AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024658.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024658.01.T01 MTR_2g017930 71.493 442 83 4 74 472 216 657 0.0 566
MsG0580024658.01.T01 MTR_5g085350 37.024 289 146 5 200 452 422 710 3.12e-39 151
MsG0580024658.01.T01 MTR_5g085350 37.024 289 146 5 200 452 435 723 3.41e-39 151
MsG0580024658.01.T01 MTR_3g055310 32.867 286 157 7 197 449 52 335 2.40e-38 143
MsG0580024658.01.T01 MTR_3g055310 32.867 286 157 7 197 449 115 398 6.17e-38 143
MsG0580024658.01.T01 MTR_3g055310 32.867 286 157 7 197 449 167 450 1.84e-37 143
MsG0580024658.01.T01 MTR_3g055310 33.333 282 153 7 201 449 199 478 1.90e-37 144
MsG0580024658.01.T01 MTR_3g055310 33.333 282 153 7 201 449 197 476 2.28e-37 143
MsG0580024658.01.T01 MTR_3g055310 33.333 282 153 7 201 449 224 503 3.58e-37 143
MsG0580024658.01.T01 MTR_3g058570 33.623 345 173 10 182 479 56 391 1.01e-36 139
MsG0580024658.01.T01 MTR_2g020510 32.890 301 166 7 202 467 390 689 1.39e-35 140
MsG0580024658.01.T01 MTR_5g028190 29.836 305 174 6 186 453 224 525 7.06e-35 137
MsG0580024658.01.T01 MTR_2g020450 30.861 337 198 6 156 460 349 682 7.16e-35 138
MsG0580024658.01.T01 MTR_5g091220 33.677 291 160 6 197 455 308 597 9.86e-35 137
MsG0580024658.01.T01 MTR_2g438740 30.986 284 161 6 203 452 277 559 3.03e-34 135
MsG0580024658.01.T01 MTR_5g085340 34.247 292 152 5 200 452 441 731 1.30e-33 135
MsG0580024658.01.T01 MTR_2g438400 31.579 285 161 5 201 452 254 537 7.54e-33 131
MsG0580024658.01.T01 MTR_2g438720 31.834 289 156 6 201 452 400 684 8.84e-33 132
MsG0580024658.01.T01 MTR_3g455790 30.830 253 145 4 197 419 303 555 2.14e-32 130
MsG0580024658.01.T01 MTR_2g438700 31.142 289 158 6 201 452 398 682 4.09e-32 130
MsG0580024658.01.T01 MTR_5g085360 28.947 342 169 7 202 474 405 741 1.81e-30 125
MsG0580024658.01.T01 MTR_2g438640 31.985 272 145 6 217 452 416 683 2.58e-30 125
MsG0580024658.01.T01 MTR_2g438440 29.474 285 167 5 201 452 395 678 7.95e-30 123
MsG0580024658.01.T01 MTR_5g028130 27.961 304 181 6 186 452 26 328 1.93e-29 118
MsG0580024658.01.T01 MTR_5g028930 29.545 264 147 5 189 419 313 570 5.96e-29 120
MsG0580024658.01.T01 MTR_2g020470 29.299 314 172 9 185 467 377 671 6.77e-28 117
MsG0580024658.01.T01 MTR_2g438640 31.439 264 131 5 217 452 416 657 3.89e-27 115
MsG0580024658.01.T01 MTR_3g050500 30.272 294 167 5 200 455 426 719 2.49e-26 113
MsG0580024658.01.T01 MTR_2g438640 38.608 158 94 2 297 452 424 580 5.79e-26 111
MsG0580024658.01.T01 MTR_3g051060 28.188 298 175 6 196 455 428 724 1.99e-25 110
MsG0580024658.01.T01 MTR_2g438760 26.619 278 170 5 209 452 277 554 2.26e-25 109
MsG0580024658.01.T01 MTR_3g452020 27.273 253 154 4 197 419 128 380 3.55e-25 107
MsG0580024658.01.T01 MTR_3g452020 27.273 253 154 4 197 419 304 556 4.51e-25 108
MsG0580024658.01.T01 MTR_5g028450 29.655 290 160 7 202 451 1 286 1.18e-24 104
MsG0580024658.01.T01 MTR_5g028110 37.594 133 82 1 322 453 34 166 4.59e-21 90.9
MsG0580024658.01.T01 MTR_5g028690 35.507 138 86 2 297 431 66 203 4.67e-21 92.4
MsG0580024658.01.T01 MTR_6g017215 32.911 158 105 1 297 453 31 188 7.84e-20 89.0
MsG0580024658.01.T01 MTR_5g028900 33.793 145 82 3 297 441 27 157 7.27e-17 78.2
MsG0580024658.01.T01 MTR_2g438580 42.857 70 40 0 297 366 13 82 2.37e-15 71.6
MsG0580024658.01.T01 MTR_5g028840 32.727 165 96 5 297 449 27 188 4.32e-14 71.6
MsG0580024658.01.T01 MTR_2g438470 27.500 160 85 3 220 348 339 498 4.94e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024658.01.T01 AT3G18670 32.746 284 156 5 202 451 293 575 1.16e-37 145
MsG0580024658.01.T01 AT3G18670 32.746 284 156 5 202 451 348 630 1.17e-37 146
MsG0580024658.01.T01 AT5G35810 32.028 281 152 5 189 431 22 301 1.76e-32 127
MsG0580024658.01.T01 AT5G04730 30.398 352 187 9 146 455 249 584 1.26e-28 119
MsG0580024658.01.T01 AT5G04700 32.819 259 132 8 235 455 397 651 1.59e-28 119
MsG0580024658.01.T01 AT5G04690 32.677 254 121 9 239 451 359 603 4.05e-27 115
MsG0580024658.01.T01 AT5G04690 32.677 254 121 9 239 451 393 637 5.13e-27 115
MsG0580024658.01.T01 AT5G04690 32.677 254 121 9 239 451 379 623 5.37e-27 115
MsG0580024658.01.T01 AT3G54065 37.853 177 76 3 285 428 9 184 7.02e-27 108
MsG0580024658.01.T01 AT5G04680 30.224 268 135 10 235 455 384 646 1.15e-23 105
MsG0580024658.01.T01 AT5G04680 30.224 268 135 10 235 455 370 632 1.15e-23 105
MsG0580024658.01.T01 AT5G04680 30.303 264 132 10 235 451 261 519 1.33e-23 104
MsG0580024658.01.T01 AT5G04680 30.224 268 135 10 235 455 413 675 1.93e-23 104

Find 83 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTATTTACTGCAACAATTT+TGG 0.168186 5:+7816815 MsG0580024658.01.T01:CDS
AGAGCTTTGTATGATGAATT+TGG 0.213139 5:-7814943 None:intergenic
GATGCTCGTGAATGGATAAA+AGG 0.265019 5:+7816495 MsG0580024658.01.T01:CDS
CCGCGGTCGTTTGTGCCTCC+TGG 0.276528 5:-7816588 None:intergenic
CATGGATGTGGTATACTATA+TGG 0.277816 5:+7815058 MsG0580024658.01.T01:CDS
TCCTATATTTGTAGTGTTCA+TGG 0.288165 5:+7816632 MsG0580024658.01.T01:CDS
TAGCAAAGAATGACAATTCA+TGG 0.298588 5:+7815239 MsG0580024658.01.T01:CDS
TACTTATACACTGTTGCTTA+TGG 0.315146 5:+7815354 MsG0580024658.01.T01:CDS
GAGCTTTGTATGATGAATTT+GGG 0.327772 5:-7814942 None:intergenic
GCAACTCCTCTTGCAATTGC+AGG 0.330340 5:-7815624 None:intergenic
TAAGTTACAGTTAAGCTGTT+TGG 0.340215 5:+7812443 MsG0580024658.01.T01:CDS
AGATGTGGAAACTGGCAAAA+AGG 0.344936 5:+7814880 MsG0580024658.01.T01:CDS
GAGTACATCATGAGCTGAAT+TGG 0.350167 5:+7812481 MsG0580024658.01.T01:CDS
TATGCATCATCTTGATAATC+AGG 0.357973 5:-7814821 None:intergenic
AACAGCTTAACTGTAACTTA+TGG 0.364660 5:-7812440 None:intergenic
TAGTAATATCATTATCTTGA+AGG 0.373856 5:-7814847 None:intergenic
ATAATCAAAGCTTACACCTT+TGG 0.378250 5:-7815091 None:intergenic
ACATTCGGAAAATTTCTAAC+TGG 0.379499 5:-7815492 None:intergenic
CACATCACCTTGTGAGTTGT+GGG 0.403121 5:+7816716 MsG0580024658.01.T01:CDS
AATCATAGAGATAGTAGAAT+TGG 0.404231 5:+7815390 MsG0580024658.01.T01:CDS
AAAAGAGAAGATGTGGAAAC+TGG 0.411277 5:+7814872 MsG0580024658.01.T01:CDS
ATAGGATGATAGAGTAATCT+TGG 0.413261 5:-7816615 None:intergenic
TTCTATGGCCACAACCATCT+TGG 0.414784 5:+7816794 MsG0580024658.01.T01:CDS
TTGCGATCCTCCTTTAAAAT+CGG 0.419403 5:-7815590 None:intergenic
ATCAAAACTCTTATAATCAT+AGG 0.424497 5:-7812384 None:intergenic
ACCATGAACACTACAAATAT+AGG 0.425279 5:-7816633 None:intergenic
TGTAGCACTTGCAAGTTCAT+TGG 0.428772 5:+7816665 MsG0580024658.01.T01:CDS
CGCGGTCGTTTGTGCCTCCT+GGG 0.434459 5:-7816587 None:intergenic
AAACCTGCCATTAGTTTCCT+AGG 0.438939 5:-7816756 None:intergenic
TGTTCCTCAAGTTGATCAAA+AGG 0.442089 5:+7816983 MsG0580024658.01.T01:CDS
TTGCTTATGGCAGCTTGTAA+TGG 0.447918 5:+7815367 MsG0580024658.01.T01:CDS
GTGTATAAGTAATAGCTTTG+TGG 0.454421 5:-7815342 None:intergenic
TCAAGTTAGATAAGAGCAAA+TGG 0.454803 5:+7816844 MsG0580024658.01.T01:CDS
AAAATGGTGAGACATCTTGC+TGG 0.459972 5:+7815526 MsG0580024658.01.T01:CDS
TGTCGCGACAGTTGTCTTTG+CGG 0.463671 5:+7816551 MsG0580024658.01.T01:CDS
TTCTGAAAGATGCTCGTGAA+TGG 0.471142 5:+7816487 MsG0580024658.01.T01:CDS
ACTTTATATGTTGCCATGAA+AGG 0.473275 5:+7816924 MsG0580024658.01.T01:CDS
CTCGAGCAGCGTGGATAACT+CGG 0.479794 5:+7812506 MsG0580024658.01.T01:CDS
TGATACTTTGCTTGCTACTA+CGG 0.482322 5:+7812551 MsG0580024658.01.T01:CDS
TGCCATAAGACATCCTTTCA+TGG 0.486948 5:-7816937 None:intergenic
CAGACATGCTCAATTGATTG+AGG 0.487698 5:-7815427 None:intergenic
TGCCATGAAAGGATGTCTTA+TGG 0.490498 5:+7816935 MsG0580024658.01.T01:CDS
AGTACATCATGAGCTGAATT+GGG 0.491013 5:+7812482 MsG0580024658.01.T01:CDS
GATGTCTTATGGCACTCCTT+AGG 0.491916 5:+7816946 MsG0580024658.01.T01:CDS
TCACATCACCTTGTGAGTTG+TGG 0.495251 5:+7816715 MsG0580024658.01.T01:CDS
ATGGACAGAACAGTTTGTAT+AGG 0.496757 5:+7815280 MsG0580024658.01.T01:CDS
ATGCTCGTGAATGGATAAAA+GGG 0.500318 5:+7816496 MsG0580024658.01.T01:CDS
TGCAAGTTCATTGGCTTCAG+TGG 0.501558 5:+7816674 MsG0580024658.01.T01:CDS
ATTTGTAGTGTTCATGGTCA+TGG 0.508532 5:+7816638 MsG0580024658.01.T01:CDS
TGCAATTGCAGGGCATAACC+AGG 0.508562 5:-7815613 None:intergenic
GTCTCTACCTAGGAAACTAA+TGG 0.510880 5:+7816749 MsG0580024658.01.T01:CDS
AAGTATCAACTATCCAATCT+TGG 0.511051 5:-7812536 None:intergenic
ATTCATCATACAAAGCTCTC+AGG 0.520254 5:+7814947 MsG0580024658.01.T01:CDS
GCGGCAGCTTACACTGTCCC+AGG 0.531643 5:+7816570 MsG0580024658.01.T01:CDS
CTTGCTACTACGGAAGCAGT+TGG 0.538173 5:+7812561 MsG0580024658.01.T01:CDS
TGTTGCAGTAAATACCAAGA+TGG 0.543077 5:-7816808 None:intergenic
GAAACTTAGTTCAATAGCAA+TGG 0.547491 5:+7815261 MsG0580024658.01.T01:CDS
TGTTTGGAGAAAAGTGCTTA+CGG 0.555668 5:+7812459 MsG0580024658.01.T01:CDS
TTTAAAGGAGGATCGCAACC+TGG 0.555704 5:+7815595 MsG0580024658.01.T01:CDS
CTTTAAAATCGGCAATATTG+CGG 0.556459 5:-7815579 None:intergenic
AATTGCAAGAGGAGTTGCAT+TGG 0.556764 5:+7815629 MsG0580024658.01.T01:CDS
CAATCTTCTTAAGACTCCTA+AGG 0.556847 5:-7816962 None:intergenic
CAACTCCTCTTGCAATTGCA+GGG 0.566425 5:-7815623 None:intergenic
AGTAAATACCAAGATGGTTG+TGG 0.567450 5:-7816802 None:intergenic
AAGGTGATGTGAGGATTGAA+AGG 0.575166 5:-7816704 None:intergenic
CTACCTAGGAAACTAATGGC+AGG 0.580520 5:+7816753 MsG0580024658.01.T01:CDS
ATATGGAAGGCTCTTTCCAA+AGG 0.592223 5:+7815075 MsG0580024658.01.T01:CDS
CTAAAATCCCACAACTCACA+AGG 0.593605 5:-7816723 None:intergenic
TTTGTATGATGAATTTGGGG+TGG 0.594459 5:-7814938 None:intergenic
TGCTTCCGTTGAGTTTGATG+TGG 0.602934 5:-7814914 None:intergenic
TGAGCAGAACATACTGTACA+TGG 0.607287 5:+7815456 MsG0580024658.01.T01:CDS
CAAAGACAACTGTCGCGACA+AGG 0.614573 5:-7816548 None:intergenic
GATGTGGTATACTATATGGA+AGG 0.622305 5:+7815062 MsG0580024658.01.T01:CDS
AAGCAGTTGGAGAGAAAATG+TGG 0.630940 5:+7812574 MsG0580024658.01.T01:CDS
TTATGCCCTGCAATTGCAAG+AGG 0.636536 5:+7815618 MsG0580024658.01.T01:CDS
AGCTTTGTATGATGAATTTG+GGG 0.637650 5:-7814941 None:intergenic
GGCCATAGAAAAGAACAAGA+AGG 0.647299 5:-7816781 None:intergenic
ATGAACCACATCAAACTCAA+CGG 0.649423 5:+7814909 MsG0580024658.01.T01:CDS
ACAACTCACAAGGTGATGTG+AGG 0.665806 5:-7816713 None:intergenic
AGAGTAATCTTGGTAAGCCG+CGG 0.674960 5:-7816605 None:intergenic
CCAGGAGGCACAAACGACCG+CGG 0.691713 5:+7816588 MsG0580024658.01.T01:CDS
GCAGCTTACACTGTCCCAGG+AGG 0.705291 5:+7816573 MsG0580024658.01.T01:CDS
GAATTGGGACTCGAGCAGCG+TGG 0.739005 5:+7812497 MsG0580024658.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATTATTATTATTAT+TGG + Chr5:7812646-7812665 MsG0580024658.01.T01:intron 0.0%
!! TAATAATAATTAAAATAAGC+GGG - Chr5:7812636-7812655 None:intergenic 10.0%
!!! TTTTTTCTTATATGAAAAAT+TGG + Chr5:7814117-7814136 MsG0580024658.01.T01:intron 10.0%
!! AAGAAAAAATTCATATCTAT+TGG - Chr5:7814106-7814125 None:intergenic 15.0%
!! ATGTCATTATTTACTAAAAT+GGG + Chr5:7812742-7812761 MsG0580024658.01.T01:intron 15.0%
!! ATTTAGTGAAAATAATCAAA+TGG - Chr5:7813261-7813280 None:intergenic 15.0%
!! CAATACATAATTACTATTAA+TGG + Chr5:7814568-7814587 MsG0580024658.01.T01:intron 15.0%
!! CATTAATAGTAATTATGTAT+TGG - Chr5:7814570-7814589 None:intergenic 15.0%
!! TATGTCATTATTTACTAAAA+TGG + Chr5:7812741-7812760 MsG0580024658.01.T01:intron 15.0%
!! TTTAGTGAAAATAATCAAAT+GGG - Chr5:7813260-7813279 None:intergenic 15.0%
!! TTTGAATTTGAATTTGAATT+TGG + Chr5:7812839-7812858 MsG0580024658.01.T01:intron 15.0%
!!! AAGGCTTTTATTTTAATTTT+CGG + Chr5:7813375-7813394 MsG0580024658.01.T01:intron 15.0%
!!! ATTTTTAACTCTTTAAGAAA+TGG - Chr5:7814540-7814559 None:intergenic 15.0%
!!! GTTTTCTATATTTTCTTTAA+AGG + Chr5:7813284-7813303 MsG0580024658.01.T01:intron 15.0%
!!! TTGTATATCTAGTATTTTAT+AGG - Chr5:7814616-7814635 None:intergenic 15.0%
!!! TTTTTTTTTAATGGACTTAA+AGG - Chr5:7814452-7814471 None:intergenic 15.0%
!! AATGTAAAACATTCTCAATT+AGG - Chr5:7813127-7813146 None:intergenic 20.0%
!! ATAAAGTAGAGAAATTGAAA+CGG + Chr5:7812878-7812897 MsG0580024658.01.T01:intron 20.0%
!! ATGTAAAACATTCTCAATTA+GGG - Chr5:7813126-7813145 None:intergenic 20.0%
!! CACATCTAATAAATAGAATT+AGG - Chr5:7816294-7816313 None:intergenic 20.0%
!! TAGTAATATCATTATCTTGA+AGG - Chr5:7814850-7814869 None:intergenic 20.0%
!! TGTCATTATTTACTAAAATG+GGG + Chr5:7812743-7812762 MsG0580024658.01.T01:intron 20.0%
!! TTACAGCAGAAAATTTAAAT+TGG + Chr5:7816157-7816176 MsG0580024658.01.T01:intron 20.0%
!! TTCTTATATGAAAAATTGGA+GGG + Chr5:7814121-7814140 MsG0580024658.01.T01:intron 20.0%
!! TTTCTTATATGAAAAATTGG+AGG + Chr5:7814120-7814139 MsG0580024658.01.T01:intron 20.0%
!!! ACAGCTTTATTTTTATTGAA+AGG + Chr5:7814252-7814271 MsG0580024658.01.T01:intron 20.0%
!!! AGGTTATTTATCAAGATTTT+CGG + Chr5:7813304-7813323 MsG0580024658.01.T01:intron 20.0%
!!! ATTTCTTATTTCTTTCTCTT+TGG + Chr5:7814182-7814201 MsG0580024658.01.T01:intron 20.0%
!!! CAGATTATTAGAATTTTAGA+CGG + Chr5:7813523-7813542 MsG0580024658.01.T01:intron 20.0%
!!! CAGCTTTATTTTTATTGAAA+GGG + Chr5:7814253-7814272 MsG0580024658.01.T01:intron 20.0%
!!! GAATGATGTTTTGAAAATTA+CGG + Chr5:7812973-7812992 MsG0580024658.01.T01:intron 20.0%
!!! TAGAAAAACTCATTTTTCAT+TGG + Chr5:7815903-7815922 MsG0580024658.01.T01:intron 20.0%
!!! TTATTTTTATTGAAAGGGTA+CGG + Chr5:7814258-7814277 MsG0580024658.01.T01:intron 20.0%
!!! TTTCGGCAATATATTTTTAA+AGG + Chr5:7813356-7813375 MsG0580024658.01.T01:intron 20.0%
!!! TTTCTTATTTCTTTCTCTTT+GGG + Chr5:7814183-7814202 MsG0580024658.01.T01:intron 20.0%
!!! TTTTGGTTGAAAATTTCTTA+TGG - Chr5:7815026-7815045 None:intergenic 20.0%
! AATCATAGAGATAGTAGAAT+TGG + Chr5:7815390-7815409 MsG0580024658.01.T01:CDS 25.0%
! AATGTTGAAAAAACGGAAAA+TGG + Chr5:7815510-7815529 MsG0580024658.01.T01:CDS 25.0%
! CAAAAGTAGTAAGTTTATCT+TGG - Chr5:7815853-7815872 None:intergenic 25.0%
! GTATATACTTCCAATCAAAT+AGG - Chr5:7813471-7813490 None:intergenic 25.0%
! TAAGACAACTTAAAATGGTA+AGG + Chr5:7815765-7815784 MsG0580024658.01.T01:intron 25.0%
! TAGGTTAAGACAACTTAAAA+TGG + Chr5:7815760-7815779 MsG0580024658.01.T01:intron 25.0%
! TTGAAGTATACCTATTTGAT+TGG + Chr5:7813458-7813477 MsG0580024658.01.T01:intron 25.0%
! TTGTGAATGATGTAATGATA+AGG - Chr5:7816414-7816433 None:intergenic 25.0%
!! AAATATGTCATTTGAAACTC+TGG + Chr5:7813854-7813873 MsG0580024658.01.T01:intron 25.0%
!! AAATTTTCAACCAAAATTGC+AGG + Chr5:7815030-7815049 MsG0580024658.01.T01:intron 25.0%
!! AGGATATATGAAATTTTCGA+AGG - Chr5:7814379-7814398 None:intergenic 25.0%
!! ATCTAGTATTTTATAGGTCA+AGG - Chr5:7814610-7814629 None:intergenic 25.0%
!! CATTTTGTTCATGTTTAGAA+TGG + Chr5:7815172-7815191 MsG0580024658.01.T01:intron 25.0%
!! CTTTTTAAACTATGCAAGTT+TGG + Chr5:7815874-7815893 MsG0580024658.01.T01:intron 25.0%
!! TAGAAAAAGGTACATGTATT+TGG + Chr5:7814075-7814094 MsG0580024658.01.T01:intron 25.0%
!! TTTTCCGAATGTTGAAAAAA+CGG + Chr5:7815503-7815522 MsG0580024658.01.T01:CDS 25.0%
!!! AAAAACTCATTTTTCATTGG+TGG + Chr5:7815906-7815925 MsG0580024658.01.T01:intron 25.0%
!!! AGGCACATGTTTTTTTTTAA+TGG - Chr5:7814461-7814480 None:intergenic 25.0%
!!! GGAAGAGTATTAAAAAACTT+TGG + Chr5:7815193-7815212 MsG0580024658.01.T01:CDS 25.0%
!!! TTTCGGCAGTTTATTTTAAA+AGG + Chr5:7813392-7813411 MsG0580024658.01.T01:intron 25.0%
!!! TTTTCCGTTTTTTCAACATT+CGG - Chr5:7815510-7815529 None:intergenic 25.0%
AAAGTTATCAGAGATTTACG+AGG - Chr5:7814399-7814418 None:intergenic 30.0%
AACAGCTTAACTGTAACTTA+TGG - Chr5:7812443-7812462 None:intergenic 30.0%
AAGGAGAAGCTATTAGTAAT+AGG - Chr5:7814721-7814740 None:intergenic 30.0%
AAGTATCAACTATCCAATCT+TGG - Chr5:7812539-7812558 None:intergenic 30.0%
AATCTTAAAATCATAGCCGT+CGG - Chr5:7816032-7816051 None:intergenic 30.0%
ACATTCGGAAAATTTCTAAC+TGG - Chr5:7815495-7815514 None:intergenic 30.0%
ACCATGAACACTACAAATAT+AGG - Chr5:7816636-7816655 None:intergenic 30.0%
ACCTAATTGAAATCACTACT+AGG - Chr5:7813024-7813043 None:intergenic 30.0%
ACCTAGTAGTGATTTCAATT+AGG + Chr5:7813020-7813039 MsG0580024658.01.T01:intron 30.0%
ACTTTATATGTTGCCATGAA+AGG + Chr5:7816924-7816943 MsG0580024658.01.T01:CDS 30.0%
AGTAATCTGCTTGAATTTGT+TGG + Chr5:7815998-7816017 MsG0580024658.01.T01:intron 30.0%
ATAATCAAAGCTTACACCTT+TGG - Chr5:7815094-7815113 None:intergenic 30.0%
ATAGGATGATAGAGTAATCT+TGG - Chr5:7816618-7816637 None:intergenic 30.0%
ATGACGAGGAAGATATTAAA+AGG - Chr5:7812777-7812796 None:intergenic 30.0%
CAGCAGAAAATTTAAATTGG+AGG + Chr5:7816160-7816179 MsG0580024658.01.T01:intron 30.0%
CGTAAACAGGATTAAAATCT+TGG + Chr5:7813892-7813911 MsG0580024658.01.T01:intron 30.0%
CGTTATATAAGTTCATGGAT+TGG + Chr5:7812797-7812816 MsG0580024658.01.T01:intron 30.0%
GAAACTTAGTTCAATAGCAA+TGG + Chr5:7815261-7815280 MsG0580024658.01.T01:CDS 30.0%
GTCATCGTTATATAAGTTCA+TGG + Chr5:7812792-7812811 MsG0580024658.01.T01:intron 30.0%
GTCGTGACATTATTAGAAAA+AGG + Chr5:7814062-7814081 MsG0580024658.01.T01:intron 30.0%
TAAGTTACAGTTAAGCTGTT+TGG + Chr5:7812443-7812462 MsG0580024658.01.T01:CDS 30.0%
TACATAGTATAATGTGCACA+AGG + Chr5:7815826-7815845 MsG0580024658.01.T01:intron 30.0%
TACCAACTATAGCTAATAGT+TGG + Chr5:7814779-7814798 MsG0580024658.01.T01:intron 30.0%
TACTAGAAAAAGAGAAGATG+TGG + Chr5:7814865-7814884 MsG0580024658.01.T01:CDS 30.0%
TAGCAAAGAATGACAATTCA+TGG + Chr5:7815239-7815258 MsG0580024658.01.T01:CDS 30.0%
TCAAGTTAGATAAGAGCAAA+TGG + Chr5:7816844-7816863 MsG0580024658.01.T01:CDS 30.0%
TCCTATATTTGTAGTGTTCA+TGG + Chr5:7816632-7816651 MsG0580024658.01.T01:CDS 30.0%
TCTTCATGTCTTTACAATGT+TGG + Chr5:7813427-7813446 MsG0580024658.01.T01:intron 30.0%
TGAAGTCTAGAGATAGAATT+AGG - Chr5:7814669-7814688 None:intergenic 30.0%
TGGAATGCATGCATTAAATT+AGG - Chr5:7815707-7815726 None:intergenic 30.0%
TTACTAGGAATTGAATAGAG+AGG - Chr5:7816265-7816284 None:intergenic 30.0%
TTCCAACTATTAGCTATAGT+TGG - Chr5:7814784-7814803 None:intergenic 30.0%
TTTCGTTATGTTGTGAAATG+TGG + Chr5:7812931-7812950 MsG0580024658.01.T01:intron 30.0%
! AGAATTAGGTTAGTGTTACT+AGG - Chr5:7816280-7816299 None:intergenic 30.0%
! AGAGCTTTGTATGATGAATT+TGG - Chr5:7814946-7814965 None:intergenic 30.0%
! AGCTTTGTATGATGAATTTG+GGG - Chr5:7814944-7814963 None:intergenic 30.0%
! GAGCTTTGTATGATGAATTT+GGG - Chr5:7814945-7814964 None:intergenic 30.0%
! GAGGCTCTTATTATGATTTT+CGG + Chr5:7813339-7813358 MsG0580024658.01.T01:intron 30.0%
! GGTATTTACTGCAACAATTT+TGG + Chr5:7816815-7816834 MsG0580024658.01.T01:CDS 30.0%
! GTGTATAAGTAATAGCTTTG+TGG - Chr5:7815345-7815364 None:intergenic 30.0%
! TACTTATACACTGTTGCTTA+TGG + Chr5:7815354-7815373 MsG0580024658.01.T01:CDS 30.0%
! TATGCATCATCTTGATAATC+AGG - Chr5:7814824-7814843 None:intergenic 30.0%
! TTTTCGGCAATATCTTTTAG+AGG + Chr5:7813320-7813339 MsG0580024658.01.T01:intron 30.0%
!! AAGAGTTTTGATCGAAGTTT+TGG + Chr5:7812395-7812414 MsG0580024658.01.T01:CDS 30.0%
!! AATCTTTTAATTGTCGTCGA+AGG - Chr5:7814740-7814759 None:intergenic 30.0%
!! ATAAGTTCATGGATTGGATT+TGG + Chr5:7812803-7812822 MsG0580024658.01.T01:intron 30.0%
!! CTTTAAAATCGGCAATATTG+CGG - Chr5:7815582-7815601 None:intergenic 30.0%
!!! AATATTGCCGATTTTAAAGG+AGG + Chr5:7815583-7815602 MsG0580024658.01.T01:CDS 30.0%
!!! ATCGAAGTTTTGGATGAATT+CGG + Chr5:7812405-7812424 MsG0580024658.01.T01:CDS 30.0%
AAAAGAGAAGATGTGGAAAC+TGG + Chr5:7814872-7814891 MsG0580024658.01.T01:CDS 35.0%
AAATGAAAGAGTAAGCCACA+AGG - Chr5:7813648-7813667 None:intergenic 35.0%
AGCAAAAGAGACATTCATCA+AGG - Chr5:7813758-7813777 None:intergenic 35.0%
AGTAAATACCAAGATGGTTG+TGG - Chr5:7816805-7816824 None:intergenic 35.0%
AGTACATCATGAGCTGAATT+GGG + Chr5:7812482-7812501 MsG0580024658.01.T01:CDS 35.0%
ATCATTGCAAAAATGCTGAC+AGG - Chr5:7816897-7816916 None:intergenic 35.0%
ATCTTAAAATCATAGCCGTC+GGG - Chr5:7816031-7816050 None:intergenic 35.0%
ATGAACCACATCAAACTCAA+CGG + Chr5:7814909-7814928 MsG0580024658.01.T01:CDS 35.0%
ATGCTCGTGAATGGATAAAA+GGG + Chr5:7816496-7816515 MsG0580024658.01.T01:CDS 35.0%
ATGGACAGAACAGTTTGTAT+AGG + Chr5:7815280-7815299 MsG0580024658.01.T01:CDS 35.0%
ATTCATCATACAAAGCTCTC+AGG + Chr5:7814947-7814966 MsG0580024658.01.T01:CDS 35.0%
ATTGGATTTGGATTCGGATT+TGG + Chr5:7812815-7812834 MsG0580024658.01.T01:intron 35.0%
ATTTGTAGTGTTCATGGTCA+TGG + Chr5:7816638-7816657 MsG0580024658.01.T01:CDS 35.0%
CAATCTTCTTAAGACTCCTA+AGG - Chr5:7816965-7816984 None:intergenic 35.0%
CATAGATCCTAAGTGATAAG+AGG + Chr5:7814695-7814714 MsG0580024658.01.T01:intron 35.0%
CATGGATGTGGTATACTATA+TGG + Chr5:7815058-7815077 MsG0580024658.01.T01:CDS 35.0%
GAACTTATATAACGATGACG+AGG - Chr5:7812791-7812810 None:intergenic 35.0%
GATGTGGTATACTATATGGA+AGG + Chr5:7815062-7815081 MsG0580024658.01.T01:CDS 35.0%
GGCAAATGTTCAAAATACAG+AGG + Chr5:7813913-7813932 MsG0580024658.01.T01:intron 35.0%
TAACCTATGCAATATTGCGT+AGG - Chr5:7815747-7815766 None:intergenic 35.0%
TAATAGGCCTCTTATCACTT+AGG - Chr5:7814705-7814724 None:intergenic 35.0%
TCATTGCAAAAATGCTGACA+GGG - Chr5:7816896-7816915 None:intergenic 35.0%
TGTTAGTAACTCAGATTGGT+TGG - Chr5:7816117-7816136 None:intergenic 35.0%
TGTTGCAGTAAATACCAAGA+TGG - Chr5:7816811-7816830 None:intergenic 35.0%
TTTGGGAAGAAAAATGAGGT+TGG + Chr5:7814200-7814219 MsG0580024658.01.T01:intron 35.0%
TTTGTATGATGAATTTGGGG+TGG - Chr5:7814941-7814960 None:intergenic 35.0%
! ATACTCTGTCGAATTTTCAG+TGG + Chr5:7813936-7813955 MsG0580024658.01.T01:intron 35.0%
! CCAAAATTGCAGGTTTTTCA+TGG + Chr5:7815040-7815059 MsG0580024658.01.T01:intron 35.0%
! CCATGAAAAACCTGCAATTT+TGG - Chr5:7815043-7815062 None:intergenic 35.0%
! GTGGATTTTCATGCGTATAA+AGG + Chr5:7813496-7813515 MsG0580024658.01.T01:intron 35.0%
! TCTCTTTGGGAAGAAAAATG+AGG + Chr5:7814196-7814215 MsG0580024658.01.T01:intron 35.0%
! TGAACTAACTTGTGACTTGA+AGG - Chr5:7814481-7814500 None:intergenic 35.0%
! TGATACTTTGCTTGCTACTA+CGG + Chr5:7812551-7812570 MsG0580024658.01.T01:CDS 35.0%
! TGCCTTCTTGTTCTTTTCTA+TGG + Chr5:7816779-7816798 MsG0580024658.01.T01:CDS 35.0%
! TTGGAAGTATATACACTGTG+TGG + Chr5:7813477-7813496 MsG0580024658.01.T01:intron 35.0%
!! TCATGGATTGGATTTGGATT+CGG + Chr5:7812809-7812828 MsG0580024658.01.T01:intron 35.0%
!! TGTTCCTCAAGTTGATCAAA+AGG + Chr5:7816983-7817002 MsG0580024658.01.T01:CDS 35.0%
!! TGTTTGGAGAAAAGTGCTTA+CGG + Chr5:7812459-7812478 MsG0580024658.01.T01:CDS 35.0%
!! TTGCGATCCTCCTTTAAAAT+CGG - Chr5:7815593-7815612 None:intergenic 35.0%
!!! CGCAATATTGCCGATTTTAA+AGG + Chr5:7815580-7815599 MsG0580024658.01.T01:CDS 35.0%
AAAATGGTGAGACATCTTGC+TGG + Chr5:7815526-7815545 MsG0580024658.01.T01:CDS 40.0%
AACTAGAAGGGAAACACACA+TGG - Chr5:7813598-7813617 None:intergenic 40.0%
AAGCAGTTGGAGAGAAAATG+TGG + Chr5:7812574-7812593 MsG0580024658.01.T01:CDS 40.0%
AAGGTGATGTGAGGATTGAA+AGG - Chr5:7816707-7816726 None:intergenic 40.0%
AATTGCAAGAGGAGTTGCAT+TGG + Chr5:7815629-7815648 MsG0580024658.01.T01:CDS 40.0%
ACTCGGAAAAATGCCAAGAT+TGG + Chr5:7812523-7812542 MsG0580024658.01.T01:CDS 40.0%
AGATGTGGAAACTGGCAAAA+AGG + Chr5:7814880-7814899 MsG0580024658.01.T01:CDS 40.0%
ATATGGAAGGCTCTTTCCAA+AGG + Chr5:7815075-7815094 MsG0580024658.01.T01:CDS 40.0%
ATGTGTGTTTCCCTTCTAGT+TGG + Chr5:7813597-7813616 MsG0580024658.01.T01:intron 40.0%
ATTCAAGAGTCAAACCCAGA+TGG + Chr5:7814350-7814369 MsG0580024658.01.T01:intron 40.0%
CAAGCAGATTACTGTGTGAA+TGG - Chr5:7815991-7816010 None:intergenic 40.0%
CAGACATGCTCAATTGATTG+AGG - Chr5:7815430-7815449 None:intergenic 40.0%
CATCCTACGCAATATTGCAT+AGG + Chr5:7815741-7815760 MsG0580024658.01.T01:intron 40.0%
CCAAAATTCACAATCGTGAC+CGG - Chr5:7814042-7814061 None:intergenic 40.0%
CTAAAATCCCACAACTCACA+AGG - Chr5:7816726-7816745 None:intergenic 40.0%
GAAAAGAGCTATCCGTTAGA+TGG + Chr5:7813163-7813182 MsG0580024658.01.T01:intron 40.0%
GAAACTCTGGATGAGAATAC+AGG + Chr5:7813867-7813886 MsG0580024658.01.T01:intron 40.0%
GAGAATACAGGTTCGTAAAC+AGG + Chr5:7813879-7813898 MsG0580024658.01.T01:intron 40.0%
GAGTACATCATGAGCTGAAT+TGG + Chr5:7812481-7812500 MsG0580024658.01.T01:CDS 40.0%
GATGCTCGTGAATGGATAAA+AGG + Chr5:7816495-7816514 MsG0580024658.01.T01:CDS 40.0%
GATGTGGAAACTGGCAAAAA+GGG + Chr5:7814881-7814900 MsG0580024658.01.T01:CDS 40.0%
GGCCATAGAAAAGAACAAGA+AGG - Chr5:7816784-7816803 None:intergenic 40.0%
GGTAGAATTACCCCATTAGA+TGG + Chr5:7813041-7813060 MsG0580024658.01.T01:intron 40.0%
GTCTCTACCTAGGAAACTAA+TGG + Chr5:7816749-7816768 MsG0580024658.01.T01:CDS 40.0%
GTTTGACTCTTGAATGCAGA+AGG - Chr5:7814345-7814364 None:intergenic 40.0%
TAGGTCAAGGACACAAGTTA+AGG - Chr5:7814597-7814616 None:intergenic 40.0%
TCATTAGAGAGACACCAACA+TGG - Chr5:7815933-7815952 None:intergenic 40.0%
TGAGCAGAACATACTGTACA+TGG + Chr5:7815456-7815475 MsG0580024658.01.T01:CDS 40.0%
TGCCATAAGACATCCTTTCA+TGG - Chr5:7816940-7816959 None:intergenic 40.0%
TGCCATGAAAGGATGTCTTA+TGG + Chr5:7816935-7816954 MsG0580024658.01.T01:CDS 40.0%
TGTAGCACTTGCAAGTTCAT+TGG + Chr5:7816665-7816684 MsG0580024658.01.T01:CDS 40.0%
TTCAAGAGTCAAACCCAGAT+GGG + Chr5:7814351-7814370 MsG0580024658.01.T01:intron 40.0%
TTGCTTATGGCAGCTTGTAA+TGG + Chr5:7815367-7815386 MsG0580024658.01.T01:CDS 40.0%
! AAACCTGCCATTAGTTTCCT+AGG - Chr5:7816759-7816778 None:intergenic 40.0%
! AAGTTCATCTGTGTCACTCT+TGG + Chr5:7813722-7813741 MsG0580024658.01.T01:intron 40.0%
! AGTTGTCAAGTGTCGTCAAT+AGG + Chr5:7813985-7814004 MsG0580024658.01.T01:intron 40.0%
! CGGTCACGATTGTGAATTTT+GGG + Chr5:7814040-7814059 MsG0580024658.01.T01:intron 40.0%
! CTTGTGAGTTGTGGGATTTT+AGG + Chr5:7816724-7816743 MsG0580024658.01.T01:CDS 40.0%
! GAAGAAAAATGAGGTTGGCT+AGG + Chr5:7814205-7814224 MsG0580024658.01.T01:intron 40.0%
! TCAGAGTATCTGCAGCTATT+TGG + Chr5:7813793-7813812 MsG0580024658.01.T01:intron 40.0%
! TGCTCCTTTTGATCAACTTG+AGG - Chr5:7816990-7817009 None:intergenic 40.0%
! TGTTGATTATGAACGGATGC+AGG + Chr5:7814228-7814247 MsG0580024658.01.T01:intron 40.0%
! TTCTGAAAGATGCTCGTGAA+TGG + Chr5:7816487-7816506 MsG0580024658.01.T01:CDS 40.0%
! TTGCAGGTTTTTCATGGATG+TGG + Chr5:7815046-7815065 MsG0580024658.01.T01:intron 40.0%
!! AGGATGCTACAACTTGTTAG+TGG - Chr5:7815727-7815746 None:intergenic 40.0%
!! ATTTTAGGAGGTCTCTACCT+AGG + Chr5:7816739-7816758 MsG0580024658.01.T01:CDS 40.0%
!! CTGCTTGAATTTGTTGGATC+AGG + Chr5:7816004-7816023 MsG0580024658.01.T01:intron 40.0%
!! GGCTAGGTGTTGATTATGAA+CGG + Chr5:7814221-7814240 MsG0580024658.01.T01:intron 40.0%
!! TTTTCATTGGTGGTCCATGT+TGG + Chr5:7815916-7815935 MsG0580024658.01.T01:intron 40.0%
!!! CTTGAATGCAGAAGGCATTT+TGG - Chr5:7814337-7814356 None:intergenic 40.0%
AACAACCACCACCAACTAGA+AGG - Chr5:7813611-7813630 None:intergenic 45.0%
AATCACTACTAGGTGCACCT+AGG - Chr5:7813014-7813033 None:intergenic 45.0%
ACAACCACCACCAACTAGAA+GGG - Chr5:7813610-7813629 None:intergenic 45.0%
ACAACTCACAAGGTGATGTG+AGG - Chr5:7816716-7816735 None:intergenic 45.0%
ACGACAACAACCAAACTGCA+AGG + Chr5:7816436-7816455 MsG0580024658.01.T01:intron 45.0%
AGAGTAATCTTGGTAAGCCG+CGG - Chr5:7816608-7816627 None:intergenic 45.0%
CAACTCCTCTTGCAATTGCA+GGG - Chr5:7815626-7815645 None:intergenic 45.0%
CACATCACCTTGTGAGTTGT+GGG + Chr5:7816716-7816735 MsG0580024658.01.T01:CDS 45.0%
CGAACTAGAACATCCTAGTC+CGG - Chr5:7814015-7814034 None:intergenic 45.0%
CGACAACAACCAAACTGCAA+GGG + Chr5:7816437-7816456 MsG0580024658.01.T01:intron 45.0%
CTAATGGTGGCCTATCCATA+GGG - Chr5:7813195-7813214 None:intergenic 45.0%
CTAATGGTGGCCTTTCCATA+GGG - Chr5:7813073-7813092 None:intergenic 45.0%
CTACCTAGGAAACTAATGGC+AGG + Chr5:7816753-7816772 MsG0580024658.01.T01:CDS 45.0%
GATGTCTTATGGCACTCCTT+AGG + Chr5:7816946-7816965 MsG0580024658.01.T01:CDS 45.0%
GCGCTGTTAGTAACTCAGAT+TGG - Chr5:7816121-7816140 None:intergenic 45.0%
GGTTATAATGACGACGACCT+AGG + Chr5:7812994-7813013 MsG0580024658.01.T01:intron 45.0%
TAATGGTGGCCTATCCATAG+GGG - Chr5:7813194-7813213 None:intergenic 45.0%
TAATGGTGGCCTTTCCATAG+GGG - Chr5:7813072-7813091 None:intergenic 45.0%
TCACATCACCTTGTGAGTTG+TGG + Chr5:7816715-7816734 MsG0580024658.01.T01:CDS 45.0%
TGCTTCCGTTGAGTTTGATG+TGG - Chr5:7814917-7814936 None:intergenic 45.0%
TGTCTCTCACTAAGTCCTTG+TGG + Chr5:7813630-7813649 MsG0580024658.01.T01:intron 45.0%
TTATGCCCTGCAATTGCAAG+AGG + Chr5:7815618-7815637 MsG0580024658.01.T01:CDS 45.0%
TTCTATGGCCACAACCATCT+TGG + Chr5:7816794-7816813 MsG0580024658.01.T01:CDS 45.0%
TTTAAAGGAGGATCGCAACC+TGG + Chr5:7815595-7815614 MsG0580024658.01.T01:CDS 45.0%
! AATTTTCGAAGGCTCCCATC+TGG - Chr5:7814368-7814387 None:intergenic 45.0%
! ATTTTCGAAGGCTCCCATCT+GGG - Chr5:7814367-7814386 None:intergenic 45.0%
! CCGGTCACGATTGTGAATTT+TGG + Chr5:7814039-7814058 MsG0580024658.01.T01:intron 45.0%
! GTGAGTTGTGGGATTTTAGG+AGG + Chr5:7816727-7816746 MsG0580024658.01.T01:CDS 45.0%
! TGTGTTTCCCTTCTAGTTGG+TGG + Chr5:7813600-7813619 MsG0580024658.01.T01:intron 45.0%
! TTCATCTGTGTCACTCTTGG+TGG + Chr5:7813725-7813744 MsG0580024658.01.T01:intron 45.0%
!! TGCAAGTTCATTGGCTTCAG+TGG + Chr5:7816674-7816693 MsG0580024658.01.T01:CDS 45.0%
!! ATAATAATAATTAAAATAAG+CGG - Chr5:7812637-7812656 None:intergenic 5.0%
AGGAGAGGGCTATCAATGAG+AGG + Chr5:7813094-7813113 MsG0580024658.01.T01:intron 50.0%
AGTGTCGTCAATAGGCTTGC+CGG + Chr5:7813993-7814012 MsG0580024658.01.T01:intron 50.0%
ATGGAAAGGCCACCATTAGG+AGG + Chr5:7813074-7813093 MsG0580024658.01.T01:intron 50.0%
ATGGATAGGCCACCATTAGG+AGG + Chr5:7813196-7813215 MsG0580024658.01.T01:intron 50.0%
CAAAGACAACTGTCGCGACA+AGG - Chr5:7816551-7816570 None:intergenic 50.0%
CCTAATGGTGGCCTATCCAT+AGG - Chr5:7813196-7813215 None:intergenic 50.0%
CCTAATGGTGGCCTTTCCAT+AGG - Chr5:7813074-7813093 None:intergenic 50.0%
CCTATGGAAAGGCCACCATT+AGG + Chr5:7813071-7813090 MsG0580024658.01.T01:intron 50.0%
CCTATGGATAGGCCACCATT+AGG + Chr5:7813193-7813212 MsG0580024658.01.T01:intron 50.0%
CGAAGAGTTCCCTTGCAGTT+TGG - Chr5:7816449-7816468 None:intergenic 50.0%
CTTGCTACTACGGAAGCAGT+TGG + Chr5:7812561-7812580 MsG0580024658.01.T01:CDS 50.0%
GCAACTCCTCTTGCAATTGC+AGG - Chr5:7815627-7815646 None:intergenic 50.0%
TGATAGCCCTCTCCTCCTAA+TGG - Chr5:7813089-7813108 None:intergenic 50.0%
TGCAATTGCAGGGCATAACC+AGG - Chr5:7815616-7815635 None:intergenic 50.0%
TGTCGCGACAGTTGTCTTTG+CGG + Chr5:7816551-7816570 MsG0580024658.01.T01:CDS 50.0%
TTTGTTGGATCAGGACCCGA+CGG + Chr5:7816013-7816032 MsG0580024658.01.T01:intron 50.0%
! TCTGTGTCACTCTTGGTGGT+AGG + Chr5:7813729-7813748 MsG0580024658.01.T01:intron 50.0%
!! GTTTCCCTTCTAGTTGGTGG+TGG + Chr5:7813603-7813622 MsG0580024658.01.T01:intron 50.0%
AAGGCCACCATTAGGAGGAG+AGG + Chr5:7813079-7813098 MsG0580024658.01.T01:intron 55.0%
AGGCCACCATTAGGAGGAGA+GGG + Chr5:7813080-7813099 MsG0580024658.01.T01:intron 55.0%
ATAGGGGCGGCTCCATCTAA+CGG - Chr5:7813056-7813075 None:intergenic 55.0%
ATAGGGGCGGCTCCATCTAA+TGG - Chr5:7813056-7813075 None:intergenic 55.0%
ATTAGATGGAGCCGCCCCTA+TGG + Chr5:7813055-7813074 MsG0580024658.01.T01:intron 55.0%
CTCGAGCAGCGTGGATAACT+CGG + Chr5:7812506-7812525 MsG0580024658.01.T01:CDS 55.0%
GGAGAGGGCTATCAACGAGA+TGG + Chr5:7813217-7813236 MsG0580024658.01.T01:intron 55.0%
GTCAATAGGCTTGCCGGACT+AGG + Chr5:7813999-7814018 MsG0580024658.01.T01:intron 55.0%
TAGCCCTCTCCTCCTAATGG+TGG - Chr5:7813086-7813105 None:intergenic 55.0%
TAGGCCACCATTAGGAGGAG+AGG + Chr5:7813201-7813220 MsG0580024658.01.T01:intron 55.0%
TAGGGGCGGCTCCATCTAAT+GGG - Chr5:7813055-7813074 None:intergenic 55.0%
!! GGATGTTCTAGTTCGTGCGC+CGG + Chr5:7814020-7814039 MsG0580024658.01.T01:intron 55.0%
AGGGGCGGCTCCATCTAATG+GGG - Chr5:7813054-7813073 None:intergenic 60.0%
ATGGAGCCGCCCCTATGGAA+AGG + Chr5:7813060-7813079 MsG0580024658.01.T01:intron 60.0%
ATGGAGCCGCCCCTATGGAT+AGG + Chr5:7813182-7813201 MsG0580024658.01.T01:intron 60.0%
GAATTGGGACTCGAGCAGCG+TGG + Chr5:7812497-7812516 MsG0580024658.01.T01:CDS 60.0%
GCAGCTTACACTGTCCCAGG+AGG + Chr5:7816573-7816592 MsG0580024658.01.T01:CDS 60.0%
GTTAGATGGAGCCGCCCCTA+TGG + Chr5:7813177-7813196 MsG0580024658.01.T01:intron 60.0%
TGGTGGCCTATCCATAGGGG+CGG - Chr5:7813191-7813210 None:intergenic 60.0%
TGGTGGCCTTTCCATAGGGG+CGG - Chr5:7813069-7813088 None:intergenic 60.0%
CGCGGTCGTTTGTGCCTCCT+GGG - Chr5:7816590-7816609 None:intergenic 65.0%
GCGGCAGCTTACACTGTCCC+AGG + Chr5:7816570-7816589 MsG0580024658.01.T01:CDS 65.0%
! CCAGGAGGCACAAACGACCG+CGG + Chr5:7816588-7816607 MsG0580024658.01.T01:CDS 65.0%
CCGCGGTCGTTTGTGCCTCC+TGG - Chr5:7816591-7816610 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 7812387 7817019 7812387 ID=MsG0580024658.01;Name=MsG0580024658.01
Chr5 mRNA 7812387 7817019 7812387 ID=MsG0580024658.01.T01;Parent=MsG0580024658.01;Name=MsG0580024658.01.T01;_AED=0.40;_eAED=0.41;_QI=0|0.25|0.2|0.8|0.75|1|5|0|480
Chr5 exon 7812387 7812612 7812387 ID=MsG0580024658.01.T01:exon:19362;Parent=MsG0580024658.01.T01
Chr5 exon 7814816 7814968 7814816 ID=MsG0580024658.01.T01:exon:19363;Parent=MsG0580024658.01.T01
Chr5 exon 7815052 7815098 7815052 ID=MsG0580024658.01.T01:exon:19364;Parent=MsG0580024658.01.T01
Chr5 exon 7815190 7815657 7815190 ID=MsG0580024658.01.T01:exon:19365;Parent=MsG0580024658.01.T01
Chr5 exon 7816471 7817019 7816471 ID=MsG0580024658.01.T01:exon:19366;Parent=MsG0580024658.01.T01
Chr5 CDS 7812387 7812612 7812387 ID=MsG0580024658.01.T01:cds;Parent=MsG0580024658.01.T01
Chr5 CDS 7814816 7814968 7814816 ID=MsG0580024658.01.T01:cds;Parent=MsG0580024658.01.T01
Chr5 CDS 7815052 7815098 7815052 ID=MsG0580024658.01.T01:cds;Parent=MsG0580024658.01.T01
Chr5 CDS 7815190 7815657 7815190 ID=MsG0580024658.01.T01:cds;Parent=MsG0580024658.01.T01
Chr5 CDS 7816471 7817019 7816471 ID=MsG0580024658.01.T01:cds;Parent=MsG0580024658.01.T01
Gene Sequence

>MsG0580024658.01.T01

ATGATTATAAGAGTTTTGATCGAAGTTTTGGATGAATTCGGAACACGCAGAAGCCATAAGTTACAGTTAAGCTGTTTGGAGAAAAGTGCTTACGGAGTACATCATGAGCTGAATTGGGACTCGAGCAGCGTGGATAACTCGGAAAAATGCCAAGATTGGATAGTTGATACTTTGCTTGCTACTACGGAAGCAGTTGGAGAGAAAATGTGGTTGATTCGACATAGCTTGCTTCCTGATTATCAAGATGATGCATATTACCTTCAAGATAATGATATTACTAGAAAAAGAGAAGATGTGGAAACTGGCAAAAAGGGCAAAAATGAACCACATCAAACTCAACGGAAGCAACCACCCCAAATTCATCATACAAAGCTCTCAGGTTTTTCATGGATGTGGTATACTATATGGAAGGCTCTTTCCAAAGGTAATGGAAGAGTATTAAAAAACTTTGGAAGAAAAAAAATGCATAACTTGTTAGCAAAGAATGACAATTCATGGAAACTTAGTTCAATAGCAATGGACAGAACAGTTTGTATAGGAATACAAAATGAGAATCAAGAAGAACAAGATGTTTCAAGCCACAAAGCTATTACTTATACACTGTTGCTTATGGCAGCTTGTAATGGAATCATAGAGATAGTAGAATTGGTAATTCGTTTTCATCCTCAATCAATTGAGCATGTCTGTGAAGATGAGCAGAACATACTGTACATGGCTGTGAAACATCACCAGTTAGAAATTTTCCGAATGTTGAAAAAACGGAAAATGGTGAGACATCTTGCTGGAAAAATAGACAACAAAAATAACACTGTTCTCCGCAATATTGCCGATTTTAAAGGAGGATCGCAACCTGGTTATGCCCTGCAATTGCAAGAGGAGTTGCATTGGTTTGAACAAAAGCACAAACAACTTCTGAAAGATGCTCGTGAATGGATAAAAGGGACAGCTCAGTCATGTTCTGCTGTAGCTGTCCTTGTCGCGACAGTTGTCTTTGCGGCAGCTTACACTGTCCCAGGAGGCACAAACGACCGCGGCTTACCAAGATTACTCTATCATCCTATATTTGTAGTGTTCATGGTCATGGATGTTGTAGCACTTGCAAGTTCATTGGCTTCAGTGGTTATGTTCCTTTCAATCCTCACATCACCTTGTGAGTTGTGGGATTTTAGGAGGTCTCTACCTAGGAAACTAATGGCAGGTTTTGCCTTCTTGTTCTTTTCTATGGCCACAACCATCTTGGTATTTACTGCAACAATTTTGGTGAACATCAAGTTAGATAAGAGCAAATGGAATTCAAGTTATAGTGCAGCATTTTTCCCTGTCAGCATTTTTGCAATGATGCAGTTCACTTTATATGTTGCCATGAAAGGATGTCTTATGGCACTCCTTAGGAGTCTTAAGAAGATTGTTCCTCAAGTTGATCAAAAGGAGCAAGAAAAATAG
Protein sequence

>MsG0580024658.01.T01

MIIRVLIEVLDEFGTRRSHKLQLSCLEKSAYGVHHELNWDSSSVDNSEKCQDWIVDTLLATTEAVGEKMWLIRHSLLPDYQDDAYYLQDNDITRKREDVETGKKGKNEPHQTQRKQPPQIHHTKLSGFSWMWYTIWKALSKGNGRVLKNFGRKKMHNLLAKNDNSWKLSSIAMDRTVCIGIQNENQEEQDVSSHKAITYTLLLMAACNGIIEIVELVIRFHPQSIEHVCEDEQNILYMAVKHHQLEIFRMLKKRKMVRHLAGKIDNKNNTVLRNIADFKGGSQPGYALQLQEELHWFEQKHKQLLKDAREWIKGTAQSCSAVAVLVATVVFAAAYTVPGGTNDRGLPRLLYHPIFVVFMVMDVVALASSLASVVMFLSILTSPCELWDFRRSLPRKLMAGFAFLFFSMATTILVFTATILVNIKLDKSKWNSSYSAAFFPVSIFAMMQFTLYVAMKGCLMALLRSLKKIVPQVDQKEQEK*