AlfalfaGEDB | MsG0580024325.01

M. sativa cultivar ZhongmuNo.1 / MsG0580024325.01

KEGG: K06688
GO: -
PFAM: PF00179

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024325.01.T01	XP_003610967.1	88.732	142	3	1	5	133	36	177	3.47E-86	259

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024325.01.T01	Q9LJZ5	80.435	138	14	1	5	129	40	177	1.29E-76	228

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024325.01.T01	G7K9A0	88.732	142	3	1	5	133	36	177	1.66e-86	259

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180004828.01	MsG0580024325.01	0.819992	8.679039e-53	6.782956e-50
MsG0180005655.01	MsG0580024325.01	0.807550	4.784626e-50	2.672697e-47
MsG0380011846.01	MsG0580024325.01	0.810663	1.030555e-50	6.249638e-48
MsG0480021773.01	MsG0580024325.01	0.805269	1.448324e-49	7.628989e-47
MsG0580024325.01	MsG0880044437.01	0.804975	1.668511e-49	8.723227e-47
MsG0580024325.01	MsG0880045647.01	0.807410	5.124675e-50	2.852353e-47
MsG0380017696.01	MsG0580024325.01	0.818875	1.560211e-52	1.182076e-49
MsG0380017913.01	MsG0580024325.01	0.805305	1.423125e-49	7.503302e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024325.01.T01	MTR_5g009020	88.732	142	3	1	5	133	36	177	4.21e-90	259
MsG0580024325.01.T01	MTR_4g076200	82.394	142	12	1	5	133	36	177	1.35e-83	243
MsG0580024325.01.T01	MTR_4g076200	92.308	117	9	0	17	133	20	136	2.97e-80	233
MsG0580024325.01.T01	MTR_1g095510	62.319	138	38	1	5	128	45	182	8.19e-57	175
MsG0580024325.01.T01	MTR_1g095510	67.544	114	37	0	15	128	15	128	6.07e-54	166
MsG0580024325.01.T01	MTR_1g095510	54.348	138	29	2	5	128	45	162	1.79e-43	140
MsG0580024325.01.T01	MTR_4g108080	44.776	134	67	2	3	129	13	146	3.03e-33	114
MsG0580024325.01.T01	MTR_8g468530	44.030	134	68	2	3	129	29	162	8.90e-33	113
MsG0580024325.01.T01	MTR_2g078010	50.526	95	47	0	24	118	41	135	1.74e-29	104
MsG0580024325.01.T01	MTR_2g078010	50.526	95	47	0	24	118	41	135	2.82e-29	104
MsG0580024325.01.T01	MTR_4g073240	47.872	94	49	0	20	113	4	97	3.28e-29	103
MsG0580024325.01.T01	MTR_4g108080	51.000	100	48	1	29	127	45	144	3.84e-29	103
MsG0580024325.01.T01	MTR_4g073240	47.872	94	49	0	20	113	33	126	5.55e-29	103
MsG0580024325.01.T01	MTR_5g075580	47.368	95	50	0	20	114	4	98	6.17e-29	102
MsG0580024325.01.T01	MTR_3g062450	47.368	95	50	0	20	114	33	127	9.77e-29	102
MsG0580024325.01.T01	MTR_5g075580	47.368	95	50	0	20	114	33	127	1.04e-28	102
MsG0580024325.01.T01	MTR_8g071040	45.631	103	55	1	20	121	33	135	1.07e-28	102
MsG0580024325.01.T01	MTR_7g116940	43.689	103	57	1	20	121	33	135	2.35e-28	101
MsG0580024325.01.T01	MTR_1g021150	45.455	99	54	0	20	118	33	131	2.77e-28	101
MsG0580024325.01.T01	MTR_1g021150	45.455	99	54	0	20	118	41	139	2.95e-28	101
MsG0580024325.01.T01	MTR_2g078010	53.659	82	38	0	37	118	68	149	2.72e-26	97.1
MsG0580024325.01.T01	MTR_7g116940	40.909	110	57	2	20	121	33	142	1.65e-25	94.7
MsG0580024325.01.T01	MTR_4g063490	35.938	128	68	2	16	129	33	160	2.20e-24	92.0
MsG0580024325.01.T01	MTR_4g108080	45.918	98	47	1	3	94	13	110	2.25e-23	88.2
MsG0580024325.01.T01	MTR_3g098780	41.489	94	54	1	22	114	37	130	6.47e-22	86.3
MsG0580024325.01.T01	MTR_2g096690	34.375	128	70	2	16	129	33	160	9.00e-22	85.5
MsG0580024325.01.T01	MTR_3g098780	41.489	94	54	1	22	114	61	154	9.02e-22	86.7
MsG0580024325.01.T01	MTR_2g096690	33.858	127	71	1	16	129	33	159	1.11e-21	85.1
MsG0580024325.01.T01	MTR_2g078010	52.941	68	32	0	24	91	41	108	1.53e-21	83.2
MsG0580024325.01.T01	MTR_7g116940	44.156	77	43	0	20	96	33	109	3.11e-21	83.2
MsG0580024325.01.T01	MTR_3g110110	39.796	98	58	1	17	113	34	131	4.15e-21	83.6
MsG0580024325.01.T01	MTR_4g094872	38.393	112	66	2	17	125	38	149	7.36e-20	80.5
MsG0580024325.01.T01	MTR_5g016630	36.752	117	71	2	16	129	37	153	8.47e-20	80.1
MsG0580024325.01.T01	MTR_8g085690	37.895	95	59	0	20	114	54	148	8.68e-19	77.8
MsG0580024325.01.T01	MTR_5g019480	38.824	85	52	0	29	113	21	105	3.01e-18	75.5
MsG0580024325.01.T01	MTR_4g106690	38.889	90	53	2	26	113	38	127	4.87e-18	76.3
MsG0580024325.01.T01	MTR_5g019480	38.824	85	52	0	29	113	69	153	6.37e-18	75.9
MsG0580024325.01.T01	MTR_5g019480	38.824	85	52	0	29	113	72	156	6.84e-18	75.9
MsG0580024325.01.T01	MTR_4g073240	50.820	61	30	0	53	113	4	64	1.88e-16	69.7
MsG0580024325.01.T01	MTR_8g098595	36.667	90	55	2	26	113	23	112	1.95e-16	71.6
MsG0580024325.01.T01	MTR_8g028920	35.556	90	56	2	26	113	38	127	4.44e-16	71.2
MsG0580024325.01.T01	MTR_8g028920	36.905	84	51	2	32	113	5	88	1.68e-15	68.6
MsG0580024325.01.T01	MTR_7g087590	35.000	100	64	1	24	122	46	145	2.40e-13	65.1
MsG0580024325.01.T01	MTR_8g076490	39.437	71	42	1	20	89	46	116	1.87e-12	61.2
MsG0580024325.01.T01	MTR_5g021260	39.437	71	42	1	20	89	46	116	4.13e-12	60.1
MsG0580024325.01.T01	MTR_2g096690	42.623	61	35	0	17	77	34	94	1.13e-11	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024325.01.T01	AT3G20060	80.435	138	14	1	5	129	40	177	1.31e-77	228
MsG0580024325.01.T01	AT1G50490	88.889	117	13	0	17	133	64	180	9.85e-76	223
MsG0580024325.01.T01	AT3G20060	89.474	114	12	0	16	129	19	132	1.58e-74	218
MsG0580024325.01.T01	AT2G02760	44.030	134	68	2	3	129	13	146	1.57e-32	112
MsG0580024325.01.T01	AT2G02760	44.030	134	68	2	3	129	13	146	1.57e-32	112
MsG0580024325.01.T01	AT2G02760	44.030	134	68	2	3	129	13	146	1.57e-32	112
MsG0580024325.01.T01	AT2G02760	44.030	134	68	2	3	129	13	146	1.57e-32	112
MsG0580024325.01.T01	AT1G14400	44.697	132	66	2	3	127	13	144	1.59e-32	112
MsG0580024325.01.T01	AT1G14400	44.697	132	66	2	3	127	13	144	1.59e-32	112
MsG0580024325.01.T01	AT5G62540	50.000	112	54	2	16	125	32	143	7.20e-32	110
MsG0580024325.01.T01	AT1G16890	51.579	95	46	0	24	118	8	102	3.29e-30	105
MsG0580024325.01.T01	AT1G78870	51.579	95	46	0	24	118	8	102	3.67e-30	105
MsG0580024325.01.T01	AT1G16890	51.579	95	46	0	24	118	41	135	6.32e-30	105
MsG0580024325.01.T01	AT1G78870	51.579	95	46	0	24	118	41	135	8.75e-30	105
MsG0580024325.01.T01	AT1G16890	51.579	95	46	0	24	118	50	144	1.36e-29	105
MsG0580024325.01.T01	AT2G16740	43.925	107	59	1	20	125	33	139	1.65e-29	104
MsG0580024325.01.T01	AT1G64230	42.241	116	59	1	7	114	54	169	3.11e-29	105
MsG0580024325.01.T01	AT1G64230	42.241	116	59	1	7	114	54	169	3.11e-29	105
MsG0580024325.01.T01	AT3G08700	43.243	111	62	1	17	126	31	141	5.48e-29	103
MsG0580024325.01.T01	AT3G08700	43.243	111	62	1	17	126	31	141	5.48e-29	103
MsG0580024325.01.T01	AT1G64230	47.368	95	50	0	20	114	33	127	1.19e-28	102
MsG0580024325.01.T01	AT1G64230	47.368	95	50	0	20	114	33	127	1.19e-28	102
MsG0580024325.01.T01	AT1G78870	51.042	96	46	1	24	118	8	103	1.60e-28	101
MsG0580024325.01.T01	AT1G64230	47.368	95	50	0	20	114	42	136	1.71e-28	102
MsG0580024325.01.T01	AT4G27960	44.444	99	55	0	20	118	33	131	2.07e-28	102
MsG0580024325.01.T01	AT5G56150	47.368	95	50	0	20	114	33	127	2.19e-28	102
MsG0580024325.01.T01	AT4G27960	44.000	100	56	0	20	119	63	162	5.87e-28	101
MsG0580024325.01.T01	AT5G41700	45.263	95	52	0	20	114	33	127	9.27e-28	100
MsG0580024325.01.T01	AT5G41700	45.263	95	52	0	20	114	33	127	9.27e-28	100
MsG0580024325.01.T01	AT5G41700	45.263	95	52	0	20	114	33	127	9.27e-28	100
MsG0580024325.01.T01	AT5G41700	45.263	95	52	0	20	114	34	128	1.01e-27	100
MsG0580024325.01.T01	AT3G08690	45.263	95	52	0	20	114	33	127	1.20e-27	100
MsG0580024325.01.T01	AT3G08690	45.263	95	52	0	20	114	33	127	1.20e-27	100
MsG0580024325.01.T01	AT5G53300	43.434	99	56	0	20	118	33	131	1.22e-27	100
MsG0580024325.01.T01	AT5G53300	43.434	99	56	0	20	118	33	131	1.22e-27	100
MsG0580024325.01.T01	AT5G53300	43.434	99	56	0	20	118	33	131	1.22e-27	100
MsG0580024325.01.T01	AT1G36340	44.660	103	57	0	16	118	35	137	7.32e-24	90.5
MsG0580024325.01.T01	AT1G36340	44.660	103	57	0	16	118	35	137	7.32e-24	90.5
MsG0580024325.01.T01	AT1G78870	52.778	72	34	0	24	95	41	112	2.57e-22	85.5
MsG0580024325.01.T01	AT3G55380	34.109	129	71	2	15	129	33	161	2.60e-22	87.0
MsG0580024325.01.T01	AT5G50870	37.956	137	64	5	1	122	2	132	4.61e-22	87.0
MsG0580024325.01.T01	AT5G50870	38.889	126	59	4	1	111	2	124	7.23e-22	86.7
MsG0580024325.01.T01	AT5G59300	33.333	129	72	2	15	129	32	160	8.02e-22	85.5
MsG0580024325.01.T01	AT3G46460	34.109	129	71	2	15	129	32	160	1.39e-21	85.1
MsG0580024325.01.T01	AT5G25760	39.394	99	59	1	16	113	33	131	3.15e-21	84.0
MsG0580024325.01.T01	AT5G25760	39.394	99	59	1	16	113	33	131	3.15e-21	84.0
MsG0580024325.01.T01	AT3G13550	38.318	107	66	0	20	126	68	174	1.47e-20	82.8
MsG0580024325.01.T01	AT5G56150	45.070	71	39	0	20	90	33	103	3.40e-20	79.7
MsG0580024325.01.T01	AT5G41700	42.667	75	43	0	20	94	33	107	5.01e-20	80.5
MsG0580024325.01.T01	AT1G63800	40.217	92	53	2	24	113	21	112	6.96e-20	80.9
MsG0580024325.01.T01	AT1G63800	40.217	92	53	2	24	113	36	127	7.24e-20	80.9
MsG0580024325.01.T01	AT5G53300	42.857	70	40	0	20	89	33	102	3.31e-19	77.4
MsG0580024325.01.T01	AT5G41340	41.111	90	51	2	26	113	38	127	4.69e-19	79.0
MsG0580024325.01.T01	AT3G57870	38.393	112	66	2	17	125	39	150	6.75e-19	77.8
MsG0580024325.01.T01	AT2G18600	41.558	77	45	0	37	113	79	155	3.67e-18	76.6
MsG0580024325.01.T01	AT2G18600	41.558	77	45	0	37	113	79	155	3.67e-18	76.6
MsG0580024325.01.T01	AT3G13550	40.741	81	48	0	20	100	68	148	2.60e-17	73.9
MsG0580024325.01.T01	AT5G41340	40.000	85	49	2	31	113	8	92	9.06e-17	72.0
MsG0580024325.01.T01	AT2G46030	37.634	93	56	2	23	113	35	127	1.19e-16	72.8
MsG0580024325.01.T01	AT2G46030	37.634	93	56	2	23	113	35	127	1.19e-16	72.8
MsG0580024325.01.T01	AT4G36800	36.471	85	54	0	29	113	70	154	1.44e-16	72.4
MsG0580024325.01.T01	AT4G36800	36.471	85	54	0	29	113	70	154	1.44e-16	72.4
MsG0580024325.01.T01	AT2G46030	37.634	93	56	2	23	113	38	130	2.01e-16	72.0
MsG0580024325.01.T01	AT2G46030	37.634	93	56	2	23	113	38	130	2.01e-16	72.0
MsG0580024325.01.T01	AT3G46460	33.333	111	60	2	33	129	8	118	2.32e-16	70.5
MsG0580024325.01.T01	AT3G46460	33.333	111	60	2	33	129	8	118	2.32e-16	70.5
MsG0580024325.01.T01	AT2G46030	37.634	93	56	2	23	113	107	199	2.63e-16	73.2
MsG0580024325.01.T01	AT3G24515	35.652	115	65	3	24	129	51	165	3.13e-16	73.9
MsG0580024325.01.T01	AT3G24515	35.652	115	65	3	24	129	76	190	3.13e-16	73.9
MsG0580024325.01.T01	AT5G05080	34.906	106	67	2	24	128	46	150	5.89e-14	66.6
MsG0580024325.01.T01	AT5G05080	34.906	106	67	2	24	128	46	150	5.89e-14	66.6
MsG0580024325.01.T01	AT5G05080	34.906	106	67	2	24	128	46	150	5.89e-14	66.6
MsG0580024325.01.T01	AT5G05080	34.906	106	67	2	24	128	46	150	5.89e-14	66.6
MsG0580024325.01.T01	AT1G45050	38.028	71	43	1	20	89	46	116	6.52e-12	59.7
MsG0580024325.01.T01	AT5G42990	38.028	71	43	1	20	89	46	116	1.68e-11	58.5
MsG0580024325.01.T01	AT2G32790	35.088	114	71	1	17	130	59	169	1.93e-11	58.9
MsG0580024325.01.T01	AT1G75440	38.028	71	43	1	20	89	46	116	3.58e-11	57.8
MsG0580024325.01.T01	AT4G36410	36.620	71	44	1	20	89	46	116	8.28e-11	57.0

Find 28 sgRNAs with CRISPR-Local

Find 52 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGACCTTTGGAGCCTTAAA+AGG	0.231384	5:+3411168	None:intergenic
CAGGTTGCAGTCTGAATTGA+TGG	0.339528	5:-3411595	MsG0580024325.01.T01:CDS
TATTTGCTTGGACATTCTTC+AGG	0.340447	5:-3411100	MsG0580024325.01.T01:intron
GTGGTGTCAAATTTGACCTT+TGG	0.405768	5:+3411156	None:intergenic
TTGCCATGCAAATCAACATT+GGG	0.409629	5:+3411123	None:intergenic
ATCCACAAGCAGCACAGCTT+TGG	0.411990	5:-3410787	MsG0580024325.01.T01:CDS
GTCTGAATTGATGGCTTTGA+TGG	0.419788	5:-3411586	MsG0580024325.01.T01:intron
TTTAGCGGCGAGCTAATGTT+TGG	0.426525	5:+3410809	None:intergenic
CACCCCAATGTTGATTTGCA+TGG	0.432591	5:-3411126	MsG0580024325.01.T01:CDS
CTCCAAAGCTGTGCTGCTTG+TGG	0.432715	5:+3410785	None:intergenic
AGCCTTAAAAGGATACTCAT+TGG	0.457477	5:+3411179	None:intergenic
GCCTTAAAAGGATACTCATT+GGG	0.466815	5:+3411180	None:intergenic
TTCTACAGAATACAGGAAGA+TGG	0.481814	5:-3410676	MsG0580024325.01.T01:intron
AGCAAAGACACTGTCTTTGA+AGG	0.498680	5:-3411231	MsG0580024325.01.T01:CDS
TTTCAAATTTACCTCCTAGC+AGG	0.498899	5:+3410911	None:intergenic
TGCTGGAAAGGAACAATAGC+AGG	0.507664	5:-3411255	MsG0580024325.01.T01:CDS
TTTGCATGGCAATATTTGCT+TGG	0.528158	5:-3411112	MsG0580024325.01.T01:CDS
TGAAGAGGACAATATTGTGC+TGG	0.531992	5:-3411272	MsG0580024325.01.T01:intron
AGGACAATATTGTGCTGGAA+AGG	0.548303	5:-3411267	MsG0580024325.01.T01:CDS
TTGTCAATTCAAAGCCTGCT+AGG	0.548402	5:-3410925	MsG0580024325.01.T01:CDS
GAGATCAAAGTTTAAGCAGC+AGG	0.549093	5:+3410633	None:intergenic
ATTGCCATGCAAATCAACAT+TGG	0.581157	5:+3411122	None:intergenic
TGTGCTGCTTGTGGATTTAG+CGG	0.595779	5:+3410794	None:intergenic
CAGCTTTGGAGCAATCAAGA+AGG	0.619795	5:-3410773	MsG0580024325.01.T01:intron
TCAATTCAAAGCCTGCTAGG+AGG	0.657162	5:-3410922	MsG0580024325.01.T01:intron
CATGCAAATCAACATTGGGG+TGG	0.679728	5:+3411127	None:intergenic
TGCCATGCAAATCAACATTG+GGG	0.689638	5:+3411124	None:intergenic
AACATTGGGGTGGAAGCATG+TGG	0.689650	5:+3411137	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATACAATTAACAAACA+GGG	+	Chr5:3411401-3411420	None:intergenic	15.0%
!!	AATTCATTAATGTGATTATT+TGG	-	Chr5:3410920-3410939	MsG0580024325.01.T01:intron	15.0%
!!	TAAAAATACAATTAACAAAC+AGG	+	Chr5:3411402-3411421	None:intergenic	15.0%
!!!	AATTGATTAATCTGTTTTAT+AGG	-	Chr5:3411264-3411283	MsG0580024325.01.T01:CDS	15.0%
!!	AAAATGTAATTAGATGGTAA+TGG	-	Chr5:3410782-3410801	MsG0580024325.01.T01:CDS	20.0%
!!	AAATGTAATTAGATGGTAAT+GGG	-	Chr5:3410783-3410802	MsG0580024325.01.T01:CDS	20.0%
!!	GACTTAAAAATGTAATTAGA+TGG	-	Chr5:3410776-3410795	MsG0580024325.01.T01:CDS	20.0%
!!!	AAGTGTTATATTATTGATTC+AGG	+	Chr5:3411365-3411384	None:intergenic	20.0%
!!!	AATCTGTTTTATAGGATAAA+TGG	-	Chr5:3411272-3411291	MsG0580024325.01.T01:intron	20.0%
!!!	TTAGTTTGTATAAATCAGTT+GGG	-	Chr5:3410886-3410905	MsG0580024325.01.T01:intron	20.0%
!	GAAAAGTGATGTGATTATTT+GGG	-	Chr5:3410814-3410833	MsG0580024325.01.T01:CDS	25.0%
!!	TAGTTTGTATAAATCAGTTG+GGG	-	Chr5:3410887-3410906	MsG0580024325.01.T01:intron	25.0%
!!!	CTTAGTTTGTATAAATCAGT+TGG	-	Chr5:3410885-3410904	MsG0580024325.01.T01:intron	25.0%
	GGAAAAGTGATGTGATTATT+TGG	-	Chr5:3410813-3410832	MsG0580024325.01.T01:CDS	30.0%
!	ACTTTTCTTCTACAGAATAC+AGG	-	Chr5:3411567-3411586	MsG0580024325.01.T01:intron	30.0%
!	GTCTAAAGCAATGTAATTTG+AGG	-	Chr5:3410754-3410773	MsG0580024325.01.T01:intron	30.0%
!!	TAGATGGTAATGGGATTATT+TGG	-	Chr5:3410792-3410811	MsG0580024325.01.T01:CDS	30.0%
	AGCCTTAAAAGGATACTCAT+TGG	+	Chr5:3411074-3411093	None:intergenic	35.0%
	ATTGCCATGCAAATCAACAT+TGG	+	Chr5:3411131-3411150	None:intergenic	35.0%
	GCCTTAAAAGGATACTCATT+GGG	+	Chr5:3411073-3411092	None:intergenic	35.0%
	TATTTGCTTGGACATTCTTC+AGG	-	Chr5:3411150-3411169	MsG0580024325.01.T01:CDS	35.0%
	TTCTACAGAATACAGGAAGA+TGG	-	Chr5:3411574-3411593	MsG0580024325.01.T01:intron	35.0%
	TTGCCATGCAAATCAACATT+GGG	+	Chr5:3411130-3411149	None:intergenic	35.0%
	TTTCAAATTTACCTCCTAGC+AGG	+	Chr5:3411342-3411361	None:intergenic	35.0%
	TTTGCATGGCAATATTTGCT+TGG	-	Chr5:3411138-3411157	MsG0580024325.01.T01:CDS	35.0%
!	TCCCAATGAGTATCCTTTTA+AGG	-	Chr5:3411069-3411088	MsG0580024325.01.T01:intron	35.0%
!!	TGGCTTTGATGGTAAGAAAT+TGG	-	Chr5:3410675-3410694	MsG0580024325.01.T01:intron	35.0%
	AGCAAAGACACTGTCTTTGA+AGG	-	Chr5:3411019-3411038	MsG0580024325.01.T01:intron	40.0%
	AGCACAATATTGTCCTCTTC+AGG	+	Chr5:3410979-3410998	None:intergenic	40.0%
	AGGACAATATTGTGCTGGAA+AGG	-	Chr5:3410983-3411002	MsG0580024325.01.T01:intron	40.0%
	GTGATTATTTGGCAGATGAG+TGG	-	Chr5:3410931-3410950	MsG0580024325.01.T01:CDS	40.0%
	TGAAGAGGACAATATTGTGC+TGG	-	Chr5:3410978-3410997	MsG0580024325.01.T01:intron	40.0%
	TGCCATGCAAATCAACATTG+GGG	+	Chr5:3411129-3411148	None:intergenic	40.0%
	TTGTCAATTCAAAGCCTGCT+AGG	-	Chr5:3411325-3411344	MsG0580024325.01.T01:intron	40.0%
!	GTGGTGTCAAATTTGACCTT+TGG	+	Chr5:3411097-3411116	None:intergenic	40.0%
!!	GTCTGAATTGATGGCTTTGA+TGG	-	Chr5:3410664-3410683	MsG0580024325.01.T01:CDS	40.0%
!!	TGTATCTGCTTTTCCTGAAG+AGG	-	Chr5:3410963-3410982	MsG0580024325.01.T01:CDS	40.0%
!!	TTGACCTTTGGAGCCTTAAA+AGG	+	Chr5:3411085-3411104	None:intergenic	40.0%
!!!	GTATCCTTTTAAGGCTCCAA+AGG	-	Chr5:3411078-3411097	MsG0580024325.01.T01:intron	40.0%
	CAGGTTGCAGTCTGAATTGA+TGG	-	Chr5:3410655-3410674	MsG0580024325.01.T01:CDS	45.0%
	CATGCAAATCAACATTGGGG+TGG	+	Chr5:3411126-3411145	None:intergenic	45.0%
	GTGTCAGTAGCATGTGATGA+TGG	-	Chr5:3411184-3411203	MsG0580024325.01.T01:CDS	45.0%
	TCAATTCAAAGCCTGCTAGG+AGG	-	Chr5:3411328-3411347	MsG0580024325.01.T01:intron	45.0%
	TGCTGGAAAGGAACAATAGC+AGG	-	Chr5:3410995-3411014	MsG0580024325.01.T01:intron	45.0%
	TTTAGCGGCGAGCTAATGTT+TGG	+	Chr5:3411444-3411463	None:intergenic	45.0%
!!	CACCCCAATGTTGATTTGCA+TGG	-	Chr5:3411124-3411143	MsG0580024325.01.T01:CDS	45.0%
!!	CAGCTTTGGAGCAATCAAGA+AGG	-	Chr5:3411477-3411496	MsG0580024325.01.T01:intron	45.0%
!!	TGTGCTGCTTGTGGATTTAG+CGG	+	Chr5:3411459-3411478	None:intergenic	45.0%
	ATCCACAAGCAGCACAGCTT+TGG	-	Chr5:3411463-3411482	MsG0580024325.01.T01:intron	50.0%
	TGGCAGATGAGTGGAGATTC+TGG	-	Chr5:3410940-3410959	MsG0580024325.01.T01:CDS	50.0%
!	AACATTGGGGTGGAAGCATG+TGG	+	Chr5:3411116-3411135	None:intergenic	50.0%
!!	CTCCAAAGCTGTGCTGCTTG+TGG	+	Chr5:3411468-3411487	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	3410644	3411628	3410644	ID=MsG0580024325.01;Name=MsG0580024325.01
Chr5	mRNA	3410644	3411628	3410644	ID=MsG0580024325.01.T01;Parent=MsG0580024325.01;Name=MsG0580024325.01.T01;_AED=0.41;_eAED=0.45;_QI=0\|0\|0\|1\|1\|1\|5\|0\|133
Chr5	exon	3411587	3411628	3411587	ID=MsG0580024325.01.T01:exon:2027;Parent=MsG0580024325.01.T01
Chr5	exon	3411101	3411289	3411101	ID=MsG0580024325.01.T01:exon:2026;Parent=MsG0580024325.01.T01
Chr5	exon	3410923	3410986	3410923	ID=MsG0580024325.01.T01:exon:2025;Parent=MsG0580024325.01.T01
Chr5	exon	3410774	3410833	3410774	ID=MsG0580024325.01.T01:exon:2024;Parent=MsG0580024325.01.T01
Chr5	exon	3410644	3410690	3410644	ID=MsG0580024325.01.T01:exon:2023;Parent=MsG0580024325.01.T01
Chr5	CDS	3411587	3411628	3411587	ID=MsG0580024325.01.T01:cds;Parent=MsG0580024325.01.T01
Chr5	CDS	3411101	3411289	3411101	ID=MsG0580024325.01.T01:cds;Parent=MsG0580024325.01.T01
Chr5	CDS	3410923	3410986	3410923	ID=MsG0580024325.01.T01:cds;Parent=MsG0580024325.01.T01
Chr5	CDS	3410774	3410833	3410774	ID=MsG0580024325.01.T01:cds;Parent=MsG0580024325.01.T01
Chr5	CDS	3410644	3410690	3410644	ID=MsG0580024325.01.T01:cds;Parent=MsG0580024325.01.T01

Gene Sequence

>MsG0580024325.01.T01

TTGCAATTTTGCAGGTTGCAGTCTGAATTGATGGCTTTGATGAGGACAATATTGTGCTGGAAAGGAACAATAGCAGGAAGCAAAGACACTGTCTTTGAAGGAACAGAATACAAATTGTCACTTTCATTTCCCAATGAGTATCCTTTTAAGGCTCCAAAGGTCAAATTTGACACCACATGCTTCCACCCCAATGTTGATTTGCATGGCAATATTTGCTTGGACATTCTTCAGGATAAATGGTCATCTGCTTATGATGTTAGAACAATTCTTTTGTCAATTCAAAGCCTGCTAGGAGAGCCAAACATTAGCTCGCCGCTAAATCCACAAGCAGCACAGCTTTGGAGCAATCAAGAAGAATACAGGAAGATGGTTGAGAAGTTGTACAAAGATCCTGCTGCTTAA

Protein sequence

>MsG0580024325.01.T01

LQFCRLQSELMALMRTILCWKGTIAGSKDTVFEGTEYKLSLSFPNEYPFKAPKVKFDTTCFHPNVDLHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNPQAAQLWSNQEEYRKMVEKLYKDPAA*