346 4:-88019878 None:intergenic
TTATGCATAACAGATTCTGC+AGG 0.612906 4:-88015454 None:intergenic
GCCATTGTCTCTGGTACCGG+TGG 0.614324 4:+88020108 MsG0480023642.01.T01:three_prime_UTR
TTATAGTTTCCACCGAGATG+AGG 0.616938 4:+88015429 MsG0480023642.01.T01:CDS
AAGTGCTTAAAGAGTGCCCG+GGG 0.620414 4:-88019717 None:intergenic
TTGGTCTCCATCGAAGTCGA+AGG 0.620863 4:-88014242 None:intergenic
TTGTTCAGAAAACTCGTCAA+CGG 0.626910 4:+88015634 MsG0480023642.01.T01:intron
CTAGAAGATAACGAACTACA+CGG 0.633264 4:-88019602 None:intergenic
ATTAGTACACTGTCTGTGCG+TGG 0.635102 4:+88013870 MsG0480023642.01.T01:five_prime_UTR
AAATTTCGCAGTTGCCCATG+GGG 0.641672 4:-88019333 None:intergenic
TCGCCAAACCCTTGTCACGA+TGG 0.646277 4:-88015890 None:intergenic
GGAGATAGCCATCGTGACAA+GGG 0.652066 4:+88015882 MsG0480023642.01.T01:CDS
TCATCTTTCCTGGAAACAGG+CGG 0.652086 4:-88019416 None:intergenic
CGTCAACTGGTAACACGCGA+CGG 0.655573 4:-88019974 None:intergenic
ACCACCGGTACCAGAGACAA+TGG 0.656402 4:-88020109 None:intergenic
AAATGGATGTTGACTTGACG+AGG 0.657204 4:+88019662 MsG0480023642.01.T01:three_prime_UTR
AATTCTGTAGAGCGAAACAA+TGG 0.659281 4:-88016175 None:intergenic
ATGGAAGCTTGATGATCACA+GGG 0.666809 4:+88015329 MsG0480023642.01.T01:CDS
GCCTGACAGGAGAAAACTGG+AGG 0.668359 4:-88019773 None:intergenic
AGAGAGAGGACGTTAACCAC+CGG 0.670306 4:-88020124 None:intergenic
CACAGACACCGCATCACGAG+AGG 0.671514 4:-88019267 None:intergenic
CAGCTGGAATGCATAGCTTG+TGG 0.679347 4:+88019230 MsG0480023642.01.T01:intron
ATCTGTTATGCATAAGTGTG+TGG 0.679710 4:+88015462 MsG0480023642.01.T01:CDS
CTGCAGGAACCTCATCTCGG+TGG 0.688627 4:-88015438 None:intergenic
CTCTGAAACCTGGAACACCA+GGG 0.695985 4:+88015799 MsG0480023642.01.T01:CDS
TTGGTCTTGTCAGATTCACG+GGG 0.706246 4:-88019380 None:intergenic
TAATATGCGCTGATGCTCTG+TGG 0.715970 4:-88015838 None:intergenic
CCTCGGGCACAAGAAGCACA+GGG 0.717134 4:-88014464 None:intergenic
CCGACTCCTTCCAACCTCGG+AGG 0.723347 4:+88014017 MsG0480023642.01.T01:five_prime_UTR
CATTGTTAATAGCATCAGAG+CGG 0.753559 4:-88015983 None:intergenic
AGTGCTTAAAGAGTGCCCGG+GGG 0.807502 4:-88019716 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATGTTCAAAATTATAA+AGG - Chr4:88018163-88018182 None:intergenic 10.0%
!!! ATATATATTTTCAAAAAACA+AGG - Chr4:88014565-88014584 None:intergenic 10.0%
!!! GTTATAGTATTTATTTTAAT+TGG + Chr4:88020196-88020215 MsG0480023642.01.T01:three_prime_UTR 10.0%
!! AATGTATTAATTATCAACAA+AGG - Chr4:88014755-88014774 None:intergenic 15.0%
!! AATTAATAGATGAAAGAAAA+AGG - Chr4:88020223-88020242 None:intergenic 15.0%
!! ACGTTATAAAATAGAATTAT+GGG + Chr4:88015152-88015171 MsG0480023642.01.T01:intron 15.0%
!! AGAAAGAAAAAAAAAAACAA+AGG - Chr4:88014719-88014738 None:intergenic 15.0%
!! ATAAATACTATAACAATCAA+CGG - Chr4:88020190-88020209 None:intergenic 15.0%
!! TATTATTAAAAATAATCACC+AGG + Chr4:88016496-88016515 MsG0480023642.01.T01:intron 15.0%
!!! AAATGATTTAAATGTTTTAC+AGG - Chr4:88019900-88019919 None:intergenic 15.0%
!!! ATAAAAATTGTTGATTTATG+TGG - Chr4:88017600-88017619 None:intergenic 15.0%
!!! TATATATATATATGTTGGTT+TGG + Chr4:88014582-88014601 MsG0480023642.01.T01:intron 15.0%
!! ACTTAAAAAGATTCACAATT+TGG - Chr4:88017632-88017651 None:intergenic 20.0%
!! AGGTCAGAAAAAATAAATAT+GGG - Chr4:88017899-88017918 None:intergenic 20.0%
!! ATAAAAAAAAGCTGAAAAGA+TGG - Chr4:88018029-88018048 None:intergenic 20.0%
!! CAGATAACATAAAAATTGTT+AGG - Chr4:88018980-88018999 None:intergenic 20.0%
!! GACGTTATAAAATAGAATTA+TGG + Chr4:88015151-88015170 MsG0480023642.01.T01:intron 20.0%
!! TAACATAAAAATTGTTAGGA+TGG - Chr4:88018976-88018995 None:intergenic 20.0%
!! TTATCATCATTAATCACATA+CGG - Chr4:88018525-88018544 None:intergenic 20.0%
!! TTCATATTCAAAACAAAGAA+TGG - Chr4:88017459-88017478 None:intergenic 20.0%
!! TTTCATTAAAAGGAAATGAA+GGG - Chr4:88019807-88019826 None:intergenic 20.0%
!!! AAATAGAAGAAACTTTAAGA+AGG + Chr4:88015719-88015738 MsG0480023642.01.T01:CDS 20.0%
!!! AATACCAATTTTTTGTCAAA+CGG - Chr4:88018280-88018299 None:intergenic 20.0%
!!! AATAGAAGAAACTTTAAGAA+GGG + Chr4:88015720-88015739 MsG0480023642.01.T01:CDS 20.0%
!!! AGGTTTTTAGATATTTTACT+AGG - Chr4:88018382-88018401 None:intergenic 20.0%
!!! GTCATATTCAATATTTTTGA+AGG - Chr4:88017976-88017995 None:intergenic 20.0%
!!! GTTTTTTTTTTTCTTTCTGA+AGG + Chr4:88014721-88014740 MsG0480023642.01.T01:intron 20.0%
!!! TATTGATTAAGAACTATTAG+AGG - Chr4:88017414-88017433 None:intergenic 20.0%
!!! TGTATAGTTATCTTTTAGTT+TGG + Chr4:88019528-88019547 MsG0480023642.01.T01:three_prime_UTR 20.0%
!!! TTCCTTTTAATGAAAATCAA+CGG + Chr4:88019812-88019831 MsG0480023642.01.T01:three_prime_UTR 20.0%
!!! TTTTCATTAAAAGGAAATGA+AGG - Chr4:88019808-88019827 None:intergenic 20.0%
!!! TTTTTCTTGTAGTATTTTCA+TGG + Chr4:88018456-88018475 MsG0480023642.01.T01:intron 20.0%
! AAAAAGAAAGAAGACAAATG+TGG + Chr4:88015957-88015976 MsG0480023642.01.T01:CDS 25.0%
! AAAATAGTACCATCTAAACT+GGG + Chr4:88016533-88016552 MsG0480023642.01.T01:intron 25.0%
! ACTCTTTAAGCACTTTAAAT+GGG + Chr4:88019725-88019744 MsG0480023642.01.T01:three_prime_UTR 25.0%
! ATTGTGGAAATTAACTGATA+AGG + Chr4:88015576-88015595 MsG0480023642.01.T01:intron 25.0%
! CACATGTTTAAGTGAAATAT+GGG - Chr4:88017184-88017203 None:intergenic 25.0%
! CTATCCTAATATGATAACTT+TGG - Chr4:88016877-88016896 None:intergenic 25.0%
! CTGAACTTAGTAAATGAATT+GGG + Chr4:88018644-88018663 MsG0480023642.01.T01:intron 25.0%
! CTTATCAAAATCATATGTAG+TGG - Chr4:88016420-88016439 None:intergenic 25.0%
! GAATATTATCTACTGAATGT+TGG + Chr4:88019010-88019029 MsG0480023642.01.T01:intron 25.0%
! GAGGTCAGAAAAAATAAATA+TGG - Chr4:88017900-88017919 None:intergenic 25.0%
! GATAATCTGATGAAAATGTA+TGG - Chr4:88016265-88016284 None:intergenic 25.0%
! GTATCCAAAGTTATCATATT+AGG + Chr4:88016870-88016889 MsG0480023642.01.T01:intron 25.0%
! TAAAATAGTACCATCTAAAC+TGG + Chr4:88016532-88016551 MsG0480023642.01.T01:intron 25.0%
! TATAACAATGCGACAAAATT+TGG - Chr4:88015093-88015112 None:intergenic 25.0%
! TATGAATTTAGTGATCATCT+GGG + Chr4:88014635-88014654 MsG0480023642.01.T01:intron 25.0%
! TATGACAATTGTCACTATTA+GGG + Chr4:88014368-88014387 MsG0480023642.01.T01:intron 25.0%
! TCACATGTTTAAGTGAAATA+TGG - Chr4:88017185-88017204 None:intergenic 25.0%
! TCTACATGTTATAAAGAGAA+GGG - Chr4:88015233-88015252 None:intergenic 25.0%
! TGAACTTAGTAAATGAATTG+GGG + Chr4:88018645-88018664 MsG0480023642.01.T01:intron 25.0%
! TTAAATACCTTCAATTCAGT+AGG - Chr4:88018000-88018019 None:intergenic 25.0%
! TTATGAATTTAGTGATCATC+TGG + Chr4:88014634-88014653 MsG0480023642.01.T01:intron 25.0%
! TTCAAGGTAGTTAGAATTAA+AGG - Chr4:88014898-88014917 None:intergenic 25.0%
! TTCCAATTTGACATACAAAT+TGG + Chr4:88017536-88017555 MsG0480023642.01.T01:intron 25.0%
! TTCCAATTTGTATGTCAAAT+TGG - Chr4:88017541-88017560 None:intergenic 25.0%
!! AATCCTTTATGTGATTTTCA+AGG - Chr4:88014914-88014933 None:intergenic 25.0%
!! AGGATAGAATTAAGATTTTG+AGG + Chr4:88016890-88016909 MsG0480023642.01.T01:intron 25.0%
!! ATGCTTATGTTTTCATTTAC+TGG - Chr4:88017504-88017523 None:intergenic 25.0%
!! GAAATATCAGTAAAGCATTA+AGG - Chr4:88019149-88019168 None:intergenic 25.0%
!! GGATAGAATTAAGATTTTGA+GGG + Chr4:88016891-88016910 MsG0480023642.01.T01:intron 25.0%
!! TAAAGTACTAGTATGTAACA+AGG - Chr4:88014532-88014551 None:intergenic 25.0%
!! TAAATGTTTTACAGGAAAGT+GGG - Chr4:88019892-88019911 None:intergenic 25.0%
!! TAACTTTGGAAAGATTAATC+TGG + Chr4:88018846-88018865 MsG0480023642.01.T01:intron 25.0%
!! TTAAATGTTTTACAGGAAAG+TGG - Chr4:88019893-88019912 None:intergenic 25.0%
!! TTATTTTCTGTGATGTTTGA+AGG + Chr4:88018607-88018626 MsG0480023642.01.T01:intron 25.0%
!! TTTTATAGACATTAATCTCC+TGG - Chr4:88016517-88016536 None:intergenic 25.0%
!! TTTTGTTCAGTCAATACAAT+TGG + Chr4:88018132-88018151 MsG0480023642.01.T01:intron 25.0%
!!! AAACTAGTTTTGACAACAAA+TGG + Chr4:88019645-88019664 MsG0480023642.01.T01:three_prime_UTR 25.0%
!!! ACATATGATTTTGATAAGGT+GGG + Chr4:88016422-88016441 MsG0480023642.01.T01:intron 25.0%
!!! CACTACATATGATTTTGATA+AGG + Chr4:88016418-88016437 MsG0480023642.01.T01:intron 25.0%
!!! GATTTACTATTTCTGTTGTA+TGG + Chr4:88016596-88016615 MsG0480023642.01.T01:intron 25.0%
!!! TACATATGATTTTGATAAGG+TGG + Chr4:88016421-88016440 MsG0480023642.01.T01:intron 25.0%
!!! TGTATGTATTGCTTTTACAT+AGG + Chr4:88020290-88020309 MsG0480023642.01.T01:three_prime_UTR 25.0%
!!! TTCTAGTTTGGATAACTTTT+CGG + Chr4:88019619-88019638 MsG0480023642.01.T01:three_prime_UTR 25.0%
!!! TTGGAAGTTACTTTTCAATA+TGG + Chr4:88016330-88016349 MsG0480023642.01.T01:intron 25.0%
!!! TTTATGTTTTGGATTTTTGC+CGG - Chr4:88013784-88013803 None:intergenic 25.0%
!!! TTTTCTTTGAGCTTTAAACA+GGG + Chr4:88016729-88016748 MsG0480023642.01.T01:intron 25.0%
!!! TTTTGGATATCACTTTTGTT+TGG + Chr4:88019484-88019503 MsG0480023642.01.T01:CDS 25.0%
!!! TTTTTCTTTGAGCTTTAAAC+AGG + Chr4:88016728-88016747 MsG0480023642.01.T01:intron 25.0%
!!! TTTTTGTTGTGTAGTTGAAT+AGG + Chr4:88016455-88016474 MsG0480023642.01.T01:intron 25.0%
AACAATGTGACGGTTAATAA+TGG - Chr4:88014865-88014884 None:intergenic 30.0%
AACACCGTTTGACAAAAAAT+TGG + Chr4:88018273-88018292 MsG0480023642.01.T01:intron 30.0%
AACTCATCACTGAACTTAAA+GGG - Chr4:88016811-88016830 None:intergenic 30.0%
AAGAAATCACAACCACAATT+GGG - Chr4:88016079-88016098 None:intergenic 30.0%
ACACAATCCATAAATGGAAA+TGG + Chr4:88015310-88015329 MsG0480023642.01.T01:CDS 30.0%
ACACAGATGAATTGAAATTG+TGG + Chr4:88015560-88015579 MsG0480023642.01.T01:intron 30.0%
AGCCTGTAAGTAGTATAATA+CGG - Chr4:88017114-88017133 None:intergenic 30.0%
ATTATGGATATTTGAACTCC+AGG + Chr4:88018883-88018902 MsG0480023642.01.T01:intron 30.0%
ATTGGAAATGGAAATGGAAA+TGG - Chr4:88013907-88013926 None:intergenic 30.0%
ATTTGGAAGTTGTTTGTGTA+TGG - Chr4:88015500-88015519 None:intergenic 30.0%
CAAGTGATTATTCATCTCTT+AGG - Chr4:88016394-88016413 None:intergenic 30.0%
CACTCTTTAAGCACTTTAAA+TGG + Chr4:88019724-88019743 MsG0480023642.01.T01:three_prime_UTR 30.0%
CATCAAATCAACAGCAAAAA+TGG + Chr4:88013812-88013831 MsG0480023642.01.T01:five_prime_UTR 30.0%
CTACCTTGAAAATCACATAA+AGG + Chr4:88014908-88014927 MsG0480023642.01.T01:intron 30.0%
CTAGGATCTAATCTGATTAA+AGG - Chr4:88018364-88018383 None:intergenic 30.0%
CTCTACATGTTATAAAGAGA+AGG - Chr4:88015234-88015253 None:intergenic 30.0%
CTCTTTAAGCACTTTAAATG+GGG + Chr4:88019726-88019745 MsG0480023642.01.T01:three_prime_UTR 30.0%
GAAAGACTGTGTGATTATTT+AGG - Chr4:88017365-88017384 None:intergenic 30.0%
GACGAGGATATATATACATA+GGG + Chr4:88019678-88019697 MsG0480023642.01.T01:three_prime_UTR 30.0%
GATGATATACGAGTGAATAT+TGG - Chr4:88014264-88014283 None:intergenic 30.0%
GCTGAACTTAGTAAATGAAT+TGG + Chr4:88018643-88018662 MsG0480023642.01.T01:intron 30.0%
GGTTTATTCTGTGGTTATTA+TGG + Chr4:88018867-88018886 MsG0480023642.01.T01:intron 30.0%
GTAGATTCTAATGCAAAACA+AGG - Chr4:88017341-88017360 None:intergenic 30.0%
GTAGATTCTTATGCAAAAGA+AGG - Chr4:88017390-88017409 None:intergenic 30.0%
GTATGACAATTGTCACTATT+AGG + Chr4:88014367-88014386 MsG0480023642.01.T01:intron 30.0%
TAAAAAACAAACAGCACATG+AGG - Chr4:88018774-88018793 None:intergenic 30.0%
TAACATCTTCAACAATGTGA+CGG - Chr4:88014875-88014894 None:intergenic 30.0%
TCAGACTCAAAAAGAAATGT+AGG + Chr4:88019305-88019324 MsG0480023642.01.T01:CDS 30.0%
TCTGATGCTATTAACAATGA+AGG + Chr4:88015987-88016006 MsG0480023642.01.T01:CDS 30.0%
TCTGTTACGCGTTTATTAAA+TGG + Chr4:88017940-88017959 MsG0480023642.01.T01:intron 30.0%
TGACGAGGATATATATACAT+AGG + Chr4:88019677-88019696 MsG0480023642.01.T01:three_prime_UTR 30.0%
TGTAAGTAGTATAATACGGT+CGG - Chr4:88017110-88017129 None:intergenic 30.0%
TTCAGCTATTGATGTTTCAA+GGG + Chr4:88015746-88015765 MsG0480023642.01.T01:CDS 30.0%
TTTCAGCTATTGATGTTTCA+AGG + Chr4:88015745-88015764 MsG0480023642.01.T01:CDS 30.0%
TTTGGAAGTTGTTTGTGTAT+GGG - Chr4:88015499-88015518 None:intergenic 30.0%
! AGAGATGAAGTTGAAGATTT+TGG - Chr4:88017303-88017322 None:intergenic 30.0%
! ATATGTTCCAACCTTTTCTT+GGG + Chr4:88018302-88018321 MsG0480023642.01.T01:intron 30.0%
! ATGCATCACGTTTTATGTTT+TGG - Chr4:88013795-88013814 None:intergenic 30.0%
! GATTAATCTGGTTTATTCTG+TGG + Chr4:88018858-88018877 MsG0480023642.01.T01:intron 30.0%
! TAGTTCGTTATCTTCTAGTT+TGG + Chr4:88019607-88019626 MsG0480023642.01.T01:three_prime_UTR 30.0%
! TATATGTTCCAACCTTTTCT+TGG + Chr4:88018301-88018320 MsG0480023642.01.T01:intron 30.0%
! TTTGGAATTATAGTACCAGT+AGG + Chr4:88019502-88019521 MsG0480023642.01.T01:exon 30.0%
! TTTTAGCATTCAGAATGATG+TGG + Chr4:88016768-88016787 MsG0480023642.01.T01:intron 30.0%
!! AACCTTTATGTTACTTTCCT+TGG + Chr4:88018397-88018416 MsG0480023642.01.T01:intron 30.0%
!! ATTCTTGGCTTTTGATAACA+AGG + Chr4:88015064-88015083 MsG0480023642.01.T01:intron 30.0%
!! ATTTGTTTTCCTTTCCTTGA+GGG + Chr4:88016131-88016150 MsG0480023642.01.T01:intron 30.0%
!! CTTTGGATATCACTTTTGTT+TGG + Chr4:88019555-88019574 MsG0480023642.01.T01:three_prime_UTR 30.0%
!! GTGAATTTTAATGCGTTAAC+AGG + Chr4:88015861-88015880 MsG0480023642.01.T01:CDS 30.0%
!! TATTTGTTTTCCTTTCCTTG+AGG + Chr4:88016130-88016149 MsG0480023642.01.T01:intron 30.0%
!! TGTTTTGAATATGAAAGTCC+AGG + Chr4:88017464-88017483 MsG0480023642.01.T01:intron 30.0%
!! TTTCTTTGAGCTTTAAACAG+GGG + Chr4:88016730-88016749 MsG0480023642.01.T01:intron 30.0%
!!! AGCCGTTGATTTTCATTAAA+AGG - Chr4:88019817-88019836 None:intergenic 30.0%
!!! TCTTTTAGTTTGGACAACTT+TGG + Chr4:88019538-88019557 MsG0480023642.01.T01:three_prime_UTR 30.0%
AAAACGTTAGATCCAATGCA+TGG - Chr4:88018435-88018454 None:intergenic 35.0%
AAATATGGGCTTGGATAGTT+GGG - Chr4:88017170-88017189 None:intergenic 35.0%
AACAAAGAATGGTGAAGATG+AGG - Chr4:88017448-88017467 None:intergenic 35.0%
AATTCTGTAGAGCGAAACAA+TGG - Chr4:88016178-88016197 None:intergenic 35.0%
ACAAAAACGACGAATCAGAT+GGG + Chr4:88017719-88017738 MsG0480023642.01.T01:intron 35.0%
ACAAATTTCGCAAGTTGTGA+TGG + Chr4:88017869-88017888 MsG0480023642.01.T01:intron 35.0%
ACACGTAAAGGAGAAAAGAA+AGG - Chr4:88015189-88015208 None:intergenic 35.0%
ACGAGAGTAAGCAATAATCA+TGG - Chr4:88018253-88018272 None:intergenic 35.0%
ACGTAAAGGAGAAAAGAAAG+GGG - Chr4:88015187-88015206 None:intergenic 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG + Chr4:88014129-88014148 MsG0480023642.01.T01:CDS 35.0%
AGAATGATGTGGTCAACTAA+CGG + Chr4:88016779-88016798 MsG0480023642.01.T01:intron 35.0%
AGTGGAATTGGAAATGGAAA+TGG - Chr4:88013913-88013932 None:intergenic 35.0%
ATCTAAAGACAAAGTTCCGA+AGG + Chr4:88016039-88016058 MsG0480023642.01.T01:intron 35.0%
ATCTGTTATGCATAAGTGTG+TGG + Chr4:88015462-88015481 MsG0480023642.01.T01:CDS 35.0%
ATGCATTGTTCTGCAAAATG+AGG - Chr4:88017919-88017938 None:intergenic 35.0%
ATTCATCAGTATGTGACCTA+TGG - Chr4:88016569-88016588 None:intergenic 35.0%
ATTGTTAGGATGGAGCAAAA+AGG - Chr4:88018966-88018985 None:intergenic 35.0%
ATTTGCGATGAGCAAAAAGT+TGG + Chr4:88019074-88019093 MsG0480023642.01.T01:intron 35.0%
CAAACAACTTCCAAATCGTA+AGG + Chr4:88015504-88015523 MsG0480023642.01.T01:CDS 35.0%
CAAATTTCGCAAGTTGTGAT+GGG + Chr4:88017870-88017889 MsG0480023642.01.T01:intron 35.0%
CAACTGCGAAATTTGATGTT+GGG + Chr4:88019342-88019361 MsG0480023642.01.T01:CDS 35.0%
CAACTTATTAATGTCTCTGC+AGG + Chr4:88014437-88014456 MsG0480023642.01.T01:intron 35.0%
CAAGAAATCACAACCACAAT+TGG - Chr4:88016080-88016099 None:intergenic 35.0%
CAAGCTTCCATTTCCATTTA+TGG - Chr4:88015320-88015339 None:intergenic 35.0%
CACGTAAAGGAGAAAAGAAA+GGG - Chr4:88015188-88015207 None:intergenic 35.0%
CATACATAACCCAGTTTAGA+TGG - Chr4:88016545-88016564 None:intergenic 35.0%
CATTGTTAATAGCATCAGAG+CGG - Chr4:88015986-88016005 None:intergenic 35.0%
CTAGAAGATAACGAACTACA+CGG - Chr4:88019605-88019624 None:intergenic 35.0%
CTCAAAAAGAAATGTAGGCA+CGG + Chr4:88019310-88019329 MsG0480023642.01.T01:CDS 35.0%
CTGAATCTCACAACAAACAA+TGG + Chr4:88013935-88013954 MsG0480023642.01.T01:five_prime_UTR 35.0%
CTGGATTTCAAATTCAATCC+TGG - Chr4:88017485-88017504 None:intergenic 35.0%
GAAACTATAAAACAGCTCTC+TGG - Chr4:88015419-88015438 None:intergenic 35.0%
GAACTCATCACTGAACTTAA+AGG - Chr4:88016812-88016831 None:intergenic 35.0%
GACATCACACAATCCATAAA+TGG + Chr4:88015304-88015323 MsG0480023642.01.T01:CDS 35.0%
GACCGTATTATACTACTTAC+AGG + Chr4:88017109-88017128 MsG0480023642.01.T01:intron 35.0%
GACGACGAAAAAACAACAAA+TGG - Chr4:88020160-88020179 None:intergenic 35.0%
GATAACTATACACAACCTAC+TGG - Chr4:88019520-88019539 None:intergenic 35.0%
GTAAGTAGTATAATACGGTC+GGG - Chr4:88017109-88017128 None:intergenic 35.0%
GTTTAAGTGAAATATGGGCT+TGG - Chr4:88017179-88017198 None:intergenic 35.0%
TAAGCACTTTAAATGGGGAA+TGG + Chr4:88019731-88019750 MsG0480023642.01.T01:three_prime_UTR 35.0%
TACAGTTGTGCATCTATATC+CGG + Chr4:88013762-88013781 MsG0480023642.01.T01:five_prime_UTR 35.0%
TATGACACCTACTGAATTGA+AGG + Chr4:88017990-88018009 MsG0480023642.01.T01:intron 35.0%
TCAATATAGATGGTGTTCAC+TGG - Chr4:88019949-88019968 None:intergenic 35.0%
TCATTATAACCCTCAAGGAA+AGG - Chr4:88016143-88016162 None:intergenic 35.0%
TCCTGACAAAAAAACAACTC+TGG - Chr4:88015286-88015305 None:intergenic 35.0%
TCTAATGCAAAACAAGGTCA+GGG - Chr4:88017335-88017354 None:intergenic 35.0%
TCTGGAAATCAGAAATGGAA+AGG - Chr4:88015268-88015287 None:intergenic 35.0%
TGAAGTCATTATAACCCTCA+AGG - Chr4:88016148-88016167 None:intergenic 35.0%
TGAGAGAGAATGAAAGAGTT+TGG - Chr4:88017240-88017259 None:intergenic 35.0%
TGCCAAGGAAAGTAACATAA+AGG - Chr4:88018402-88018421 None:intergenic 35.0%
TGGATAGTTGGGTTAATCAT+GGG - Chr4:88017159-88017178 None:intergenic 35.0%
TTATGCATAACAGATTCTGC+AGG - Chr4:88015457-88015476 None:intergenic 35.0%
TTCATGGATGCATCATTCTA+GGG + Chr4:88018472-88018491 MsG0480023642.01.T01:intron 35.0%
TTCTAATGCAAAACAAGGTC+AGG - Chr4:88017336-88017355 None:intergenic 35.0%
TTCTACTATGCTTCTGGATA+AGG + Chr4:88017133-88017152 MsG0480023642.01.T01:intron 35.0%
TTGGAAGTTGTTTGTGTATG+GGG - Chr4:88015498-88015517 None:intergenic 35.0%
TTGGATAGTTGGGTTAATCA+TGG - Chr4:88017160-88017179 None:intergenic 35.0%
TTGTTCAGAAAACTCGTCAA+CGG + Chr4:88015634-88015653 MsG0480023642.01.T01:intron 35.0%
TTTCATGGATGCATCATTCT+AGG + Chr4:88018471-88018490 MsG0480023642.01.T01:intron 35.0%
! ACAACTCTGGAAATCAGAAA+TGG - Chr4:88015273-88015292 None:intergenic 35.0%
! ACCTTGATAATTGCGACATA+CGG - Chr4:88014504-88014523 None:intergenic 35.0%
! AGAATTCCAAGTCTTTTGTC+TGG + Chr4:88016192-88016211 MsG0480023642.01.T01:CDS 35.0%
! AGGAATATATCACGTTGACT+CGG - Chr4:88014699-88014718 None:intergenic 35.0%
! CACGTTCTTTCTAGTAACTT+TGG + Chr4:88018832-88018851 MsG0480023642.01.T01:intron 35.0%
! CAGAACACACTTTAGAAAAC+TGG + Chr4:88018706-88018725 MsG0480023642.01.T01:intron 35.0%
! CTAGTCTTTAATCTCAAGGT+TGG + Chr4:88016311-88016330 MsG0480023642.01.T01:intron 35.0%
! TAGTTTGGATAACTTTTCGG+TGG + Chr4:88019622-88019641 MsG0480023642.01.T01:three_prime_UTR 35.0%
! TATGTTCCAACCTTTTCTTG+GGG + Chr4:88018303-88018322 MsG0480023642.01.T01:intron 35.0%
! TCCTTTTCCAGAAAACCTAA+CGG - Chr4:88014197-88014216 None:intergenic 35.0%
! TTCTTTTCTCCTTTACGTGT+GGG + Chr4:88015189-88015208 MsG0480023642.01.T01:intron 35.0%
! TTTCTTTTCTCCTTTACGTG+TGG + Chr4:88015188-88015207 MsG0480023642.01.T01:intron 35.0%
!! ACAGCTAGTCTTTAATCTCA+AGG + Chr4:88016307-88016326 MsG0480023642.01.T01:CDS 35.0%
!! TAGCTTCCATGTTTTGTTCT+TGG + Chr4:88015002-88015021 MsG0480023642.01.T01:intron 35.0%
!! TATGTTACTTTCCTTGGCAA+TGG + Chr4:88018403-88018422 MsG0480023642.01.T01:intron 35.0%
!! TTCTTTGAGCTTTAAACAGG+GGG + Chr4:88016731-88016750 MsG0480023642.01.T01:intron 35.0%
!! TTTTGAGTCTGATGCATCTA+AGG - Chr4:88019297-88019316 None:intergenic 35.0%
!!! AAACTGGCGTGTTTTAGAAA+AGG + Chr4:88018722-88018741 MsG0480023642.01.T01:intron 35.0%
!!! AGATTTTGAGGGCTGTTTTT+CGG + Chr4:88016902-88016921 MsG0480023642.01.T01:intron 35.0%
!!! AGGAGGAGTATTCTATCTTT+TGG + Chr4:88019467-88019486 MsG0480023642.01.T01:CDS 35.0%
!!! ATCTGATTCGTCGTTTTTGT+CGG - Chr4:88017719-88017738 None:intergenic 35.0%
!!! CGTGTTTTAGAAAAGGATAG+GGG + Chr4:88018729-88018748 MsG0480023642.01.T01:intron 35.0%
!!! GCGTGTTTTAGAAAAGGATA+GGG + Chr4:88018728-88018747 MsG0480023642.01.T01:intron 35.0%
!!! GTATGCTGTTTGTTTTGCAT+TGG + Chr4:88014657-88014676 MsG0480023642.01.T01:intron 35.0%
!!! GTGTTTTAGAAAAGGATAGG+GGG + Chr4:88018730-88018749 MsG0480023642.01.T01:intron 35.0%
!!! TCCAGAGTTGTTTTTTTGTC+AGG + Chr4:88015282-88015301 MsG0480023642.01.T01:intron 35.0%
AAAAAGGACCTGCATTTGTG+TGG - Chr4:88018950-88018969 None:intergenic 40.0%
AACCAAGAACAGTCTGCAAT+AGG - Chr4:88017832-88017851 None:intergenic 40.0%
ACCAAGAACAGTCTGCAATA+GGG - Chr4:88017831-88017850 None:intergenic 40.0%
ACTGGGTTATGTATGTCCAT+AGG + Chr4:88016550-88016569 MsG0480023642.01.T01:intron 40.0%
AGCTATTGATGTTTCAAGGG+AGG + Chr4:88015749-88015768 MsG0480023642.01.T01:CDS 40.0%
AGGATATGCTGACCGATATA+TGG + Chr4:88019117-88019136 MsG0480023642.01.T01:intron 40.0%
ATGGATATTTGAACTCCAGG+AGG + Chr4:88018886-88018905 MsG0480023642.01.T01:intron 40.0%
ATTTGATGTTGGGAAGAAGC+TGG + Chr4:88019352-88019371 MsG0480023642.01.T01:CDS 40.0%
CCAGACGAAGCAGAAAAAAA+GGG + Chr4:88015367-88015386 MsG0480023642.01.T01:CDS 40.0%
CTTATTAATGTCTCTGCAGG+AGG + Chr4:88014440-88014459 MsG0480023642.01.T01:intron 40.0%
CTTCGATGTTTCATCTTTCC+TGG - Chr4:88019429-88019448 None:intergenic 40.0%
GAAATATGGGCTTGGATAGT+TGG - Chr4:88017171-88017190 None:intergenic 40.0%
GACAAAAACGACGAATCAGA+TGG + Chr4:88017718-88017737 MsG0480023642.01.T01:intron 40.0%
GACGGCAACATCAATATAGA+TGG - Chr4:88019959-88019978 None:intergenic 40.0%
GAGAATGAAAGAGTTTGGAC+TGG - Chr4:88017235-88017254 None:intergenic 40.0%
GCAACTGCGAAATTTGATGT+TGG + Chr4:88019341-88019360 MsG0480023642.01.T01:CDS 40.0%
GTGGTTGTGATTTCTTGTGT+GGG + Chr4:88016083-88016102 MsG0480023642.01.T01:intron 40.0%
GTTTCATCTTTCCTGGAAAC+AGG - Chr4:88019422-88019441 None:intergenic 40.0%
TCAGAGAGTGGAATTGGAAA+TGG - Chr4:88013919-88013938 None:intergenic 40.0%
TCAGCAGTACGTTAATTCGT+TGG + Chr4:88018499-88018518 MsG0480023642.01.T01:intron 40.0%
TCATGTTGTTGAGTCTGAAG+AGG - Chr4:88017277-88017296 None:intergenic 40.0%
TCCAGACGAAGCAGAAAAAA+AGG + Chr4:88015366-88015385 MsG0480023642.01.T01:CDS 40.0%
TGAAGGCAATGACAAAGTGT+AGG + Chr4:88016004-88016023 MsG0480023642.01.T01:intron 40.0%
TGAGATTCAGAGAGTGGAAT+TGG - Chr4:88013925-88013944 None:intergenic 40.0%
TGATGCTCTGTGGTAATAAC+TGG - Chr4:88015831-88015850 None:intergenic 40.0%
TGGATATTTGAACTCCAGGA+GGG + Chr4:88018887-88018906 MsG0480023642.01.T01:intron 40.0%
TGGTTTATCACGGTTTGACA+GGG - Chr4:88017664-88017683 None:intergenic 40.0%
TGTAGTGTTGTGCTCATTCT+TGG + Chr4:88015049-88015068 MsG0480023642.01.T01:intron 40.0%
TGTGGTTGTGATTTCTTGTG+TGG + Chr4:88016082-88016101 MsG0480023642.01.T01:intron 40.0%
TTAAGGCGCAGACCATATAT+CGG - Chr4:88019132-88019151 None:intergenic 40.0%
TTATAGTTTCCACCGAGATG+AGG + Chr4:88015429-88015448 MsG0480023642.01.T01:CDS 40.0%
TTATCGTTGAAGCGGTTTGT+CGG - Chr4:88017696-88017715 None:intergenic 40.0%
TTCTTCTTCTTCTTCTTCGC+TGG - Chr4:88014125-88014144 None:intergenic 40.0%
TTGGTTTATCACGGTTTGAC+AGG - Chr4:88017665-88017684 None:intergenic 40.0%
TTGTTGTGAGATTCAGAGAG+TGG - Chr4:88013931-88013950 None:intergenic 40.0%
! AATGAAAGAGTTTGGACTGG+CGG - Chr4:88017232-88017251 None:intergenic 40.0%
! AATGGAAGCTTGATGATCAC+AGG + Chr4:88015328-88015347 MsG0480023642.01.T01:CDS 40.0%
! ATGGAAGCTTGATGATCACA+GGG + Chr4:88015329-88015348 MsG0480023642.01.T01:CDS 40.0%
! ATGTTCCAACCTTTTCTTGG+GGG + Chr4:88018304-88018323 MsG0480023642.01.T01:intron 40.0%
! CCTTTTCCAGAAAACCTAAC+GGG - Chr4:88014196-88014215 None:intergenic 40.0%
! CGGCTTTTGATCTTTAACCT+CGG - Chr4:88014484-88014503 None:intergenic 40.0%
! CTTCTTGAAGTACCCAATTG+TGG + Chr4:88016064-88016083 MsG0480023642.01.T01:intron 40.0%
! GACAGCGCTGAAAAACATTA+AGG - Chr4:88016364-88016383 None:intergenic 40.0%
! GGCTTTTGATCTTTAACCTC+GGG - Chr4:88014483-88014502 None:intergenic 40.0%
! TCTTTTCTCCTTTACGTGTG+GGG + Chr4:88015190-88015209 MsG0480023642.01.T01:intron 40.0%
! TTGAGATAGTTGGGTTTGGT+TGG + Chr4:88017034-88017053 MsG0480023642.01.T01:intron 40.0%
! TTTGTCGGTTATCGTTGAAG+CGG - Chr4:88017704-88017723 None:intergenic 40.0%
! TTTTGATAAGGTGGGACAGT+GGG + Chr4:88016430-88016449 MsG0480023642.01.T01:intron 40.0%
!! AAATGGATGTTGACTTGACG+AGG + Chr4:88019662-88019681 MsG0480023642.01.T01:three_prime_UTR 40.0%
!! AGACTAGCTGTCGTAACTTT+TGG - Chr4:88016298-88016317 None:intergenic 40.0%
!! AGGTTTTCTGGAAAAGGAAG+AGG + Chr4:88014199-88014218 MsG0480023642.01.T01:CDS 40.0%
!! AGTTTCAAGACGTGCTGATT+AGG + Chr4:88019447-88019466 MsG0480023642.01.T01:CDS 40.0%
!! ATTGGTCTTGTCAGATTCAC+GGG - Chr4:88019384-88019403 None:intergenic 40.0%
!! ATTTTGATAAGGTGGGACAG+TGG + Chr4:88016429-88016448 MsG0480023642.01.T01:intron 40.0%
!! CATTGGTCTTGTCAGATTCA+CGG - Chr4:88019385-88019404 None:intergenic 40.0%
!! GACTAGCTGTCGTAACTTTT+GGG - Chr4:88016297-88016316 None:intergenic 40.0%
!! GGTACTTCAAGAAGTACCTT+CGG - Chr4:88016058-88016077 None:intergenic 40.0%
!! TAAAGTGCTTAAAGAGTGCC+CGG - Chr4:88019722-88019741 None:intergenic 40.0%
!! TCCTGCGCTTTTTATGACTT+CGG + Chr4:88019185-88019204 MsG0480023642.01.T01:intron 40.0%
!! TCTAACGGGTTGAGATAGTT+GGG + Chr4:88017025-88017044 MsG0480023642.01.T01:intron 40.0%
!! TGTTGTTGCGTGCTATTTGT+TGG + Chr4:88019998-88020017 MsG0480023642.01.T01:three_prime_UTR 40.0%
!! TTTGGTTGGATAGTGTTGGT+CGG + Chr4:88017048-88017067 MsG0480023642.01.T01:intron 40.0%
!!! CTGAATGTTGGCTTTTCTAC+TGG + Chr4:88019022-88019041 MsG0480023642.01.T01:intron 40.0%
!!! GATTTTGAGGGCTGTTTTTC+GGG + Chr4:88016903-88016922 MsG0480023642.01.T01:intron 40.0%
!!! GGCGTGTTTTAGAAAAGGAT+AGG + Chr4:88018727-88018746 MsG0480023642.01.T01:intron 40.0%
!!! TTTTTTCTGCTTCGTCTGGA+CGG - Chr4:88015366-88015385 None:intergenic 40.0%
AAAAAAAGGGAGGTGGTAGC+TGG + Chr4:88015380-88015399 MsG0480023642.01.T01:CDS 45.0%
AAAAATGAAGCCGAGTGACG+AGG + Chr4:88014072-88014091 MsG0480023642.01.T01:exon 45.0%
AAATTTCGCAGTTGCCCATG+GGG - Chr4:88019336-88019355 None:intergenic 45.0%
ACAGGCTTCTACTATGCTTC+TGG + Chr4:88017127-88017146 MsG0480023642.01.T01:intron 45.0%
ACGAATCAGATGGGCGAAAA+TGG + Chr4:88017728-88017747 MsG0480023642.01.T01:intron 45.0%
ACGTTAGATCCAATGCATGG+TGG - Chr4:88018432-88018451 None:intergenic 45.0%
AGGCGGCATAAAGATGTCAT+TGG - Chr4:88019402-88019421 None:intergenic 45.0%
ATCTGGCCAGACAAAAGACT+TGG - Chr4:88016201-88016220 None:intergenic 45.0%
ATGAGCAAAAAGTTGGCGTG+AGG + Chr4:88019081-88019100 MsG0480023642.01.T01:intron 45.0%
ATGATGTGGTCAACTAACGG+TGG + Chr4:88016782-88016801 MsG0480023642.01.T01:intron 45.0%
ATGGATGTTGCAACAGAGAG+AGG - Chr4:88020141-88020160 None:intergenic 45.0%
ATGGGTTTAGCGTCTTCAAC+TGG - Chr4:88014166-88014185 None:intergenic 45.0%
ATTAGTACACTGTCTGTGCG+TGG + Chr4:88013870-88013889 MsG0480023642.01.T01:five_prime_UTR 45.0%
ATTCTGCAGGAACCTCATCT+CGG - Chr4:88015444-88015463 None:intergenic 45.0%
ATTGCCTGACAGGAGAAAAC+TGG - Chr4:88019779-88019798 None:intergenic 45.0%
CAAATCGTAAGGTACATCCC+GGG + Chr4:88015515-88015534 MsG0480023642.01.T01:intron 45.0%
CAAATTTCGCAGTTGCCCAT+GGG - Chr4:88019337-88019356 None:intergenic 45.0%
CACGTGCCAAGAACAAAACA+TGG - Chr4:88015011-88015030 None:intergenic 45.0%
CAGAAAACTCGTCAACGGTT+GGG + Chr4:88015639-88015658 MsG0480023642.01.T01:intron 45.0%
CCAAATCGTAAGGTACATCC+CGG + Chr4:88015514-88015533 MsG0480023642.01.T01:intron 45.0%
CGAATCAGATGGGCGAAAAT+GGG + Chr4:88017729-88017748 MsG0480023642.01.T01:intron 45.0%
CTGGACAGAATCAGCAAAAC+CGG + Chr4:88016940-88016959 MsG0480023642.01.T01:intron 45.0%
GAAGCAGAAAAAAAGGGAGG+TGG + Chr4:88015373-88015392 MsG0480023642.01.T01:CDS 45.0%
GACGAAGCAGAAAAAAAGGG+AGG + Chr4:88015370-88015389 MsG0480023642.01.T01:CDS 45.0%
GATACACACGATGTGAATCG+AGG - Chr4:88016855-88016874 None:intergenic 45.0%
GCCGTATGTCGCAATTATCA+AGG + Chr4:88014500-88014519 MsG0480023642.01.T01:CDS 45.0%
GCTTCATCAGTCTTGATGTC+AGG - Chr4:88015672-88015691 None:intergenic 45.0%
GTAATAACTGGACAACTCCC+TGG - Chr4:88015819-88015838 None:intergenic 45.0%
GTTGAAGACGCTAAACCCAT+TGG + Chr4:88014166-88014185 MsG0480023642.01.T01:CDS 45.0%
TAGTATAATACGGTCGGGTG+TGG - Chr4:88017104-88017123 None:intergenic 45.0%
TCAAATTTCGCAGTTGCCCA+TGG - Chr4:88019338-88019357 None:intergenic 45.0%
TCAGAAAACTCGTCAACGGT+TGG + Chr4:88015638-88015657 MsG0480023642.01.T01:intron 45.0%
TCATCTTTCCTGGAAACAGG+CGG - Chr4:88019419-88019438 None:intergenic 45.0%
TGAGCAAAAAGTTGGCGTGA+GGG + Chr4:88019082-88019101 MsG0480023642.01.T01:intron 45.0%
TGTTGTCGTTGTGTGCTCTT+TGG + Chr4:88020021-88020040 MsG0480023642.01.T01:three_prime_UTR 45.0%
TTGACTGCTGAGGAAAATCC+AGG + Chr4:88018911-88018930 MsG0480023642.01.T01:intron 45.0%
TTTACGTGTGGGGACAGATA+GGG + Chr4:88015200-88015219 MsG0480023642.01.T01:intron 45.0%
TTTCAGTCCTTCGACTTCGA+TGG + Chr4:88014235-88014254 MsG0480023642.01.T01:CDS 45.0%
! AAACAGCTCTCTGGTGTCAA+CGG - Chr4:88015410-88015429 None:intergenic 45.0%
! ACCGAAGTCATAAAAAGCGC+AGG - Chr4:88019189-88019208 None:intergenic 45.0%
! ATCGGTTCAAACGGGTCTAA+CGG + Chr4:88017010-88017029 MsG0480023642.01.T01:intron 45.0%
! GTCGGTTCAATCGGTTCAAA+CGG + Chr4:88017001-88017020 MsG0480023642.01.T01:intron 45.0%
! TAATATGCGCTGATGCTCTG+TGG - Chr4:88015841-88015860 None:intergenic 45.0%
! TCGGTTCAATCGGTTCAAAC+GGG + Chr4:88017002-88017021 MsG0480023642.01.T01:intron 45.0%
! TGGGTTTGGTTGGATAGTGT+TGG + Chr4:88017044-88017063 MsG0480023642.01.T01:intron 45.0%
! TTTTGCTCTGCTTGTTCAGC+TGG + Chr4:88019214-88019233 MsG0480023642.01.T01:intron 45.0%
!! AAACCTAACGGGTTCACCAA+TGG - Chr4:88014185-88014204 None:intergenic 45.0%
!! AAAGTGCTTAAAGAGTGCCC+GGG - Chr4:88019721-88019740 None:intergenic 45.0%
!! AACCTAACGGGTTCACCAAT+GGG - Chr4:88014184-88014203 None:intergenic 45.0%
!! AATGGGGAATGGATTGTCTC+TGG + Chr4:88019742-88019761 MsG0480023642.01.T01:three_prime_UTR 45.0%
!! CCCGTTAGGTTTTCTGGAAA+AGG + Chr4:88014193-88014212 MsG0480023642.01.T01:CDS 45.0%
!! GATACGCGGTTGGTTTATCA+CGG - Chr4:88017674-88017693 None:intergenic 45.0%
!! GTCTAACGGGTTGAGATAGT+TGG + Chr4:88017024-88017043 MsG0480023642.01.T01:intron 45.0%
!! TGGATAGTGTTGGTCGGTTT+CGG + Chr4:88017054-88017073 MsG0480023642.01.T01:intron 45.0%
!! TTCAAGACGTGCTGATTAGG+AGG + Chr4:88019450-88019469 MsG0480023642.01.T01:CDS 45.0%
!! TTGGTCTTGTCAGATTCACG+GGG - Chr4:88019383-88019402 None:intergenic 45.0%
!!! CCCTTTTTTTCTGCTTCGTC+TGG - Chr4:88015370-88015389 None:intergenic 45.0%
!!! TTTTTCGGGCCTTGCAAACT+AGG + Chr4:88016917-88016936 MsG0480023642.01.T01:intron 45.0%
!! ATATATATATATATATATGT+TGG + Chr4:88014577-88014596 MsG0480023642.01.T01:intron 5.0%
AAATGTTAACGAGTGCCCCC+GGG + Chr4:88019701-88019720 MsG0480023642.01.T01:three_prime_UTR 50.0%
AACCCATTGGTGAACCCGTT+AGG + Chr4:88014179-88014198 MsG0480023642.01.T01:CDS 50.0%
ACAGCTGGAACAGCAACATC+TGG - Chr4:88016218-88016237 None:intergenic 50.0%
ACCTGCATTTGTGTGGCTCT+CGG - Chr4:88018943-88018962 None:intergenic 50.0%
ACCTTCTGCACTATGAACCC+GGG - Chr4:88015535-88015554 None:intergenic 50.0%
AGAACAGTCTGCAATAGGGC+TGG - Chr4:88017827-88017846 None:intergenic 50.0%
AGAGAGAGGACGTTAACCAC+CGG - Chr4:88020127-88020146 None:intergenic 50.0%
AGGAGATAGCCATCGTGACA+AGG + Chr4:88015881-88015900 MsG0480023642.01.T01:CDS 50.0%
ATCAGATGGGCGAAAATGGG+TGG + Chr4:88017732-88017751 MsG0480023642.01.T01:intron 50.0%
ATCGGTCAGCATATCCTGCA+CGG - Chr4:88019114-88019133 None:intergenic 50.0%
CAATGGTGACCACCATGCAT+TGG + Chr4:88018420-88018439 MsG0480023642.01.T01:intron 50.0%
CACCTTCTGCACTATGAACC+CGG - Chr4:88015536-88015555 None:intergenic 50.0%
CACGCAACAACAACGTCAAC+TGG - Chr4:88019990-88020009 None:intergenic 50.0%
CAGCTGGAATGCATAGCTTG+TGG + Chr4:88019230-88019249 MsG0480023642.01.T01:intron 50.0%
CCGGGATGTACCTTACGATT+TGG - Chr4:88015517-88015536 None:intergenic 50.0%
CTATCTGTCCCCACACGTAA+AGG - Chr4:88015201-88015220 None:intergenic 50.0%
CTTTACGTGTGGGGACAGAT+AGG + Chr4:88015199-88015218 MsG0480023642.01.T01:intron 50.0%
GAAATGTTAACGAGTGCCCC+CGG + Chr4:88019700-88019719 MsG0480023642.01.T01:three_prime_UTR 50.0%
GCACGTGCACATACTGGATT+TGG + Chr4:88015024-88015043 MsG0480023642.01.T01:intron 50.0%
GCCCTATTGCAGACTGTTCT+TGG + Chr4:88017827-88017846 MsG0480023642.01.T01:intron 50.0%
GGAGATAGCCATCGTGACAA+GGG + Chr4:88015882-88015901 MsG0480023642.01.T01:CDS 50.0%
GTGTTCCAGGTTTCAGAGAG+TGG - Chr4:88015797-88015816 None:intergenic 50.0%
GTTGTCTTCATCGTCGTCAC+TGG - Chr4:88013988-88014007 None:intergenic 50.0%
TAGCCATCGTGACAAGGGTT+TGG + Chr4:88015887-88015906 MsG0480023642.01.T01:CDS 50.0%
TCAGATGGGCGAAAATGGGT+GGG + Chr4:88017733-88017752 MsG0480023642.01.T01:intron 50.0%
TCGGTTCAAACGGGTCTAAC+GGG + Chr4:88017011-88017030 MsG0480023642.01.T01:intron 50.0%
TCTCGTGAGGGAAGAAGGTT+GGG - Chr4:88019869-88019888 None:intergenic 50.0%
TCTGCAATAGGGCTGGACAA+CGG - Chr4:88017820-88017839 None:intergenic 50.0%
TCTTTATGCCGCCTGTTTCC+AGG + Chr4:88019408-88019427 MsG0480023642.01.T01:CDS 50.0%
TGATGAAGCTGCTGCTGATC+AGG + Chr4:88015683-88015702 MsG0480023642.01.T01:CDS 50.0%
TGTTCCAGCTGTAGTTGCTC+TGG + Chr4:88016226-88016245 MsG0480023642.01.T01:CDS 50.0%
TTCTCCAGAGCAACTACAGC+TGG - Chr4:88016233-88016252 None:intergenic 50.0%
TTCTTGGCACGTGCACATAC+TGG + Chr4:88015018-88015037 MsG0480023642.01.T01:intron 50.0%
TTGGTCTCCATCGAAGTCGA+AGG - Chr4:88014245-88014264 None:intergenic 50.0%
! CGGGTTGAGATAGTTGGGTT+TGG + Chr4:88017030-88017049 MsG0480023642.01.T01:intron 50.0%
! GCATAGCTTGTGGTCATTCC+TGG + Chr4:88019240-88019259 MsG0480023642.01.T01:CDS 50.0%
! GGTGAACCCGTTAGGTTTTC+TGG + Chr4:88014187-88014206 MsG0480023642.01.T01:CDS 50.0%
! TCCAACCTTTTCTTGGGGGT+GGG + Chr4:88018308-88018327 MsG0480023642.01.T01:intron 50.0%
! TCTGTCCAGCCTAGTTTGCA+AGG - Chr4:88016929-88016948 None:intergenic 50.0%
! TTCCAACCTTTTCTTGGGGG+TGG + Chr4:88018307-88018326 MsG0480023642.01.T01:intron 50.0%
!! AAGTGCTTAAAGAGTGCCCG+GGG - Chr4:88019720-88019739 None:intergenic 50.0%
!! AGCTGTAGTTGCTCTGGAGA+AGG + Chr4:88016232-88016251 MsG0480023642.01.T01:CDS 50.0%
!! AGTCTCCACTCTCTGAAACC+TGG + Chr4:88015789-88015808 MsG0480023642.01.T01:CDS 50.0%
!! AGTGTTGGTCGGTTTCGGTT+GGG + Chr4:88017059-88017078 MsG0480023642.01.T01:intron 50.0%
!! CTCTGAAACCTGGAACACCA+GGG + Chr4:88015799-88015818 MsG0480023642.01.T01:CDS 50.0%
!! TAGTGTTGGTCGGTTTCGGT+TGG + Chr4:88017058-88017077 MsG0480023642.01.T01:intron 50.0%
!! TCTCTGAAACCTGGAACACC+AGG + Chr4:88015798-88015817 MsG0480023642.01.T01:CDS 50.0%
AAATGTAGGCACGGCCCCAT+GGG + Chr4:88019319-88019338 MsG0480023642.01.T01:CDS 55.0%
AACTCCCCACCCCCAAGAAA+AGG - Chr4:88018316-88018335 None:intergenic 55.0%
AAGGGCTGAGATTGCCTGAC+AGG - Chr4:88019789-88019808 None:intergenic 55.0%
AATAGGGCTGGACAACGGTC+GGG - Chr4:88017815-88017834 None:intergenic 55.0%
ACAGGAAAGTGGGTCTCGTG+AGG - Chr4:88019882-88019901 None:intergenic 55.0%
ACCACCGGTACCAGAGACAA+TGG - Chr4:88020112-88020131 None:intergenic 55.0%
ACTGGCGGCTAGGGTTTCTA+TGG - Chr4:88017217-88017236 None:intergenic 55.0%
AGGTTGGAAGGAGTCGGTTG+TGG - Chr4:88014014-88014033 None:intergenic 55.0%
CAATAGGGCTGGACAACGGT+CGG - Chr4:88017816-88017835 None:intergenic 55.0%
CAGGAAAGTGGGTCTCGTGA+GGG - Chr4:88019881-88019900 None:intergenic 55.0%
CATGGTGGTCACCATTGCCA+AGG - Chr4:88018417-88018436 None:intergenic 55.0%
CCTCGGAGGCAAAAGGAAGA+TGG + Chr4:88014031-88014050 MsG0480023642.01.T01:five_prime_UTR 55.0%
CCTGCATTTGTGTGGCTCTC+GGG - Chr4:88018942-88018961 None:intergenic 55.0%
CGTCAACTGGTAACACGCGA+CGG - Chr4:88019977-88019996 None:intergenic 55.0%
CGTGAGGGATATATCCGTGC+AGG + Chr4:88019097-88019116 MsG0480023642.01.T01:intron 55.0%
CTTCCAACCTCGGAGGCAAA+AGG + Chr4:88014024-88014043 MsG0480023642.01.T01:five_prime_UTR 55.0%
GAAGCGGTTTGTCGGATACG+CGG - Chr4:88017688-88017707 None:intergenic 55.0%
GCCTGACAGGAGAAAACTGG+AGG - Chr4:88019776-88019795 None:intergenic 55.0%
GGCTGAGAAGGAGGAAGAAG+AGG + Chr4:88014093-88014112 MsG0480023642.01.T01:CDS 55.0%
GTCGCCATTGTCTCTGGTAC+CGG + Chr4:88020105-88020124 MsG0480023642.01.T01:three_prime_UTR 55.0%
GTCGTAGTCGCCATTGTCTC+TGG + Chr4:88020099-88020118 MsG0480023642.01.T01:three_prime_UTR 55.0%
GTCTCGTGAGGGAAGAAGGT+TGG - Chr4:88019870-88019889 None:intergenic 55.0%
TCAGCAAAACCGGCCCAATC+CGG + Chr4:88016950-88016969 MsG0480023642.01.T01:intron 55.0%
TCCCGGGTTCATAGTGCAGA+AGG + Chr4:88015531-88015550 MsG0480023642.01.T01:intron 55.0%
TCCTTCTCAGCCTCGTCACT+CGG - Chr4:88014085-88014104 None:intergenic 55.0%
TCGCCAAACCCTTGTCACGA+TGG - Chr4:88015893-88015912 None:intergenic 55.0%
TTGGGGGTGGGGAGTTAGAA+GGG + Chr4:88018320-88018339 MsG0480023642.01.T01:intron 55.0%
! CAACCGACTCCTTCCAACCT+CGG + Chr4:88014014-88014033 MsG0480023642.01.T01:five_prime_UTR 55.0%
! CCAACCTTTTCTTGGGGGTG+GGG + Chr4:88018309-88018328 MsG0480023642.01.T01:intron 55.0%
! CCATCTTCCTTTTGCCTCCG+AGG - Chr4:88014034-88014053 None:intergenic 55.0%
! CTTCCTTTTGCCTCCGAGGT+TGG - Chr4:88014030-88014049 None:intergenic 55.0%
! CTTTTGCCTCCGAGGTTGGA+AGG - Chr4:88014026-88014045 None:intergenic 55.0%
! GCCTCCAGTTTTCTCCTGTC+AGG + Chr4:88019772-88019791 MsG0480023642.01.T01:three_prime_UTR 55.0%
! GCTTGATGATCACAGGGCAG+TGG + Chr4:88015335-88015354 MsG0480023642.01.T01:CDS 55.0%
!! AAGAGTTTGGACTGGCGGCT+AGG - Chr4:88017227-88017246 None:intergenic 55.0%
!! AGAGTTTGGACTGGCGGCTA+GGG - Chr4:88017226-88017245 None:intergenic 55.0%
!! AGTGCTTAAAGAGTGCCCGG+GGG - Chr4:88019719-88019738 None:intergenic 55.0%
AATCCGCCGCAAACCACGGT+TGG - Chr4:88017765-88017784 None:intergenic 60.0%
ATCCGCCGCAAACCACGGTT+GGG - Chr4:88017764-88017783 None:intergenic 60.0%
CACAGACACCGCATCACGAG+AGG - Chr4:88019270-88019289 None:intergenic 60.0%
CCAGGAGGGTTTGACTGCTG+AGG + Chr4:88018901-88018920 MsG0480023642.01.T01:intron 60.0%
CCCCACCCCCAAGAAAAGGT+TGG - Chr4:88018312-88018331 None:intergenic 60.0%
CCCGAGAGCCACACAAATGC+AGG + Chr4:88018939-88018958 MsG0480023642.01.T01:intron 60.0%
CCTCAATCCGCCGCAAACCA+CGG - Chr4:88017769-88017788 None:intergenic 60.0%
CCTCAGCAGTCAAACCCTCC+TGG - Chr4:88018904-88018923 None:intergenic 60.0%
CCTCCGAGGTTGGAAGGAGT+CGG - Chr4:88014020-88014039 None:intergenic 60.0%
CGGTTTGTCGGATACGCGGT+TGG - Chr4:88017684-88017703 None:intergenic 60.0%
CTGCAGGAACCTCATCTCGG+TGG - Chr4:88015441-88015460 None:intergenic 60.0%
CTGGTCTGCCTCTCGTGATG+CGG + Chr4:88019259-88019278 MsG0480023642.01.T01:CDS 60.0%
CTTGGGGGTGGGGAGTTAGA+AGG + Chr4:88018319-88018338 MsG0480023642.01.T01:intron 60.0%
GAAATGTAGGCACGGCCCCA+TGG + Chr4:88019318-88019337 MsG0480023642.01.T01:CDS 60.0%
GAGTGACGAGGCTGAGAAGG+AGG + Chr4:88014084-88014103 MsG0480023642.01.T01:CDS 60.0%
GCCATACGGGCCATACGGTT+CGG - Chr4:88016976-88016995 None:intergenic 60.0%
GGACAACTCCCTGGTGTTCC+AGG - Chr4:88015810-88015829 None:intergenic 60.0%
GTGGGTCTCGTGAGGGAAGA+AGG - Chr4:88019874-88019893 None:intergenic 60.0%
TCGGGCCTTGCAAACTAGGC+TGG + Chr4:88016921-88016940 MsG0480023642.01.T01:intron 60.0%
TGAACCGACCCGCTGCCATA+CGG - Chr4:88016990-88017009 None:intergenic 60.0%
TGGGGGTGGGGAGTTAGAAG+GGG + Chr4:88018321-88018340 MsG0480023642.01.T01:intron 60.0%
! ACCTCGGGCACAAGAAGCAC+AGG - Chr4:88014468-88014487 None:intergenic 60.0%
! ACGGTCGGGTGTGGTTTTCG+TGG - Chr4:88017095-88017114 None:intergenic 60.0%
! CCATACGGTTCGGCCGGATT+GGG - Chr4:88016966-88016985 None:intergenic 60.0%
! CCTCGGGCACAAGAAGCACA+GGG - Chr4:88014467-88014486 None:intergenic 60.0%
! CGGGTGTGGTTTTCGTGGGT+TGG - Chr4:88017090-88017109 None:intergenic 60.0%
! CGGTCGGGTGTGGTTTTCGT+GGG - Chr4:88017094-88017113 None:intergenic 60.0%
! GCCATTGTCTCTGGTACCGG+TGG + Chr4:88020108-88020127 MsG0480023642.01.T01:three_prime_UTR 60.0%
! TGGCAGCGGGTCGGTTCAAT+CGG + Chr4:88016992-88017011 MsG0480023642.01.T01:intron 60.0%
! TTCCCAACCGTGGTTTGCGG+CGG + Chr4:88017759-88017778 MsG0480023642.01.T01:intron 60.0%
CCCAATCCGGCCGAACCGTA+TGG + Chr4:88016963-88016982 MsG0480023642.01.T01:intron 65.0%
CCCTGTGCTTCTTGTGCCCG+AGG + Chr4:88014464-88014483 MsG0480023642.01.T01:CDS 65.0%
CCGACTCCTTCCAACCTCGG+AGG + Chr4:88014017-88014036 MsG0480023642.01.T01:five_prime_UTR 65.0%
CCGCTGCCATACGGGCCATA+CGG - Chr4:88016981-88017000 None:intergenic 65.0%
CCGTATGGCCCGTATGGCAG+CGG + Chr4:88016978-88016997 MsG0480023642.01.T01:intron 65.0%
CGCATCACGAGAGGCAGACC+AGG - Chr4:88019261-88019280 None:intergenic 65.0%
CGTATGGCCCGTATGGCAGC+GGG + Chr4:88016979-88016998 MsG0480023642.01.T01:intron 65.0%
GAACCGACCCGCTGCCATAC+GGG - Chr4:88016989-88017008 None:intergenic 65.0%
GCCGAACCGTATGGCCCGTA+TGG + Chr4:88016972-88016991 MsG0480023642.01.T01:intron 65.0%
GCCGAGTGACGAGGCTGAGA+AGG + Chr4:88014081-88014100 MsG0480023642.01.T01:CDS 65.0%
TGTGGCTCTCGGGCTCATCC+TGG - Chr4:88018932-88018951 None:intergenic 65.0%
! GCCATACGGTTCGGCCGGAT+TGG - Chr4:88016967-88016986 None:intergenic 65.0%
! TACGGGCCATACGGTTCGGC+CGG - Chr4:88016972-88016991 None:intergenic 65.0%
!! CCGTGGTTTGCGGCGGATTG+AGG + Chr4:88017766-88017785 MsG0480023642.01.T01:intron 65.0%
!! GGTCGGGTGCGGTCGGTTTT+CGG - Chr4:88017799-88017818 None:intergenic 65.0%
GGACAACGGTCGGGTGCGGT+CGG - Chr4:88017806-88017825 None:intergenic 70.0%
GGCTGGACAACGGTCGGGTG+CGG - Chr4:88017810-88017829 None:intergenic 70.0%
TGGCCCGTATGGCAGCGGGT+CGG + Chr4:88016983-88017002 MsG0480023642.01.T01:intron 70.0%
! ACGGTTCGGCCGGATTGGGC+CGG - Chr4:88016962-88016981 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 88013758 88020323 88013758 ID=MsG0480023642.01;Name=MsG0480023642.01
Chr4 mRNA 88013758 88020323 88013758 ID=MsG0480023642.01.T01;Parent=MsG0480023642.01;Name=MsG0480023642.01.T01;_AED=0.50;_eAED=0.50;_QI=318|0.4|0.5|1|1|1|6|809|434
Chr4 exon 88013758 88014273 88013758 ID=MsG0480023642.01.T01:exon:6206;Parent=MsG0480023642.01.T01
Chr4 exon 88014459 88014521 88014459 ID=MsG0480023642.01.T01:exon:6207;Parent=MsG0480023642.01.T01
Chr4 exon 88015304 88015525 88015304 ID=MsG0480023642.01.T01:exon:6208;Parent=MsG0480023642.01.T01
Chr4 exon 88015642 88016021 88015642 ID=MsG0480023642.01.T01:exon:6209;Parent=MsG0480023642.01.T01
Chr4 exon 88016169 88016328 88016169 ID=MsG0480023642.01.T01:exon:6210;Parent=MsG0480023642.01.T01
Chr4 exon 88019233 88020323 88019233 ID=MsG0480023642.01.T01:exon:6211;Parent=MsG0480023642.01.T01
Chr4 five_prime_UTR 88013758 88014075 88013758 ID=MsG0480023642.01.T01:five_prime_utr;Parent=MsG0480023642.01.T01
Chr4 CDS 88014076 88014273 88014076 ID=MsG0480023642.01.T01:cds;Parent=MsG0480023642.01.T01
Chr4 CDS 88014459 88014521 88014459 ID=MsG0480023642.01.T01:cds;Parent=MsG0480023642.01.T01
Chr4 CDS 88015304 88015525 88015304 ID=MsG0480023642.01.T01:cds;Parent=MsG0480023642.01.T01
Chr4 CDS 88015642 88016021 88015642 ID=MsG0480023642.01.T01:cds;Parent=MsG0480023642.01.T01
Chr4 CDS 88016169 88016328 88016169 ID=MsG0480023642.01.T01:cds;Parent=MsG0480023642.01.T01
Chr4 CDS 88019233 88019514 88019233 ID=MsG0480023642.01.T01:cds;Parent=MsG0480023642.01.T01
Chr4 three_prime_UTR 88019515 88020323 88019515 ID=MsG0480023642.01.T01:three_prime_utr;Parent=MsG0480023642.01.T01
Gene Sequence

>MsG0480023642.01.T01

ATGAAGCCGAGTGACGAGGCTGAGAAGGAGGAAGAAGAGGAACAGTCCAGCGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAATCTCCAGTTGAAGACGCTAAACCCATTGGTGAACCCGTTAGGTTTTCTGGAAAAGGAAGAGGCAAAAAAAAGCATTTTCAGTCCTTCGACTTCGATGGAGACCAATATTCACTCGAGGACCCTGTGCTTCTTGTGCCCGAGGTTAAAGATCAAAAGCCGTATGTCGCAATTATCAAGGACATCACACAATCCATAAATGGAAATGGAAGCTTGATGATCACAGGGCAGTGGTTTTACCGTCCAGACGAAGCAGAAAAAAAGGGAGGTGGTAGCTGGCAATCCGTTGACACCAGAGAGCTGTTTTATAGTTTCCACCGAGATGAGGTTCCTGCAGAATCTGTTATGCATAAGTGTGTGGTGCATTTTGTCCCCATACACAAACAACTTCCAAATCGTAAGAAAACTCGTCAACGGTTGGGTGAACTACCTGACATCAAGACTGATGAAGCTGCTGCTGATCAGGAAGATCTTATTAAAAATAGAAGAAACTTTAAGAAGGGTATTTCAGCTATTGATGTTTCAAGGGAGGATGAAACATCTCGAAAGAGTCTCCACTCTCTGAAACCTGGAACACCAGGGAGTTGTCCAGTTATTACCACAGAGCATCAGCGCATATTAGTGAATTTTAATGCGTTAACAGGAGATAGCCATCGTGACAAGGGTTTGGCGATGTTGCTTCAAAATGTTCAATACTTGTTTGACACTGATGAGAGCAAAAAGAAAGAAGACAAATGTGGTGACCGCTCTGATGCTATTAACAATGAAGGCAATGACAAAGTCATTTACCATTGTTTCGCTCTACAGAATTCCAAGTCTTTTGTCTGGCCAGATGTTGCTGTTCCAGCTGTAGTTGCTCTGGAGAAGGCTCTATACCATACATTTTCATCAGATTATCAGAAGTACACCCAAAAGTTACGACAGCTAGTCTTTAATCTCAAGCTGGAATGCATAGCTTGTGGTCATTCCTGGTCTGCCTCTCGTGATGCGGTGTCTGTGCTAACCTTAGATGCATCAGACTCAAAAAGAAATGTAGGCACGGCCCCATGGGCAACTGCGAAATTTGATGTTGGGAAGAAGCTGGCAAGTCCCCGTGAATCTGACAAGACCAATGACATCTTTATGCCGCCTGTTTCCAGGAAAGATGAAACATCGAAGTTTCAAGACGTGCTGATTAGGAGGAGTATTCTATCTTTTGGATATCACTTTTGTTTGGAATTATAG
Protein sequence

>MsG0480023642.01.T01

MKPSDEAEKEEEEEQSSEEEEEEEEEEESPVEDAKPIGEPVRFSGKGRGKKKHFQSFDFDGDQYSLEDPVLLVPEVKDQKPYVAIIKDITQSINGNGSLMITGQWFYRPDEAEKKGGGSWQSVDTRELFYSFHRDEVPAESVMHKCVVHFVPIHKQLPNRKKTRQRLGELPDIKTDEAAADQEDLIKNRRNFKKGISAIDVSREDETSRKSLHSLKPGTPGSCPVITTEHQRILVNFNALTGDSHRDKGLAMLLQNVQYLFDTDESKKKEDKCGDRSDAINNEGNDKVIYHCFALQNSKSFVWPDVAVPAVVALEKALYHTFSSDYQKYTQKLRQLVFNLKLECIACGHSWSASRDAVSVLTLDASDSKRNVGTAPWATAKFDVGKKLASPRESDKTNDIFMPPVSRKDETSKFQDVLIRRSILSFGYHFCLEL*