AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017913.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017913.01.T01 MTR_3g115050 99.632 544 2 0 1 544 1 544 0.0 1114
MsG0380017913.01.T01 MTR_1g026410 85.055 542 77 1 7 544 2 543 0.0 942
MsG0380017913.01.T01 MTR_4g075690 74.906 534 133 1 11 544 11 543 0.0 849
MsG0380017913.01.T01 MTR_4g049390 71.042 518 150 0 23 540 20 537 0.0 793
MsG0380017913.01.T01 MTR_2g088080 72.921 517 140 0 23 539 23 539 0.0 785
MsG0380017913.01.T01 MTR_4g048350 69.498 518 157 1 23 540 20 536 0.0 771
MsG0380017913.01.T01 MTR_4g132320 70.872 539 156 1 7 544 7 545 0.0 763
MsG0380017913.01.T01 MTR_4g075690 73.973 438 113 1 11 448 11 447 0.0 684
MsG0380017913.01.T01 MTR_2g088080 71.397 458 131 0 82 539 1 458 0.0 674
MsG0380017913.01.T01 MTR_8g479390 60.928 517 199 2 25 540 26 540 0.0 644
MsG0380017913.01.T01 MTR_5g018270 59.923 519 204 2 22 540 23 537 0.0 627
MsG0380017913.01.T01 MTR_8g479380 56.809 514 219 3 24 536 23 534 0.0 609
MsG0380017913.01.T01 MTR_4g083190 53.008 532 241 4 11 534 8 538 0.0 561
MsG0380017913.01.T01 MTR_4g083210 52.052 536 249 5 3 534 1 532 0.0 560
MsG0380017913.01.T01 MTR_3g083440 51.481 540 250 5 3 534 1 536 0.0 550
MsG0380017913.01.T01 MTR_3g083390 51.481 540 250 5 3 534 1 536 0.0 549
MsG0380017913.01.T01 MTR_3g083430 51.296 540 251 5 3 534 1 536 0.0 547
MsG0380017913.01.T01 MTR_3g083400 51.296 540 251 5 3 534 1 536 0.0 546
MsG0380017913.01.T01 MTR_3g083450 52.703 518 236 4 25 534 21 537 0.0 542
MsG0380017913.01.T01 MTR_4g101650 52.294 545 239 7 11 535 8 551 0.0 533
MsG0380017913.01.T01 MTR_3g008580 51.705 528 234 7 27 534 26 552 1.32e-180 521
MsG0380017913.01.T01 MTR_7g051440 52.632 532 226 9 27 537 26 552 8.74e-179 517
MsG0380017913.01.T01 MTR_3g083410 52.033 492 227 4 51 534 10 500 5.92e-176 506
MsG0380017913.01.T01 MTR_1g090707 48.106 528 262 7 19 535 12 538 9.02e-162 473
MsG0380017913.01.T01 MTR_4g133150 58.654 208 67 2 134 339 21 211 1.17e-71 228
MsG0380017913.01.T01 MTR_5g020620 30.351 570 347 18 5 533 1 561 8.31e-61 210
MsG0380017913.01.T01 MTR_5g020600 29.550 555 335 19 20 533 27 566 3.41e-57 201
MsG0380017913.01.T01 MTR_3g462760 28.014 564 363 13 5 533 1 556 1.27e-54 193
MsG0380017913.01.T01 MTR_5g069680 27.866 567 364 16 3 533 1 558 1.16e-53 191
MsG0380017913.01.T01 MTR_5g081810 29.026 534 336 13 35 533 4 529 3.60e-53 189
MsG0380017913.01.T01 MTR_4g015120 27.437 554 365 12 11 533 10 557 8.60e-50 180
MsG0380017913.01.T01 MTR_3g078740 25.413 606 348 21 11 537 8 588 1.99e-46 172
MsG0380017913.01.T01 MTR_3g078700 26.496 585 329 20 5 537 4 539 1.67e-45 168
MsG0380017913.01.T01 MTR_8g091390 25.818 581 335 18 20 538 26 572 1.09e-43 164
MsG0380017913.01.T01 MTR_2g008330 27.533 523 337 15 51 533 59 579 3.16e-42 159
MsG0380017913.01.T01 MTR_5g073210 28.846 572 342 21 12 533 4 560 3.20e-42 159
MsG0380017913.01.T01 MTR_3g101640 29.084 502 302 16 44 499 44 537 2.24e-40 154
MsG0380017913.01.T01 MTR_7g458880 24.357 583 380 16 2 533 8 580 5.31e-40 153
MsG0380017913.01.T01 MTR_3g101635 29.006 493 298 15 51 499 48 532 2.34e-39 151
MsG0380017913.01.T01 MTR_3g071890 27.745 501 314 14 51 510 54 547 6.83e-39 150
MsG0380017913.01.T01 MTR_8g027375 26.121 513 341 11 30 506 34 544 1.57e-38 149
MsG0380017913.01.T01 MTR_7g065980 28.827 503 299 20 47 498 42 536 2.67e-38 148
MsG0380017913.01.T01 MTR_3g078730 24.826 576 341 16 10 537 7 538 4.83e-38 147
MsG0380017913.01.T01 MTR_7g060460 23.827 554 367 15 30 533 33 581 1.20e-36 144
MsG0380017913.01.T01 MTR_7g058690 24.368 554 363 17 30 533 33 580 2.76e-36 142
MsG0380017913.01.T01 MTR_5g083360 25.992 504 309 15 48 499 42 533 2.06e-35 140
MsG0380017913.01.T01 MTR_7g062250 24.682 551 362 16 30 533 34 578 6.28e-35 139
MsG0380017913.01.T01 MTR_7g062310 25.095 526 339 16 21 499 42 559 1.07e-33 135
MsG0380017913.01.T01 MTR_7g065970 25.824 546 336 18 1 493 1 530 2.38e-33 134
MsG0380017913.01.T01 MTR_4g064530 25.382 524 320 18 29 499 46 551 5.65e-33 133
MsG0380017913.01.T01 MTR_4g019225 26.316 551 347 16 34 533 30 572 1.28e-31 129
MsG0380017913.01.T01 MTR_4g064530 24.855 519 320 18 30 493 44 547 1.15e-30 126
MsG0380017913.01.T01 MTR_4g133160 51.376 109 39 1 415 523 1 95 7.69e-29 110
MsG0380017913.01.T01 MTR_5g018290 62.121 66 25 0 475 540 5 70 4.25e-23 93.2
MsG0380017913.01.T01 MTR_5g081790 28.462 260 153 8 258 491 168 420 3.74e-12 68.9
MsG0380017913.01.T01 MTR_5g081790 24.868 189 126 5 8 188 6 186 9.02e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017913.01.T01 AT1G76160 79.777 539 108 1 6 544 4 541 0.0 908
MsG0380017913.01.T01 AT1G41830 79.104 536 111 1 9 544 8 542 0.0 894
MsG0380017913.01.T01 AT1G21850 74.187 523 133 2 19 541 18 538 0.0 814
MsG0380017913.01.T01 AT1G21860 70.130 539 155 3 2 540 5 537 0.0 796
MsG0380017913.01.T01 AT4G22010 69.444 540 161 2 6 544 5 541 0.0 781
MsG0380017913.01.T01 AT4G38420 67.844 538 167 3 12 543 12 549 0.0 760
MsG0380017913.01.T01 AT4G28090 62.152 539 192 6 9 540 8 541 0.0 692
MsG0380017913.01.T01 AT4G38420 66.596 470 151 3 12 475 12 481 0.0 645
MsG0380017913.01.T01 AT5G66920 58.189 519 215 1 22 540 29 545 0.0 637
MsG0380017913.01.T01 AT4G38420 67.043 443 140 3 12 448 12 454 0.0 608
MsG0380017913.01.T01 AT1G55570 54.917 539 233 4 10 539 9 546 0.0 592
MsG0380017913.01.T01 AT3G13400 54.851 536 232 5 11 538 9 542 0.0 582
MsG0380017913.01.T01 AT3G13400 54.851 536 232 5 11 538 9 542 0.0 582
MsG0380017913.01.T01 AT1G55560 53.918 536 237 5 11 538 8 541 0.0 578
MsG0380017913.01.T01 AT4G37160 53.817 524 236 3 22 544 23 541 0.0 572
MsG0380017913.01.T01 AT2G23630 54.943 526 233 3 17 542 23 544 0.0 569
MsG0380017913.01.T01 AT2G23630 54.943 526 233 3 17 542 18 539 0.0 569
MsG0380017913.01.T01 AT3G13390 55.556 522 222 4 26 538 24 544 0.0 568
MsG0380017913.01.T01 AT5G48450 52.865 541 238 10 12 537 8 546 0.0 546
MsG0380017913.01.T01 AT5G48450 52.865 541 238 10 12 537 8 546 0.0 546
MsG0380017913.01.T01 AT4G12420 52.102 547 241 7 11 537 6 551 0.0 544
MsG0380017913.01.T01 AT4G12420 52.102 547 241 7 11 537 6 551 0.0 544
MsG0380017913.01.T01 AT1G75790 49.534 537 260 3 11 536 8 544 0.0 526
MsG0380017913.01.T01 AT4G25240 50.452 553 253 8 1 534 1 551 0.0 525
MsG0380017913.01.T01 AT4G25240 50.452 553 253 8 1 534 1 551 0.0 525
MsG0380017913.01.T01 AT5G51480 49.813 536 248 9 19 534 17 551 0.0 525
MsG0380017913.01.T01 AT4G37160 54.673 428 192 2 22 448 23 449 1.56e-165 478
MsG0380017913.01.T01 AT4G39830 28.857 551 325 15 11 506 17 555 2.08e-55 196
MsG0380017913.01.T01 AT2G38080 27.339 545 352 13 25 533 22 558 4.92e-54 192
MsG0380017913.01.T01 AT5G58910 28.196 571 352 16 11 533 7 567 1.84e-52 188
MsG0380017913.01.T01 AT5G21105 27.586 551 326 16 12 507 22 554 1.10e-51 186
MsG0380017913.01.T01 AT5G03260 28.470 562 352 18 11 533 7 557 1.12e-51 186
MsG0380017913.01.T01 AT5G58910 29.032 527 320 15 51 533 50 566 6.19e-51 184
MsG0380017913.01.T01 AT5G21105 28.037 535 312 16 12 491 22 538 2.99e-50 181
MsG0380017913.01.T01 AT5G01190 27.580 533 354 12 32 533 27 558 1.20e-49 180
MsG0380017913.01.T01 AT5G21100 26.715 554 333 17 34 534 28 561 2.55e-49 179
MsG0380017913.01.T01 AT5G01190 28.210 514 337 12 51 533 32 544 4.16e-49 178
MsG0380017913.01.T01 AT5G58910 28.463 527 316 16 51 533 14 523 1.46e-46 171
MsG0380017913.01.T01 AT2G46570 25.603 539 352 13 30 527 32 562 1.88e-41 157
MsG0380017913.01.T01 AT4G39830 28.942 463 263 14 98 506 8 458 4.85e-41 155
MsG0380017913.01.T01 AT4G39830 28.942 463 263 14 98 506 10 460 5.76e-41 154
MsG0380017913.01.T01 AT2G30210 27.788 529 331 16 10 493 8 530 9.60e-41 155
MsG0380017913.01.T01 AT5G05390 28.138 494 314 13 44 499 41 531 7.76e-40 152
MsG0380017913.01.T01 AT5G09360 28.719 484 303 13 51 498 57 534 1.13e-39 152
MsG0380017913.01.T01 AT5G01050 25.508 541 348 13 41 535 39 570 1.17e-38 149
MsG0380017913.01.T01 AT5G01040 26.160 539 345 14 41 535 39 568 7.22e-38 147
MsG0380017913.01.T01 AT2G29130 25.501 549 359 17 30 533 30 573 9.68e-38 147
MsG0380017913.01.T01 AT5G48100 27.146 501 315 16 51 507 43 537 2.50e-37 145
MsG0380017913.01.T01 AT3G09220 26.769 523 338 13 10 493 11 527 3.28e-37 145
MsG0380017913.01.T01 AT4G39830 28.078 463 254 14 98 506 10 447 9.38e-37 142
MsG0380017913.01.T01 AT5G07130 28.063 506 306 16 51 506 45 542 1.34e-36 143
MsG0380017913.01.T01 AT1G18140 26.731 520 314 19 32 493 31 541 2.81e-35 140
MsG0380017913.01.T01 AT2G40370 25.174 576 375 15 12 533 7 580 3.50e-34 137
MsG0380017913.01.T01 AT2G46570 25.519 482 310 13 87 527 4 477 2.35e-33 133
MsG0380017913.01.T01 AT5G21105 28.746 327 194 9 206 507 51 363 1.27e-31 126
MsG0380017913.01.T01 AT3G09220 26.107 429 278 11 103 493 3 430 1.98e-26 112
MsG0380017913.01.T01 AT5G07130 27.155 464 280 16 93 506 2 457 8.47e-26 111
MsG0380017913.01.T01 AT5G07130 27.155 464 280 16 93 506 2 457 8.47e-26 111
MsG0380017913.01.T01 AT5G60020 25.784 287 194 7 5 279 6 285 3.18e-24 107
MsG0380017913.01.T01 AT5G60020 25.784 287 194 7 5 279 6 285 3.35e-24 107
MsG0380017913.01.T01 AT5G60020 27.386 241 162 6 51 279 14 253 1.12e-23 105

Find 181 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAAAGCAGCTGGCGGTTT+TGG 0.198928 3:-102135264 MsG0380017913.01.T01:CDS
AAATAGTTGTAAATGTTAAT+TGG 0.242479 3:+102137119 None:intergenic
CCACAAAGACGTGCATTCTT+TGG 0.246333 3:+102130670 None:intergenic
GGAGATTACACTGTCCTTAT+TGG 0.249934 3:-102135186 MsG0380017913.01.T01:CDS
GAACAATGTTCTCGTTGTTT+TGG 0.267342 3:+102131726 None:intergenic
ACTAGCATTATTATAAAGTA+TGG 0.274047 3:-102130367 MsG0380017913.01.T01:three_prime_UTR
TTCCAGTTGAAGAATTTATA+AGG 0.277879 3:+102136955 None:intergenic
GGCTACTCTTTCTTTGTTGT+TGG 0.288891 3:-102131686 MsG0380017913.01.T01:CDS
GGAACTTGAGGACCGAGTTT+TGG 0.289721 3:-102130771 MsG0380017913.01.T01:CDS
GGGAAAGGAACTGGAATTCT+AGG 0.292928 3:+102135219 None:intergenic
AGCTCTCCTGGTCAGGTTAA+TGG 0.304843 3:-102131938 MsG0380017913.01.T01:CDS
TCATTCGAAGATGGTGTTTC+GGG 0.308208 3:-102135384 MsG0380017913.01.T01:CDS
CTCATTCGAAGATGGTGTTT+CGG 0.314795 3:-102135385 MsG0380017913.01.T01:CDS
AACTCTGCAGGCGCAGTATC+AGG 0.316792 3:-102132450 MsG0380017913.01.T01:CDS
GTGTAATCTCCAGCTGGTTC+AGG 0.327562 3:+102135198 None:intergenic
ATCCTTATAAATTCTTCAAC+TGG 0.330656 3:-102136957 MsG0380017913.01.T01:CDS
CTTCAAGTGAAGGATCAAAT+TGG 0.340873 3:-102135318 MsG0380017913.01.T01:CDS
TGGTAGGATCCTTGTGGGTT+AGG 0.342056 3:+102132001 None:intergenic
GTTCAGAGCTATCATCTTGA+TGG 0.346311 3:-102131707 MsG0380017913.01.T01:CDS
TAAAGGTATATCCCTATTCA+TGG 0.349134 3:-102130831 MsG0380017913.01.T01:intron
ATCAATGGTCGTGGACCTAA+TGG 0.358266 3:-102132857 MsG0380017913.01.T01:CDS
ATAAATAGCCGTCCATGAAT+AGG 0.359487 3:+102130819 None:intergenic
AAGTTCCTCCCTGGTGGGAT+GGG 0.362034 3:+102135351 None:intergenic
GCTACTCTTTCTTTGTTGTT+GGG 0.364251 3:-102131685 MsG0380017913.01.T01:intron
GCGAGCTTAAGAGGCGTGTC+TGG 0.366650 3:+102131875 None:intergenic
GGGAGGGGTCAGAAATGATT+AGG 0.372948 3:+102137207 None:intergenic
GATCCTTGTGGGTTAGGCCT+TGG 0.380517 3:+102132007 None:intergenic
TACAACAAAGACAATCATTC+TGG 0.381020 3:-102131963 MsG0380017913.01.T01:CDS
TAGGTCCACGACCATTGATT+AGG 0.384593 3:+102132861 None:intergenic
ACGTTGAATGATAATCCATT+AGG 0.386904 3:+102132842 None:intergenic
TAAACCTTTGCTAGCTCAAA+GGG 0.388940 3:+102130621 None:intergenic
CCAAAGAATGCACGTCTTTG+TGG 0.391415 3:-102130670 MsG0380017913.01.T01:CDS
GTTAATGGCAAGCAAAGATA+TGG 0.394297 3:-102131923 MsG0380017913.01.T01:CDS
GAATGTCTGGACCAGGGAAT+TGG 0.394900 3:+102136745 None:intergenic
ACACTGTCCTTATTGGTGAT+TGG 0.395975 3:-102135179 MsG0380017913.01.T01:CDS
CGAATGAGTTCCTTCTCTGC+TGG 0.403249 3:+102135400 None:intergenic
AAGTAATCAGCGAGCTTAAG+AGG 0.406604 3:+102131866 None:intergenic
AGACGTGCATTCTTTGGAAT+AGG 0.410783 3:+102130676 None:intergenic
ACTTGTACCAATCACCAATA+AGG 0.411862 3:+102135172 None:intergenic
ATCATTCTGGCTAGCTCTCC+TGG 0.412395 3:-102131950 MsG0380017913.01.T01:CDS
TAAATAGCCGTCCATGAATA+GGG 0.412871 3:+102130820 None:intergenic
CTTCTACCAACTTCAGTTTG+TGG 0.415762 3:+102132643 None:intergenic
AATACCTGATTGAGCGGGCT+TGG 0.429385 3:+102132382 None:intergenic
TCTGGCTAGCTCTCCTGGTC+AGG 0.435795 3:-102131945 MsG0380017913.01.T01:CDS
GAAGTTCCTCCCTGGTGGGA+TGG 0.436120 3:+102135350 None:intergenic
GCCTTGGTCCACTTGCTGTA+AGG 0.436164 3:+102132023 None:intergenic
GCTGGTTCAGGGAAAGGAAC+TGG 0.441020 3:+102135210 None:intergenic
TGAACCAAGCCCGCTCAATC+AGG 0.441372 3:-102132386 MsG0380017913.01.T01:intron
ATTGAAAGCCCATCTTGATA+AGG 0.446007 3:-102132912 MsG0380017913.01.T01:CDS
AACTGCTGATCAACCTTCTC+AGG 0.451706 3:-102132544 MsG0380017913.01.T01:CDS
GACCAATCAACTTGGATTGT+AGG 0.454328 3:+102132411 None:intergenic
TTACAGGGTATATTGATCAA+TGG 0.457119 3:-102136768 MsG0380017913.01.T01:intron
TTGAAAGCCCATCTTGATAA+GGG 0.458638 3:-102132911 MsG0380017913.01.T01:CDS
TGGACAACTTCTAGCAGAAA+CGG 0.460958 3:-102131407 MsG0380017913.01.T01:CDS
GTTCCTTTCCCTGAACCAGC+TGG 0.461491 3:-102135207 MsG0380017913.01.T01:CDS
ATTAGGACTCCATCAGGTAT+AGG 0.466437 3:+102132878 None:intergenic
AGTTCCTCCCTGGTGGGATG+GGG 0.469341 3:+102135352 None:intergenic
ACTCTCAATTTAGCTGCTGT+TGG 0.471199 3:-102137033 MsG0380017913.01.T01:CDS
GCTTCTTTCCCTTATCAAGA+TGG 0.472069 3:+102132903 None:intergenic
CTTCTTTCCCTTATCAAGAT+GGG 0.472616 3:+102132904 None:intergenic
AAACGCGTAAATAAAATTGT+TGG 0.475981 3:+102130731 None:intergenic
TTTGTAACAGAATGAATGTC+TGG 0.477062 3:+102136732 None:intergenic
TACGGTGACATTTACCCACT+TGG 0.481704 3:-102136925 MsG0380017913.01.T01:CDS
TGTAATCTCCAGCTGGTTCA+GGG 0.488077 3:+102135199 None:intergenic
AAGACACCGCGGAAGTGAAA+AGG 0.488846 3:+102130233 None:intergenic
CCACAAGGATCCTACCATTA+CGG 0.488883 3:-102131995 MsG0380017913.01.T01:CDS
TTCAACTGGAATGTTACTTA+CGG 0.490501 3:-102136943 MsG0380017913.01.T01:CDS
CGTCTTTGTGGTAGGGCAAG+TGG 0.492438 3:-102130658 MsG0380017913.01.T01:CDS
TGCTTGCCATTAACCTGACC+AGG 0.497002 3:+102131932 None:intergenic
GGAGGGGTCAGAAATGATTA+GGG 0.500859 3:+102137208 None:intergenic
CCCACTTGGAGTTCGTCAAA+GGG 0.500885 3:-102136911 MsG0380017913.01.T01:intron
GACCTACAATCCAAGTTGAT+TGG 0.501737 3:-102132413 MsG0380017913.01.T01:CDS
CAGGAAAGACTTATAGACTT+AGG 0.506224 3:-102132713 MsG0380017913.01.T01:CDS
CTCCTCACTTGATGTTCATG+TGG 0.506285 3:-102132589 MsG0380017913.01.T01:CDS
ATTGTATCATACCGTATGGT+TGG 0.507927 3:+102135149 None:intergenic
GTCTTTGTGGTAGGGCAAGT+GGG 0.508618 3:-102130657 MsG0380017913.01.T01:CDS
ACAACATGCCCCATCCCACC+AGG 0.510773 3:-102135360 MsG0380017913.01.T01:CDS
TCTCCAGCTGGTTCAGGGAA+AGG 0.511026 3:+102135204 None:intergenic
ACCCACTTGGAGTTCGTCAA+AGG 0.514899 3:-102136912 MsG0380017913.01.T01:CDS
CTTCGCTATAGCAACTCTGC+AGG 0.516465 3:-102132462 MsG0380017913.01.T01:CDS
TCAAAACCACAAACTGAAGT+TGG 0.517789 3:-102132649 MsG0380017913.01.T01:CDS
GGACAACTTCTAGCAGAAAC+GGG 0.518926 3:-102131406 MsG0380017913.01.T01:CDS
TTGATCAATGGCCAATTCCC+TGG 0.519402 3:-102136756 MsG0380017913.01.T01:CDS
AGTGGTGGTGAGAATCTTAG+AGG 0.523161 3:+102132491 None:intergenic
ACTTGGATTGTAGGTCCACC+AGG 0.525149 3:+102132420 None:intergenic
ATGAACCCTTTCTCATCTCA+TGG 0.525350 3:-102136674 MsG0380017913.01.T01:intron
CAAACTGAAGTTGGTAGAAG+TGG 0.526063 3:-102132640 MsG0380017913.01.T01:CDS
AGGACTAACCTTACAGCAAG+TGG 0.527132 3:-102132031 MsG0380017913.01.T01:CDS
CCTGATGGAGTCCTAATCAA+TGG 0.528672 3:-102132872 MsG0380017913.01.T01:CDS
TCACAGATGTGTCAAGGTAA+AGG 0.529173 3:+102131786 None:intergenic
CTAGCATTTCAGAAAGCAGC+TGG 0.529779 3:-102135273 MsG0380017913.01.T01:CDS
GGTTCAAAGACCAATCAACT+TGG 0.532843 3:+102132403 None:intergenic
CTTGTACCATGAGATGAGAA+AGG 0.533419 3:+102136668 None:intergenic
GCTGATTACTTCAAAATCTC+CGG 0.535779 3:-102131854 MsG0380017913.01.T01:CDS
CGAGCTTAAGAGGCGTGTCT+GGG 0.536643 3:+102131876 None:intergenic
TTAAACCTTTGCTAGCTCAA+AGG 0.539316 3:+102130620 None:intergenic
TAGGGAGGTGCGGTGCAAGA+AGG 0.541201 3:+102137226 None:intergenic
ATTTCAATGTGTAGTATGGA+TGG 0.541372 3:-102131437 MsG0380017913.01.T01:intron
AGAATGCACGTCTTTGTGGT+AGG 0.541610 3:-102130666 MsG0380017913.01.T01:CDS
AAGAAGCTTCCTATACCTGA+TGG 0.542552 3:-102132887 MsG0380017913.01.T01:CDS
TCTGAGAGACCCACTGGTGG+TGG 0.543627 3:-102131809 MsG0380017913.01.T01:CDS
AAGGTAAAGGCCACCACCAG+TGG 0.545521 3:+102131799 None:intergenic
AGGAAACTCGTCTCTGATTG+AGG 0.545951 3:+102130696 None:intergenic
CCATTGATTAGGACTCCATC+AGG 0.546662 3:+102132872 None:intergenic
GTGACAAGGATTGCAGAAGT+TGG 0.550179 3:-102130345 MsG0380017913.01.T01:three_prime_UTR
CATCCATTCCATGCTTGAGA+AGG 0.551848 3:-102130594 MsG0380017913.01.T01:three_prime_UTR
AGAAGGAACTCATTCGAAGA+TGG 0.555890 3:-102135393 MsG0380017913.01.T01:CDS
CGTAATGGTAGGATCCTTGT+GGG 0.556156 3:+102131996 None:intergenic
CTAGAATGCCTTCTCAAGCA+TGG 0.557137 3:+102130586 None:intergenic
AGGGAGGTGCGGTGCAAGAA+GGG 0.557743 3:+102137227 None:intergenic
GTAAGCATTGCCGCGTAGAG+AGG 0.558899 3:-102137093 MsG0380017913.01.T01:five_prime_UTR
TTCATTTGATGTATTGAATG+TGG 0.561182 3:-102130296 MsG0380017913.01.T01:three_prime_UTR
GGAATGGGATCCAGCAGAGA+AGG 0.564212 3:-102135410 MsG0380017913.01.T01:CDS
GCTTTCTGAAATGCTAGAGA+TGG 0.570090 3:+102135279 None:intergenic
TTGTACCATGAGATGAGAAA+GGG 0.571758 3:+102136669 None:intergenic
ACAGAATGAATGTCTGGACC+AGG 0.572143 3:+102136738 None:intergenic
TTGTATTTATGAGACCGTAA+TGG 0.573182 3:+102131981 None:intergenic
TGTTGAAGACATTGATAATG+AGG 0.576283 3:+102136703 None:intergenic
ATGCCTTCTCAAGCATGGAA+TGG 0.576826 3:+102130591 None:intergenic
AGCATATCTGAGAGACCCAC+TGG 0.578496 3:-102131815 MsG0380017913.01.T01:CDS
GAATGCACGTCTTTGTGGTA+GGG 0.578512 3:-102130665 MsG0380017913.01.T01:CDS
CACTTGACAACGTTGGAATG+TGG 0.580641 3:-102130792 MsG0380017913.01.T01:CDS
CACTTATATACTTCAAGTGA+AGG 0.581224 3:-102135328 MsG0380017913.01.T01:CDS
TATGTTGCACTTGACAACGT+TGG 0.582455 3:-102130799 MsG0380017913.01.T01:CDS
GGAGTCCTAATCAATGGTCG+TGG 0.582546 3:-102132866 MsG0380017913.01.T01:CDS
ATACTGTCGTGCCCAAAACT+CGG 0.586339 3:+102130759 None:intergenic
TTATCATTCAACGTTGAACA+AGG 0.591618 3:-102132833 MsG0380017913.01.T01:intron
AATCTTAGAGGAGAATCTTG+TGG 0.591739 3:+102132503 None:intergenic
AGGACAGTGTAATCTCCAGC+TGG 0.591788 3:+102135192 None:intergenic
GTGGTCGTTCTTGATACGAC+AGG 0.597343 3:+102130485 None:intergenic
ACCCTTTGACGAACTCCAAG+TGG 0.599197 3:+102136910 None:intergenic
AACCTTTGCTAGCTCAAAGG+GGG 0.603610 3:+102130623 None:intergenic
AGTAGCAACACATAGAAGCA+AGG 0.603929 3:+102137008 None:intergenic
AGTAGCACGTTGCACCACTC+AGG 0.606940 3:-102131366 MsG0380017913.01.T01:intron
CTGAAGTTGGTAGAAGTGGA+AGG 0.607607 3:-102132636 MsG0380017913.01.T01:CDS
AGTGAAATACCTGATTGAGC+GGG 0.607815 3:+102132377 None:intergenic
ATATAAGTGAAGTTCCTCCC+TGG 0.613485 3:+102135342 None:intergenic
CCGTAATGGTAGGATCCTTG+TGG 0.613529 3:+102131995 None:intergenic
AAGTGAAATACCTGATTGAG+CGG 0.617943 3:+102132376 None:intergenic
GTCTGAAAGACCTCAGCTCG+AGG 0.618688 3:-102130453 MsG0380017913.01.T01:three_prime_UTR
ACGTTGGAATGTGGAACTTG+AGG 0.618713 3:-102130783 MsG0380017913.01.T01:CDS
ATAGCGAAGCACCGCAGTGG+TGG 0.618940 3:+102132476 None:intergenic
ACAATGTAGTAGTCCTGAGA+AGG 0.622508 3:+102132531 None:intergenic
ATTTATGAGACCGTAATGGT+AGG 0.623341 3:+102131985 None:intergenic
TTGGTACAAGTCCAACCATA+CGG 0.625373 3:-102135160 MsG0380017913.01.T01:intron
TCCTCACTTGATGTTCATGT+GGG 0.629604 3:-102132588 MsG0380017913.01.T01:CDS
TAAGTGAAGTTCCTCCCTGG+TGG 0.629747 3:+102135345 None:intergenic
AAGAATGTGACCTCGAGCTG+AGG 0.629756 3:+102130443 None:intergenic
CTTGGATTGTAGGTCCACCA+GGG 0.631318 3:+102132421 None:intergenic
AAGTGAAGTTCCTCCCTGGT+GGG 0.631783 3:+102135346 None:intergenic
TATTATAAAGTATGGTGACA+AGG 0.633317 3:-102130359 MsG0380017913.01.T01:three_prime_UTR
CTTGCATCACAGATGTGTCA+AGG 0.635259 3:+102131780 None:intergenic
GGTATATCCCTATTCATGGA+CGG 0.635653 3:-102130827 MsG0380017913.01.T01:CDS
ACCTTACAGCAAGTGGACCA+AGG 0.643171 3:-102132024 MsG0380017913.01.T01:CDS
CAGAAATGATTAGGGAGGTG+CGG 0.649286 3:+102137216 None:intergenic
GAGGCATTAGGATACTCAGT+AGG 0.651245 3:-102135242 MsG0380017913.01.T01:CDS
AACATCAAGTGAGGAGTACG+TGG 0.656057 3:+102132596 None:intergenic
AGGTAAAGGCCACCACCAGT+GGG 0.656498 3:+102131800 None:intergenic
GGACCAAGGCCTAACCCACA+AGG 0.659246 3:-102132010 MsG0380017913.01.T01:CDS
CCCTTTGACGAACTCCAAGT+GGG 0.661178 3:+102136911 None:intergenic
TCAATGTGTAGTATGGATGG+AGG 0.663408 3:-102131434 MsG0380017913.01.T01:intron
GCATTTCAGAAAGCAGCTGG+CGG 0.666254 3:-102135270 MsG0380017913.01.T01:CDS
TTCTCAGGACTACTACATTG+TGG 0.670612 3:-102132529 MsG0380017913.01.T01:CDS
CAACATGCCCCATCCCACCA+GGG 0.673364 3:-102135359 MsG0380017913.01.T01:CDS
CAGAATGAATGTCTGGACCA+GGG 0.674239 3:+102136739 None:intergenic
TCCCACATGAACATCAAGTG+AGG 0.677217 3:+102132587 None:intergenic
AAAACTCTTGCCTCTCTACG+CGG 0.677360 3:+102137083 None:intergenic
TAATATGATTCTCACCTGAG+TGG 0.682067 3:+102131352 None:intergenic
TTGGATTGTAGGTCCACCAG+GGG 0.683406 3:+102132422 None:intergenic
TAGACTTAGGATATCAAACG+TGG 0.688014 3:-102132700 MsG0380017913.01.T01:CDS
AAACCTTTGCTAGCTCAAAG+GGG 0.688074 3:+102130622 None:intergenic
GCTATAGCGAAGCACCGCAG+TGG 0.699087 3:+102132473 None:intergenic
AGGTCTTTCAGACTCAAACG+TGG 0.710556 3:+102130463 None:intergenic
GGGGTCAGAAATGATTAGGG+AGG 0.714872 3:+102137211 None:intergenic
ATATCTGAGAGACCCACTGG+TGG 0.716405 3:-102131812 MsG0380017913.01.T01:CDS
TCTTTCAGACTCAAACGTGG+TGG 0.724306 3:+102130466 None:intergenic
AGACTTAGGATATCAAACGT+GGG 0.728394 3:-102132699 MsG0380017913.01.T01:CDS
CATGCCCCATCCCACCAGGG+AGG 0.735313 3:-102135356 MsG0380017913.01.T01:CDS
GTAGTATGGATGGAGGACAG+TGG 0.742907 3:-102131427 MsG0380017913.01.T01:intron
TGGATTGTAGGTCCACCAGG+GGG 0.761885 3:+102132423 None:intergenic
TAAGATTCTCACCACCACTG+CGG 0.773633 3:-102132487 MsG0380017913.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAATAAATAAAAAA+TGG + Chr3:102130635-102130654 None:intergenic 0.0%
!! AAATTAAAACATTTAAAAAG+TGG + Chr3:102131507-102131526 None:intergenic 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + Chr3:102136258-102136277 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + Chr3:102136259-102136278 None:intergenic 10.0%
!! TTAAACATTACTTATTTATT+TGG - Chr3:102135851-102135870 MsG0380017913.01.T01:intron 10.0%
!!! AAAATTTTAGATAATACAAA+GGG + Chr3:102137035-102137054 None:intergenic 10.0%
!!! AATAAGTTACAAAAAAATTT+TGG + Chr3:102133961-102133980 None:intergenic 10.0%
!!! CTTATAAATCAATTTTAAAA+TGG + Chr3:102130828-102130847 None:intergenic 10.0%
!!! TAAAATTTTAGATAATACAA+AGG + Chr3:102137036-102137055 None:intergenic 10.0%
!!! TTAAAATGAATTTTTTTACA+AGG - Chr3:102132910-102132929 MsG0380017913.01.T01:CDS 10.0%
!!! TTATTTAAAAAAACTTTTCT+TGG - Chr3:102134102-102134121 MsG0380017913.01.T01:intron 10.0%
!! AAAATTGTGTCAATTAAATT+GGG - Chr3:102136294-102136313 MsG0380017913.01.T01:intron 15.0%
!! AAATAGTTGTAAATGTTAAT+TGG + Chr3:102130306-102130325 None:intergenic 15.0%
!! AATTTAAAAAGTTAAACTCA+CGG - Chr3:102132673-102132692 MsG0380017913.01.T01:CDS 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + Chr3:102136257-102136276 None:intergenic 15.0%
!! ATATTACATATTATATGCAT+CGG + Chr3:102132601-102132620 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + Chr3:102136193-102136212 None:intergenic 15.0%
!! CATAAATATTATATGTTGTA+AGG + Chr3:102135304-102135323 None:intergenic 15.0%
!! GAAATTGAAACATATAATAT+AGG + Chr3:102130600-102130619 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + Chr3:102136194-102136213 None:intergenic 15.0%
!! TGTATATTAGTAGAAAAATA+CGG + Chr3:102131669-102131688 None:intergenic 15.0%
!! TTTATCTATCAAAATGAAAA+AGG - Chr3:102130955-102130974 MsG0380017913.01.T01:intron 15.0%
!!! ACATATATAGTATTCTTTTT+CGG + Chr3:102137011-102137030 None:intergenic 15.0%
!!! ATTTTTCTACTAATATACAA+AGG - Chr3:102131670-102131689 MsG0380017913.01.T01:intron 15.0%
!!! TTGATTTTGTATTTTCTTAA+AGG - Chr3:102136574-102136593 MsG0380017913.01.T01:intron 15.0%
!! AATAGTAAAAGGTTAATTGA+TGG + Chr3:102131407-102131426 None:intergenic 20.0%
!! AATTATTTCAATGTGTAGTA+TGG - Chr3:102135981-102136000 MsG0380017913.01.T01:intron 20.0%
!! ACTAGCATTATTATAAAGTA+TGG - Chr3:102137055-102137074 MsG0380017913.01.T01:exon 20.0%
!! AGGAATTTATTAACATTATG+TGG - Chr3:102134474-102134493 MsG0380017913.01.T01:intron 20.0%
!! AGTTAGAAACAAAAGAAATT+GGG + Chr3:102136544-102136563 None:intergenic 20.0%
!! ATACTCTAGTAAGAATATTT+GGG + Chr3:102133093-102133112 None:intergenic 20.0%
!! ATAGTAAAAGGTTAATTGAT+GGG + Chr3:102131406-102131425 None:intergenic 20.0%
!! ATGAAATAGCTATAAAAAGA+AGG + Chr3:102132310-102132329 None:intergenic 20.0%
!! ATTTAAAAAGTTAAACTCAC+GGG - Chr3:102132674-102132693 MsG0380017913.01.T01:CDS 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG - Chr3:102136293-102136312 MsG0380017913.01.T01:intron 20.0%
!! CTATTGTAAAACAAAAAAAC+CGG - Chr3:102133692-102133711 MsG0380017913.01.T01:intron 20.0%
!! CTTAAATTCGTATAAAGAAA+TGG + Chr3:102132709-102132728 None:intergenic 20.0%
!! CTTTATACGAATTTAAGAAA+TGG - Chr3:102132712-102132731 MsG0380017913.01.T01:CDS 20.0%
!! GATAATCTAATTCATATCTT+TGG - Chr3:102131207-102131226 MsG0380017913.01.T01:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+AGG + Chr3:102136160-102136179 None:intergenic 20.0%
!! TAGTCATTTATTTAAAGAGT+AGG + Chr3:102135279-102135298 None:intergenic 20.0%
!! TATACTCTAGTAAGAATATT+TGG + Chr3:102133094-102133113 None:intergenic 20.0%
!! TATTCATTCACTAAACAATA+TGG - Chr3:102132337-102132356 MsG0380017913.01.T01:intron 20.0%
!! TATTGTAAAACAAAAAAACC+GGG - Chr3:102133693-102133712 MsG0380017913.01.T01:intron 20.0%
!! TCAAATTTGTGTATTTAAAC+CGG - Chr3:102134386-102134405 MsG0380017913.01.T01:intron 20.0%
!! TTAAAAATGAAAGAAAGATG+TGG + Chr3:102132894-102132913 None:intergenic 20.0%
!! TTAAATCCACATTTCTTAAA+CGG + Chr3:102131977-102131996 None:intergenic 20.0%
!! TTAAGTATCTTAAAACTTGT+AGG + Chr3:102133555-102133574 None:intergenic 20.0%
!! TTACTAGAGTATAGATTTAA+TGG - Chr3:102133101-102133120 MsG0380017913.01.T01:intron 20.0%
!! TTTAATGGTCAAAATTTGAT+TGG - Chr3:102133116-102133135 MsG0380017913.01.T01:intron 20.0%
!!! AAAATTGCACATTTTCAAAT+GGG + Chr3:102131629-102131648 None:intergenic 20.0%
!!! TATTTTGACAATATTCATTG+AGG + Chr3:102131730-102131749 None:intergenic 20.0%
!!! TTAGAATGTATTTTTTCATC+CGG + Chr3:102134408-102134427 None:intergenic 20.0%
! AAACGCGTAAATAAAATTGT+TGG + Chr3:102136694-102136713 None:intergenic 25.0%
! AATACTAGTACTAGTATAGT+TGG + Chr3:102133410-102133429 None:intergenic 25.0%
! AATTAAATACGTAGTCAGAT+CGG + Chr3:102133238-102133257 None:intergenic 25.0%
! ACACTAATCACATGATTATT+TGG + Chr3:102130890-102130909 None:intergenic 25.0%
! ACATTTAAATGTGAAGAAGT+GGG - Chr3:102132557-102132576 MsG0380017913.01.T01:CDS 25.0%
! ACTGTATTACATGAATTTAG+TGG - Chr3:102131889-102131908 MsG0380017913.01.T01:CDS 25.0%
! AGGTATTAATGTTACTAGTT+GGG - Chr3:102131181-102131200 MsG0380017913.01.T01:intron 25.0%
! ATCCTTATAAATTCTTCAAC+TGG - Chr3:102130465-102130484 MsG0380017913.01.T01:three_prime_UTR 25.0%
! ATTAATTGTATCATACCGTA+TGG + Chr3:102132280-102132299 None:intergenic 25.0%
! CAGTTAGAAACAAAAGAAAT+TGG + Chr3:102136545-102136564 None:intergenic 25.0%
! CATATAACAAACATTCAAAG+TGG + Chr3:102130988-102131007 None:intergenic 25.0%
! CTAATTAATCAAGTAGTAAC+TGG + Chr3:102136372-102136391 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + Chr3:102136235-102136254 None:intergenic 25.0%
! GATTGTTTCAAACATAAGTA+AGG - Chr3:102132776-102132795 MsG0380017913.01.T01:intron 25.0%
! GTTAGAAACAAAAGAAATTG+GGG + Chr3:102136543-102136562 None:intergenic 25.0%
! TACTCTAGTAAGAATATTTG+GGG + Chr3:102133092-102133111 None:intergenic 25.0%
! TAGGTATTAATGTTACTAGT+TGG - Chr3:102131180-102131199 MsG0380017913.01.T01:intron 25.0%
! TATCAGTTGAGTTAAACTTA+TGG - Chr3:102132624-102132643 MsG0380017913.01.T01:CDS 25.0%
! TATTATAAAGTATGGTGACA+AGG - Chr3:102137063-102137082 MsG0380017913.01.T01:five_prime_UTR 25.0%
! TTATGGTACTTAATGGAATT+AGG - Chr3:102131161-102131180 MsG0380017913.01.T01:intron 25.0%
! TTCATTTGATGTATTGAATG+TGG - Chr3:102137126-102137145 MsG0380017913.01.T01:five_prime_UTR 25.0%
! TTCCAGTTGAAGAATTTATA+AGG + Chr3:102130470-102130489 None:intergenic 25.0%
! TTTACTCTCTTCAATTCAAT+CGG + Chr3:102131302-102131321 None:intergenic 25.0%
! TTTCAAACATAAGTAAGGAA+TGG - Chr3:102132781-102132800 MsG0380017913.01.T01:intron 25.0%
!! AGGAATTTACAAAAGTTGAT+AGG + Chr3:102134015-102134034 None:intergenic 25.0%
!! ATCAATTACTTGAACTTTTG+TGG - Chr3:102134277-102134296 MsG0380017913.01.T01:intron 25.0%
!! CAAAATTGCACATTTTCAAA+TGG + Chr3:102131630-102131649 None:intergenic 25.0%
!! CTTATGTTTGAAACAATCTA+CGG + Chr3:102132774-102132793 None:intergenic 25.0%
!! TAACCTTTTACTATTTTCGT+TGG - Chr3:102131412-102131431 MsG0380017913.01.T01:CDS 25.0%
!! TATCATTTTGTTCGATATAG+AGG + Chr3:102134240-102134259 None:intergenic 25.0%
!! TTGAAATAGGTCAGTTATTT+TGG + Chr3:102136147-102136166 None:intergenic 25.0%
!!! GGCAAGAAGTTTTTTTTTTT+TGG + Chr3:102133994-102134013 None:intergenic 25.0%
!!! GGCACTTTTTTTTAGAAAAT+GGG + Chr3:102136124-102136143 None:intergenic 25.0%
!!! GTTTTGAATTCGAAAGTTAA+GGG + Chr3:102134760-102134779 None:intergenic 25.0%
!!! GTTTTTTTTTTTCTGAGAGA+AGG + Chr3:102134035-102134054 None:intergenic 25.0%
!!! TGAAATAGGTCAGTTATTTT+GGG + Chr3:102136146-102136165 None:intergenic 25.0%
AAAATGAAAGAAAGATGTGG+TGG + Chr3:102132891-102132910 None:intergenic 30.0%
AAATACGGTCAAAGTAAGTT+AGG + Chr3:102131654-102131673 None:intergenic 30.0%
AAATGAAAGAAAGATGTGGT+GGG + Chr3:102132890-102132909 None:intergenic 30.0%
AACACTTACGCTTTACATTA+TGG - Chr3:102131380-102131399 MsG0380017913.01.T01:CDS 30.0%
AACTTTCAATGTAATACAGC+GGG - Chr3:102133313-102133332 MsG0380017913.01.T01:intron 30.0%
AAGCTATGATCCATAATTTC+AGG - Chr3:102135371-102135390 MsG0380017913.01.T01:CDS 30.0%
AATGGTCAAAATTTGATTGG+CGG - Chr3:102133119-102133138 MsG0380017913.01.T01:intron 30.0%
ACGTTGAATGATAATCCATT+AGG + Chr3:102134583-102134602 None:intergenic 30.0%
ACTCTAGTAAGAATATTTGG+GGG + Chr3:102133091-102133110 None:intergenic 30.0%
ATATGACTCTAGCTAAATAG+TGG - Chr3:102131003-102131022 MsG0380017913.01.T01:intron 30.0%
ATTAATGTTACTAGTTGGGA+GGG - Chr3:102131185-102131204 MsG0380017913.01.T01:intron 30.0%
ATTTAATTGAATGAAACCGC+AGG - Chr3:102131991-102132010 MsG0380017913.01.T01:CDS 30.0%
ATTTCAATGTGTAGTATGGA+TGG - Chr3:102135985-102136004 MsG0380017913.01.T01:intron 30.0%
CACATGATTATGGTACTTAA+TGG - Chr3:102131154-102131173 MsG0380017913.01.T01:intron 30.0%
CACATTTAAATGTGAAGAAG+TGG - Chr3:102132556-102132575 MsG0380017913.01.T01:CDS 30.0%
CACTTATATACTTCAAGTGA+AGG - Chr3:102132094-102132113 MsG0380017913.01.T01:intron 30.0%
CATTTAAATGTGAAGAAGTG+GGG - Chr3:102132558-102132577 MsG0380017913.01.T01:CDS 30.0%
GAACTTTCAATGTAATACAG+CGG - Chr3:102133312-102133331 MsG0380017913.01.T01:intron 30.0%
GATCTGACTACGTATTTAAT+TGG - Chr3:102133237-102133256 MsG0380017913.01.T01:intron 30.0%
TAAAGAGTAGGAATCGAATT+CGG + Chr3:102135267-102135286 None:intergenic 30.0%
TAACAAGAAAGCAACCATTA+TGG - Chr3:102131232-102131251 MsG0380017913.01.T01:intron 30.0%
TAACAGAAAGAAGACTAGAA+AGG + Chr3:102136511-102136530 None:intergenic 30.0%
TACAACAAAGACAATCATTC+TGG - Chr3:102135459-102135478 MsG0380017913.01.T01:intron 30.0%
TAGTCTTCTTTCTGTTATGT+GGG - Chr3:102136514-102136533 MsG0380017913.01.T01:intron 30.0%
TATTAATGTTACTAGTTGGG+AGG - Chr3:102131184-102131203 MsG0380017913.01.T01:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG + Chr3:102136250-102136269 None:intergenic 30.0%
TTACAGGGTATATTGATCAA+TGG - Chr3:102130654-102130673 MsG0380017913.01.T01:CDS 30.0%
TTATCATTCAACGTTGAACA+AGG - Chr3:102134589-102134608 MsG0380017913.01.T01:intron 30.0%
TTGTATTTATGAGACCGTAA+TGG + Chr3:102135444-102135463 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG - Chr3:102136298-102136317 MsG0380017913.01.T01:intron 30.0%
TTTAAACGAGACAGTTTCTA+TGG - Chr3:102133862-102133881 MsG0380017913.01.T01:intron 30.0%
TTTGTAACAGAATGAATGTC+TGG + Chr3:102130693-102130712 None:intergenic 30.0%
! AGTATTGAATCTGTAACGTT+TGG - Chr3:102133424-102133443 MsG0380017913.01.T01:intron 30.0%
! TAAAGGTATATCCCTATTCA+TGG - Chr3:102136591-102136610 MsG0380017913.01.T01:intron 30.0%
! TAAGGTTAGTCCTGAAATTA+TGG + Chr3:102135384-102135403 None:intergenic 30.0%
! TTCAACTGGAATGTTACTTA+CGG - Chr3:102130479-102130498 MsG0380017913.01.T01:three_prime_UTR 30.0%
!! AAAGAGACTTTTAAAAGAGG+TGG + Chr3:102130241-102130260 None:intergenic 30.0%
!! AAGAGACTTTTAAAAGAGGT+GGG + Chr3:102130240-102130259 None:intergenic 30.0%
!! ATTAGTGTTGACACACTTAA+GGG - Chr3:102130902-102130921 MsG0380017913.01.T01:intron 30.0%
!! GAAAAAAGAGTACTAGAAAC+TGG - Chr3:102133030-102133049 MsG0380017913.01.T01:intron 30.0%
!! GAAATAGGTCAGTTATTTTG+GGG + Chr3:102136145-102136164 None:intergenic 30.0%
!! GAGAAAGAGACTTTTAAAAG+AGG + Chr3:102130244-102130263 None:intergenic 30.0%
!! GTTTTGTTAGTTAAGTGTGT+GGG - Chr3:102130357-102130376 MsG0380017913.01.T01:three_prime_UTR 30.0%
!! TAAACTCTGCTTTTACGTAT+AGG + Chr3:102136438-102136457 None:intergenic 30.0%
!! TGTTGAAGACATTGATAATG+AGG + Chr3:102130722-102130741 None:intergenic 30.0%
!!! AGTTTTGTTAGTTAAGTGTG+TGG - Chr3:102130356-102130375 MsG0380017913.01.T01:three_prime_UTR 30.0%
!!! ATATAGTATTCTTTTTCGGC+TGG + Chr3:102137007-102137026 None:intergenic 30.0%
!!! GGGCACTTTTTTTTAGAAAA+TGG + Chr3:102136125-102136144 None:intergenic 30.0%
!!! GGTTTTGAATTCGAAAGTTA+AGG + Chr3:102134761-102134780 None:intergenic 30.0%
!!! TATAGTATTCTTTTTCGGCT+GGG + Chr3:102137006-102137025 None:intergenic 30.0%
AAAAACAAGTGAACCAGATC+TGG + Chr3:102131083-102131102 None:intergenic 35.0%
AAGCATCACATGAAAACTCA+CGG + Chr3:102133909-102133928 None:intergenic 35.0%
AAGTGAAATACCTGATTGAG+CGG + Chr3:102135049-102135068 None:intergenic 35.0%
AATCTTAGAGGAGAATCTTG+TGG + Chr3:102134922-102134941 None:intergenic 35.0%
ACTGAACCGTTTAAGAAATG+TGG - Chr3:102131968-102131987 MsG0380017913.01.T01:CDS 35.0%
ACTTGTACCAATCACCAATA+AGG + Chr3:102132253-102132272 None:intergenic 35.0%
ACTTTCAATGTAATACAGCG+GGG - Chr3:102133314-102133333 MsG0380017913.01.T01:intron 35.0%
AGAAAATGGGTCAGTTATTC+CGG + Chr3:102136111-102136130 None:intergenic 35.0%
AGACAGTTTCTATGGTTATC+CGG - Chr3:102133870-102133889 MsG0380017913.01.T01:intron 35.0%
AGACTTAGGATATCAAACGT+GGG - Chr3:102134723-102134742 MsG0380017913.01.T01:intron 35.0%
ATAAATAGCCGTCCATGAAT+AGG + Chr3:102136606-102136625 None:intergenic 35.0%
ATGAACTACGCGTTCAATAT+TGG - Chr3:102132944-102132963 MsG0380017913.01.T01:intron 35.0%
ATGTTTGTTTGATGCTGATG+TGG - Chr3:102130926-102130945 MsG0380017913.01.T01:intron 35.0%
ATTCCGACAATATGCCATAA+TGG + Chr3:102131249-102131268 None:intergenic 35.0%
ATTGAAAGCCCATCTTGATA+AGG - Chr3:102134510-102134529 MsG0380017913.01.T01:intron 35.0%
ATTGTATCATACCGTATGGT+TGG + Chr3:102132276-102132295 None:intergenic 35.0%
ATTTATGAGACCGTAATGGT+AGG + Chr3:102135440-102135459 None:intergenic 35.0%
CAACCATTATGGCATATTGT+CGG - Chr3:102131243-102131262 MsG0380017913.01.T01:intron 35.0%
CAGCCAACGAAAATAGTAAA+AGG + Chr3:102131418-102131437 None:intergenic 35.0%
CAGGAAAGACTTATAGACTT+AGG - Chr3:102134709-102134728 MsG0380017913.01.T01:intron 35.0%
CATATCTACAATTGCCCTTT+GGG + Chr3:102131934-102131953 None:intergenic 35.0%
CTTCAAGTGAAGGATCAAAT+TGG - Chr3:102132104-102132123 MsG0380017913.01.T01:intron 35.0%
CTTCTTTCCCTTATCAAGAT+GGG + Chr3:102134521-102134540 None:intergenic 35.0%
GCTGATTACTTCAAAATCTC+CGG - Chr3:102135568-102135587 MsG0380017913.01.T01:intron 35.0%
GTTAATGGCAAGCAAAGATA+TGG - Chr3:102135499-102135518 MsG0380017913.01.T01:intron 35.0%
GTTGGTCGTTATGTAATGTA+AGG - Chr3:102131344-102131363 MsG0380017913.01.T01:intron 35.0%
TAAACCTTTGCTAGCTCAAA+GGG + Chr3:102136804-102136823 None:intergenic 35.0%
TAAATAGCCGTCCATGAATA+GGG + Chr3:102136605-102136624 None:intergenic 35.0%
TAATATGATTCTCACCTGAG+TGG + Chr3:102136073-102136092 None:intergenic 35.0%
TAGACTTAGGATATCAAACG+TGG - Chr3:102134722-102134741 MsG0380017913.01.T01:intron 35.0%
TATCACCATTTGTACACAAC+AGG - Chr3:102134690-102134709 MsG0380017913.01.T01:intron 35.0%
TCAAAACCACAAACTGAAGT+TGG - Chr3:102134773-102134792 MsG0380017913.01.T01:intron 35.0%
TCCTTACAGATTACAGAACT+GGG + Chr3:102134458-102134477 None:intergenic 35.0%
TCTTTCCTGTTGTGTACAAA+TGG + Chr3:102134698-102134717 None:intergenic 35.0%
TTAAACCTTTGCTAGCTCAA+AGG + Chr3:102136805-102136824 None:intergenic 35.0%
TTCAAATGGGTCATCTATTG+CGG + Chr3:102131616-102131635 None:intergenic 35.0%
TTCAATTCAATCGGTACCTT+AGG + Chr3:102131293-102131312 None:intergenic 35.0%
TTCCTTACAGATTACAGAAC+TGG + Chr3:102134459-102134478 None:intergenic 35.0%
TTGAAAGCCCATCTTGATAA+GGG - Chr3:102134511-102134530 MsG0380017913.01.T01:intron 35.0%
TTGTACCATGAGATGAGAAA+GGG + Chr3:102130756-102130775 None:intergenic 35.0%
! AAGAACTACTCGACTTTTTG+TGG - Chr3:102132834-102132853 MsG0380017913.01.T01:CDS 35.0%
! AGAGCAAAAGCACATGATTA+TGG - Chr3:102131144-102131163 MsG0380017913.01.T01:intron 35.0%
! CTAGTCTTCTTTCTGTTATG+TGG - Chr3:102136513-102136532 MsG0380017913.01.T01:intron 35.0%
! CTTTTACGTATAGGATAGCT+AGG + Chr3:102136429-102136448 None:intergenic 35.0%
! GAACAATGTTCTCGTTGTTT+TGG + Chr3:102135699-102135718 None:intergenic 35.0%
! TTTTTGTTACTGAGCCCAAA+GGG - Chr3:102131917-102131936 MsG0380017913.01.T01:CDS 35.0%
!! AACTTTAAAACACATGCACC+CGG + Chr3:102133714-102133733 None:intergenic 35.0%
!! AGAGACTTTTAAAAGAGGTG+GGG + Chr3:102130239-102130258 None:intergenic 35.0%
!! GATTAGTGTTGACACACTTA+AGG - Chr3:102130901-102130920 MsG0380017913.01.T01:intron 35.0%
!! GCTACTCTTTCTTTGTTGTT+GGG - Chr3:102135737-102135756 MsG0380017913.01.T01:intron 35.0%
!! GTGCTTTTGCTCTTTTAGAA+AGG + Chr3:102131137-102131156 None:intergenic 35.0%
!!! ATTTTGAGTTGTGTGCCAAA+GGG - Chr3:102133194-102133213 MsG0380017913.01.T01:intron 35.0%
!!! TTTTTTGTTACTGAGCCCAA+AGG - Chr3:102131916-102131935 MsG0380017913.01.T01:CDS 35.0%
AAACCTTTGCTAGCTCAAAG+GGG + Chr3:102136803-102136822 None:intergenic 40.0%
AAATGTGTGGACACTAGACA+CGG - Chr3:102131055-102131074 MsG0380017913.01.T01:intron 40.0%
AAGAAGCTTCCTATACCTGA+TGG - Chr3:102134535-102134554 MsG0380017913.01.T01:intron 40.0%
AAGTAATCAGCGAGCTTAAG+AGG + Chr3:102135559-102135578 None:intergenic 40.0%
ACAATGTAGTAGTCCTGAGA+AGG + Chr3:102134894-102134913 None:intergenic 40.0%
ACACATTTGATCCAGCACAT+GGG + Chr3:102131043-102131062 None:intergenic 40.0%
ACTCTCAATTTAGCTGCTGT+TGG - Chr3:102130389-102130408 MsG0380017913.01.T01:three_prime_UTR 40.0%
AGAAGGAACTCATTCGAAGA+TGG - Chr3:102132029-102132048 MsG0380017913.01.T01:CDS 40.0%
AGTAGCAACACATAGAAGCA+AGG + Chr3:102130417-102130436 None:intergenic 40.0%
AGTGAAATACCTGATTGAGC+GGG + Chr3:102135048-102135067 None:intergenic 40.0%
ATATAAGTGAAGTTCCTCCC+TGG + Chr3:102132083-102132102 None:intergenic 40.0%
ATGAACCCTTTCTCATCTCA+TGG - Chr3:102130748-102130767 MsG0380017913.01.T01:CDS 40.0%
ATTAGGACTCCATCAGGTAT+AGG + Chr3:102134547-102134566 None:intergenic 40.0%
ATTGAATGAAACCGCAGGAA+TGG - Chr3:102131996-102132015 MsG0380017913.01.T01:CDS 40.0%
CCAAAGGGCAATTGTAGATA+TGG - Chr3:102131932-102131951 MsG0380017913.01.T01:CDS 40.0%
CCAACTACAACAACTACTTC+TGG + Chr3:102131329-102131348 None:intergenic 40.0%
CCAGAAGTAGTTGTTGTAGT+TGG - Chr3:102131326-102131345 MsG0380017913.01.T01:intron 40.0%
CCATATCTACAATTGCCCTT+TGG + Chr3:102131935-102131954 None:intergenic 40.0%
CTCATTCGAAGATGGTGTTT+CGG - Chr3:102132037-102132056 MsG0380017913.01.T01:intron 40.0%
CTTCTACCAACTTCAGTTTG+TGG + Chr3:102134782-102134801 None:intergenic 40.0%
CTTGTACCATGAGATGAGAA+AGG + Chr3:102130757-102130776 None:intergenic 40.0%
CTTTGGCACACAACTCAAAA+TGG + Chr3:102133195-102133214 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + Chr3:102136110-102136129 None:intergenic 40.0%
GACAGTTTCTATGGTTATCC+GGG - Chr3:102133871-102133890 MsG0380017913.01.T01:intron 40.0%
GACCAATCAACTTGGATTGT+AGG + Chr3:102135014-102135033 None:intergenic 40.0%
GAGTAGGTGGTAAGCTATAA+TGG + Chr3:102131456-102131475 None:intergenic 40.0%
GCTTCTTTCCCTTATCAAGA+TGG + Chr3:102134522-102134541 None:intergenic 40.0%
GGAGATTACACTGTCCTTAT+TGG - Chr3:102132236-102132255 MsG0380017913.01.T01:intron 40.0%
GGCATATTGTCGGAATTATG+TGG - Chr3:102131253-102131272 MsG0380017913.01.T01:intron 40.0%
GGTAGAAGAAACTACTCCTA+AGG - Chr3:102131274-102131293 MsG0380017913.01.T01:intron 40.0%
GGTATATCCCTATTCATGGA+CGG - Chr3:102136595-102136614 MsG0380017913.01.T01:intron 40.0%
GGTTCAAAGACCAATCAACT+TGG + Chr3:102135022-102135041 None:intergenic 40.0%
GTTCAGAGCTATCATCTTGA+TGG - Chr3:102135715-102135734 MsG0380017913.01.T01:intron 40.0%
TACGTATAGGATAGCTAGGT+AGG + Chr3:102136425-102136444 None:intergenic 40.0%
TATAGGATAGCTAGGTAGGT+AGG + Chr3:102136421-102136440 None:intergenic 40.0%
TATGTTGCACTTGACAACGT+TGG - Chr3:102136623-102136642 MsG0380017913.01.T01:intron 40.0%
TCAAATGGGTCATCTATTGC+GGG + Chr3:102131615-102131634 None:intergenic 40.0%
TCAATGTGTAGTATGGATGG+AGG - Chr3:102135988-102136007 MsG0380017913.01.T01:intron 40.0%
TCACAGATGTGTCAAGGTAA+AGG + Chr3:102135639-102135658 None:intergenic 40.0%
TCACGGACAAAATTTGAACC+CGG + Chr3:102133892-102133911 None:intergenic 40.0%
TCATTCGAAGATGGTGTTTC+GGG - Chr3:102132038-102132057 MsG0380017913.01.T01:intron 40.0%
TCCCAGTTCTGTAATCTGTA+AGG - Chr3:102134454-102134473 MsG0380017913.01.T01:intron 40.0%
TCCTCACTTGATGTTCATGT+GGG - Chr3:102134834-102134853 MsG0380017913.01.T01:intron 40.0%
TGGACAACTTCTAGCAGAAA+CGG - Chr3:102136015-102136034 MsG0380017913.01.T01:intron 40.0%
TGTCAATTAAATTGGGACGG+AGG - Chr3:102136301-102136320 MsG0380017913.01.T01:intron 40.0%
TGTTTGATGCTGATGTGGAT+TGG - Chr3:102130931-102130950 MsG0380017913.01.T01:intron 40.0%
TTCTCAGGACTACTACATTG+TGG - Chr3:102134893-102134912 MsG0380017913.01.T01:intron 40.0%
TTGAATGAAACCGCAGGAAT+GGG - Chr3:102131997-102132016 MsG0380017913.01.T01:CDS 40.0%
TTGGTACAAGTCCAACCATA+CGG - Chr3:102132262-102132281 MsG0380017913.01.T01:intron 40.0%
TTTGCTGGCAAATTACGAAG+TGG - Chr3:102133053-102133072 MsG0380017913.01.T01:intron 40.0%
! AAAAGTGGCGCATGTGATTT+TGG + Chr3:102131492-102131511 None:intergenic 40.0%
! ACACTGTCCTTATTGGTGAT+TGG - Chr3:102132243-102132262 MsG0380017913.01.T01:intron 40.0%
! ACATATCCTTTTCACTTCCG+CGG - Chr3:102137183-102137202 MsG0380017913.01.T01:five_prime_UTR 40.0%
! GGCTACTCTTTCTTTGTTGT+TGG - Chr3:102135736-102135755 MsG0380017913.01.T01:intron 40.0%
! TGATTTTGGACAAACCGAGA+TGG + Chr3:102131478-102131497 None:intergenic 40.0%
!! AGACGTGCATTCTTTGGAAT+AGG + Chr3:102136749-102136768 None:intergenic 40.0%
!! AGTACTAGAAACTGGTTTGC+TGG - Chr3:102133038-102133057 MsG0380017913.01.T01:intron 40.0%
!! CAAACTGAAGTTGGTAGAAG+TGG - Chr3:102134782-102134801 MsG0380017913.01.T01:intron 40.0%
!! GACCTACAATCCAAGTTGAT+TGG - Chr3:102135009-102135028 MsG0380017913.01.T01:intron 40.0%
!! GAGACTTTTAAAAGAGGTGG+GGG + Chr3:102130238-102130257 None:intergenic 40.0%
!! GCTTTCTGAAATGCTAGAGA+TGG + Chr3:102132146-102132165 None:intergenic 40.0%
!!! CATTTTGAGTTGTGTGCCAA+AGG - Chr3:102133193-102133212 MsG0380017913.01.T01:intron 40.0%
AAAACTCTTGCCTCTCTACG+CGG + Chr3:102130342-102130361 None:intergenic 45.0%
AACCTTTGCTAGCTCAAAGG+GGG + Chr3:102136802-102136821 None:intergenic 45.0%
AACTGCTGATCAACCTTCTC+AGG - Chr3:102134878-102134897 MsG0380017913.01.T01:intron 45.0%
ACAGAATGAATGTCTGGACC+AGG + Chr3:102130687-102130706 None:intergenic 45.0%
ACGTTGGAATGTGGAACTTG+AGG - Chr3:102136639-102136658 MsG0380017913.01.T01:intron 45.0%
AGAATGCACGTCTTTGTGGT+AGG - Chr3:102136756-102136775 MsG0380017913.01.T01:CDS 45.0%
AGGAAACTCGTCTCTGATTG+AGG + Chr3:102136729-102136748 None:intergenic 45.0%
AGGACTAACCTTACAGCAAG+TGG - Chr3:102135391-102135410 MsG0380017913.01.T01:CDS 45.0%
AGGTCTTTCAGACTCAAACG+TGG + Chr3:102136962-102136981 None:intergenic 45.0%
ATACTGTCGTGCCCAAAACT+CGG + Chr3:102136666-102136685 None:intergenic 45.0%
ATCAATGGTCGTGGACCTAA+TGG - Chr3:102134565-102134584 MsG0380017913.01.T01:intron 45.0%
ATCGACTACTCCTTAACCAC+GGG - Chr3:102135185-102135204 MsG0380017913.01.T01:CDS 45.0%
ATGCCTTCTCAAGCATGGAA+TGG + Chr3:102136834-102136853 None:intergenic 45.0%
ATTATATACTCCCTCCGTCC+CGG - Chr3:102136089-102136108 MsG0380017913.01.T01:intron 45.0%
CACACATTTGATCCAGCACA+TGG + Chr3:102131044-102131063 None:intergenic 45.0%
CACTTGACAACGTTGGAATG+TGG - Chr3:102136630-102136649 MsG0380017913.01.T01:intron 45.0%
CAGAAATGATTAGGGAGGTG+CGG + Chr3:102130209-102130228 None:intergenic 45.0%
CAGAATGAATGTCTGGACCA+GGG + Chr3:102130686-102130705 None:intergenic 45.0%
CATCCATTCCATGCTTGAGA+AGG - Chr3:102136828-102136847 MsG0380017913.01.T01:intron 45.0%
CATGTGCTGGATCAAATGTG+TGG - Chr3:102131042-102131061 MsG0380017913.01.T01:intron 45.0%
CCAAAGAATGCACGTCTTTG+TGG - Chr3:102136752-102136771 MsG0380017913.01.T01:CDS 45.0%
CCACAAAGACGTGCATTCTT+TGG + Chr3:102136755-102136774 None:intergenic 45.0%
CCACAAGGATCCTACCATTA+CGG - Chr3:102135427-102135446 MsG0380017913.01.T01:intron 45.0%
CCTGATGGAGTCCTAATCAA+TGG - Chr3:102134550-102134569 MsG0380017913.01.T01:intron 45.0%
CGTAATGGTAGGATCCTTGT+GGG + Chr3:102135429-102135448 None:intergenic 45.0%
CTAGAATGCCTTCTCAAGCA+TGG + Chr3:102136839-102136858 None:intergenic 45.0%
CTAGCATTTCAGAAAGCAGC+TGG - Chr3:102132149-102132168 MsG0380017913.01.T01:intron 45.0%
CTCCTCACTTGATGTTCATG+TGG - Chr3:102134833-102134852 MsG0380017913.01.T01:intron 45.0%
CTCTTAAGCAAGTTGCCAAG+CGG - Chr3:102133260-102133279 MsG0380017913.01.T01:intron 45.0%
CTTGCATCACAGATGTGTCA+AGG + Chr3:102135645-102135664 None:intergenic 45.0%
GAATGCACGTCTTTGTGGTA+GGG - Chr3:102136757-102136776 MsG0380017913.01.T01:CDS 45.0%
GAGACACGATATCAGCAACA+TGG + Chr3:102135928-102135947 None:intergenic 45.0%
GATCGACTACTCCTTAACCA+CGG - Chr3:102135184-102135203 MsG0380017913.01.T01:CDS 45.0%
GCTGTTACAAAAAGACACCG+CGG + Chr3:102137203-102137222 None:intergenic 45.0%
GGACAACTTCTAGCAGAAAC+GGG - Chr3:102136016-102136035 MsG0380017913.01.T01:intron 45.0%
GGAGGGGTCAGAAATGATTA+GGG + Chr3:102130217-102130236 None:intergenic 45.0%
GGGAAAGGAACTGGAATTCT+AGG + Chr3:102132206-102132225 None:intergenic 45.0%
GTAGTCAGATCGGATAGAAG+AGG + Chr3:102133228-102133247 None:intergenic 45.0%
GTGACAAGGATTGCAGAAGT+TGG - Chr3:102137077-102137096 MsG0380017913.01.T01:five_prime_UTR 45.0%
TAAGATTCTCACCACCACTG+CGG - Chr3:102134935-102134954 MsG0380017913.01.T01:intron 45.0%
TACGGTGACATTTACCCACT+TGG - Chr3:102130497-102130516 MsG0380017913.01.T01:three_prime_UTR 45.0%
TATACTCCCTCAGTGTCCAT+GGG + Chr3:102134164-102134183 None:intergenic 45.0%
TCAGATCGGATAGAAGAGGA+GGG + Chr3:102133224-102133243 None:intergenic 45.0%
TCCCACATGAACATCAAGTG+AGG + Chr3:102134838-102134857 None:intergenic 45.0%
TCTAATGAGTGATCACCGCT+TGG + Chr3:102133278-102133297 None:intergenic 45.0%
TCTTTCAGACTCAAACGTGG+TGG + Chr3:102136959-102136978 None:intergenic 45.0%
TTATACTCCCTCAGTGTCCA+TGG + Chr3:102134165-102134184 None:intergenic 45.0%
TTGATCAATGGCCAATTCCC+TGG - Chr3:102130666-102130685 MsG0380017913.01.T01:CDS 45.0%
! AAAGAAAGATGTGGTGGGAG+TGG + Chr3:102132885-102132904 None:intergenic 45.0%
! AACATCAAGTGAGGAGTACG+TGG + Chr3:102134829-102134848 None:intergenic 45.0%
! AAGAAAGATGTGGTGGGAGT+GGG + Chr3:102132884-102132903 None:intergenic 45.0%
! AGTGGTGGTGAGAATCTTAG+AGG + Chr3:102134934-102134953 None:intergenic 45.0%
! CCATTGATTAGGACTCCATC+AGG + Chr3:102134553-102134572 None:intergenic 45.0%
! GAACTTGAGGACCGAGTTTT+GGG - Chr3:102136652-102136671 MsG0380017913.01.T01:intron 45.0%
! GAGGCATTAGGATACTCAGT+AGG - Chr3:102132180-102132199 MsG0380017913.01.T01:intron 45.0%
! TAGGTCCACGACCATTGATT+AGG + Chr3:102134564-102134583 None:intergenic 45.0%
! TGTAATCTCCAGCTGGTTCA+GGG + Chr3:102132226-102132245 None:intergenic 45.0%
! TTTTGGGCACGACAGTATCT+TGG - Chr3:102136668-102136687 MsG0380017913.01.T01:intron 45.0%
!! ACTTTTAAAAGAGGTGGGGG+AGG + Chr3:102130235-102130254 None:intergenic 45.0%
!! CTGAAGTTGGTAGAAGTGGA+AGG - Chr3:102134786-102134805 MsG0380017913.01.T01:intron 45.0%
!! CTTTTAAAAGAGGTGGGGGA+GGG + Chr3:102130234-102130253 None:intergenic 45.0%
!! TTTTAAAAGAGGTGGGGGAG+GGG + Chr3:102130233-102130252 None:intergenic 45.0%
!! AAAAATTACAATAAAAAAAA+TGG - Chr3:102132483-102132502 MsG0380017913.01.T01:CDS 5.0%
!! AAATTAACTTATAAAAATAT+GGG - Chr3:102133573-102133592 MsG0380017913.01.T01:intron 5.0%
!! TAAATTAACTTATAAAAATA+TGG - Chr3:102133572-102133591 MsG0380017913.01.T01:intron 5.0%
!!! AGTTTTTTTTTTTTTATATA+AGG + Chr3:102134069-102134088 None:intergenic 5.0%
!!! TAATTAATATTTTATTTTTC+TGG - Chr3:102133490-102133509 MsG0380017913.01.T01:intron 5.0%
!!! TTATTTATTTAATTTTTACA+GGG - Chr3:102130639-102130658 MsG0380017913.01.T01:CDS 5.0%
!!! TTTATTTATTTAATTTTTAC+AGG - Chr3:102130638-102130657 MsG0380017913.01.T01:CDS 5.0%
AAGAATGTGACCTCGAGCTG+AGG + Chr3:102136982-102137001 None:intergenic 50.0%
AAGACACCGCGGAAGTGAAA+AGG + Chr3:102137192-102137211 None:intergenic 50.0%
AAGTGAAGTTCCTCCCTGGT+GGG + Chr3:102132079-102132098 None:intergenic 50.0%
ACAAACCGAGATGGAGTAGG+TGG + Chr3:102131469-102131488 None:intergenic 50.0%
ACCCACTTGGAGTTCGTCAA+AGG - Chr3:102130510-102130529 MsG0380017913.01.T01:three_prime_UTR 50.0%
ACCCTTTGACGAACTCCAAG+TGG + Chr3:102130515-102130534 None:intergenic 50.0%
ACCTTACAGCAAGTGGACCA+AGG - Chr3:102135398-102135417 MsG0380017913.01.T01:CDS 50.0%
ACTAGACACGGATCCAGATC+TGG - Chr3:102131067-102131086 MsG0380017913.01.T01:intron 50.0%
ACTTGGATTGTAGGTCCACC+AGG + Chr3:102135005-102135024 None:intergenic 50.0%
AGCATATCTGAGAGACCCAC+TGG - Chr3:102135607-102135626 MsG0380017913.01.T01:intron 50.0%
AGCTCTCCTGGTCAGGTTAA+TGG - Chr3:102135484-102135503 MsG0380017913.01.T01:intron 50.0%
AGGACAGTGTAATCTCCAGC+TGG + Chr3:102132233-102132252 None:intergenic 50.0%
ATACTCCCTCAGTGTCCATG+GGG + Chr3:102134163-102134182 None:intergenic 50.0%
ATATCTGAGAGACCCACTGG+TGG - Chr3:102135610-102135629 MsG0380017913.01.T01:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + Chr3:102136106-102136125 None:intergenic 50.0%
ATGGGTCATCTATTGCGGGA+CGG + Chr3:102131611-102131630 None:intergenic 50.0%
CACTAAAGTCTCCCATGTGC+TGG - Chr3:102131029-102131048 MsG0380017913.01.T01:intron 50.0%
CCCACTTGGAGTTCGTCAAA+GGG - Chr3:102130511-102130530 MsG0380017913.01.T01:three_prime_UTR 50.0%
CCCTTTGACGAACTCCAAGT+GGG + Chr3:102130514-102130533 None:intergenic 50.0%
CCGTAATGGTAGGATCCTTG+TGG + Chr3:102135430-102135449 None:intergenic 50.0%
CGAATGAGTTCCTTCTCTGC+TGG + Chr3:102132025-102132044 None:intergenic 50.0%
CTTCGCTATAGCAACTCTGC+AGG - Chr3:102134960-102134979 MsG0380017913.01.T01:intron 50.0%
CTTGGATTGTAGGTCCACCA+GGG + Chr3:102135004-102135023 None:intergenic 50.0%
GAAGAGGAGGGTTATCCCTT+TGG + Chr3:102133212-102133231 None:intergenic 50.0%
GAATGTCTGGACCAGGGAAT+TGG + Chr3:102130680-102130699 None:intergenic 50.0%
GCATTTCAGAAAGCAGCTGG+CGG - Chr3:102132152-102132171 MsG0380017913.01.T01:intron 50.0%
GCTTACCACCTACTCCATCT+CGG - Chr3:102131461-102131480 MsG0380017913.01.T01:intron 50.0%
GCTTCCAACGCGAAAAACAC+CGG + Chr3:102135590-102135609 None:intergenic 50.0%
GGAGTCCTAATCAATGGTCG+TGG - Chr3:102134556-102134575 MsG0380017913.01.T01:intron 50.0%
GGGAGGGGTCAGAAATGATT+AGG + Chr3:102130218-102130237 None:intergenic 50.0%
GGGGTCAGAAATGATTAGGG+AGG + Chr3:102130214-102130233 None:intergenic 50.0%
GTAGTATGGATGGAGGACAG+TGG - Chr3:102135995-102136014 MsG0380017913.01.T01:intron 50.0%
GTCAGATCGGATAGAAGAGG+AGG + Chr3:102133225-102133244 None:intergenic 50.0%
GTCTTTGTGGTAGGGCAAGT+GGG - Chr3:102136765-102136784 MsG0380017913.01.T01:CDS 50.0%
GTGGTCGTTCTTGATACGAC+AGG + Chr3:102136940-102136959 None:intergenic 50.0%
TAAGTGAAGTTCCTCCCTGG+TGG + Chr3:102132080-102132099 None:intergenic 50.0%
TCGACTACTCCTTAACCACG+GGG - Chr3:102135186-102135205 MsG0380017913.01.T01:CDS 50.0%
TGCTTGCCATTAACCTGACC+AGG + Chr3:102135493-102135512 None:intergenic 50.0%
TGGACAAACCGAGATGGAGT+AGG + Chr3:102131472-102131491 None:intergenic 50.0%
TGGTAGGATCCTTGTGGGTT+AGG + Chr3:102135424-102135443 None:intergenic 50.0%
TTGGATTGTAGGTCCACCAG+GGG + Chr3:102135003-102135022 None:intergenic 50.0%
! AATACCTGATTGAGCGGGCT+TGG + Chr3:102135043-102135062 None:intergenic 50.0%
! AGAAAGATGTGGTGGGAGTG+GGG + Chr3:102132883-102132902 None:intergenic 50.0%
! ATCATTCTGGCTAGCTCTCC+TGG - Chr3:102135472-102135491 MsG0380017913.01.T01:intron 50.0%
! ATCTCCGGTGTTTTTCGCGT+TGG - Chr3:102135583-102135602 MsG0380017913.01.T01:intron 50.0%
! ATGTGAAGAAGTGGGGTGTC+TGG - Chr3:102132565-102132584 MsG0380017913.01.T01:CDS 50.0%
! GGAACTTGAGGACCGAGTTT+TGG - Chr3:102136651-102136670 MsG0380017913.01.T01:intron 50.0%
! GTGTAATCTCCAGCTGGTTC+AGG + Chr3:102132227-102132246 None:intergenic 50.0%
! TGTGAAGAAGTGGGGTGTCT+GGG - Chr3:102132566-102132585 MsG0380017913.01.T01:CDS 50.0%
!! TTCGTTGGCTGTTAGCTTGC+TGG - Chr3:102131427-102131446 MsG0380017913.01.T01:intron 50.0%
AACTCTGCAGGCGCAGTATC+AGG - Chr3:102134972-102134991 MsG0380017913.01.T01:intron 55.0%
AAGGTAAAGGCCACCACCAG+TGG + Chr3:102135626-102135645 None:intergenic 55.0%
AAGTTCCTCCCTGGTGGGAT+GGG + Chr3:102132074-102132093 None:intergenic 55.0%
AGGTAAAGGCCACCACCAGT+GGG + Chr3:102135625-102135644 None:intergenic 55.0%
AGTAGCACGTTGCACCACTC+AGG - Chr3:102136056-102136075 MsG0380017913.01.T01:intron 55.0%
CGACTACTCCTTAACCACGG+GGG - Chr3:102135187-102135206 MsG0380017913.01.T01:CDS 55.0%
CGTCTTTGTGGTAGGGCAAG+TGG - Chr3:102136764-102136783 MsG0380017913.01.T01:CDS 55.0%
CTTTGCTAGCTCAAAGGGGG+CGG + Chr3:102136799-102136818 None:intergenic 55.0%
GGAATGGGATCCAGCAGAGA+AGG - Chr3:102132012-102132031 MsG0380017913.01.T01:CDS 55.0%
GTCAGTTATTCCGGGACGGA+GGG + Chr3:102136102-102136121 None:intergenic 55.0%
GTCATCTATTGCGGGACGGA+GGG + Chr3:102131607-102131626 None:intergenic 55.0%
GTCTGAAAGACCTCAGCTCG+AGG - Chr3:102136969-102136988 MsG0380017913.01.T01:CDS 55.0%
GTTCCTTTCCCTGAACCAGC+TGG - Chr3:102132215-102132234 MsG0380017913.01.T01:intron 55.0%
TCTGCTGGATCCCATTCCTG+CGG + Chr3:102132010-102132029 None:intergenic 55.0%
TGAACCAAGCCCGCTCAATC+AGG - Chr3:102135036-102135055 MsG0380017913.01.T01:intron 55.0%
TGGATTGTAGGTCCACCAGG+GGG + Chr3:102135002-102135021 None:intergenic 55.0%
TTTGCTAGCTCAAAGGGGGC+GGG + Chr3:102136798-102136817 None:intergenic 55.0%
! CAGAAAGCAGCTGGCGGTTT+TGG - Chr3:102132158-102132177 MsG0380017913.01.T01:intron 55.0%
! CGAGCTTAAGAGGCGTGTCT+GGG + Chr3:102135549-102135568 None:intergenic 55.0%
! GCTGGTTCAGGGAAAGGAAC+TGG + Chr3:102132215-102132234 None:intergenic 55.0%
! GTAAGCATTGCCGCGTAGAG+AGG - Chr3:102130329-102130348 MsG0380017913.01.T01:three_prime_UTR 55.0%
! TCTCCAGCTGGTTCAGGGAA+AGG + Chr3:102132221-102132240 None:intergenic 55.0%
!! AAAGCAGCTGGCGGTTTTGG+AGG - Chr3:102132161-102132180 MsG0380017913.01.T01:intron 55.0%
!! GATCCTTGTGGGTTAGGCCT+TGG + Chr3:102135418-102135437 None:intergenic 55.0%
!! GCCTTGGTCCACTTGCTGTA+AGG + Chr3:102135402-102135421 None:intergenic 55.0%
!!! CTGGCGGTTTTGGAGGCATT+AGG - Chr3:102132168-102132187 MsG0380017913.01.T01:intron 55.0%
ACAACATGCCCCATCCCACC+AGG - Chr3:102132062-102132081 MsG0380017913.01.T01:intron 60.0%
AGTTCCTCCCTGGTGGGATG+GGG + Chr3:102132073-102132092 None:intergenic 60.0%
ATTGTAGGTCCACCAGGGGG+TGG + Chr3:102134999-102135018 None:intergenic 60.0%
CAACATGCCCCATCCCACCA+GGG - Chr3:102132063-102132082 MsG0380017913.01.T01:intron 60.0%
CGCCCCCTTTGAGCTAGCAA+AGG - Chr3:102136797-102136816 MsG0380017913.01.T01:intron 60.0%
GAAGTTCCTCCCTGGTGGGA+TGG + Chr3:102132075-102132094 None:intergenic 60.0%
GCACTAGACCCCCGTGGTTA+AGG + Chr3:102135198-102135217 None:intergenic 60.0%
GGACCAAGGCCTAACCCACA+AGG - Chr3:102135412-102135431 MsG0380017913.01.T01:CDS 60.0%
GGTCAGTTATTCCGGGACGG+AGG + Chr3:102136103-102136122 None:intergenic 60.0%
GGTCATCTATTGCGGGACGG+AGG + Chr3:102131608-102131627 None:intergenic 60.0%
TCTGAGAGACCCACTGGTGG+TGG - Chr3:102135613-102135632 MsG0380017913.01.T01:intron 60.0%
TGCCACCCCATGGACACTGA+GGG - Chr3:102134155-102134174 MsG0380017913.01.T01:intron 60.0%
TTGTAGGTCCACCAGGGGGT+GGG + Chr3:102134998-102135017 None:intergenic 60.0%
! AGGGAGGTGCGGTGCAAGAA+GGG + Chr3:102130198-102130217 None:intergenic 60.0%
! GCGAGCTTAAGAGGCGTGTC+TGG + Chr3:102135550-102135569 None:intergenic 60.0%
! TAGGGAGGTGCGGTGCAAGA+AGG + Chr3:102130199-102130218 None:intergenic 60.0%
! TCTGGCTAGCTCTCCTGGTC+AGG - Chr3:102135477-102135496 MsG0380017913.01.T01:intron 60.0%
!! ATAGCGAAGCACCGCAGTGG+TGG + Chr3:102134949-102134968 None:intergenic 60.0%
!! GCTATAGCGAAGCACCGCAG+TGG + Chr3:102134952-102134971 None:intergenic 60.0%
CCACGGGGGTCTAGTGCAAG+TGG - Chr3:102135201-102135220 MsG0380017913.01.T01:CDS 65.0%
CCACTTGCACTAGACCCCCG+TGG + Chr3:102135204-102135223 None:intergenic 65.0%
CTACCTCTGCTGCCACCCCA+TGG - Chr3:102134145-102134164 MsG0380017913.01.T01:intron 65.0%
CTCCCTCAGTGTCCATGGGG+TGG + Chr3:102134160-102134179 None:intergenic 65.0%
CTGCCACCCCATGGACACTG+AGG - Chr3:102134154-102134173 MsG0380017913.01.T01:intron 65.0%
TGTCCATGGGGTGGCAGCAG+AGG + Chr3:102134151-102134170 None:intergenic 65.0%
CATGCCCCATCCCACCAGGG+AGG - Chr3:102132066-102132085 MsG0380017913.01.T01:intron 70.0%
GCAGTATCAGGCCCACCCCC+TGG - Chr3:102134984-102135003 MsG0380017913.01.T01:intron 70.0%
GTATCAGGCCCACCCCCTGG+TGG - Chr3:102134987-102135006 MsG0380017913.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 102130192 102137252 102130192 ID=MsG0380017913.01;Name=MsG0380017913.01
Chr3 mRNA 102130192 102137252 102130192 ID=MsG0380017913.01.T01;Parent=MsG0380017913.01;Name=MsG0380017913.01.T01;_AED=0.40;_eAED=0.40;_QI=194|1|1|1|1|1|8|444|544
Chr3 exon 102130192 102130848 102130192 ID=MsG0380017913.01.T01:exon:35938;Parent=MsG0380017913.01.T01
Chr3 exon 102131367 102131445 102131367 ID=MsG0380017913.01.T01:exon:35937;Parent=MsG0380017913.01.T01
Chr3 exon 102131686 102132051 102131686 ID=MsG0380017913.01.T01:exon:35936;Parent=MsG0380017913.01.T01
Chr3 exon 102132387 102132732 102132387 ID=MsG0380017913.01.T01:exon:35935;Parent=MsG0380017913.01.T01
Chr3 exon 102132834 102132936 102132834 ID=MsG0380017913.01.T01:exon:35934;Parent=MsG0380017913.01.T01
Chr3 exon 102135161 102135431 102135161 ID=MsG0380017913.01.T01:exon:35933;Parent=MsG0380017913.01.T01
Chr3 exon 102136675 102136784 102136675 ID=MsG0380017913.01.T01:exon:35932;Parent=MsG0380017913.01.T01
Chr3 exon 102136912 102137252 102136912 ID=MsG0380017913.01.T01:exon:35931;Parent=MsG0380017913.01.T01
Chr3 five_prime_UTR 102137059 102137252 102137059 ID=MsG0380017913.01.T01:five_prime_utr;Parent=MsG0380017913.01.T01
Chr3 CDS 102136912 102137058 102136912 ID=MsG0380017913.01.T01:cds;Parent=MsG0380017913.01.T01
Chr3 CDS 102136675 102136784 102136675 ID=MsG0380017913.01.T01:cds;Parent=MsG0380017913.01.T01
Chr3 CDS 102135161 102135431 102135161 ID=MsG0380017913.01.T01:cds;Parent=MsG0380017913.01.T01
Chr3 CDS 102132834 102132936 102132834 ID=MsG0380017913.01.T01:cds;Parent=MsG0380017913.01.T01
Chr3 CDS 102132387 102132732 102132387 ID=MsG0380017913.01.T01:cds;Parent=MsG0380017913.01.T01
Chr3 CDS 102131686 102132051 102131686 ID=MsG0380017913.01.T01:cds;Parent=MsG0380017913.01.T01
Chr3 CDS 102131367 102131445 102131367 ID=MsG0380017913.01.T01:cds;Parent=MsG0380017913.01.T01
Chr3 CDS 102130636 102130848 102130636 ID=MsG0380017913.01.T01:cds;Parent=MsG0380017913.01.T01
Chr3 three_prime_UTR 102130192 102130635 102130192 ID=MsG0380017913.01.T01:three_prime_utr;Parent=MsG0380017913.01.T01
Gene Sequence

>MsG0380017913.01.T01

ATGACTCTCAATTTAGCTGCTGTTGGAGCCTTGCTTCTATGTGTTGCTACTTCTTTGTTTCACATTACTTCAGCTGAAGATCCTTATAAATTCTTCAACTGGAATGTTACTTACGGTGACATTTACCCACTTGGAGTTCGTCAAAGGGGTATATTGATCAATGGCCAATTCCCTGGTCCAGACATTCATTCTGTTACAAACGACAACCTCATTATCAATGTCTTCAACAGTTTGAATGAACCCTTTCTCATCTCATGGAATGGGATCCAGCAGAGAAGGAACTCATTCGAAGATGGTGTTTCGGGAACAACATGCCCCATCCCACCAGGGAGGAACTTCACTTATATACTTCAAGTGAAGGATCAAATTGGAAGCTTTTACTACTTTCCATCTCTAGCATTTCAGAAAGCAGCTGGCGGTTTTGGAGGCATTAGGATACTCAGTAGGCCTAGAATTCCAGTTCCTTTCCCTGAACCAGCTGGAGATTACACTGTCCTTATTGGTGATTGGTACAAGTCCAACCATACGACATTGAAAGCCCATCTTGATAAGGGAAAGAAGCTTCCTATACCTGATGGAGTCCTAATCAATGGTCGTGGACCTAATGGATTATCATTCAACGTTGAACAAGGAAAGACTTATAGACTTAGGATATCAAACGTGGGACTGCAACATTCCCTTAACTTTCGAATTCAAAACCACAAACTGAAGTTGGTAGAAGTGGAAGGAACACACACACTTCAAACCACGTACTCCTCACTTGATGTTCATGTGGGACAATCTTACTCAGTGCTAGTAACTGCTGATCAACCTTCTCAGGACTACTACATTGTGGCTTCCACAAGATTCTCCTCTAAGATTCTCACCACCACTGCGGTGCTTCGCTATAGCAACTCTGCAGGCGCAGTATCAGGCCCACCCCCTGGTGGACCTACAATCCAAGTTGATTGGTCTTTGAACCAAGCCCGCTCAATCAGGACTAACCTTACAGCAAGTGGACCAAGGCCTAACCCACAAGGATCCTACCATTACGGTCTCATAAATACAACAAAGACAATCATTCTGGCTAGCTCTCCTGGTCAGGTTAATGGCAAGCAAAGATATGGAATAAACAGTGTGTCTTATGTTGTCCCAGACACGCCTCTTAAGCTCGCTGATTACTTCAAAATCTCCGGTGTTTTTCGCGTTGGAAGCATATCTGAGAGACCCACTGGTGGTGGCCTTTACCTTGACACATCTGTGATGCAAGCTGATTACAGATCTTTTGTTGAGATTGTCTTCCAAAACAACGAGAACATTGTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTTGTTGGTATGGATGGAGGACAGTGGACAACTTCTAGCAGAAACGGGTACAATCTTCGAGATGCAGTAGCACGTTGCACCACTCAGGTATATCCCTATTCATGGACGGCTATTTATGTTGCACTTGACAACGTTGGAATGTGGAACTTGAGGACCGAGTTTTGGGCACGACAGTATCTTGGCCAACAATTTTATTTACGCGTTTACACAGCATCAACCTCAATCAGAGACGAGTTTCCTATTCCAAAGAATGCACGTCTTTGTGGTAGGGCAAGTGGGAGACACACCCGCCCCCTTTGA
Protein sequence

>MsG0380017913.01.T01

MTLNLAAVGALLLCVATSLFHITSAEDPYKFFNWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLNEPFLISWNGIQQRRNSFEDGVSGTTCPIPPGRNFTYILQVKDQIGSFYYFPSLAFQKAAGGFGGIRILSRPRIPVPFPEPAGDYTVLIGDWYKSNHTTLKAHLDKGKKLPIPDGVLINGRGPNGLSFNVEQGKTYRLRISNVGLQHSLNFRIQNHKLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPSQDYYIVASTRFSSKILTTTAVLRYSNSAGAVSGPPPGGPTIQVDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILASSPGQVNGKQRYGINSVSYVVPDTPLKLADYFKISGVFRVGSISERPTGGGLYLDTSVMQADYRSFVEIVFQNNENIVQSYHLDGYSFFVVGMDGGQWTTSSRNGYNLRDAVARCTTQVYPYSWTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRVYTASTSIRDEFPIPKNARLCGRASGRHTRPL*