AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010443.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010443.01.T01 MTR_2g084410 76.493 268 24 5 1 253 15 258 2.14e-136 385
MsG0280010443.01.T01 MTR_2g084375 75.373 268 27 5 1 253 1 244 1.26e-134 380
MsG0280010443.01.T01 MTR_2g084425 77.711 166 19 2 3 168 220 367 1.59e-76 249
MsG0280010443.01.T01 MTR_2g084425 77.711 166 19 2 3 168 220 367 3.47e-76 249
MsG0280010443.01.T01 MTR_2g072760 70.423 142 32 1 3 144 4 135 1.56e-64 198
MsG0280010443.01.T01 MTR_2g072770 59.441 143 16 1 3 145 54 154 5.44e-50 161
MsG0280010443.01.T01 MTR_3g009890 76.786 56 13 0 198 253 156 211 2.52e-20 87.8
MsG0280010443.01.T01 MTR_1g062330 31.447 159 93 3 6 164 93 235 1.15e-17 82.4
MsG0280010443.01.T01 MTR_1g062330 31.447 159 93 3 6 164 93 235 1.21e-17 82.4
MsG0280010443.01.T01 MTR_7g102610 34.783 138 73 2 13 150 252 372 1.44e-17 82.4
MsG0280010443.01.T01 MTR_1g067750 32.558 129 69 2 2 130 385 495 3.52e-14 72.0
MsG0280010443.01.T01 MTR_1g067750 32.558 129 69 2 2 130 394 504 3.68e-14 72.0
MsG0280010443.01.T01 MTR_7g023750 34.127 126 65 2 5 130 397 504 9.90e-14 70.9
MsG0280010443.01.T01 MTR_7g023750 34.127 126 65 2 5 130 400 507 1.02e-13 70.9
MsG0280010443.01.T01 MTR_7g023750 34.127 126 65 2 5 130 354 461 1.06e-13 70.5
MsG0280010443.01.T01 MTR_4g063150 30.328 122 66 2 9 130 318 420 1.92e-12 66.6
MsG0280010443.01.T01 MTR_1g068930 30.556 144 80 3 9 152 254 377 2.02e-12 67.0
MsG0280010443.01.T01 MTR_1g068930 30.556 144 80 3 9 152 254 377 2.17e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010443.01.T01 AT2G27980 45.810 179 79 3 2 176 366 530 1.58e-40 149
MsG0280010443.01.T01 AT2G36720 29.167 192 115 3 13 199 264 439 1.16e-17 82.8
MsG0280010443.01.T01 AT2G36720 29.167 192 115 3 13 199 264 439 1.16e-17 82.8
MsG0280010443.01.T01 AT3G53680 35.246 122 61 2 9 130 182 285 6.26e-15 74.7
MsG0280010443.01.T01 AT3G53680 35.246 122 61 2 9 130 182 285 6.51e-15 74.3
MsG0280010443.01.T01 AT5G13660 33.333 138 73 3 2 138 391 510 4.02e-14 72.0
MsG0280010443.01.T01 AT5G13660 32.609 138 75 3 2 138 391 511 9.89e-14 70.9
MsG0280010443.01.T01 AT5G59830 31.967 122 64 2 9 130 290 392 2.24e-13 69.7
MsG0280010443.01.T01 AT5G59830 31.967 122 64 2 9 130 290 392 2.24e-13 69.7
MsG0280010443.01.T01 AT5G59830 31.967 122 64 2 9 130 290 392 2.24e-13 69.7

Find 61 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACTTGCAACTGGGATTC+TGG 0.280771 2:-69713507 MsG0280010443.01.T01:CDS
TAATCCGGAGGACGTTTATT+AGG 0.284155 2:+69713093 None:intergenic
CAAGGTGTGATCAAAGATTC+AGG 0.310758 2:-69713297 MsG0280010443.01.T01:CDS
TGATGTGTAGGCGCGTAAAC+CGG 0.346747 2:-69713334 MsG0280010443.01.T01:intron
AGAGGATGCGCTCTTGGTTT+CGG 0.354013 2:-69712736 MsG0280010443.01.T01:CDS
CAAACAATGAAGGGAGGTTC+TGG 0.363982 2:-69713557 None:intergenic
AGTGTCTGTGCTGGACTAAT+TGG 0.366436 2:+69711823 None:intergenic
CTGAAGGATCTACTTGCAAC+TGG 0.380559 2:-69713515 MsG0280010443.01.T01:CDS
TGGGAGTTGTAATGGGAATC+AGG 0.381607 2:-69713259 MsG0280010443.01.T01:CDS
ATGGGAATCAGGCAAGTAAA+TGG 0.387841 2:-69713248 MsG0280010443.01.T01:CDS
TGAAATCACCCAGGACCATT+TGG 0.397269 2:+69712986 None:intergenic
TGAGAATGGAAAACTCCTTC+GGG 0.415866 2:-69713061 MsG0280010443.01.T01:CDS
GATTATACTTACCTTGAGAA+TGG 0.429569 2:-69713075 MsG0280010443.01.T01:CDS
TGAAGGGAGGTTCTGGTAAG+AGG 0.433057 2:-69713550 MsG0280010443.01.T01:CDS
AAAAGAAGAGGATGCGCTCT+TGG 0.439362 2:-69712742 MsG0280010443.01.T01:CDS
ACTTCTTCCAAGAAAATAAG+AGG 0.454192 2:-69712661 MsG0280010443.01.T01:intron
TTGAGAATGGAAAACTCCTT+CGG 0.454228 2:-69713062 MsG0280010443.01.T01:CDS
GGCGCGTAAACCGGGAGAAA+AGG 0.458730 2:-69713325 MsG0280010443.01.T01:CDS
GATGTGTAGGCGCGTAAACC+GGG 0.460301 2:-69713333 MsG0280010443.01.T01:intron
GTCTCTTTCAACTCCATGCA+TGG 0.468548 2:+69712787 None:intergenic
ATATATAGTCACGGTGGACC+TGG 0.469482 2:-69711755 MsG0280010443.01.T01:CDS
ATCCAACGGAAAACTTGAAC+AGG 0.474582 2:+69713026 None:intergenic
TAAAGAGGTCCAAATGGTCC+TGG 0.476200 2:-69712995 MsG0280010443.01.T01:CDS
TCAGTGCATGGAACAATTGA+CGG 0.496206 2:-69711793 MsG0280010443.01.T01:CDS
GTTGGATACATTGGATAAAG+AGG 0.497086 2:-69713010 MsG0280010443.01.T01:CDS
TTCTCAAGGTAAGTATAATC+CGG 0.505601 2:+69713078 None:intergenic
ATTGGATAAAGAGGTCCAAA+TGG 0.516952 2:-69713001 MsG0280010443.01.T01:CDS
TAGTCCTAATAAACGTCCTC+CGG 0.530968 2:-69713097 MsG0280010443.01.T01:CDS
AATATCTGTTTCAACTGCAG+AGG 0.560462 2:-69712949 MsG0280010443.01.T01:intron
GAGGTTTCTTGTCAAGCTGA+AGG 0.562578 2:-69713531 MsG0280010443.01.T01:CDS
ATTGAAAGTGAGATATGTCA+AGG 0.573844 2:-69713480 MsG0280010443.01.T01:CDS
GAAGAACCGAGTGTCTGTGC+TGG 0.576107 2:+69711814 None:intergenic
TCTTGTGACCAAACAATGAA+GGG 0.576525 2:-69713566 None:intergenic
CAGTGCATGGAACAATTGAC+GGG 0.580953 2:-69711792 MsG0280010443.01.T01:CDS
GAGTTGAAAGAGACTTCTGC+AGG 0.582564 2:-69712778 MsG0280010443.01.T01:CDS
TATATAGTCACGGTGGACCT+GGG 0.588733 2:-69711754 MsG0280010443.01.T01:CDS
CAGGCAAGTAAATGGAGGGA+TGG 0.589865 2:-69713240 MsG0280010443.01.T01:CDS
GAGATATGTCAAGGGACAGA+AGG 0.592127 2:-69713471 MsG0280010443.01.T01:intron
ACTAGTATGCAATCCATGCA+TGG 0.592882 2:-69712800 MsG0280010443.01.T01:CDS
ACTTCTTCCAAGAAAAGAAG+AGG 0.593684 2:-69712754 MsG0280010443.01.T01:CDS
CTTGCAACTGGGATTCTGGA+GGG 0.595490 2:-69713503 MsG0280010443.01.T01:CDS
AAAGAGGTCCAAATGGTCCT+GGG 0.599169 2:-69712994 MsG0280010443.01.T01:CDS
CTGGGTTCTGAACAGCAGAA+AGG 0.599615 2:-69711736 MsG0280010443.01.T01:CDS
CTTTCTGCTGTTCAGAACCC+AGG 0.604928 2:+69711737 None:intergenic
ATTGACGGGAAATTTGATGA+CGG 0.626327 2:-69711778 MsG0280010443.01.T01:CDS
ACACTCGGTTCTTCAGTGCA+TGG 0.628634 2:-69711805 MsG0280010443.01.T01:CDS
GGAATCAGGCAAGTAAATGG+AGG 0.632905 2:-69713245 MsG0280010443.01.T01:CDS
ATTAGTCCAGCACAGACACT+CGG 0.635032 2:-69711820 MsG0280010443.01.T01:CDS
CCGGGAGAAAAGGATTTGCA+AGG 0.635552 2:-69713315 MsG0280010443.01.T01:CDS
TGAAGGATCTACTTGCAACT+GGG 0.637645 2:-69713514 MsG0280010443.01.T01:CDS
GTCAATTACTGAATCTAACA+AGG 0.638536 2:-69712833 MsG0280010443.01.T01:CDS
GAATCAGGCAAGTAAATGGA+GGG 0.643553 2:-69713244 MsG0280010443.01.T01:CDS
ACTTGCAACTGGGATTCTGG+AGG 0.645874 2:-69713504 MsG0280010443.01.T01:CDS
TCTTTATCCAATGTATCCAA+CGG 0.651966 2:+69713012 None:intergenic
TTGAAAGTGAGATATGTCAA+GGG 0.671458 2:-69713479 MsG0280010443.01.T01:CDS
TGATGACGGATATATAGTCA+CGG 0.676944 2:-69711764 MsG0280010443.01.T01:CDS
TGTGACCAAACAATGAAGGG+AGG 0.679689 2:-69713563 None:intergenic
AGGCATTCATGACATCCCGA+AGG 0.693693 2:+69713046 None:intergenic
TCAAGGTAAGTATAATCCGG+AGG 0.695456 2:+69713081 None:intergenic
TCTGCATTGTGAAATCACCC+AGG 0.713370 2:+69712977 None:intergenic
TGACGGATATATAGTCACGG+TGG 0.799576 2:-69711761 MsG0280010443.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTTTTTTTTTCTTTCTTG+TGG - Chr2:69711880-69711899 MsG0280010443.01.T01:intron 20.0%
!!! GTATATTGTTTTGAACTTTT+TGG - Chr2:69711819-69711838 MsG0280010443.01.T01:CDS 20.0%
!!! TATTATTTTTTTGCTTGTGT+GGG - Chr2:69712052-69712071 MsG0280010443.01.T01:intron 20.0%
!!! TCATTTCTTTAATTTAGACT+TGG - Chr2:69712926-69712945 MsG0280010443.01.T01:intron 20.0%
!!! TCTGATTTTTTTTTTGAAAC+TGG - Chr2:69712870-69712889 MsG0280010443.01.T01:intron 20.0%
!!! TTATTATTTTTTTGCTTGTG+TGG - Chr2:69712051-69712070 MsG0280010443.01.T01:intron 20.0%
! AACAAAGTTCTTATCTATGT+TGG - Chr2:69713362-69713381 MsG0280010443.01.T01:intron 25.0%
! AGAAATGAATCATCTATGAA+TGG + Chr2:69712914-69712933 None:intergenic 25.0%
! ATTATGACATCGTTTAATCT+GGG - Chr2:69713023-69713042 MsG0280010443.01.T01:CDS 25.0%
! TCAAAAAATAAGAGAGAAGA+AGG - Chr2:69712556-69712575 MsG0280010443.01.T01:intron 25.0%
! TTGTATGTTTACAAGTTTCT+AGG + Chr2:69712643-69712662 None:intergenic 25.0%
!! TGAAATATTTTTCTGTGATG+TGG - Chr2:69712780-69712799 MsG0280010443.01.T01:CDS 25.0%
!!! AATTTTGATGAACTGTTTGT+AGG - Chr2:69712412-69712431 MsG0280010443.01.T01:intron 25.0%
!!! ATTTTGATGAACTGTTTGTA+GGG - Chr2:69712413-69712432 MsG0280010443.01.T01:intron 25.0%
!!! GTTTTGAACTTTTTGGATTT+TGG - Chr2:69711826-69711845 MsG0280010443.01.T01:CDS 25.0%
!!! TGTAATACCTCTTATTTTCT+TGG + Chr2:69712617-69712636 None:intergenic 25.0%
ACTTCTTCCAAGAAAATAAG+AGG - Chr2:69712607-69712626 MsG0280010443.01.T01:intron 30.0%
ATTGAAAGTGAGATATGTCA+AGG - Chr2:69711788-69711807 MsG0280010443.01.T01:CDS 30.0%
CATTATGACATCGTTTAATC+TGG - Chr2:69713022-69713041 MsG0280010443.01.T01:CDS 30.0%
GATTATACTTACCTTGAGAA+TGG - Chr2:69712193-69712212 MsG0280010443.01.T01:intron 30.0%
GGACGTATAGTCAATATTAT+TGG + Chr2:69712686-69712705 None:intergenic 30.0%
GTCAATTACTGAATCTAACA+AGG - Chr2:69712435-69712454 MsG0280010443.01.T01:intron 30.0%
GTGAAATTGTGAATGATGTT+AGG - Chr2:69711857-69711876 MsG0280010443.01.T01:intron 30.0%
TCTTTATCCAATGTATCCAA+CGG + Chr2:69712259-69712278 None:intergenic 30.0%
TTCTCAAGGTAAGTATAATC+CGG + Chr2:69712193-69712212 None:intergenic 30.0%
TTGAAAGTGAGATATGTCAA+GGG - Chr2:69711789-69711808 MsG0280010443.01.T01:CDS 30.0%
TTTATTCGTGAATGATGTGT+AGG - Chr2:69711922-69711941 MsG0280010443.01.T01:intron 30.0%
!!! TGTTGTTTTTTGTTGAGAGT+AGG - Chr2:69712114-69712133 MsG0280010443.01.T01:intron 30.0%
!!! TTCTGCAGAAGTAGTTTTTT+CGG + Chr2:69712587-69712606 None:intergenic 30.0%
AAACTCTCCTAGAGAACTAA+TGG - Chr2:69713194-69713213 MsG0280010443.01.T01:intron 35.0%
AATAGTCACCTATGTGCTAA+TGG + Chr2:69713108-69713127 None:intergenic 35.0%
AATATCTGTTTCAACTGCAG+AGG - Chr2:69712319-69712338 MsG0280010443.01.T01:intron 35.0%
AATTACATAGTGTCACAGCT+AGG + Chr2:69712368-69712387 None:intergenic 35.0%
ACTTCTTCCAAGAAAAGAAG+AGG - Chr2:69712514-69712533 MsG0280010443.01.T01:intron 35.0%
ATGTATACCCTAACTCATGA+TGG + Chr2:69712707-69712726 None:intergenic 35.0%
ATTGACGGGAAATTTGATGA+CGG - Chr2:69713490-69713509 MsG0280010443.01.T01:CDS 35.0%
ATTGGATAAAGAGGTCCAAA+TGG - Chr2:69712267-69712286 MsG0280010443.01.T01:intron 35.0%
GTGATGTGGAAATAGAAGTA+AGG - Chr2:69712794-69712813 MsG0280010443.01.T01:CDS 35.0%
GTTGGATACATTGGATAAAG+AGG - Chr2:69712258-69712277 MsG0280010443.01.T01:intron 35.0%
TAGCACATAGGTGACTATTT+GGG - Chr2:69713109-69713128 MsG0280010443.01.T01:CDS 35.0%
TATACGTCCATCATGAGTTA+GGG - Chr2:69712697-69712716 MsG0280010443.01.T01:CDS 35.0%
TCTATCATAAGTTGTGTCGA+TGG + Chr2:69713001-69713020 None:intergenic 35.0%
TTAGCACATAGGTGACTATT+TGG - Chr2:69713108-69713127 MsG0280010443.01.T01:CDS 35.0%
TTGAGAATGGAAAACTCCTT+CGG - Chr2:69712206-69712225 MsG0280010443.01.T01:intron 35.0%
! AAGTTTTCCGTTGGATACAT+TGG - Chr2:69712249-69712268 MsG0280010443.01.T01:intron 35.0%
! CAGGAATTTTGTGCTTTTGT+GGG - Chr2:69711990-69712009 MsG0280010443.01.T01:intron 35.0%
! TCAGGAATTTTGTGCTTTTG+TGG - Chr2:69711989-69712008 MsG0280010443.01.T01:intron 35.0%
!! ATCGAAAGCTTTATTGCACT+AGG + Chr2:69713061-69713080 None:intergenic 35.0%
!! GAACTTTTTGGATTTTGGTC+TGG - Chr2:69711831-69711850 MsG0280010443.01.T01:CDS 35.0%
!! TGATGACGGATATATAGTCA+CGG - Chr2:69713504-69713523 MsG0280010443.01.T01:CDS 35.0%
ACTAGTATGCAATCCATGCA+TGG - Chr2:69712468-69712487 MsG0280010443.01.T01:intron 40.0%
ATCCAACGGAAAACTTGAAC+AGG + Chr2:69712245-69712264 None:intergenic 40.0%
ATGGGAATCAGGCAAGTAAA+TGG - Chr2:69712020-69712039 MsG0280010443.01.T01:intron 40.0%
ATGTACTGCCATTAGCACAT+AGG - Chr2:69713097-69713116 MsG0280010443.01.T01:CDS 40.0%
CAAGGTGTGATCAAAGATTC+AGG - Chr2:69711971-69711990 MsG0280010443.01.T01:intron 40.0%
CTATACGTCCATCATGAGTT+AGG - Chr2:69712696-69712715 MsG0280010443.01.T01:CDS 40.0%
GAATCAGGCAAGTAAATGGA+GGG - Chr2:69712024-69712043 MsG0280010443.01.T01:intron 40.0%
GCATGCACCTCAAAAACATT+CGG + Chr2:69712148-69712167 None:intergenic 40.0%
TAATCCGGAGGACGTTTATT+AGG + Chr2:69712178-69712197 None:intergenic 40.0%
TAGTCCTAATAAACGTCCTC+CGG - Chr2:69712171-69712190 MsG0280010443.01.T01:intron 40.0%
TCAAGGTAAGTATAATCCGG+AGG + Chr2:69712190-69712209 None:intergenic 40.0%
TCAGTGCATGGAACAATTGA+CGG - Chr2:69713475-69713494 MsG0280010443.01.T01:CDS 40.0%
TGAAGGATCTACTTGCAACT+GGG - Chr2:69711754-69711773 MsG0280010443.01.T01:CDS 40.0%
TGACTATTTGGGAGAGCTTA+TGG - Chr2:69713120-69713139 MsG0280010443.01.T01:CDS 40.0%
TGAGAATGGAAAACTCCTTC+GGG - Chr2:69712207-69712226 MsG0280010443.01.T01:intron 40.0%
TTGGGAGAGCTTATGGATAT+TGG - Chr2:69713127-69713146 MsG0280010443.01.T01:CDS 40.0%
! GAAGGAGTTTTCCATTCTCA+AGG + Chr2:69712207-69712226 None:intergenic 40.0%
! GCTGTTTCCATTAGTTCTCT+AGG + Chr2:69713204-69713223 None:intergenic 40.0%
! GCTTTTGTGGGAGTTGTAAT+GGG - Chr2:69712002-69712021 MsG0280010443.01.T01:intron 40.0%
! TGCTTTTGTGGGAGTTGTAA+TGG - Chr2:69712001-69712020 MsG0280010443.01.T01:intron 40.0%
!!! AATGTTTTTGAGGTGCATGC+TGG - Chr2:69712148-69712167 MsG0280010443.01.T01:intron 40.0%
!!! GCAGAAGTAGTTTTTTCGGA+AGG + Chr2:69712583-69712602 None:intergenic 40.0%
AAAAGAAGAGGATGCGCTCT+TGG - Chr2:69712526-69712545 MsG0280010443.01.T01:intron 45.0%
AAAGAGGTCCAAATGGTCCT+GGG - Chr2:69712274-69712293 MsG0280010443.01.T01:intron 45.0%
AGTGTCTGTGCTGGACTAAT+TGG + Chr2:69713448-69713467 None:intergenic 45.0%
ATATATAGTCACGGTGGACC+TGG - Chr2:69713513-69713532 MsG0280010443.01.T01:CDS 45.0%
ATTAGTCCAGCACAGACACT+CGG - Chr2:69713448-69713467 MsG0280010443.01.T01:intron 45.0%
CAGTGCATGGAACAATTGAC+GGG - Chr2:69713476-69713495 MsG0280010443.01.T01:CDS 45.0%
CTGAAGGATCTACTTGCAAC+TGG - Chr2:69711753-69711772 MsG0280010443.01.T01:CDS 45.0%
GAGATATGTCAAGGGACAGA+AGG - Chr2:69711797-69711816 MsG0280010443.01.T01:CDS 45.0%
GAGGTTTCTTGTCAAGCTGA+AGG - Chr2:69711737-69711756 MsG0280010443.01.T01:CDS 45.0%
GAGTTGAAAGAGACTTCTGC+AGG - Chr2:69712490-69712509 MsG0280010443.01.T01:intron 45.0%
GGAATCAGGCAAGTAAATGG+AGG - Chr2:69712023-69712042 MsG0280010443.01.T01:intron 45.0%
GTCTCTTTCAACTCCATGCA+TGG + Chr2:69712484-69712503 None:intergenic 45.0%
GTGTGGGTTTAGCATCTTGT+AGG - Chr2:69712068-69712087 MsG0280010443.01.T01:intron 45.0%
TAAAGAGGTCCAAATGGTCC+TGG - Chr2:69712273-69712292 MsG0280010443.01.T01:intron 45.0%
TATATAGTCACGGTGGACCT+GGG - Chr2:69713514-69713533 MsG0280010443.01.T01:CDS 45.0%
TCTACTTGCAACTGGGATTC+TGG - Chr2:69711761-69711780 MsG0280010443.01.T01:CDS 45.0%
TCTGCATTGTGAAATCACCC+AGG + Chr2:69712294-69712313 None:intergenic 45.0%
TGAAATCACCCAGGACCATT+TGG + Chr2:69712285-69712304 None:intergenic 45.0%
! AGCGCATCCTCTTCTTTTCT+TGG + Chr2:69712524-69712543 None:intergenic 45.0%
! CCTTGCAAATCCTTTTCTCC+CGG + Chr2:69711956-69711975 None:intergenic 45.0%
! TGACGGATATATAGTCACGG+TGG - Chr2:69713507-69713526 MsG0280010443.01.T01:CDS 45.0%
! TGGGAGTTGTAATGGGAATC+AGG - Chr2:69712009-69712028 MsG0280010443.01.T01:intron 45.0%
!! TGCCTGTTCAAGTTTTCCGT+TGG - Chr2:69712240-69712259 MsG0280010443.01.T01:intron 45.0%
!! TGTCTCGCCGAATGTTTTTG+AGG - Chr2:69712138-69712157 MsG0280010443.01.T01:intron 45.0%
ACACTCGGTTCTTCAGTGCA+TGG - Chr2:69713463-69713482 MsG0280010443.01.T01:intron 50.0%
ACTTGCAACTGGGATTCTGG+AGG - Chr2:69711764-69711783 MsG0280010443.01.T01:CDS 50.0%
AGAGGATGCGCTCTTGGTTT+CGG - Chr2:69712532-69712551 MsG0280010443.01.T01:intron 50.0%
AGGCATTCATGACATCCCGA+AGG + Chr2:69712225-69712244 None:intergenic 50.0%
CAGGCAAGTAAATGGAGGGA+TGG - Chr2:69712028-69712047 MsG0280010443.01.T01:intron 50.0%
CCGGGAGAAAAGGATTTGCA+AGG - Chr2:69711953-69711972 MsG0280010443.01.T01:intron 50.0%
CTTGCAACTGGGATTCTGGA+GGG - Chr2:69711765-69711784 MsG0280010443.01.T01:CDS 50.0%
CTTTCTGCTGTTCAGAACCC+AGG + Chr2:69713534-69713553 None:intergenic 50.0%
TGATGTGTAGGCGCGTAAAC+CGG - Chr2:69711934-69711953 MsG0280010443.01.T01:intron 50.0%
! TGAAGGGAGGTTCTGGTAAG+AGG - Chr2:69711718-69711737 MsG0280010443.01.T01:CDS 50.0%
!! CTGGGTTCTGAACAGCAGAA+AGG - Chr2:69713532-69713551 MsG0280010443.01.T01:CDS 50.0%
GAAGAACCGAGTGTCTGTGC+TGG + Chr2:69713457-69713476 None:intergenic 55.0%
GATGTGTAGGCGCGTAAACC+GGG - Chr2:69711935-69711954 MsG0280010443.01.T01:intron 55.0%
GGCGCGTAAACCGGGAGAAA+AGG - Chr2:69711943-69711962 MsG0280010443.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 69711717 69713573 69711717 ID=MsG0280010443.01;Name=MsG0280010443.01
Chr2 mRNA 69711717 69713573 69711717 ID=MsG0280010443.01.T01;Parent=MsG0280010443.01;Name=MsG0280010443.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|5|0|253
Chr2 exon 69713472 69713573 69713472 ID=MsG0280010443.01.T01:exon:9802;Parent=MsG0280010443.01.T01
Chr2 exon 69713221 69713346 69713221 ID=MsG0280010443.01.T01:exon:9801;Parent=MsG0280010443.01.T01
Chr2 exon 69712950 69713154 69712950 ID=MsG0280010443.01.T01:exon:9800;Parent=MsG0280010443.01.T01
Chr2 exon 69712662 69712856 69712662 ID=MsG0280010443.01.T01:exon:9799;Parent=MsG0280010443.01.T01
Chr2 exon 69711717 69711850 69711717 ID=MsG0280010443.01.T01:exon:9798;Parent=MsG0280010443.01.T01
Chr2 CDS 69713472 69713573 69713472 ID=MsG0280010443.01.T01:cds;Parent=MsG0280010443.01.T01
Chr2 CDS 69713221 69713346 69713221 ID=MsG0280010443.01.T01:cds;Parent=MsG0280010443.01.T01
Chr2 CDS 69712950 69713154 69712950 ID=MsG0280010443.01.T01:cds;Parent=MsG0280010443.01.T01
Chr2 CDS 69712662 69712856 69712662 ID=MsG0280010443.01.T01:cds;Parent=MsG0280010443.01.T01
Chr2 CDS 69711717 69711850 69711717 ID=MsG0280010443.01.T01:cds;Parent=MsG0280010443.01.T01
Gene Sequence

>MsG0280010443.01.T01

ATGAAGGGAGGTTCTGGTAAGAGGTTTCTTGTCAAGCTGAAGGATCTACTTGCAACTGGGATTCTGGAGGGATTGAAAGTGAGATATGTCAAGGGACAGAAGGCGCGTAAACCGGGAGAAAAGGATTTGCAAGGTGTGATCAAAGATTCAGGAATTTTGTGCTTTTGTGGGAGTTGTAATGGGAATCAGGCAAGTAAATGGAGGGATGGTTATTATTTTTTTGCTTGTGTTGTCTCGCCGAATGTTTTTGAGGTGCATGCTGGTAGTCCTAATAAACGTCCTCCGGATTATACTTACCTTGAGAATGGAAAACTCCTTCGGGATGTCATGAATGCCTGTTCAAGTTTTCCGTTGGATACATTGGATAAAGAGGTCCAAATGGTCCTGGGTGATTTCACAATGCAGAATTCTAATATCTGTTTCAACTGCAGAGGGTCAATTACTGAATCTAACAAGGATCAGTCAAAACTAGTATGCAATCCATGCATGGAGTTGAAAGAGACTTCTGCAGGAACTTCTTCCAAGAAAAGAAGAGGATGCGCTCTTGGTTTCGGATCAAAAAATAAGAGAGAAGAAGGACCTTCCGAAAAAACTACTTCTGCAGAAACTTCTTCCAAGAAAATAAGAGTTAGTCCAATTAGTCCAGCACAGACACTCGGTTCTTCAGTGCATGGAACAATTGACGGGAAATTTGATGACGGATATATAGTCACGGTGGACCTGGGTTCTGAACAGCAGAAAGGTGTCTTGTATCATGTTTGA

Protein sequence

>MsG0280010443.01.T01

MKGGSGKRFLVKLKDLLATGILEGLKVRYVKGQKARKPGEKDLQGVIKDSGILCFCGSCNGNQASKWRDGYYFFACVVSPNVFEVHAGSPNKRPPDYTYLENGKLLRDVMNACSSFPLDTLDKEVQMVLGDFTMQNSNICFNCRGSITESNKDQSKLVCNPCMELKETSAGTSSKKRRGCALGFGSKNKREEGPSEKTTSAETSSKKIRVSPISPAQTLGSSVHGTIDGKFDDGYIVTVDLGSEQQKGVLYHV*