Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024044.01.T01 | XP_013453287.1 | 85.882 | 170 | 15 | 2 | 2 | 166 | 114 | 279 | 2.92E-33 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024044.01.T01 | G7ZVA3 | 85.882 | 170 | 15 | 2 | 2 | 166 | 114 | 279 | 1.40e-33 | 129 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280011226.01 | MsG0580024044.01 | 0.801842 | 7.439618e-49 | 3.589473e-46 |
| MsG0480023102.01 | MsG0580024044.01 | 0.806574 | 7.700493e-50 | 4.194089e-47 |
| MsG0480023693.01 | MsG0580024044.01 | 0.801071 | 1.070208e-48 | 5.064101e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024044.01.T01 | MTR_5g004870 | 85.882 | 170 | 15 | 2 | 2 | 166 | 114 | 279 | 3.54e-37 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 88 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATATAAGAAACAAAATC+TGG | 0.335243 | 5:-214319 | None:intergenic |
| AAGAATTACTTACCAGCGTT+TGG | 0.337334 | 5:-214123 | None:intergenic |
| GTTTCTTATATCTCTACATT+AGG | 0.348243 | 5:+214328 | MsG0580024044.01.T01:three_prime_UTR |
| ATATGATGGGACTGCTGTAT+AGG | 0.351177 | 5:-213764 | None:intergenic |
| GGGTAAGGTGGTGGTGGTTG+TGG | 0.356727 | 5:-213862 | None:intergenic |
| GGCGGATAAGAGTGGGGAGG+AGG | 0.387349 | 5:-214051 | None:intergenic |
| GGACTGCTGTATAGGGAGTA+TGG | 0.403544 | 5:-213756 | None:intergenic |
| TATGATGGGACTGCTGTATA+GGG | 0.411289 | 5:-213763 | None:intergenic |
| GTAGCATATGTGTGTCAATA+TGG | 0.415498 | 5:-214240 | None:intergenic |
| GATGATGAGGGTGGTGGATA+GGG | 0.427578 | 5:-213961 | None:intergenic |
| ATTCACTTTGGCATTGGCAC+TGG | 0.431726 | 5:-213609 | None:intergenic |
| TTTGGCATTGGCACTGGCAT+TGG | 0.438190 | 5:-213603 | None:intergenic |
| CTGGTGATTCACTTTGGCAT+TGG | 0.439416 | 5:-213615 | None:intergenic |
| TGTGGGTAGTAGGAAGGAAC+AGG | 0.447068 | 5:-213790 | None:intergenic |
| GTGTGGTTGTTGTGGGTAGT+AGG | 0.452219 | 5:-213800 | None:intergenic |
| TGATGATGAGGGTGGTGGAT+AGG | 0.463785 | 5:-213962 | None:intergenic |
| GATGACACTGATTGAGGGTA+TGG | 0.470349 | 5:-213937 | None:intergenic |
| AATTAGAGTGTGGTTGTTGT+GGG | 0.481190 | 5:-213807 | None:intergenic |
| GATGATGAGGTTGGTGGATA+GGG | 0.488772 | 5:-214012 | None:intergenic |
| CTGAAGATGGCGGATAAGAG+TGG | 0.491172 | 5:-214059 | None:intergenic |
| ACAAAATCACGGTGGTTCCT+TGG | 0.491656 | 5:-214271 | None:intergenic |
| TAATTAGAGTGTGGTTGTTG+TGG | 0.492816 | 5:-213808 | None:intergenic |
| TATGGATATGTTGAGGATGG+TGG | 0.494303 | 5:-213919 | None:intergenic |
| CCTGCAGGTGGAGGGTATGA+AGG | 0.495024 | 5:-214093 | None:intergenic |
| GAAGGAACAGGATTATATGA+TGG | 0.495410 | 5:-213778 | None:intergenic |
| TGATGATGAGGTTGGTGGAT+AGG | 0.496782 | 5:-214013 | None:intergenic |
| TGGGGAGGAGGGTACGGTGA+TGG | 0.496971 | 5:-214039 | None:intergenic |
| TAAGAGTGGGGAGGAGGGTA+CGG | 0.498100 | 5:-214045 | None:intergenic |
| GGAGTATGGCTTGAGGAGCC+TGG | 0.500219 | 5:-213742 | None:intergenic |
| TAAGCAACAGCAGGTGTTGT+TGG | 0.507242 | 5:-213838 | None:intergenic |
| TAGGGAGATGACACTGATTG+AGG | 0.507262 | 5:-213943 | None:intergenic |
| TAGGGAGATGGCACTGAAGG+AGG | 0.510794 | 5:-213994 | None:intergenic |
| GATGGCACTGAAGGAGGGTA+TGG | 0.515857 | 5:-213988 | None:intergenic |
| GGTTACCTGGTGATTCACTT+TGG | 0.517974 | 5:-213621 | None:intergenic |
| GGAGGATAACCTGCAGGTGG+AGG | 0.519441 | 5:-214102 | None:intergenic |
| GTGTGTCAATATGGCGGTGG+AGG | 0.520887 | 5:-214231 | None:intergenic |
| CCTTCATACCCTCCACCTGC+AGG | 0.529204 | 5:+214093 | MsG0580024044.01.T01:CDS |
| AATTACTTACCAGCGTTTGG+AGG | 0.530399 | 5:-214120 | None:intergenic |
| AGGGAGATGACACTGATTGA+GGG | 0.533173 | 5:-213942 | None:intergenic |
| ATAACGAAGATGTGGATTAG+TGG | 0.533513 | 5:+214456 | MsG0580024044.01.T01:three_prime_UTR |
| GGATAGGGAGATGGCACTGA+AGG | 0.535955 | 5:-213997 | None:intergenic |
| GGTGGAGGGTATGAAGGTGG+TGG | 0.549199 | 5:-214087 | None:intergenic |
| GGTGATGATGATGAGGGTGG+TGG | 0.549858 | 5:-213967 | None:intergenic |
| TGAAGATGGCGGATAAGAGT+GGG | 0.557216 | 5:-214058 | None:intergenic |
| GCAGCAGGGTAAGGTGGTGG+TGG | 0.559747 | 5:-213868 | None:intergenic |
| GAGGATGGTGGATAAGAAGA+TGG | 0.563718 | 5:-213907 | None:intergenic |
| TTATGTGAATGTGAAGCAGC+AGG | 0.565883 | 5:-213883 | None:intergenic |
| AAGGAACAGGATTATATGAT+GGG | 0.567570 | 5:-213777 | None:intergenic |
| AGGGTATGGTGATGATGATG+AGG | 0.569188 | 5:-213974 | None:intergenic |
| GAATGTGAAGCAGCAGGGTA+AGG | 0.573678 | 5:-213877 | None:intergenic |
| GGTGATGATGATGAGGTTGG+TGG | 0.578742 | 5:-214018 | None:intergenic |
| AGATATAAGAAACAAAATCT+GGG | 0.579766 | 5:-214318 | None:intergenic |
| GGTTGTTGTGGGTAGTAGGA+AGG | 0.584669 | 5:-213796 | None:intergenic |
| ATTCTATTATAACGAAGATG+TGG | 0.584978 | 5:+214448 | MsG0580024044.01.T01:three_prime_UTR |
| AGGGAGATGGCACTGAAGGA+GGG | 0.585482 | 5:-213993 | None:intergenic |
| GATGGTGATGATGATGAGGT+TGG | 0.587170 | 5:-214021 | None:intergenic |
| GGGTATGGATATGTTGAGGA+TGG | 0.588607 | 5:-213922 | None:intergenic |
| GCGTTTGGAGGATAACCTGC+AGG | 0.588898 | 5:-214108 | None:intergenic |
| GAGGATAACCTGCAGGTGGA+GGG | 0.591147 | 5:-214101 | None:intergenic |
| GCGGATAAGAGTGGGGAGGA+GGG | 0.591531 | 5:-214050 | None:intergenic |
| CGGTGATGGTGATGATGATG+AGG | 0.592680 | 5:-214025 | None:intergenic |
| GAGGTTGGTGGATAGGGAGA+TGG | 0.593101 | 5:-214006 | None:intergenic |
| CAACAGCAGGTGTTGTTGGA+TGG | 0.604074 | 5:-213834 | None:intergenic |
| CAATGCCAAAGTGAATCACC+AGG | 0.609446 | 5:+213616 | MsG0580024044.01.T01:CDS |
| ATATGCTACTTTCGCTACCA+AGG | 0.613661 | 5:+214254 | MsG0580024044.01.T01:three_prime_UTR |
| ACTAATCATGTACAAAATCA+CGG | 0.618703 | 5:-214282 | None:intergenic |
| GATGGCGGATAAGAGTGGGG+AGG | 0.623756 | 5:-214054 | None:intergenic |
| GAAGCAGCAGGGTAAGGTGG+TGG | 0.624794 | 5:-213871 | None:intergenic |
| GCTAATATATTGCAGAAACC+AGG | 0.627769 | 5:+213724 | MsG0580024044.01.T01:intron |
| GGTGGTGGATAAGCTGAAGA+TGG | 0.630978 | 5:-214072 | None:intergenic |
| GCAGGTGGAGGGTATGAAGG+TGG | 0.632925 | 5:-214090 | None:intergenic |
| GGGTATGGTGATGATGATGA+GGG | 0.634043 | 5:-213973 | None:intergenic |
| GGTTGTGGATAAGCAACAGC+AGG | 0.634892 | 5:-213847 | None:intergenic |
| GGATGGTGATAATTAGAGTG+TGG | 0.637190 | 5:-213817 | None:intergenic |
| TATGGTGATGATGATGAGGG+TGG | 0.640824 | 5:-213970 | None:intergenic |
| TGTGTCAATATGGCGGTGGA+GGG | 0.643568 | 5:-214230 | None:intergenic |
| TATGTGAATGTGAAGCAGCA+GGG | 0.647936 | 5:-213882 | None:intergenic |
| GCAGGTTATCCTCCAAACGC+TGG | 0.651932 | 5:+214111 | MsG0580024044.01.T01:CDS |
| TGTGAAGCAGCAGGGTAAGG+TGG | 0.654828 | 5:-213874 | None:intergenic |
| TTTGGAGGATAACCTGCAGG+TGG | 0.658511 | 5:-214105 | None:intergenic |
| GGTGGATAAGCTGAAGATGG+CGG | 0.670105 | 5:-214069 | None:intergenic |
| TATGTGTGTCAATATGGCGG+TGG | 0.670842 | 5:-214234 | None:intergenic |
| TTGAGGGTATGGATATGTTG+AGG | 0.674935 | 5:-213926 | None:intergenic |
| TGTATAGGGAGTATGGCTTG+AGG | 0.692075 | 5:-213749 | None:intergenic |
| TGTCTGTCTGACAGACACGC+AGG | 0.700944 | 5:+213554 | None:intergenic |
| GAAGATGGCGGATAAGAGTG+GGG | 0.705455 | 5:-214057 | None:intergenic |
| GCATATGTGTGTCAATATGG+CGG | 0.756030 | 5:-214237 | None:intergenic |
| AATCATGTACAAAATCACGG+TGG | 0.820568 | 5:-214279 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATATATATAATAACAAT+TGG | + | Chr5:213672-213691 | MsG0580024044.01.T01:intron | 10.0% |
| !! | ATAAATAGTAATGAAAATGT+AGG | - | Chr5:213645-213664 | None:intergenic | 15.0% |
| !!! | ACTATCTATCATTATTTTTT+TGG | + | Chr5:214412-214431 | MsG0580024044.01.T01:three_prime_UTR | 15.0% |
| !!! | CTATCTATCATTATTTTTTT+GGG | + | Chr5:214413-214432 | MsG0580024044.01.T01:three_prime_UTR | 15.0% |
| !! | AGATATAAGAAACAAAATCT+GGG | - | Chr5:214321-214340 | None:intergenic | 20.0% |
| ! | ACTAATCATGTACAAAATCA+CGG | - | Chr5:214285-214304 | None:intergenic | 25.0% |
| ! | AGTAGATGTGAAAATTGAAA+TGG | - | Chr5:214162-214181 | None:intergenic | 25.0% |
| ! | ATTCTATTATAACGAAGATG+TGG | + | Chr5:214448-214467 | MsG0580024044.01.T01:three_prime_UTR | 25.0% |
| ! | GAGATATAAGAAACAAAATC+TGG | - | Chr5:214322-214341 | None:intergenic | 25.0% |
| ! | GATTCTTAATAAGTGTGTTT+GGG | + | Chr5:213699-213718 | MsG0580024044.01.T01:intron | 25.0% |
| ! | GTTTCTTATATCTCTACATT+AGG | + | Chr5:214328-214347 | MsG0580024044.01.T01:three_prime_UTR | 25.0% |
| ! | TGATTCTTAATAAGTGTGTT+TGG | + | Chr5:213698-213717 | MsG0580024044.01.T01:intron | 25.0% |
| AAGGAACAGGATTATATGAT+GGG | - | Chr5:213780-213799 | None:intergenic | 30.0% | |
| GATGTGAAAATTGAAATGGT+TGG | - | Chr5:214158-214177 | None:intergenic | 30.0% | |
| TAATGAAAATGTAGGTTACC+TGG | - | Chr5:213637-213656 | None:intergenic | 30.0% | |
| AAGAATTACTTACCAGCGTT+TGG | - | Chr5:214126-214145 | None:intergenic | 35.0% | |
| AATCATGTACAAAATCACGG+TGG | - | Chr5:214282-214301 | None:intergenic | 35.0% | |
| AATTAGAGTGTGGTTGTTGT+GGG | - | Chr5:213810-213829 | None:intergenic | 35.0% | |
| ATCCTGAAAAAGGATGTGAT+TGG | - | Chr5:214206-214225 | None:intergenic | 35.0% | |
| GAAAAAGGATGTGATTGGAA+AGG | - | Chr5:214201-214220 | None:intergenic | 35.0% | |
| GAAGGAACAGGATTATATGA+TGG | - | Chr5:213781-213800 | None:intergenic | 35.0% | |
| GCTAATATATTGCAGAAACC+AGG | + | Chr5:213724-213743 | MsG0580024044.01.T01:intron | 35.0% | |
| GTAGCATATGTGTGTCAATA+TGG | - | Chr5:214243-214262 | None:intergenic | 35.0% | |
| TAATTAGAGTGTGGTTGTTG+TGG | - | Chr5:213811-213830 | None:intergenic | 35.0% | |
| ! | TTCCAATCACATCCTTTTTC+AGG | + | Chr5:214201-214220 | MsG0580024044.01.T01:intron | 35.0% |
| !! | ATAACGAAGATGTGGATTAG+TGG | + | Chr5:214456-214475 | MsG0580024044.01.T01:three_prime_UTR | 35.0% |
| AATTACTTACCAGCGTTTGG+AGG | - | Chr5:214123-214142 | None:intergenic | 40.0% | |
| GCATATGTGTGTCAATATGG+CGG | - | Chr5:214240-214259 | None:intergenic | 40.0% | |
| GGATGGTGATAATTAGAGTG+TGG | - | Chr5:213820-213839 | None:intergenic | 40.0% | |
| TATGGATATGTTGAGGATGG+TGG | - | Chr5:213922-213941 | None:intergenic | 40.0% | |
| TATGTGAATGTGAAGCAGCA+GGG | - | Chr5:213885-213904 | None:intergenic | 40.0% | |
| TTATGTGAATGTGAAGCAGC+AGG | - | Chr5:213886-213905 | None:intergenic | 40.0% | |
| ! | ATATGATGGGACTGCTGTAT+AGG | - | Chr5:213767-213786 | None:intergenic | 40.0% |
| ! | TATGATGGGACTGCTGTATA+GGG | - | Chr5:213766-213785 | None:intergenic | 40.0% |
| ! | TTGAGGGTATGGATATGTTG+AGG | - | Chr5:213929-213948 | None:intergenic | 40.0% |
| !! | ATATGCTACTTTCGCTACCA+AGG | + | Chr5:214254-214273 | MsG0580024044.01.T01:three_prime_UTR | 40.0% |
| ACAAAATCACGGTGGTTCCT+TGG | - | Chr5:214274-214293 | None:intergenic | 45.0% | |
| CAATGCCAAAGTGAATCACC+AGG | + | Chr5:213616-213635 | MsG0580024044.01.T01:CDS | 45.0% | |
| CTGGTGATTCACTTTGGCAT+TGG | - | Chr5:213618-213637 | None:intergenic | 45.0% | |
| GGAGGGTAGAATCCTGAAAA+AGG | - | Chr5:214216-214235 | None:intergenic | 45.0% | |
| GGGTATGGATATGTTGAGGA+TGG | - | Chr5:213925-213944 | None:intergenic | 45.0% | |
| GGTTACCTGGTGATTCACTT+TGG | - | Chr5:213624-213643 | None:intergenic | 45.0% | |
| TATGTGTGTCAATATGGCGG+TGG | - | Chr5:214237-214256 | None:intergenic | 45.0% | |
| ! | AGGGAGATGACACTGATTGA+GGG | - | Chr5:213945-213964 | None:intergenic | 45.0% |
| ! | AGGGTATGGTGATGATGATG+AGG | - | Chr5:213977-213996 | None:intergenic | 45.0% |
| ! | GATGACACTGATTGAGGGTA+TGG | - | Chr5:213940-213959 | None:intergenic | 45.0% |
| ! | GATGGTGATGATGATGAGGT+TGG | - | Chr5:214024-214043 | None:intergenic | 45.0% |
| ! | GGGTATGGTGATGATGATGA+GGG | - | Chr5:213976-213995 | None:intergenic | 45.0% |
| ! | TAAGCAACAGCAGGTGTTGT+TGG | - | Chr5:213841-213860 | None:intergenic | 45.0% |
| ! | TAGGGAGATGACACTGATTG+AGG | - | Chr5:213946-213965 | None:intergenic | 45.0% |
| ! | TATGGTGATGATGATGAGGG+TGG | - | Chr5:213973-213992 | None:intergenic | 45.0% |
| ! | TGTATAGGGAGTATGGCTTG+AGG | - | Chr5:213752-213771 | None:intergenic | 45.0% |
| !! | ATTCACTTTGGCATTGGCAC+TGG | - | Chr5:213612-213631 | None:intergenic | 45.0% |
| !! | GAGGATGGTGGATAAGAAGA+TGG | - | Chr5:213910-213929 | None:intergenic | 45.0% |
| !! | GATGATGAGGTTGGTGGATA+GGG | - | Chr5:214015-214034 | None:intergenic | 45.0% |
| !! | TGAAGATGGCGGATAAGAGT+GGG | - | Chr5:214061-214080 | None:intergenic | 45.0% |
| !! | TGATGATGAGGTTGGTGGAT+AGG | - | Chr5:214016-214035 | None:intergenic | 45.0% |
| GAATGTGAAGCAGCAGGGTA+AGG | - | Chr5:213880-213899 | None:intergenic | 50.0% | |
| GGACTGCTGTATAGGGAGTA+TGG | - | Chr5:213759-213778 | None:intergenic | 50.0% | |
| GGTGGATAAGCTGAAGATGG+CGG | - | Chr5:214072-214091 | None:intergenic | 50.0% | |
| GGTTGTGGATAAGCAACAGC+AGG | - | Chr5:213850-213869 | None:intergenic | 50.0% | |
| GGTTGTTGTGGGTAGTAGGA+AGG | - | Chr5:213799-213818 | None:intergenic | 50.0% | |
| GTGTGGTTGTTGTGGGTAGT+AGG | - | Chr5:213803-213822 | None:intergenic | 50.0% | |
| TGTGGGTAGTAGGAAGGAAC+AGG | - | Chr5:213793-213812 | None:intergenic | 50.0% | |
| TGTGTCAATATGGCGGTGGA+GGG | - | Chr5:214233-214252 | None:intergenic | 50.0% | |
| TTTGGAGGATAACCTGCAGG+TGG | - | Chr5:214108-214127 | None:intergenic | 50.0% | |
| ! | CGGTGATGGTGATGATGATG+AGG | - | Chr5:214028-214047 | None:intergenic | 50.0% |
| ! | GGTGATGATGATGAGGTTGG+TGG | - | Chr5:214021-214040 | None:intergenic | 50.0% |
| !! | CAACAGCAGGTGTTGTTGGA+TGG | - | Chr5:213837-213856 | None:intergenic | 50.0% |
| !! | CTGAAGATGGCGGATAAGAG+TGG | - | Chr5:214062-214081 | None:intergenic | 50.0% |
| !! | GAAGATGGCGGATAAGAGTG+GGG | - | Chr5:214060-214079 | None:intergenic | 50.0% |
| !! | GATGATGAGGGTGGTGGATA+GGG | - | Chr5:213964-213983 | None:intergenic | 50.0% |
| !! | GGTGGTGGATAAGCTGAAGA+TGG | - | Chr5:214075-214094 | None:intergenic | 50.0% |
| !! | TGATGATGAGGGTGGTGGAT+AGG | - | Chr5:213965-213984 | None:intergenic | 50.0% |
| !! | TTTGGCATTGGCACTGGCAT+TGG | - | Chr5:213606-213625 | None:intergenic | 50.0% |
| GAGGATAACCTGCAGGTGGA+GGG | - | Chr5:214104-214123 | None:intergenic | 55.0% | |
| GCAGGTTATCCTCCAAACGC+TGG | + | Chr5:214111-214130 | MsG0580024044.01.T01:CDS | 55.0% | |
| GCGTTTGGAGGATAACCTGC+AGG | - | Chr5:214111-214130 | None:intergenic | 55.0% | |
| GTGTGTCAATATGGCGGTGG+AGG | - | Chr5:214234-214253 | None:intergenic | 55.0% | |
| TAAGAGTGGGGAGGAGGGTA+CGG | - | Chr5:214048-214067 | None:intergenic | 55.0% | |
| TGTGAAGCAGCAGGGTAAGG+TGG | - | Chr5:213877-213896 | None:intergenic | 55.0% | |
| ! | AGGGAGATGGCACTGAAGGA+GGG | - | Chr5:213996-214015 | None:intergenic | 55.0% |
| ! | GATGGCACTGAAGGAGGGTA+TGG | - | Chr5:213991-214010 | None:intergenic | 55.0% |
| ! | GGATAGGGAGATGGCACTGA+AGG | - | Chr5:214000-214019 | None:intergenic | 55.0% |
| ! | GGTGATGATGATGAGGGTGG+TGG | - | Chr5:213970-213989 | None:intergenic | 55.0% |
| ! | TAGGGAGATGGCACTGAAGG+AGG | - | Chr5:213997-214016 | None:intergenic | 55.0% |
| !! | GAGGTTGGTGGATAGGGAGA+TGG | - | Chr5:214009-214028 | None:intergenic | 55.0% |
| CCTTCATACCCTCCACCTGC+AGG | + | Chr5:214093-214112 | MsG0580024044.01.T01:CDS | 60.0% | |
| GAAGCAGCAGGGTAAGGTGG+TGG | - | Chr5:213874-213893 | None:intergenic | 60.0% | |
| GCGGATAAGAGTGGGGAGGA+GGG | - | Chr5:214053-214072 | None:intergenic | 60.0% | |
| GGAGGATAACCTGCAGGTGG+AGG | - | Chr5:214105-214124 | None:intergenic | 60.0% | |
| GGAGTATGGCTTGAGGAGCC+TGG | - | Chr5:213745-213764 | None:intergenic | 60.0% | |
| ! | CCTGCAGGTGGAGGGTATGA+AGG | - | Chr5:214096-214115 | None:intergenic | 60.0% |
| ! | GCAGGTGGAGGGTATGAAGG+TGG | - | Chr5:214093-214112 | None:intergenic | 60.0% |
| ! | GGTGGAGGGTATGAAGGTGG+TGG | - | Chr5:214090-214109 | None:intergenic | 60.0% |
| !! | GATGGCGGATAAGAGTGGGG+AGG | - | Chr5:214057-214076 | None:intergenic | 60.0% |
| !! | GGGTAAGGTGGTGGTGGTTG+TGG | - | Chr5:213865-213884 | None:intergenic | 60.0% |
| GGCGGATAAGAGTGGGGAGG+AGG | - | Chr5:214054-214073 | None:intergenic | 65.0% | |
| ! | GCAGCAGGGTAAGGTGGTGG+TGG | - | Chr5:213871-213890 | None:intergenic | 65.0% |
| ! | TGGGGAGGAGGGTACGGTGA+TGG | - | Chr5:214042-214061 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 213557 | 214528 | 213557 | ID=MsG0580024044.01;Name=MsG0580024044.01 |
| Chr5 | mRNA | 213557 | 214528 | 213557 | ID=MsG0580024044.01.T01;Parent=MsG0580024044.01;Name=MsG0580024044.01.T01;_AED=0.33;_eAED=0.34;_QI=0|1|0.66|1|0|0|3|280|166 |
| Chr5 | exon | 213557 | 213637 | 213557 | ID=MsG0580024044.01.T01:exon:22989;Parent=MsG0580024044.01.T01 |
| Chr5 | exon | 213739 | 214132 | 213739 | ID=MsG0580024044.01.T01:exon:22990;Parent=MsG0580024044.01.T01 |
| Chr5 | exon | 214223 | 214528 | 214223 | ID=MsG0580024044.01.T01:exon:22991;Parent=MsG0580024044.01.T01 |
| Chr5 | CDS | 213557 | 213637 | 213557 | ID=MsG0580024044.01.T01:cds;Parent=MsG0580024044.01.T01 |
| Chr5 | CDS | 213739 | 214132 | 213739 | ID=MsG0580024044.01.T01:cds;Parent=MsG0580024044.01.T01 |
| Chr5 | CDS | 214223 | 214248 | 214223 | ID=MsG0580024044.01.T01:cds;Parent=MsG0580024044.01.T01 |
| Chr5 | three_prime_UTR | 214249 | 214528 | 214249 | ID=MsG0580024044.01.T01:three_prime_utr;Parent=MsG0580024044.01.T01 |
| Gene Sequence |
| Protein sequence |
