Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023693.01.T01 | XP_013447202.1 | 92.701 | 411 | 24 | 4 | 1 | 408 | 1 | 408 | 0 | 716 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023693.01.T01 | P0CH01 | 31.967 | 366 | 213 | 11 | 35 | 392 | 28 | 365 | 1.45E-49 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023693.01.T01 | A0A072TUM6 | 92.701 | 411 | 24 | 4 | 1 | 408 | 1 | 408 | 0.0 | 716 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047831.01 | MsG0480023693.01 | 0.803122 | 4.051946e-49 | 2.019685e-46 |
| MsG0080048036.01 | MsG0480023693.01 | 0.847461 | 1.139647e-59 | 2.027248e-56 |
| MsG0080048111.01 | MsG0480023693.01 | 0.812641 | 3.828490e-51 | 2.447270e-48 |
| MsG0080048256.01 | MsG0480023693.01 | 0.822893 | 1.856435e-53 | 1.574063e-50 |
| MsG0080048301.01 | MsG0480023693.01 | 0.807975 | 3.887013e-50 | 2.195545e-47 |
| MsG0080048529.01 | MsG0480023693.01 | 0.808096 | 3.662904e-50 | 2.075636e-47 |
| MsG0080048917.01 | MsG0480023693.01 | -0.807716 | 4.411612e-50 | 2.475071e-47 |
| MsG0180000234.01 | MsG0480023693.01 | 0.818466 | 1.932033e-52 | 1.447435e-49 |
| MsG0180000306.01 | MsG0480023693.01 | -0.809589 | 1.755863e-50 | 1.035125e-47 |
| MsG0180000325.01 | MsG0480023693.01 | -0.808113 | 3.632787e-50 | 2.059444e-47 |
| MsG0180001533.01 | MsG0480023693.01 | 0.837945 | 3.852868e-57 | 5.083574e-54 |
| MsG0180001614.01 | MsG0480023693.01 | -0.803517 | 3.356335e-49 | 1.690134e-46 |
| MsG0180003235.01 | MsG0480023693.01 | 0.816354 | 5.775631e-52 | 4.083203e-49 |
| MsG0180003296.01 | MsG0480023693.01 | -0.813975 | 1.949175e-51 | 1.291527e-48 |
| MsG0180004177.01 | MsG0480023693.01 | -0.805048 | 1.611260e-49 | 8.439415e-47 |
| MsG0180004203.01 | MsG0480023693.01 | 0.806319 | 8.716516e-50 | 4.716674e-47 |
| MsG0180004302.01 | MsG0480023693.01 | -0.806847 | 6.741432e-50 | 3.697838e-47 |
| MsG0180004328.01 | MsG0480023693.01 | 0.837096 | 6.359886e-57 | 8.174719e-54 |
| MsG0180004852.01 | MsG0480023693.01 | -0.806573 | 7.703496e-50 | 4.195690e-47 |
| MsG0180004919.01 | MsG0480023693.01 | 0.808660 | 2.776689e-50 | 1.596811e-47 |
| MsG0180005471.01 | MsG0480023693.01 | 0.805268 | 1.448870e-49 | 7.631687e-47 |
| MsG0180005542.01 | MsG0480023693.01 | 0.803175 | 3.952191e-49 | 1.972715e-46 |
| MsG0280006442.01 | MsG0480023693.01 | 0.814667 | 1.371269e-51 | 9.257728e-49 |
| MsG0280006452.01 | MsG0480023693.01 | -0.805825 | 1.107232e-49 | 5.916522e-47 |
| MsG0280010802.01 | MsG0480023693.01 | 0.831792 | 1.365732e-55 | 1.497896e-52 |
| MsG0280011054.01 | MsG0480023693.01 | 0.839014 | 2.041259e-57 | 2.782365e-54 |
| MsG0280011226.01 | MsG0480023693.01 | 0.802293 | 6.009089e-49 | 2.932806e-46 |
| MsG0380011635.01 | MsG0480023693.01 | 0.824530 | 7.680558e-54 | 6.821347e-51 |
| MsG0380012254.01 | MsG0480023693.01 | 0.842077 | 3.223181e-58 | 4.831843e-55 |
| MsG0380012444.01 | MsG0480023693.01 | -0.807069 | 6.050680e-50 | 3.337931e-47 |
| MsG0380013101.01 | MsG0480023693.01 | 0.819430 | 1.165987e-52 | 8.970771e-50 |
| MsG0480018521.01 | MsG0480023693.01 | 0.845715 | 3.416224e-59 | 5.744825e-56 |
| MsG0480018522.01 | MsG0480023693.01 | 0.850181 | 2.004742e-60 | 3.893962e-57 |
| MsG0480018631.01 | MsG0480023693.01 | -0.800672 | 1.291239e-48 | 6.048289e-46 |
| MsG0480019217.01 | MsG0480023693.01 | 0.807365 | 5.238114e-50 | 2.911978e-47 |
| MsG0480019349.01 | MsG0480023693.01 | -0.808214 | 3.457385e-50 | 1.965307e-47 |
| MsG0480021314.01 | MsG0480023693.01 | -0.817112 | 3.903922e-52 | 2.817744e-49 |
| MsG0480021317.01 | MsG0480023693.01 | -0.812212 | 4.749890e-51 | 3.001811e-48 |
| MsG0480022286.01 | MsG0480023693.01 | -0.814925 | 1.202017e-51 | 8.171476e-49 |
| MsG0480022295.01 | MsG0480023693.01 | -0.819556 | 1.091352e-52 | 8.426231e-50 |
| MsG0480022296.01 | MsG0480023693.01 | -0.811180 | 7.962405e-51 | 4.895424e-48 |
| MsG0480022309.01 | MsG0480023693.01 | 0.829376 | 5.329658e-55 | 5.445366e-52 |
| MsG0480022311.01 | MsG0480023693.01 | 0.861403 | 1.051386e-63 | 2.971719e-60 |
| MsG0480022638.01 | MsG0480023693.01 | 0.880065 | 7.460234e-70 | 4.144573e-66 |
| MsG0480023102.01 | MsG0480023693.01 | 0.882983 | 6.586943e-71 | 4.099668e-67 |
| MsG0480023349.01 | MsG0480023693.01 | 0.803580 | 3.256909e-49 | 1.642775e-46 |
| MsG0480023518.01 | MsG0480023693.01 | 0.827416 | 1.583568e-54 | 1.527914e-51 |
| MsG0480023606.01 | MsG0480023693.01 | 0.806513 | 7.933134e-50 | 4.314116e-47 |
| MsG0480023693.01 | MsG0480023921.01 | 0.837511 | 4.979423e-57 | 6.483159e-54 |
| MsG0480023693.01 | MsG0580024044.01 | 0.801071 | 1.070208e-48 | 5.064101e-46 |
| MsG0480023693.01 | MsG0580024202.01 | 0.835554 | 1.568422e-56 | 1.924519e-53 |
| MsG0480023693.01 | MsG0580024207.01 | 0.820646 | 6.143471e-53 | 4.888764e-50 |
| MsG0480023693.01 | MsG0580024408.01 | 0.834906 | 2.286186e-56 | 2.751373e-53 |
| MsG0480023693.01 | MsG0580024986.01 | 0.844434 | 7.580150e-59 | 1.223548e-55 |
| MsG0480023693.01 | MsG0580024990.01 | 0.818277 | 2.131825e-52 | 1.588608e-49 |
| MsG0480023693.01 | MsG0580025997.01 | -0.834352 | 3.149790e-56 | 3.728330e-53 |
| MsG0480023693.01 | MsG0580026492.01 | 0.829201 | 5.877003e-55 | 5.973951e-52 |
| MsG0480023693.01 | MsG0580027750.01 | -0.824376 | 8.345063e-54 | 7.378509e-51 |
| MsG0480023693.01 | MsG0580027983.01 | -0.801646 | 8.162357e-49 | 3.918455e-46 |
| MsG0480023693.01 | MsG0580028510.01 | 0.818149 | 2.278385e-52 | 1.691901e-49 |
| MsG0480023693.01 | MsG0580028982.01 | -0.807050 | 6.106647e-50 | 3.367180e-47 |
| MsG0480023693.01 | MsG0580029555.01 | 0.826415 | 2.747342e-54 | 2.574942e-51 |
| MsG0480023693.01 | MsG0580029664.01 | 0.828331 | 9.539947e-55 | 9.452483e-52 |
| MsG0480023693.01 | MsG0580029816.01 | -0.821566 | 3.772289e-53 | 3.080022e-50 |
| MsG0480023693.01 | MsG0580030135.01 | 0.834797 | 2.434947e-56 | 2.920498e-53 |
| MsG0480023693.01 | MsG0580030203.01 | -0.808501 | 3.002837e-50 | 1.719832e-47 |
| MsG0480023693.01 | MsG0680030336.01 | 0.838449 | 2.856213e-57 | 3.827031e-54 |
| MsG0480023693.01 | MsG0680031009.01 | 0.820084 | 8.269152e-53 | 6.479682e-50 |
| MsG0480023693.01 | MsG0680034255.01 | 0.834325 | 3.200288e-56 | 3.785407e-53 |
| MsG0480023693.01 | MsG0680034316.01 | 0.882540 | 9.564746e-71 | 5.848145e-67 |
| MsG0480023693.01 | MsG0680034317.01 | 0.858086 | 1.048951e-62 | 2.645738e-59 |
| MsG0480023693.01 | MsG0780036661.01 | 0.810499 | 1.118184e-50 | 6.751110e-48 |
| MsG0480023693.01 | MsG0780037917.01 | 0.813662 | 2.285145e-51 | 1.501397e-48 |
| MsG0480023693.01 | MsG0780038839.01 | -0.802234 | 6.179764e-49 | 3.011471e-46 |
| MsG0480023693.01 | MsG0780038922.01 | 0.832072 | 1.164816e-55 | 1.287931e-52 |
| MsG0480023693.01 | MsG0780038963.01 | 0.826478 | 2.654394e-54 | 2.492066e-51 |
| MsG0480023693.01 | MsG0780039665.01 | 0.822067 | 2.888578e-53 | 2.392073e-50 |
| MsG0480023693.01 | MsG0780039968.01 | 0.816713 | 4.798192e-52 | 3.425594e-49 |
| MsG0480023693.01 | MsG0780040158.01 | -0.801029 | 1.091997e-48 | 5.161781e-46 |
| MsG0480023693.01 | MsG0780040181.01 | 0.803298 | 3.726041e-49 | 1.865666e-46 |
| MsG0480023693.01 | MsG0780040321.01 | -0.828614 | 8.152653e-55 | 8.145039e-52 |
| MsG0480023693.01 | MsG0780040515.01 | 0.810556 | 1.087101e-50 | 6.573400e-48 |
| MsG0480023693.01 | MsG0780040644.01 | -0.800110 | 1.680401e-48 | 7.759525e-46 |
| MsG0480023693.01 | MsG0780041447.01 | 0.803025 | 4.244526e-49 | 2.110397e-46 |
| MsG0480023693.01 | MsG0880042500.01 | -0.837803 | 4.188653e-57 | 5.503024e-54 |
| MsG0480023693.01 | MsG0880042740.01 | 0.812891 | 3.374653e-51 | 2.171398e-48 |
| MsG0480023693.01 | MsG0880043364.01 | 0.810981 | 8.793762e-51 | 5.378878e-48 |
| MsG0480023693.01 | MsG0880044352.01 | -0.821711 | 3.490994e-53 | 2.862104e-50 |
| MsG0480023693.01 | MsG0880044715.01 | -0.805844 | 1.097157e-49 | 5.865540e-47 |
| MsG0480023693.01 | MsG0880045252.01 | -0.817438 | 3.298250e-52 | 2.401996e-49 |
| MsG0480023693.01 | MsG0880045677.01 | 0.802018 | 6.845434e-49 | 3.317508e-46 |
| MsG0480023693.01 | MsG0880046429.01 | 0.824652 | 7.188830e-54 | 6.407665e-51 |
| MsG0480023693.01 | MsG0880047398.01 | 0.824541 | 7.633419e-54 | 6.781652e-51 |
| MsG0480023693.01 | MsG0880047628.01 | -0.803172 | 3.958156e-49 | 1.975521e-46 |
| MsG0480023693.01 | MsG0880047665.01 | 0.851758 | 7.202361e-61 | 1.472737e-57 |
| MsG0380015080.01 | MsG0480023693.01 | 0.800842 | 1.192166e-48 | 5.608327e-46 |
| MsG0380015369.01 | MsG0480023693.01 | 0.819754 | 9.834602e-53 | 7.635306e-50 |
| MsG0380015416.01 | MsG0480023693.01 | 0.832197 | 1.084363e-55 | 1.203347e-52 |
| MsG0380015541.01 | MsG0480023693.01 | 0.850480 | 1.652792e-60 | 3.241779e-57 |
| MsG0380016045.01 | MsG0480023693.01 | 0.815860 | 7.445596e-52 | 5.192893e-49 |
| MsG0380016261.01 | MsG0480023693.01 | 0.840111 | 1.058797e-57 | 1.493068e-54 |
| MsG0380016409.01 | MsG0480023693.01 | 0.808295 | 3.323066e-50 | 1.892958e-47 |
| MsG0380016896.01 | MsG0480023693.01 | -0.813872 | 2.053933e-51 | 1.357191e-48 |
| MsG0380016960.01 | MsG0480023693.01 | -0.801640 | 8.184874e-49 | 3.928693e-46 |
| MsG0380017115.01 | MsG0480023693.01 | 0.804172 | 2.454362e-49 | 1.256836e-46 |
| MsG0380017141.01 | MsG0480023693.01 | -0.828853 | 7.135490e-55 | 7.177803e-52 |
| MsG0380017151.01 | MsG0480023693.01 | 0.841709 | 4.031561e-58 | 5.973393e-55 |
| MsG0380017690.01 | MsG0480023693.01 | 0.801214 | 1.000552e-48 | 4.751427e-46 |
| MsG0380018070.01 | MsG0480023693.01 | 0.838694 | 2.469789e-57 | 3.334049e-54 |
| MsG0280006668.01 | MsG0480023693.01 | 0.847513 | 1.102613e-59 | 1.964604e-56 |
| MsG0280007216.01 | MsG0480023693.01 | 0.838693 | 2.471640e-57 | 3.336376e-54 |
| MsG0280008405.01 | MsG0480023693.01 | 0.817176 | 3.776767e-52 | 2.730762e-49 |
| MsG0280008601.01 | MsG0480023693.01 | 0.826109 | 3.248588e-54 | 3.018178e-51 |
| MsG0280008913.01 | MsG0480023693.01 | -0.815302 | 9.911523e-52 | 6.807900e-49 |
| MsG0280009667.01 | MsG0480023693.01 | 0.881204 | 2.914776e-70 | 1.692167e-66 |
| MsG0280009673.01 | MsG0480023693.01 | 0.835942 | 1.250879e-56 | 1.552866e-53 |
| MsG0280010410.01 | MsG0480023693.01 | 0.826083 | 3.295793e-54 | 3.059660e-51 |
| MsG0280010417.01 | MsG0480023693.01 | 0.812363 | 4.402090e-51 | 2.793376e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023693.01.T01 | MTR_8g099495 | 92.701 | 411 | 24 | 4 | 1 | 408 | 1 | 408 | 0.0 | 716 |
| MsG0480023693.01.T01 | MTR_8g099515 | 42.647 | 408 | 202 | 15 | 1 | 397 | 1 | 387 | 5.97e-96 | 293 |
| MsG0480023693.01.T01 | MTR_3g091200 | 35.326 | 368 | 192 | 14 | 45 | 397 | 45 | 381 | 1.65e-70 | 227 |
| MsG0480023693.01.T01 | MTR_5g009200 | 36.667 | 420 | 215 | 16 | 1 | 393 | 1 | 396 | 2.38e-70 | 227 |
| MsG0480023693.01.T01 | MTR_5g009210 | 39.370 | 381 | 191 | 12 | 32 | 393 | 2 | 361 | 1.69e-65 | 213 |
| MsG0480023693.01.T01 | MTR_5g009190 | 38.095 | 357 | 165 | 14 | 53 | 393 | 24 | 340 | 3.99e-62 | 204 |
| MsG0480023693.01.T01 | MTR_8g027745 | 34.637 | 358 | 199 | 10 | 45 | 395 | 33 | 362 | 1.53e-55 | 187 |
| MsG0480023693.01.T01 | MTR_7g117350 | 30.825 | 412 | 230 | 13 | 1 | 401 | 1 | 368 | 2.18e-49 | 171 |
| MsG0480023693.01.T01 | MTR_7g117350 | 30.900 | 411 | 221 | 14 | 1 | 392 | 1 | 367 | 2.38e-48 | 169 |
| MsG0480023693.01.T01 | MTR_3g012550 | 41.304 | 138 | 75 | 2 | 264 | 395 | 19 | 156 | 8.16e-31 | 116 |
| MsG0480023693.01.T01 | MTR_7g079280 | 33.758 | 157 | 89 | 3 | 264 | 405 | 13 | 169 | 1.71e-22 | 94.4 |
| MsG0480023693.01.T01 | MTR_8g028465 | 47.826 | 92 | 41 | 2 | 317 | 405 | 88 | 175 | 2.96e-21 | 91.3 |
| MsG0480023693.01.T01 | MTR_1g090480 | 31.746 | 126 | 82 | 2 | 270 | 392 | 23 | 147 | 1.72e-16 | 77.0 |
| MsG0480023693.01.T01 | MTR_7g079290 | 41.558 | 77 | 43 | 1 | 317 | 391 | 123 | 199 | 1.73e-16 | 78.2 |
| MsG0480023693.01.T01 | MTR_1g070140 | 37.008 | 127 | 74 | 2 | 268 | 389 | 47 | 172 | 2.78e-16 | 79.7 |
| MsG0480023693.01.T01 | MTR_6g007737 | 39.344 | 122 | 64 | 3 | 274 | 389 | 84 | 201 | 2.94e-16 | 80.1 |
| MsG0480023693.01.T01 | MTR_1g028080 | 39.167 | 120 | 61 | 3 | 34 | 147 | 32 | 145 | 7.30e-16 | 80.1 |
| MsG0480023693.01.T01 | MTR_5g034790 | 48.611 | 72 | 35 | 1 | 319 | 390 | 116 | 185 | 2.18e-15 | 77.4 |
| MsG0480023693.01.T01 | MTR_1g492830 | 29.787 | 141 | 86 | 4 | 270 | 404 | 13 | 146 | 2.60e-15 | 75.1 |
| MsG0480023693.01.T01 | MTR_1g056350 | 37.500 | 104 | 61 | 2 | 306 | 405 | 61 | 164 | 3.21e-15 | 73.6 |
| MsG0480023693.01.T01 | MTR_8g063660 | 47.222 | 72 | 36 | 1 | 319 | 390 | 68 | 137 | 4.60e-15 | 76.3 |
| MsG0480023693.01.T01 | MTR_7g096690 | 38.710 | 93 | 55 | 1 | 308 | 398 | 59 | 151 | 5.99e-15 | 75.9 |
| MsG0480023693.01.T01 | MTR_4g106680 | 34.677 | 124 | 63 | 5 | 276 | 389 | 59 | 174 | 6.18e-15 | 75.5 |
| MsG0480023693.01.T01 | MTR_1g074190 | 45.679 | 81 | 40 | 1 | 313 | 389 | 93 | 173 | 1.92e-14 | 74.3 |
| MsG0480023693.01.T01 | MTR_7g116220 | 41.772 | 79 | 33 | 2 | 319 | 390 | 70 | 142 | 4.23e-14 | 70.5 |
| MsG0480023693.01.T01 | MTR_1g043410 | 37.255 | 102 | 56 | 3 | 291 | 389 | 69 | 165 | 5.47e-14 | 72.8 |
| MsG0480023693.01.T01 | MTR_3g078470 | 37.179 | 78 | 49 | 0 | 313 | 390 | 70 | 147 | 7.96e-14 | 70.9 |
| MsG0480023693.01.T01 | MTR_3g078450 | 34.091 | 88 | 58 | 0 | 303 | 390 | 60 | 147 | 9.55e-14 | 70.5 |
| MsG0480023693.01.T01 | MTR_3g100400 | 42.254 | 71 | 39 | 1 | 319 | 389 | 130 | 198 | 1.18e-13 | 72.4 |
| MsG0480023693.01.T01 | MTR_4g063070 | 34.259 | 108 | 60 | 2 | 293 | 389 | 271 | 378 | 1.44e-13 | 72.0 |
| MsG0480023693.01.T01 | MTR_8g074900 | 39.726 | 73 | 38 | 1 | 319 | 391 | 158 | 224 | 1.46e-13 | 70.1 |
| MsG0480023693.01.T01 | MTR_7g076250 | 29.496 | 139 | 92 | 3 | 270 | 405 | 13 | 148 | 1.55e-13 | 69.3 |
| MsG0480023693.01.T01 | MTR_8g066780 | 30.345 | 145 | 92 | 3 | 270 | 405 | 58 | 202 | 1.58e-13 | 71.6 |
| MsG0480023693.01.T01 | MTR_4g030070 | 44.444 | 72 | 37 | 1 | 318 | 389 | 84 | 152 | 1.63e-13 | 70.1 |
| MsG0480023693.01.T01 | MTR_1g090460 | 48.276 | 58 | 27 | 1 | 338 | 392 | 83 | 140 | 2.08e-13 | 68.2 |
| MsG0480023693.01.T01 | MTR_3g094000 | 38.889 | 72 | 44 | 0 | 319 | 390 | 91 | 162 | 2.18e-13 | 68.6 |
| MsG0480023693.01.T01 | MTR_5g092790 | 33.333 | 75 | 50 | 0 | 317 | 391 | 155 | 229 | 2.54e-13 | 69.7 |
| MsG0480023693.01.T01 | MTR_1g031540 | 26.016 | 246 | 140 | 10 | 1 | 241 | 1 | 209 | 2.56e-13 | 72.4 |
| MsG0480023693.01.T01 | MTR_3g110190 | 51.020 | 49 | 24 | 0 | 347 | 395 | 92 | 140 | 2.83e-13 | 70.9 |
| MsG0480023693.01.T01 | MTR_8g092840 | 38.462 | 78 | 47 | 1 | 313 | 390 | 107 | 183 | 3.03e-13 | 69.3 |
| MsG0480023693.01.T01 | MTR_8g092985 | 40.278 | 72 | 42 | 1 | 319 | 390 | 111 | 181 | 3.67e-13 | 68.6 |
| MsG0480023693.01.T01 | MTR_3g071300 | 34.545 | 110 | 68 | 2 | 300 | 406 | 57 | 165 | 3.87e-13 | 67.8 |
| MsG0480023693.01.T01 | MTR_1g028130 | 24.781 | 343 | 194 | 14 | 12 | 338 | 7 | 301 | 3.98e-13 | 71.6 |
| MsG0480023693.01.T01 | MTR_8g092960 | 40.278 | 72 | 42 | 1 | 319 | 390 | 103 | 173 | 4.32e-13 | 68.6 |
| MsG0480023693.01.T01 | MTR_4g108830 | 31.250 | 96 | 63 | 1 | 295 | 390 | 97 | 189 | 5.87e-13 | 67.4 |
| MsG0480023693.01.T01 | MTR_8g092930 | 40.278 | 72 | 42 | 1 | 319 | 390 | 112 | 182 | 6.00e-13 | 68.2 |
| MsG0480023693.01.T01 | MTR_8g032690 | 47.619 | 63 | 33 | 0 | 345 | 407 | 17 | 79 | 6.03e-13 | 65.1 |
| MsG0480023693.01.T01 | MTR_6g087150 | 28.346 | 127 | 84 | 3 | 267 | 390 | 40 | 162 | 9.64e-13 | 69.7 |
| MsG0480023693.01.T01 | MTR_4g108830 | 31.250 | 96 | 63 | 1 | 295 | 390 | 125 | 217 | 9.67e-13 | 67.4 |
| MsG0480023693.01.T01 | MTR_5g030010 | 31.852 | 135 | 75 | 5 | 270 | 389 | 58 | 190 | 1.05e-12 | 69.3 |
| MsG0480023693.01.T01 | MTR_8g089880 | 39.759 | 83 | 46 | 2 | 309 | 389 | 115 | 195 | 1.12e-12 | 68.2 |
| MsG0480023693.01.T01 | MTR_8g093010 | 40.278 | 72 | 42 | 1 | 319 | 390 | 107 | 177 | 1.18e-12 | 67.4 |
| MsG0480023693.01.T01 | MTR_5g092750 | 34.667 | 75 | 49 | 0 | 317 | 391 | 155 | 229 | 1.31e-12 | 67.4 |
| MsG0480023693.01.T01 | MTR_7g088560 | 30.252 | 119 | 74 | 3 | 277 | 389 | 63 | 178 | 1.63e-12 | 66.2 |
| MsG0480023693.01.T01 | MTR_7g113800 | 40.000 | 75 | 42 | 2 | 317 | 389 | 89 | 162 | 1.75e-12 | 68.6 |
| MsG0480023693.01.T01 | MTR_7g116180 | 40.506 | 79 | 34 | 2 | 319 | 390 | 67 | 139 | 2.12e-12 | 65.9 |
| MsG0480023693.01.T01 | MTR_4g129420 | 34.711 | 121 | 65 | 5 | 274 | 389 | 75 | 186 | 2.77e-12 | 68.6 |
| MsG0480023693.01.T01 | MTR_7g116210 | 48.000 | 50 | 26 | 0 | 341 | 390 | 29 | 78 | 2.78e-12 | 63.5 |
| MsG0480023693.01.T01 | MTR_1g070425 | 40.506 | 79 | 34 | 2 | 319 | 390 | 68 | 140 | 3.08e-12 | 65.1 |
| MsG0480023693.01.T01 | MTR_5g022920 | 36.111 | 72 | 46 | 0 | 319 | 390 | 161 | 232 | 4.30e-12 | 65.9 |
| MsG0480023693.01.T01 | MTR_2g096350 | 38.028 | 71 | 44 | 0 | 320 | 390 | 108 | 178 | 4.46e-12 | 65.5 |
| MsG0480023693.01.T01 | MTR_7g073200 | 41.096 | 73 | 39 | 2 | 319 | 390 | 81 | 150 | 4.79e-12 | 64.7 |
| MsG0480023693.01.T01 | MTR_8g023400 | 46.774 | 62 | 29 | 1 | 347 | 408 | 117 | 174 | 5.14e-12 | 67.0 |
| MsG0480023693.01.T01 | MTR_7g116200 | 48.000 | 50 | 26 | 0 | 341 | 390 | 87 | 136 | 5.17e-12 | 64.3 |
| MsG0480023693.01.T01 | MTR_4g120270 | 51.163 | 43 | 21 | 0 | 347 | 389 | 104 | 146 | 6.47e-12 | 65.9 |
| MsG0480023693.01.T01 | MTR_3g091620 | 37.662 | 77 | 38 | 2 | 319 | 391 | 101 | 171 | 6.47e-12 | 67.0 |
| MsG0480023693.01.T01 | MTR_5g026730 | 46.154 | 52 | 28 | 0 | 339 | 390 | 86 | 137 | 6.96e-12 | 63.9 |
| MsG0480023693.01.T01 | MTR_4g056590 | 40.845 | 71 | 37 | 1 | 319 | 389 | 100 | 165 | 8.93e-12 | 64.3 |
| MsG0480023693.01.T01 | MTR_4g093830 | 37.349 | 83 | 48 | 2 | 309 | 389 | 114 | 194 | 9.23e-12 | 66.2 |
| MsG0480023693.01.T01 | MTR_3g095560 | 36.620 | 71 | 44 | 1 | 319 | 389 | 109 | 178 | 1.03e-11 | 65.1 |
| MsG0480023693.01.T01 | MTR_8g092990 | 55.319 | 47 | 21 | 0 | 344 | 390 | 138 | 184 | 1.06e-11 | 64.7 |
| MsG0480023693.01.T01 | MTR_8g092970 | 51.724 | 58 | 27 | 1 | 333 | 389 | 116 | 173 | 1.14e-11 | 64.3 |
| MsG0480023693.01.T01 | MTR_5g064990 | 43.056 | 72 | 40 | 1 | 319 | 389 | 114 | 185 | 1.21e-11 | 66.2 |
| MsG0480023693.01.T01 | MTR_5g064980 | 40.278 | 72 | 42 | 1 | 319 | 389 | 108 | 179 | 1.38e-11 | 66.2 |
| MsG0480023693.01.T01 | MTR_5g064890 | 33.333 | 96 | 57 | 2 | 294 | 389 | 108 | 196 | 1.41e-11 | 65.9 |
| MsG0480023693.01.T01 | MTR_3g081030 | 52.174 | 46 | 22 | 0 | 344 | 389 | 116 | 161 | 1.42e-11 | 63.9 |
| MsG0480023693.01.T01 | MTR_2g009310 | 30.392 | 102 | 66 | 3 | 290 | 389 | 105 | 203 | 1.91e-11 | 65.5 |
| MsG0480023693.01.T01 | MTR_2g044570 | 52.273 | 44 | 21 | 0 | 347 | 390 | 83 | 126 | 1.94e-11 | 65.1 |
| MsG0480023693.01.T01 | MTR_2g090905 | 43.750 | 64 | 31 | 2 | 328 | 389 | 53 | 113 | 1.94e-11 | 61.6 |
| MsG0480023693.01.T01 | MTR_3g099650 | 50.000 | 58 | 26 | 2 | 347 | 401 | 136 | 193 | 1.95e-11 | 65.5 |
| MsG0480023693.01.T01 | MTR_1g011380 | 48.214 | 56 | 28 | 1 | 335 | 390 | 329 | 383 | 2.04e-11 | 65.5 |
| MsG0480023693.01.T01 | MTR_2g079320 | 44.828 | 58 | 32 | 0 | 333 | 390 | 145 | 202 | 2.24e-11 | 63.2 |
| MsG0480023693.01.T01 | MTR_7g117540 | 53.488 | 43 | 20 | 0 | 347 | 389 | 101 | 143 | 2.28e-11 | 64.7 |
| MsG0480023693.01.T01 | MTR_3g116000 | 32.174 | 115 | 69 | 3 | 277 | 391 | 43 | 148 | 2.33e-11 | 63.2 |
| MsG0480023693.01.T01 | MTR_1g032440 | 55.769 | 52 | 22 | 1 | 338 | 389 | 290 | 340 | 2.65e-11 | 65.1 |
| MsG0480023693.01.T01 | MTR_5g026720 | 52.273 | 44 | 21 | 0 | 347 | 390 | 93 | 136 | 3.44e-11 | 61.6 |
| MsG0480023693.01.T01 | MTR_1g082550 | 53.488 | 43 | 20 | 0 | 347 | 389 | 127 | 169 | 4.64e-11 | 64.3 |
| MsG0480023693.01.T01 | MTR_1g031460 | 27.941 | 204 | 112 | 9 | 45 | 241 | 39 | 214 | 7.61e-11 | 64.3 |
| MsG0480023693.01.T01 | MTR_1g031320 | 25.403 | 248 | 141 | 12 | 4 | 240 | 1 | 215 | 7.78e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023693.01.T01 | AT5G53110 | 36.413 | 368 | 198 | 11 | 38 | 394 | 35 | 377 | 3.02e-69 | 224 |
| MsG0480023693.01.T01 | AT2G46495 | 31.967 | 366 | 213 | 11 | 35 | 392 | 28 | 365 | 1.48e-50 | 174 |
| MsG0480023693.01.T01 | AT2G25410 | 32.880 | 368 | 207 | 14 | 37 | 392 | 33 | 372 | 1.85e-50 | 174 |
| MsG0480023693.01.T01 | AT2G46494 | 31.319 | 364 | 204 | 10 | 34 | 390 | 35 | 359 | 2.67e-47 | 166 |
| MsG0480023693.01.T01 | AT2G46495 | 31.319 | 364 | 190 | 12 | 35 | 392 | 28 | 337 | 1.00e-46 | 164 |
| MsG0480023693.01.T01 | AT1G28040 | 31.132 | 318 | 183 | 10 | 86 | 390 | 2 | 296 | 2.58e-37 | 137 |
| MsG0480023693.01.T01 | AT5G07040 | 40.909 | 154 | 82 | 4 | 256 | 405 | 7 | 155 | 2.57e-33 | 122 |
| MsG0480023693.01.T01 | AT5G36001 | 28.969 | 359 | 173 | 14 | 35 | 392 | 32 | 309 | 1.37e-29 | 117 |
| MsG0480023693.01.T01 | AT2G46160 | 47.059 | 102 | 41 | 2 | 317 | 405 | 102 | 203 | 1.70e-22 | 95.1 |
| MsG0480023693.01.T01 | AT2G46160 | 47.059 | 102 | 41 | 2 | 317 | 405 | 102 | 203 | 1.70e-22 | 95.1 |
| MsG0480023693.01.T01 | AT2G46493 | 47.368 | 95 | 48 | 1 | 298 | 390 | 87 | 181 | 3.61e-22 | 93.6 |
| MsG0480023693.01.T01 | AT3G61550 | 42.991 | 107 | 45 | 2 | 315 | 405 | 95 | 201 | 2.70e-21 | 91.7 |
| MsG0480023693.01.T01 | AT2G35910 | 36.000 | 150 | 81 | 5 | 265 | 405 | 65 | 208 | 6.96e-18 | 82.4 |
| MsG0480023693.01.T01 | AT2G35000 | 32.456 | 114 | 73 | 2 | 280 | 389 | 64 | 177 | 5.91e-16 | 79.3 |
| MsG0480023693.01.T01 | AT5G06490 | 27.976 | 168 | 98 | 3 | 264 | 408 | 23 | 190 | 1.01e-15 | 75.9 |
| MsG0480023693.01.T01 | AT5G05810 | 45.833 | 72 | 35 | 2 | 319 | 389 | 120 | 188 | 5.64e-15 | 76.6 |
| MsG0480023693.01.T01 | AT1G04360 | 35.345 | 116 | 70 | 1 | 298 | 408 | 80 | 195 | 7.84e-15 | 75.9 |
| MsG0480023693.01.T01 | AT1G23980 | 35.659 | 129 | 74 | 4 | 268 | 389 | 60 | 186 | 1.05e-14 | 75.5 |
| MsG0480023693.01.T01 | AT5G66070 | 34.615 | 130 | 68 | 4 | 273 | 390 | 95 | 219 | 1.68e-14 | 72.8 |
| MsG0480023693.01.T01 | AT5G66070 | 34.615 | 130 | 68 | 4 | 273 | 390 | 95 | 219 | 1.68e-14 | 72.8 |
| MsG0480023693.01.T01 | AT3G03550 | 64.444 | 45 | 16 | 0 | 347 | 391 | 159 | 203 | 2.77e-14 | 73.9 |
| MsG0480023693.01.T01 | AT2G20030 | 44.444 | 72 | 38 | 1 | 319 | 390 | 98 | 167 | 3.24e-14 | 74.3 |
| MsG0480023693.01.T01 | AT5G36001 | 28.761 | 226 | 119 | 9 | 35 | 259 | 32 | 216 | 3.31e-14 | 72.0 |
| MsG0480023693.01.T01 | AT3G05200 | 40.860 | 93 | 41 | 3 | 319 | 403 | 99 | 185 | 3.73e-14 | 73.9 |
| MsG0480023693.01.T01 | AT5G66070 | 40.278 | 72 | 39 | 1 | 319 | 390 | 176 | 243 | 7.46e-14 | 71.2 |
| MsG0480023693.01.T01 | AT4G28890 | 43.056 | 72 | 39 | 1 | 319 | 390 | 97 | 166 | 8.44e-14 | 73.2 |
| MsG0480023693.01.T01 | AT5G43420 | 57.692 | 52 | 22 | 0 | 347 | 398 | 138 | 189 | 1.41e-13 | 72.0 |
| MsG0480023693.01.T01 | AT2G27940 | 34.694 | 98 | 60 | 3 | 294 | 390 | 89 | 183 | 1.70e-13 | 70.1 |
| MsG0480023693.01.T01 | AT1G33480 | 45.833 | 72 | 36 | 1 | 318 | 389 | 74 | 142 | 2.01e-13 | 70.5 |
| MsG0480023693.01.T01 | AT5G17600 | 60.000 | 45 | 18 | 0 | 347 | 391 | 142 | 186 | 2.26e-13 | 71.2 |
| MsG0480023693.01.T01 | AT1G72200 | 45.833 | 72 | 38 | 1 | 319 | 389 | 115 | 186 | 3.63e-13 | 71.2 |
| MsG0480023693.01.T01 | AT5G57750 | 42.667 | 75 | 34 | 2 | 320 | 390 | 96 | 165 | 4.84e-13 | 68.2 |
| MsG0480023693.01.T01 | AT5G40250 | 56.818 | 44 | 19 | 0 | 347 | 390 | 143 | 186 | 4.97e-13 | 70.5 |
| MsG0480023693.01.T01 | AT4G09130 | 43.056 | 72 | 40 | 1 | 319 | 389 | 91 | 162 | 5.00e-13 | 70.5 |
| MsG0480023693.01.T01 | AT4G40070 | 40.000 | 80 | 33 | 2 | 319 | 390 | 95 | 167 | 6.55e-13 | 69.7 |
| MsG0480023693.01.T01 | AT4G17905 | 45.070 | 71 | 39 | 0 | 319 | 389 | 153 | 223 | 7.08e-13 | 69.7 |
| MsG0480023693.01.T01 | AT2G34990 | 40.541 | 74 | 43 | 1 | 317 | 389 | 65 | 138 | 8.30e-13 | 68.9 |
| MsG0480023693.01.T01 | AT1G80400 | 50.000 | 66 | 32 | 1 | 335 | 400 | 343 | 407 | 8.50e-13 | 70.1 |
| MsG0480023693.01.T01 | AT2G34990 | 40.541 | 74 | 43 | 1 | 317 | 389 | 87 | 160 | 8.54e-13 | 69.3 |
| MsG0480023693.01.T01 | AT4G17905 | 45.070 | 71 | 39 | 0 | 319 | 389 | 127 | 197 | 8.83e-13 | 69.3 |
| MsG0480023693.01.T01 | AT4G09100 | 40.278 | 72 | 42 | 1 | 319 | 389 | 56 | 127 | 1.14e-12 | 65.1 |
| MsG0480023693.01.T01 | AT3G48030 | 44.048 | 84 | 40 | 3 | 319 | 401 | 102 | 179 | 1.22e-12 | 68.2 |
| MsG0480023693.01.T01 | AT5G27420 | 42.353 | 85 | 35 | 3 | 319 | 395 | 95 | 173 | 1.25e-12 | 69.3 |
| MsG0480023693.01.T01 | AT3G48030 | 44.048 | 84 | 40 | 3 | 319 | 401 | 180 | 257 | 1.99e-12 | 68.6 |
| MsG0480023693.01.T01 | AT4G09120 | 43.056 | 72 | 40 | 1 | 319 | 389 | 94 | 165 | 2.70e-12 | 68.2 |
| MsG0480023693.01.T01 | AT1G49220 | 41.667 | 72 | 41 | 1 | 319 | 390 | 108 | 178 | 3.49e-12 | 66.6 |
| MsG0480023693.01.T01 | AT5G01880 | 38.889 | 72 | 42 | 2 | 319 | 390 | 79 | 148 | 3.50e-12 | 64.7 |
| MsG0480023693.01.T01 | AT1G22500 | 40.909 | 88 | 49 | 2 | 319 | 403 | 89 | 176 | 4.40e-12 | 67.8 |
| MsG0480023693.01.T01 | AT2G17730 | 37.500 | 72 | 44 | 1 | 319 | 389 | 167 | 238 | 4.51e-12 | 66.2 |
| MsG0480023693.01.T01 | AT4G35840 | 35.616 | 73 | 46 | 1 | 319 | 390 | 162 | 234 | 4.72e-12 | 65.9 |
| MsG0480023693.01.T01 | AT1G76410 | 32.520 | 123 | 62 | 6 | 274 | 391 | 42 | 148 | 4.90e-12 | 64.7 |
| MsG0480023693.01.T01 | AT4G30400 | 53.488 | 43 | 20 | 0 | 347 | 389 | 134 | 176 | 5.49e-12 | 67.8 |
| MsG0480023693.01.T01 | AT4G10160 | 43.056 | 72 | 38 | 1 | 318 | 389 | 71 | 139 | 6.53e-12 | 65.5 |
| MsG0480023693.01.T01 | AT2G47560 | 38.028 | 71 | 44 | 0 | 319 | 389 | 80 | 150 | 6.92e-12 | 65.1 |
| MsG0480023693.01.T01 | AT4G10150 | 43.056 | 72 | 38 | 1 | 318 | 389 | 85 | 153 | 7.21e-12 | 65.5 |
| MsG0480023693.01.T01 | AT3G16720 | 48.936 | 47 | 24 | 0 | 347 | 393 | 119 | 165 | 7.53e-12 | 66.2 |
| MsG0480023693.01.T01 | AT2G18650 | 54.545 | 44 | 20 | 0 | 347 | 390 | 126 | 169 | 7.70e-12 | 67.0 |
| MsG0480023693.01.T01 | AT3G20395 | 36.709 | 79 | 46 | 1 | 319 | 397 | 147 | 221 | 8.11e-12 | 65.1 |
| MsG0480023693.01.T01 | AT4G33565 | 38.095 | 84 | 48 | 2 | 308 | 389 | 178 | 259 | 8.20e-12 | 66.6 |
| MsG0480023693.01.T01 | AT1G49210 | 38.889 | 72 | 43 | 1 | 319 | 390 | 108 | 178 | 9.90e-12 | 64.7 |
| MsG0480023693.01.T01 | AT4G15975 | 51.064 | 47 | 23 | 0 | 347 | 393 | 76 | 122 | 1.02e-11 | 65.1 |
| MsG0480023693.01.T01 | AT4G09110 | 41.667 | 72 | 41 | 1 | 319 | 389 | 94 | 165 | 1.22e-11 | 65.5 |
| MsG0480023693.01.T01 | AT1G72310 | 50.000 | 54 | 24 | 1 | 347 | 397 | 127 | 180 | 1.28e-11 | 65.9 |
| MsG0480023693.01.T01 | AT1G20823 | 31.405 | 121 | 68 | 5 | 277 | 391 | 44 | 155 | 1.35e-11 | 63.9 |
| MsG0480023693.01.T01 | AT4G32600 | 45.312 | 64 | 33 | 2 | 338 | 400 | 354 | 416 | 2.49e-11 | 65.5 |
| MsG0480023693.01.T01 | AT4G32600 | 45.312 | 64 | 33 | 2 | 338 | 400 | 354 | 416 | 2.49e-11 | 65.5 |
| MsG0480023693.01.T01 | AT5G10380 | 55.814 | 43 | 19 | 0 | 347 | 389 | 135 | 177 | 2.69e-11 | 64.7 |
| MsG0480023693.01.T01 | AT1G72220 | 31.200 | 125 | 72 | 3 | 277 | 389 | 97 | 219 | 3.68e-11 | 65.1 |
| MsG0480023693.01.T01 | AT4G11680 | 56.250 | 48 | 20 | 1 | 342 | 389 | 333 | 379 | 4.08e-11 | 64.7 |
| MsG0480023693.01.T01 | AT3G61180 | 49.091 | 55 | 27 | 1 | 335 | 389 | 311 | 364 | 4.55e-11 | 64.3 |
| MsG0480023693.01.T01 | AT3G14320 | 50.000 | 44 | 22 | 0 | 347 | 390 | 88 | 131 | 5.85e-11 | 62.0 |
| MsG0480023693.01.T01 | AT1G49200 | 36.111 | 72 | 45 | 1 | 319 | 390 | 109 | 179 | 8.22e-11 | 62.0 |
| MsG0480023693.01.T01 | AT3G62690 | 48.837 | 43 | 22 | 0 | 347 | 389 | 113 | 155 | 8.65e-11 | 62.4 |
| MsG0480023693.01.T01 | AT3G18773 | 37.500 | 72 | 44 | 1 | 319 | 390 | 103 | 173 | 9.31e-11 | 62.0 |
| MsG0480023693.01.T01 | AT3G10910 | 38.889 | 72 | 42 | 2 | 319 | 390 | 88 | 157 | 9.38e-11 | 60.8 |
Find 110 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGAAACGGTGAATCTTTA+AGG | 0.071957 | 4:-88640911 | None:intergenic |
| CTTAAATTCAAACAACTTAT+TGG | 0.196080 | 4:-88641011 | None:intergenic |
| ATACTAAATCTTATGGAATA+TGG | 0.270624 | 4:-88640473 | None:intergenic |
| TTCTACTATACTAAATCTTA+TGG | 0.279857 | 4:-88640480 | None:intergenic |
| TGTGAACTTCTAAATCAAAA+TGG | 0.293706 | 4:+88640521 | MsG0480023693.01.T01:exon |
| CCTTTGTTGATCAAATAGTT+TGG | 0.293835 | 4:+88640823 | MsG0480023693.01.T01:CDS |
| TGGTCAAACATGAAACGTTT+TGG | 0.294038 | 4:-88640870 | None:intergenic |
| TACGTTTCACAACAAAGTTT+TGG | 0.294494 | 4:-88640797 | None:intergenic |
| ATTGTCCTCAATACTTCATT+TGG | 0.314741 | 4:-88642472 | None:intergenic |
| GGTTTAACATGAAGTTGTTT+TGG | 0.332010 | 4:-88640890 | None:intergenic |
| TATATTTGTTATGGTTGAAT+TGG | 0.332107 | 4:-88640982 | None:intergenic |
| AATGATAATTATTAAGAAGT+TGG | 0.336693 | 4:-88642622 | None:intergenic |
| TATTAAGAAGTTGGAGATAC+AGG | 0.343558 | 4:-88642613 | None:intergenic |
| AAAGATTGGTTTGGTTTGAT+TGG | 0.344930 | 4:-88640695 | None:intergenic |
| AAGAGACGAATTGGTTGTTT+TGG | 0.346013 | 4:+88641159 | MsG0480023693.01.T01:CDS |
| TTTGATTGGTTTAATGAAAA+CGG | 0.347137 | 4:-88640681 | None:intergenic |
| TTGAAAATTCAGTGCTTGTT+TGG | 0.351667 | 4:-88642303 | None:intergenic |
| CTTTGTTGATCAAATAGTTT+GGG | 0.357769 | 4:+88640824 | MsG0480023693.01.T01:CDS |
| TTTCATGTGAATTGTATAGA+TGG | 0.358575 | 4:+88642514 | MsG0480023693.01.T01:CDS |
| TGGTGGTACTATATTTGTTA+TGG | 0.367373 | 4:-88640991 | None:intergenic |
| ATCTTCCACTTTCACCAAGC+TGG | 0.369581 | 4:-88642399 | None:intergenic |
| CTTTCAAGGAAAGTCAAGTA+TGG | 0.374180 | 4:+88642184 | MsG0480023693.01.T01:CDS |
| GAGGAAGATGTGGATTGGTT+GGG | 0.375688 | 4:+88641249 | MsG0480023693.01.T01:CDS |
| CTAAATCAAAATGGCAACTT+TGG | 0.376046 | 4:+88640530 | MsG0480023693.01.T01:exon |
| AAACCTTCGGACTTCCAATT+CGG | 0.377503 | 4:+88640655 | MsG0480023693.01.T01:CDS |
| TTGATTGGTTTAATGAAAAC+GGG | 0.385385 | 4:-88640680 | None:intergenic |
| GCTTCACAATTTCCACAATC+AGG | 0.389296 | 4:-88641221 | None:intergenic |
| GTGGCGGTTTAGCCATGGTT+GGG | 0.390733 | 4:-88640415 | None:intergenic |
| GGAATTTGGGAGAGTGAGTA+AGG | 0.392436 | 4:-88640775 | None:intergenic |
| AATGAAAACGGGAACCGAAT+TGG | 0.393998 | 4:-88640669 | None:intergenic |
| ACCTGGGTAACTACAAAGAT+TGG | 0.406641 | 4:-88640709 | None:intergenic |
| ACCTTAAAGATTCACCGTTT+CGG | 0.409470 | 4:+88640910 | MsG0480023693.01.T01:CDS |
| GTATGGTTTAAGCCTAGGTT+TGG | 0.409546 | 4:+88642201 | MsG0480023693.01.T01:CDS |
| TATGGTTTAAGCCTAGGTTT+GGG | 0.424366 | 4:+88642202 | MsG0480023693.01.T01:CDS |
| GGTAACTACAAAGATTGGTT+TGG | 0.430126 | 4:-88640704 | None:intergenic |
| ACAAATTATTTAACTGCAAG+TGG | 0.455576 | 4:+88642688 | MsG0480023693.01.T01:three_prime_UTR |
| ATATGGATGGAGAATTGATA+TGG | 0.462957 | 4:-88640456 | None:intergenic |
| GGGTTCACTGAAGGTGGTGG+TGG | 0.463259 | 4:-88640754 | None:intergenic |
| TCTTCCACTTTCACCAAGCT+GGG | 0.464098 | 4:-88642398 | None:intergenic |
| TATTTAACTGCAAGTGGAGC+AGG | 0.464905 | 4:+88642694 | MsG0480023693.01.T01:three_prime_UTR |
| ACTGAAGGTGGTGGTGGTGT+TGG | 0.466195 | 4:-88640748 | None:intergenic |
| AGCCTAGGTTTGGGAATACC+TGG | 0.477958 | 4:+88642211 | MsG0480023693.01.T01:CDS |
| TACCGGTGGAAGAGACGAAT+TGG | 0.478685 | 4:+88641150 | MsG0480023693.01.T01:CDS |
| GTCAAGTATGGTTTAAGCCT+AGG | 0.480880 | 4:+88642196 | MsG0480023693.01.T01:CDS |
| GTCTGCATGTAGGTCTTTCA+AGG | 0.481860 | 4:+88642170 | MsG0480023693.01.T01:intron |
| CTGGAAAATTTCGACACAAA+GGG | 0.482093 | 4:-88642561 | None:intergenic |
| GGAGGAAGATGTGGATTGGT+TGG | 0.485181 | 4:+88641248 | MsG0480023693.01.T01:CDS |
| TAGGTCTAATTGTGTTTACA+TGG | 0.490881 | 4:+88642239 | MsG0480023693.01.T01:CDS |
| AGGAAGATGTGGATTGGTTG+GGG | 0.491695 | 4:+88641250 | MsG0480023693.01.T01:CDS |
| AAAACCCAGCTTGGTGAAAG+TGG | 0.493961 | 4:+88642394 | MsG0480023693.01.T01:CDS |
| TTGGGAATACCTGGACTCCT+AGG | 0.494340 | 4:+88642220 | MsG0480023693.01.T01:CDS |
| ATTGACTATTTCACCTTGGG+TGG | 0.497251 | 4:-88641306 | None:intergenic |
| AGCCATGGTTGGGGAGAGGA+AGG | 0.498852 | 4:-88640405 | None:intergenic |
| GAAAACGAAGTAGATCTCTC+TGG | 0.499315 | 4:-88642580 | None:intergenic |
| GTTTAGCCATGGTTGGGGAG+AGG | 0.502471 | 4:-88640409 | None:intergenic |
| TTTGTTATGGTTGAATTGGA+AGG | 0.503015 | 4:-88640978 | None:intergenic |
| CAAATGTTGTCACTTGGCCT+AGG | 0.507133 | 4:-88642424 | None:intergenic |
| GATGTCCACGGTGTAGCAAA+AGG | 0.511204 | 4:-88641098 | None:intergenic |
| AAATTCAAACAACTTATTGG+TGG | 0.519438 | 4:-88641008 | None:intergenic |
| ACAACATCATGCGAAACCTT+CGG | 0.522768 | 4:+88640642 | MsG0480023693.01.T01:CDS |
| GAACATGAATTATTCGATTG+TGG | 0.526227 | 4:+88641058 | MsG0480023693.01.T01:CDS |
| TTACCCCACAGAACAACAAA+AGG | 0.526271 | 4:+88640597 | MsG0480023693.01.T01:CDS |
| TGTGGCGGTTTAGCCATGGT+TGG | 0.528194 | 4:-88640416 | None:intergenic |
| TAATAATCACTTAACCGAAA+CGG | 0.535587 | 4:-88640924 | None:intergenic |
| TATTTCGTCAGCTTTGATAC+CGG | 0.536087 | 4:+88641133 | MsG0480023693.01.T01:CDS |
| TGGCGGTTTAGCCATGGTTG+GGG | 0.543695 | 4:-88640414 | None:intergenic |
| AACCAATTCGTCTCTTCCAC+CGG | 0.549752 | 4:-88641152 | None:intergenic |
| TTGAATTGGAAGGACAACTT+AGG | 0.549801 | 4:-88640968 | None:intergenic |
| ACCAATCTTTGTAGTTACCC+AGG | 0.550531 | 4:+88640708 | MsG0480023693.01.T01:CDS |
| GTGCACGTGAGGTCGAAACC+TGG | 0.553567 | 4:-88640726 | None:intergenic |
| ACAATTAGACCTAGGAGTCC+AGG | 0.561924 | 4:-88642229 | None:intergenic |
| TAAATCTTATGGAATATGGA+TGG | 0.564195 | 4:-88640469 | None:intergenic |
| GCCATGGTTGGGGAGAGGAA+GGG | 0.574993 | 4:-88640404 | None:intergenic |
| TTCAAACATACCGTTGCAGT+GGG | 0.575801 | 4:+88641193 | MsG0480023693.01.T01:CDS |
| TGTTATGATCTTCCCACCCA+AGG | 0.578358 | 4:+88641293 | MsG0480023693.01.T01:CDS |
| ATCAGCCAAATGAAGTATTG+AGG | 0.579109 | 4:+88642467 | MsG0480023693.01.T01:CDS |
| TCCCTTCCTCTCCCCAACCA+TGG | 0.585106 | 4:+88640403 | MsG0480023693.01.T01:five_prime_UTR |
| AGATACCCTAAAACCCAGCT+TGG | 0.586664 | 4:+88642385 | MsG0480023693.01.T01:CDS |
| ATGTGAATTGTATAGATGGA+TGG | 0.587383 | 4:+88642518 | MsG0480023693.01.T01:CDS |
| GAGTAAGGGTTCACTGAAGG+TGG | 0.587696 | 4:-88640760 | None:intergenic |
| ATTCAAACATACCGTTGCAG+TGG | 0.592135 | 4:+88641192 | MsG0480023693.01.T01:CDS |
| TCTGGAAAATTTCGACACAA+AGG | 0.592383 | 4:-88642562 | None:intergenic |
| CAGTGGGATGATCCTGATTG+TGG | 0.594321 | 4:+88641209 | MsG0480023693.01.T01:CDS |
| TGACTGTGGCGGTTTAGCCA+TGG | 0.595149 | 4:-88640420 | None:intergenic |
| TTCGTCAGCTTTGATACCGG+TGG | 0.597171 | 4:+88641136 | MsG0480023693.01.T01:CDS |
| CCAAACTATTTGATCAACAA+AGG | 0.597408 | 4:-88640823 | None:intergenic |
| TTGACTATTTCACCTTGGGT+GGG | 0.599087 | 4:-88641305 | None:intergenic |
| GAAGCAAGTGGAGGAAGATG+TGG | 0.600587 | 4:+88641239 | MsG0480023693.01.T01:CDS |
| GTGAAGAGTTCACATGTGAA+AGG | 0.602315 | 4:+88640619 | MsG0480023693.01.T01:CDS |
| AGTGAGTAAGGGTTCACTGA+AGG | 0.603876 | 4:-88640763 | None:intergenic |
| TAAGGGTTCACTGAAGGTGG+TGG | 0.604544 | 4:-88640757 | None:intergenic |
| TGCACGTGAGGTCGAAACCT+GGG | 0.604806 | 4:-88640725 | None:intergenic |
| GTGAAAGTGGAAGATTGCCT+AGG | 0.611829 | 4:+88642407 | MsG0480023693.01.T01:CDS |
| AAGTGGAGGAAGATGTGGAT+TGG | 0.617851 | 4:+88641244 | MsG0480023693.01.T01:CDS |
| ATAGAGCAAATGTTGTCACT+TGG | 0.619697 | 4:-88642430 | None:intergenic |
| GAACCGAATTGGAAGTCCGA+AGG | 0.620121 | 4:-88640658 | None:intergenic |
| TAGTGATACGAGGATGAACA+AGG | 0.631273 | 4:-88640565 | None:intergenic |
| TGGTGGTGTTGGTGCACGTG+AGG | 0.632630 | 4:-88640737 | None:intergenic |
| TGAAAATAGTGATTACACTC+AGG | 0.636381 | 4:-88642496 | None:intergenic |
| AATTCACATAATGATGTCCA+CGG | 0.636628 | 4:-88641110 | None:intergenic |
| GCTACAACTTATGACTGTGG+CGG | 0.639131 | 4:-88640431 | None:intergenic |
| GAATTTGGGAGAGTGAGTAA+GGG | 0.642074 | 4:-88640774 | None:intergenic |
| TCAGGATCATCCCACTGCAA+CGG | 0.649351 | 4:-88641203 | None:intergenic |
| ATGTAAACACAATTAGACCT+AGG | 0.654229 | 4:-88642237 | None:intergenic |
| TGTGGAAATTGTGAAGCAAG+TGG | 0.655558 | 4:+88641227 | MsG0480023693.01.T01:CDS |
| GTCCACGGTGTAGCAAAAGG+AGG | 0.695275 | 4:-88641095 | None:intergenic |
| GTCCAGGTATTCCCAAACCT+AGG | 0.704709 | 4:-88642213 | None:intergenic |
| GTTGCTACAACTTATGACTG+TGG | 0.711705 | 4:-88640434 | None:intergenic |
| GGAAATTGTGAAGCAAGTGG+AGG | 0.747445 | 4:+88641230 | MsG0480023693.01.T01:CDS |
| ATACTAATAATAGTGATACG+AGG | 0.786051 | 4:-88640575 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATCAAAATAGATA+CGG | + | Chr4:88641458-88641477 | MsG0480023693.01.T01:intron | 10.0% |
| !! | AAAAAACATGAAGTTTAATT+TGG | + | Chr4:88641565-88641584 | MsG0480023693.01.T01:intron | 15.0% |
| !! | AACAAGTTATGTAATTAATT+AGG | - | Chr4:88642118-88642137 | None:intergenic | 15.0% |
| !! | AATGATAATTATTAAGAAGT+TGG | - | Chr4:88642625-88642644 | None:intergenic | 15.0% |
| !!! | TTTTGATATTTTTTTTTCCA+AGG | - | Chr4:88641452-88641471 | None:intergenic | 15.0% |
| !! | ACATTTGATTCAAATGTATT+TGG | - | Chr4:88641751-88641770 | None:intergenic | 20.0% |
| !! | ATACTAAATCTTATGGAATA+TGG | - | Chr4:88640476-88640495 | None:intergenic | 20.0% |
| !! | CTTAAATTCAAACAACTTAT+TGG | - | Chr4:88641014-88641033 | None:intergenic | 20.0% |
| !! | TTCTACTATACTAAATCTTA+TGG | - | Chr4:88640483-88640502 | None:intergenic | 20.0% |
| !!! | TATATTTGTTATGGTTGAAT+TGG | - | Chr4:88640985-88641004 | None:intergenic | 20.0% |
| !!! | TCATGTTTTTTTTTATCTTG+CGG | - | Chr4:88641556-88641575 | None:intergenic | 20.0% |
| !!! | TGCAAATTTAGATCATATTT+TGG | + | Chr4:88641353-88641372 | MsG0480023693.01.T01:intron | 20.0% |
| !!! | TTTGATTGGTTTAATGAAAA+CGG | - | Chr4:88640684-88640703 | None:intergenic | 20.0% |
| !!! | TTTGGTTTTCTTTTAACTTT+TGG | + | Chr4:88641371-88641390 | MsG0480023693.01.T01:intron | 20.0% |
| ! | AAATTCAAACAACTTATTGG+TGG | - | Chr4:88641011-88641030 | None:intergenic | 25.0% |
| ! | ACAAATTATTTAACTGCAAG+TGG | + | Chr4:88642688-88642707 | MsG0480023693.01.T01:three_prime_UTR | 25.0% |
| ! | ATACTAATAATAGTGATACG+AGG | - | Chr4:88640578-88640597 | None:intergenic | 25.0% |
| ! | CTTTGTTGATCAAATAGTTT+GGG | + | Chr4:88640824-88640843 | MsG0480023693.01.T01:CDS | 25.0% |
| ! | TAAATCTTATGGAATATGGA+TGG | - | Chr4:88640472-88640491 | None:intergenic | 25.0% |
| ! | TAATAATCACTTAACCGAAA+CGG | - | Chr4:88640927-88640946 | None:intergenic | 25.0% |
| ! | TGTAATTAATTAGGATCCTT+AGG | - | Chr4:88642109-88642128 | None:intergenic | 25.0% |
| ! | TGTGAACTTCTAAATCAAAA+TGG | + | Chr4:88640521-88640540 | MsG0480023693.01.T01:exon | 25.0% |
| ! | TTTCATGTGAATTGTATAGA+TGG | + | Chr4:88642514-88642533 | MsG0480023693.01.T01:CDS | 25.0% |
| !!! | AATAGTTGTGTTGTTTTCAT+TGG | - | Chr4:88641847-88641866 | None:intergenic | 25.0% |
| !!! | AGTTTCAATTTGGATTAGTT+CGG | + | Chr4:88641780-88641799 | MsG0480023693.01.T01:intron | 25.0% |
| !!! | ATAGTTGTGTTGTTTTCATT+GGG | - | Chr4:88641846-88641865 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGTGTGTTTAGCT+CGG | + | Chr4:88641664-88641683 | MsG0480023693.01.T01:intron | 25.0% |
| !!! | TTGATTGGTTTAATGAAAAC+GGG | - | Chr4:88640683-88640702 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTGTTTGATTTTG+AGG | + | Chr4:88641513-88641532 | MsG0480023693.01.T01:intron | 25.0% |
| !!! | TTTTTTTTCCAAGGACTATT+TGG | - | Chr4:88641443-88641462 | None:intergenic | 25.0% |
| AACTAAACGATTGTGTTTCA+TGG | - | Chr4:88641894-88641913 | None:intergenic | 30.0% | |
| AAGACCCATAACAAAAATTG+GGG | - | Chr4:88642347-88642366 | None:intergenic | 30.0% | |
| AATTCACATAATGATGTCCA+CGG | - | Chr4:88641113-88641132 | None:intergenic | 30.0% | |
| ACACAACTATTCATAGAAGA+CGG | + | Chr4:88641856-88641875 | MsG0480023693.01.T01:intron | 30.0% | |
| AGAAATATCCAAATAGTCCT+TGG | + | Chr4:88641432-88641451 | MsG0480023693.01.T01:intron | 30.0% | |
| ATATGGATGGAGAATTGATA+TGG | - | Chr4:88640459-88640478 | None:intergenic | 30.0% | |
| ATGTAAACACAATTAGACCT+AGG | - | Chr4:88642240-88642259 | None:intergenic | 30.0% | |
| ATGTGAATTGTATAGATGGA+TGG | + | Chr4:88642518-88642537 | MsG0480023693.01.T01:CDS | 30.0% | |
| ATTGTCCTCAATACTTCATT+TGG | - | Chr4:88642475-88642494 | None:intergenic | 30.0% | |
| CAAATCAAACAAATGCAGTT+TGG | + | Chr4:88641613-88641632 | MsG0480023693.01.T01:intron | 30.0% | |
| CAAGACCCATAACAAAAATT+GGG | - | Chr4:88642348-88642367 | None:intergenic | 30.0% | |
| CCAAACTATTTGATCAACAA+AGG | - | Chr4:88640826-88640845 | None:intergenic | 30.0% | |
| CCTTTGTTGATCAAATAGTT+TGG | + | Chr4:88640823-88640842 | MsG0480023693.01.T01:CDS | 30.0% | |
| CTAAATCAAAATGGCAACTT+TGG | + | Chr4:88640530-88640549 | MsG0480023693.01.T01:exon | 30.0% | |
| GAACATGAATTATTCGATTG+TGG | + | Chr4:88641058-88641077 | MsG0480023693.01.T01:CDS | 30.0% | |
| TAGGTCTAATTGTGTTTACA+TGG | + | Chr4:88642239-88642258 | MsG0480023693.01.T01:CDS | 30.0% | |
| TATGCAAAAAGAAGAACACA+AGG | + | Chr4:88642266-88642285 | MsG0480023693.01.T01:CDS | 30.0% | |
| TATTAAGAAGTTGGAGATAC+AGG | - | Chr4:88642616-88642635 | None:intergenic | 30.0% | |
| TCAAGACCCATAACAAAAAT+TGG | - | Chr4:88642349-88642368 | None:intergenic | 30.0% | |
| TGAAAATAGTGATTACACTC+AGG | - | Chr4:88642499-88642518 | None:intergenic | 30.0% | |
| TGAAACACAATCGTTTAGTT+TGG | + | Chr4:88641894-88641913 | MsG0480023693.01.T01:intron | 30.0% | |
| TTGAAAATTCAGTGCTTGTT+TGG | - | Chr4:88642306-88642325 | None:intergenic | 30.0% | |
| ! | ACGTTTCACAACAAAGTTTT+GGG | - | Chr4:88640799-88640818 | None:intergenic | 30.0% |
| ! | ATCATTGACTATTTCACCTT+GGG | - | Chr4:88641312-88641331 | None:intergenic | 30.0% |
| ! | GAAACACAATCGTTTAGTTT+GGG | + | Chr4:88641895-88641914 | MsG0480023693.01.T01:intron | 30.0% |
| ! | GGTTTAACATGAAGTTGTTT+TGG | - | Chr4:88640893-88640912 | None:intergenic | 30.0% |
| ! | TACGTTTCACAACAAAGTTT+TGG | - | Chr4:88640800-88640819 | None:intergenic | 30.0% |
| ! | TGGTGGTACTATATTTGTTA+TGG | - | Chr4:88640994-88641013 | None:intergenic | 30.0% |
| ! | TTCTTTTCCGTTGTTCTTTT+GGG | + | Chr4:88642147-88642166 | MsG0480023693.01.T01:intron | 30.0% |
| ! | TTTCTTTTCCGTTGTTCTTT+TGG | + | Chr4:88642146-88642165 | MsG0480023693.01.T01:intron | 30.0% |
| ! | TTTGTTATGGTTGAATTGGA+AGG | - | Chr4:88640981-88641000 | None:intergenic | 30.0% |
| !! | AAAGATTGGTTTGGTTTGAT+TGG | - | Chr4:88640698-88640717 | None:intergenic | 30.0% |
| !! | TCGTTTTTGCAGTTTCAATT+TGG | + | Chr4:88641770-88641789 | MsG0480023693.01.T01:intron | 30.0% |
| !!! | ACAACAAAGTTTTGGGAATT+TGG | - | Chr4:88640792-88640811 | None:intergenic | 30.0% |
| !!! | ATTCATAGTGCATTTTGGTT+TGG | + | Chr4:88641495-88641514 | MsG0480023693.01.T01:intron | 30.0% |
| !!! | CAACAAAGTTTTGGGAATTT+GGG | - | Chr4:88640791-88640810 | None:intergenic | 30.0% |
| !!! | TAGTTGTGTTGTTTTCATTG+GGG | - | Chr4:88641845-88641864 | None:intergenic | 30.0% |
| AATCTCCACTATAAGTCCTA+AGG | + | Chr4:88642090-88642109 | MsG0480023693.01.T01:intron | 35.0% | |
| ACCTTAAAGATTCACCGTTT+CGG | + | Chr4:88640910-88640929 | MsG0480023693.01.T01:CDS | 35.0% | |
| AGACCCATAACAAAAATTGG+GGG | - | Chr4:88642346-88642365 | None:intergenic | 35.0% | |
| ATAGAGCAAATGTTGTCACT+TGG | - | Chr4:88642433-88642452 | None:intergenic | 35.0% | |
| CAAACAAATGCAGTTTGGTT+TGG | + | Chr4:88641618-88641637 | MsG0480023693.01.T01:intron | 35.0% | |
| CTGGAAAATTTCGACACAAA+GGG | - | Chr4:88642564-88642583 | None:intergenic | 35.0% | |
| CTTTCAAGGAAAGTCAAGTA+TGG | + | Chr4:88642184-88642203 | MsG0480023693.01.T01:CDS | 35.0% | |
| TATGGTTTAAGCCTAGGTTT+GGG | + | Chr4:88642202-88642221 | MsG0480023693.01.T01:CDS | 35.0% | |
| TCTGGAAAATTTCGACACAA+AGG | - | Chr4:88642565-88642584 | None:intergenic | 35.0% | |
| TTGAATTGGAAGGACAACTT+AGG | - | Chr4:88640971-88640990 | None:intergenic | 35.0% | |
| ! | AAGAGACGAATTGGTTGTTT+TGG | + | Chr4:88641159-88641178 | MsG0480023693.01.T01:CDS | 35.0% |
| ! | CATCATTGACTATTTCACCT+TGG | - | Chr4:88641313-88641332 | None:intergenic | 35.0% |
| ! | GAGATCTACTTCGTTTTCTT+CGG | + | Chr4:88642585-88642604 | MsG0480023693.01.T01:CDS | 35.0% |
| ! | GGTAACTACAAAGATTGGTT+TGG | - | Chr4:88640707-88640726 | None:intergenic | 35.0% |
| ! | GGTCAAACATGAAACGTTTT+GGG | - | Chr4:88640872-88640891 | None:intergenic | 35.0% |
| ! | TATTTCGTCAGCTTTGATAC+CGG | + | Chr4:88641133-88641152 | MsG0480023693.01.T01:CDS | 35.0% |
| ! | TCTTTTCCGTTGTTCTTTTG+GGG | + | Chr4:88642148-88642167 | MsG0480023693.01.T01:intron | 35.0% |
| ! | TGGTCAAACATGAAACGTTT+TGG | - | Chr4:88640873-88640892 | None:intergenic | 35.0% |
| !! | ATCAGCCAAATGAAGTATTG+AGG | + | Chr4:88642467-88642486 | MsG0480023693.01.T01:CDS | 35.0% |
| !! | GAGGTATTCATAGTGCATTT+TGG | + | Chr4:88641490-88641509 | MsG0480023693.01.T01:intron | 35.0% |
| !! | TTTTGTTATGGGTCTTGACA+GGG | + | Chr4:88642351-88642370 | MsG0480023693.01.T01:CDS | 35.0% |
| !! | TTTTTGTTATGGGTCTTGAC+AGG | + | Chr4:88642350-88642369 | MsG0480023693.01.T01:CDS | 35.0% |
| !!! | AGTTGTGTTGTTTTCATTGG+GGG | - | Chr4:88641844-88641863 | None:intergenic | 35.0% |
| !!! | CTTTTTTTTACTTAGCCGCA+TGG | - | Chr4:88641723-88641742 | None:intergenic | 35.0% |
| !!! | TTCACCTTTTGTTGTTCTGT+GGG | - | Chr4:88640604-88640623 | None:intergenic | 35.0% |
| AAACCTTCGGACTTCCAATT+CGG | + | Chr4:88640655-88640674 | MsG0480023693.01.T01:CDS | 40.0% | |
| AATGAAAACGGGAACCGAAT+TGG | - | Chr4:88640672-88640691 | None:intergenic | 40.0% | |
| ACAACATCATGCGAAACCTT+CGG | + | Chr4:88640642-88640661 | MsG0480023693.01.T01:CDS | 40.0% | |
| ACCAATCTTTGTAGTTACCC+AGG | + | Chr4:88640708-88640727 | MsG0480023693.01.T01:CDS | 40.0% | |
| ACCGAAACGGTGAATCTTTA+AGG | - | Chr4:88640914-88640933 | None:intergenic | 40.0% | |
| ACCTGGGTAACTACAAAGAT+TGG | - | Chr4:88640712-88640731 | None:intergenic | 40.0% | |
| AGGATCCTTAGGACTTATAG+TGG | - | Chr4:88642098-88642117 | None:intergenic | 40.0% | |
| ATTCAAACATACCGTTGCAG+TGG | + | Chr4:88641192-88641211 | MsG0480023693.01.T01:CDS | 40.0% | |
| ATTGACTATTTCACCTTGGG+TGG | - | Chr4:88641309-88641328 | None:intergenic | 40.0% | |
| GAAAACGAAGTAGATCTCTC+TGG | - | Chr4:88642583-88642602 | None:intergenic | 40.0% | |
| GAATTTGGGAGAGTGAGTAA+GGG | - | Chr4:88640777-88640796 | None:intergenic | 40.0% | |
| GACCCATAACAAAAATTGGG+GGG | - | Chr4:88642345-88642364 | None:intergenic | 40.0% | |
| GCAAATTGAACTGAACCATG+CGG | + | Chr4:88641705-88641724 | MsG0480023693.01.T01:intron | 40.0% | |
| GCATGGTTCAGTTCAATTTG+CGG | - | Chr4:88641706-88641725 | None:intergenic | 40.0% | |
| GCTTCACAATTTCCACAATC+AGG | - | Chr4:88641224-88641243 | None:intergenic | 40.0% | |
| GTATGGTTTAAGCCTAGGTT+TGG | + | Chr4:88642201-88642220 | MsG0480023693.01.T01:CDS | 40.0% | |
| GTCAAGTATGGTTTAAGCCT+AGG | + | Chr4:88642196-88642215 | MsG0480023693.01.T01:CDS | 40.0% | |
| GTCTACATTTGCAACTACAG+CGG | + | Chr4:88641917-88641936 | MsG0480023693.01.T01:intron | 40.0% | |
| GTGAAGAGTTCACATGTGAA+AGG | + | Chr4:88640619-88640638 | MsG0480023693.01.T01:CDS | 40.0% | |
| GTTGCTACAACTTATGACTG+TGG | - | Chr4:88640437-88640456 | None:intergenic | 40.0% | |
| TAGTGATACGAGGATGAACA+AGG | - | Chr4:88640568-88640587 | None:intergenic | 40.0% | |
| TATTTAACTGCAAGTGGAGC+AGG | + | Chr4:88642694-88642713 | MsG0480023693.01.T01:three_prime_UTR | 40.0% | |
| TGTGGAAATTGTGAAGCAAG+TGG | + | Chr4:88641227-88641246 | MsG0480023693.01.T01:CDS | 40.0% | |
| TTACCCCACAGAACAACAAA+AGG | + | Chr4:88640597-88640616 | MsG0480023693.01.T01:CDS | 40.0% | |
| TTCAAACATACCGTTGCAGT+GGG | + | Chr4:88641193-88641212 | MsG0480023693.01.T01:CDS | 40.0% | |
| TTGACTATTTCACCTTGGGT+GGG | - | Chr4:88641308-88641327 | None:intergenic | 40.0% | |
| ! | TCGCGGTTTTTCTATTGTGT+TGG | + | Chr4:88641804-88641823 | MsG0480023693.01.T01:intron | 40.0% |
| ! | TTTCACCAAGCTGGGTTTTA+GGG | - | Chr4:88642393-88642412 | None:intergenic | 40.0% |
| !! | ATTTGGATTAGTTCGGTTCG+CGG | + | Chr4:88641787-88641806 | MsG0480023693.01.T01:intron | 40.0% |
| !! | CACCCCCCAATTTTTGTTAT+GGG | + | Chr4:88642340-88642359 | MsG0480023693.01.T01:CDS | 40.0% |
| !! | GCAGTTTGGTTTGGTTGTTA+CGG | + | Chr4:88641627-88641646 | MsG0480023693.01.T01:intron | 40.0% |
| !!! | CTTCACCTTTTGTTGTTCTG+TGG | - | Chr4:88640605-88640624 | None:intergenic | 40.0% |
| !!! | TCACCTTTTGTTGTTCTGTG+GGG | - | Chr4:88640603-88640622 | None:intergenic | 40.0% |
| AACCAATTCGTCTCTTCCAC+CGG | - | Chr4:88641155-88641174 | None:intergenic | 45.0% | |
| AAGTGGAGGAAGATGTGGAT+TGG | + | Chr4:88641244-88641263 | MsG0480023693.01.T01:CDS | 45.0% | |
| ACAATTAGACCTAGGAGTCC+AGG | - | Chr4:88642232-88642251 | None:intergenic | 45.0% | |
| AGATACCCTAAAACCCAGCT+TGG | + | Chr4:88642385-88642404 | MsG0480023693.01.T01:CDS | 45.0% | |
| AGTGAGTAAGGGTTCACTGA+AGG | - | Chr4:88640766-88640785 | None:intergenic | 45.0% | |
| ATAGATACGGCGAGAACTAG+AGG | + | Chr4:88641471-88641490 | MsG0480023693.01.T01:intron | 45.0% | |
| ATCTTCCACTTTCACCAAGC+TGG | - | Chr4:88642402-88642421 | None:intergenic | 45.0% | |
| GCTACAACTTATGACTGTGG+CGG | - | Chr4:88640434-88640453 | None:intergenic | 45.0% | |
| GGAAATTGTGAAGCAAGTGG+AGG | + | Chr4:88641230-88641249 | MsG0480023693.01.T01:CDS | 45.0% | |
| GGAATTTGGGAGAGTGAGTA+AGG | - | Chr4:88640778-88640797 | None:intergenic | 45.0% | |
| GTCTGCATGTAGGTCTTTCA+AGG | + | Chr4:88642170-88642189 | MsG0480023693.01.T01:intron | 45.0% | |
| GTGAAAGTGGAAGATTGCCT+AGG | + | Chr4:88642407-88642426 | MsG0480023693.01.T01:CDS | 45.0% | |
| TCTTCCACTTTCACCAAGCT+GGG | - | Chr4:88642401-88642420 | None:intergenic | 45.0% | |
| TGCAGACCCCAAAAGAACAA+CGG | - | Chr4:88642157-88642176 | None:intergenic | 45.0% | |
| TGTTATGATCTTCCCACCCA+AGG | + | Chr4:88641293-88641312 | MsG0480023693.01.T01:CDS | 45.0% | |
| ! | AAAACCCAGCTTGGTGAAAG+TGG | + | Chr4:88642394-88642413 | MsG0480023693.01.T01:CDS | 45.0% |
| ! | CAAATGTTGTCACTTGGCCT+AGG | - | Chr4:88642427-88642446 | None:intergenic | 45.0% |
| ! | CTTTCACCAAGCTGGGTTTT+AGG | - | Chr4:88642394-88642413 | None:intergenic | 45.0% |
| ! | GCACCCCCCAATTTTTGTTA+TGG | + | Chr4:88642339-88642358 | MsG0480023693.01.T01:CDS | 45.0% |
| !! | AGGAAGATGTGGATTGGTTG+GGG | + | Chr4:88641250-88641269 | MsG0480023693.01.T01:CDS | 45.0% |
| !! | GAGGAAGATGTGGATTGGTT+GGG | + | Chr4:88641249-88641268 | MsG0480023693.01.T01:CDS | 45.0% |
| !!! | ACGTTTTGGGAAGCACTTGT+TGG | - | Chr4:88640859-88640878 | None:intergenic | 45.0% |
| !!! | CGTTTTGGGAAGCACTTGTT+GGG | - | Chr4:88640858-88640877 | None:intergenic | 45.0% |
| !!! | TTCTTTTGGGGTCTGCATGT+AGG | + | Chr4:88642160-88642179 | MsG0480023693.01.T01:intron | 45.0% |
| AGCCTAGGTTTGGGAATACC+TGG | + | Chr4:88642211-88642230 | MsG0480023693.01.T01:CDS | 50.0% | |
| CAGTGGGATGATCCTGATTG+TGG | + | Chr4:88641209-88641228 | MsG0480023693.01.T01:CDS | 50.0% | |
| GAACCGAATTGGAAGTCCGA+AGG | - | Chr4:88640661-88640680 | None:intergenic | 50.0% | |
| GAAGCAAGTGGAGGAAGATG+TGG | + | Chr4:88641239-88641258 | MsG0480023693.01.T01:CDS | 50.0% | |
| GAGTAAGGGTTCACTGAAGG+TGG | - | Chr4:88640763-88640782 | None:intergenic | 50.0% | |
| GATGTCCACGGTGTAGCAAA+AGG | - | Chr4:88641101-88641120 | None:intergenic | 50.0% | |
| GTCCAGGTATTCCCAAACCT+AGG | - | Chr4:88642216-88642235 | None:intergenic | 50.0% | |
| TAAGGGTTCACTGAAGGTGG+TGG | - | Chr4:88640760-88640779 | None:intergenic | 50.0% | |
| TACCGGTGGAAGAGACGAAT+TGG | + | Chr4:88641150-88641169 | MsG0480023693.01.T01:CDS | 50.0% | |
| TCAGGATCATCCCACTGCAA+CGG | - | Chr4:88641206-88641225 | None:intergenic | 50.0% | |
| TTGGGAATACCTGGACTCCT+AGG | + | Chr4:88642220-88642239 | MsG0480023693.01.T01:CDS | 50.0% | |
| ! | ATCCTCCTTTTGCTACACCG+TGG | + | Chr4:88641093-88641112 | MsG0480023693.01.T01:CDS | 50.0% |
| ! | TGGGGGGTGCGTCATAATAA+AGG | - | Chr4:88642329-88642348 | None:intergenic | 50.0% |
| ! | TTCGTCAGCTTTGATACCGG+TGG | + | Chr4:88641136-88641155 | MsG0480023693.01.T01:CDS | 50.0% |
| !! | GGAGGAAGATGTGGATTGGT+TGG | + | Chr4:88641248-88641267 | MsG0480023693.01.T01:CDS | 50.0% |
| GTCCACGGTGTAGCAAAAGG+AGG | - | Chr4:88641098-88641117 | None:intergenic | 55.0% | |
| GTGGCGGTTTAGCCATGGTT+GGG | - | Chr4:88640418-88640437 | None:intergenic | 55.0% | |
| GTTTAGCCATGGTTGGGGAG+AGG | - | Chr4:88640412-88640431 | None:intergenic | 55.0% | |
| TGACTGTGGCGGTTTAGCCA+TGG | - | Chr4:88640423-88640442 | None:intergenic | 55.0% | |
| TGCACGTGAGGTCGAAACCT+GGG | - | Chr4:88640728-88640747 | None:intergenic | 55.0% | |
| TGGCGGTTTAGCCATGGTTG+GGG | - | Chr4:88640417-88640436 | None:intergenic | 55.0% | |
| TGTGGCGGTTTAGCCATGGT+TGG | - | Chr4:88640419-88640438 | None:intergenic | 55.0% | |
| !! | ACTGAAGGTGGTGGTGGTGT+TGG | - | Chr4:88640751-88640770 | None:intergenic | 55.0% |
| AGCCATGGTTGGGGAGAGGA+AGG | - | Chr4:88640408-88640427 | None:intergenic | 60.0% | |
| GCCATGGTTGGGGAGAGGAA+GGG | - | Chr4:88640407-88640426 | None:intergenic | 60.0% | |
| GTGCACGTGAGGTCGAAACC+TGG | - | Chr4:88640729-88640748 | None:intergenic | 60.0% | |
| TCCCTTCCTCTCCCCAACCA+TGG | + | Chr4:88640403-88640422 | MsG0480023693.01.T01:five_prime_UTR | 60.0% | |
| ! | GGGTTCACTGAAGGTGGTGG+TGG | - | Chr4:88640757-88640776 | None:intergenic | 60.0% |
| !! | TGGTGGTGTTGGTGCACGTG+AGG | - | Chr4:88640740-88640759 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 88640342 | 88642761 | 88640342 | ID=MsG0480023693.01;Name=MsG0480023693.01 |
| Chr4 | mRNA | 88640342 | 88642761 | 88640342 | ID=MsG0480023693.01.T01;Parent=MsG0480023693.01;Name=MsG0480023693.01.T01;_AED=0.32;_eAED=0.32;_QI=198|1|1|1|1|1|2|128|408 |
| Chr4 | exon | 88640342 | 88641314 | 88640342 | ID=MsG0480023693.01.T01:exon:7638;Parent=MsG0480023693.01.T01 |
| Chr4 | exon | 88642182 | 88642761 | 88642182 | ID=MsG0480023693.01.T01:exon:7639;Parent=MsG0480023693.01.T01 |
| Chr4 | five_prime_UTR | 88640342 | 88640539 | 88640342 | ID=MsG0480023693.01.T01:five_prime_utr;Parent=MsG0480023693.01.T01 |
| Chr4 | CDS | 88640540 | 88641314 | 88640540 | ID=MsG0480023693.01.T01:cds;Parent=MsG0480023693.01.T01 |
| Chr4 | CDS | 88642182 | 88642633 | 88642182 | ID=MsG0480023693.01.T01:cds;Parent=MsG0480023693.01.T01 |
| Chr4 | three_prime_UTR | 88642634 | 88642761 | 88642634 | ID=MsG0480023693.01.T01:three_prime_utr;Parent=MsG0480023693.01.T01 |
| Gene Sequence |
| Protein sequence |
