AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025771.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025771.01.T01 MTR_5g034250 44.444 108 43 2 72 167 64 166 1.81e-17 77.4
MsG0580025771.01.T01 MTR_5g034250 44.444 108 43 2 72 167 86 188 2.44e-17 77.4
MsG0580025771.01.T01 MTR_8g064630 43.519 108 44 2 72 167 64 166 4.25e-17 76.3
MsG0580025771.01.T01 MTR_8g064630 93.333 30 2 0 138 167 62 91 4.49e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 48 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCCCAGCCATTTCTCTCTT+TGG 0.199401 5:-23927065 None:intergenic
GTGGAGAATATTGTAGTTAT+TGG 0.233327 5:+23934014 MsG0580025771.01.T01:CDS
CTTGCGGTGGTCCCATCATC+TGG 0.251001 5:-23934077 None:intergenic
AATATGCGGTCTACATTTAA+AGG 0.281282 5:+23932712 MsG0580025771.01.T01:CDS
CGCCCCTGCTCCCGAATACT+TGG 0.306885 5:-23932682 None:intergenic
CAGCTGCTGTGGAGGCATAA+AGG 0.320529 5:+23934040 MsG0580025771.01.T01:CDS
AGCTGCTGTGGAGGCATAAA+GGG 0.327110 5:+23934041 MsG0580025771.01.T01:CDS
TGACCTTAGGGCTCTGGCTT+TGG 0.327481 5:-23931625 None:intergenic
TGTTTGGCAGACCAAGTATT+CGG 0.349236 5:+23932671 MsG0580025771.01.T01:intron
GTTTGGCAGACCAAGTATTC+GGG 0.408757 5:+23932672 MsG0580025771.01.T01:intron
CCGTCAGCTCCTTGATCTTC+CGG 0.433369 5:-23930788 None:intergenic
AATGTAGACCGCATATTCAA+TGG 0.438755 5:-23932706 None:intergenic
GCTGACGGCGGAGTTATTAG+AGG 0.466068 5:+23930803 MsG0580025771.01.T01:CDS
CTCATGTCTATCCCAGATGA+TGG 0.470494 5:+23934065 MsG0580025771.01.T01:CDS
GCAAGTTCACCGTACAGCTC+AGG 0.475420 5:-23931603 None:intergenic
CAGACCAAGTATTCGGGAGC+AGG 0.489426 5:+23932678 MsG0580025771.01.T01:intron
TTCAGGGAGAAAGCTGAGCT+TGG 0.509469 5:+23930754 MsG0580025771.01.T01:intron
AATAGCTGACCTTAGGGCTC+TGG 0.511436 5:-23931631 None:intergenic
ACATCGCCGCCGGAAGATCA+AGG 0.515003 5:+23930779 MsG0580025771.01.T01:CDS
AAGAAGACCAAAGAGAGAAA+TGG 0.518879 5:+23927058 MsG0580025771.01.T01:CDS
GACCAAAGAGAGAAATGGCT+GGG 0.529954 5:+23927063 MsG0580025771.01.T01:CDS
AGACCAAGTATTCGGGAGCA+GGG 0.545106 5:+23932679 MsG0580025771.01.T01:intron
TCGAAGAATCCTGAGCTGTA+CGG 0.548960 5:+23931594 MsG0580025771.01.T01:CDS
CAAGTATTCGGGAGCAGGGG+CGG 0.551194 5:+23932683 MsG0580025771.01.T01:CDS
GAGCTTGGTGACATCGCCGC+CGG 0.557331 5:+23930769 MsG0580025771.01.T01:CDS
TTGCGGTGGTCCCATCATCT+GGG 0.562712 5:-23934076 None:intergenic
GCTCAGGATTCTTCGAAAAG+AGG 0.563761 5:-23931587 None:intergenic
TTGCCAAAGCCAGAGCCCTA+AGG 0.578958 5:+23931622 MsG0580025771.01.T01:CDS
AGACCAAAGAGAGAAATGGC+TGG 0.579000 5:+23927062 MsG0580025771.01.T01:CDS
ATTGGACACAGCTGCTGTGG+AGG 0.590942 5:+23934032 MsG0580025771.01.T01:CDS
TCATGTCTATCCCAGATGAT+GGG 0.593762 5:+23934066 MsG0580025771.01.T01:CDS
GACCAAGTATTCGGGAGCAG+GGG 0.598369 5:+23932680 MsG0580025771.01.T01:intron
TGATGGGACCACCGCAAGGT+AGG 0.599292 5:+23934082 MsG0580025771.01.T01:CDS
GTTATTGGACACAGCTGCTG+TGG 0.606630 5:+23934029 MsG0580025771.01.T01:CDS
ACTGTCTGGAATATGGCCAC+TGG 0.606696 5:+23926775 None:intergenic
CCGGAAGATCAAGGAGCTGA+CGG 0.630568 5:+23930788 MsG0580025771.01.T01:CDS
CAGATGATGGGACCACCGCA+AGG 0.633320 5:+23934078 MsG0580025771.01.T01:CDS
TTGTGATATATTCACACCAG+TGG 0.635399 5:-23926791 None:intergenic
AGGGGCGGCCATTGAATATG+CGG 0.637261 5:+23932698 MsG0580025771.01.T01:CDS
TAATAAAACCTACCTTGCGG+TGG 0.643471 5:-23934090 None:intergenic
TTGCACGAACAAGATTGTCT+CGG 0.644917 5:+23927112 MsG0580025771.01.T01:CDS
GCGGAGTTATTAGAGGCCAA+CGG 0.657351 5:+23930810 MsG0580025771.01.T01:CDS
GCTGCTGTGGAGGCATAAAG+GGG 0.658582 5:+23934042 MsG0580025771.01.T01:CDS
ACCAAAGAGAGAAATGGCTG+GGG 0.659164 5:+23927064 MsG0580025771.01.T01:CDS
TAATAATAAAACCTACCTTG+CGG 0.677199 5:-23934093 None:intergenic
GAAGATCAAGGAGCTGACGG+CGG 0.696175 5:+23930791 MsG0580025771.01.T01:CDS
TCAGCTCCTTGATCTTCCGG+CGG 0.728472 5:-23930785 None:intergenic
TGAATATATCACAAACACAG+CGG 0.795811 5:+23926800 MsG0580025771.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATATTTTTATATATATA+CGG - Chr5:23928585-23928604 None:intergenic 0.0%
!!! TATATTATTTTATTATTATA+TGG + Chr5:23932786-23932805 MsG0580025771.01.T01:intron 0.0%
!!! TTTATATTAATTTTTTTTTT+GGG - Chr5:23929098-23929117 None:intergenic 0.0%
!! AAAAAAAAATAATAATTGAG+TGG - Chr5:23927643-23927662 None:intergenic 10.0%
!! AAAATTATAAAATAAAAAGG+CGG - Chr5:23928025-23928044 None:intergenic 10.0%
!! AATAATATAGATAAAGTATA+TGG - Chr5:23932775-23932794 None:intergenic 10.0%
!! ATTAAGAAAAAGTAAATAAA+GGG + Chr5:23933034-23933053 MsG0580025771.01.T01:intron 10.0%
!! ATTTGTCAATTAAAAAATTT+AGG - Chr5:23927324-23927343 None:intergenic 10.0%
!! GTGTATATTAATTTAATTAA+TGG + Chr5:23928144-23928163 MsG0580025771.01.T01:intron 10.0%
!! TATGTTTATCATTTAAAAAA+AGG + Chr5:23929593-23929612 MsG0580025771.01.T01:intron 10.0%
!! TATTAAGAAAAAGTAAATAA+AGG + Chr5:23933033-23933052 MsG0580025771.01.T01:intron 10.0%
!!! AAAATTAAAAAGCATATATT+GGG - Chr5:23928507-23928526 None:intergenic 10.0%
!!! ATTATTTTATTATTATATGG+TGG + Chr5:23932789-23932808 MsG0580025771.01.T01:intron 10.0%
!!! CCTTTTTATTTTATAATTTT+GGG + Chr5:23928025-23928044 MsG0580025771.01.T01:intron 10.0%
!!! TAAAATTAAAAAGCATATAT+TGG - Chr5:23928508-23928527 None:intergenic 10.0%
!!! TAAATATATTACACTTTTAT+AGG - Chr5:23932146-23932165 None:intergenic 10.0%
!!! TATTTTCTTATAAATAAGAT+CGG + Chr5:23931279-23931298 MsG0580025771.01.T01:intron 10.0%
!!! TTAATCTTTTTATATATTTG+GGG - Chr5:23929348-23929367 None:intergenic 10.0%
!!! TTATTACTATATTATTTTCA+GGG + Chr5:23930738-23930757 MsG0580025771.01.T01:intron 10.0%
!!! TTATTTTATTATTATATGGT+GGG + Chr5:23932790-23932809 MsG0580025771.01.T01:intron 10.0%
!! AAAAAAAAAAAGAATAACTC+TGG + Chr5:23929197-23929216 MsG0580025771.01.T01:intron 15.0%
!! ATAAAAAAGTAAAATGCTAT+TGG - Chr5:23933966-23933985 None:intergenic 15.0%
!! ATAATATAGTAATAACGAAA+CGG - Chr5:23930733-23930752 None:intergenic 15.0%
!! ATAGGTATATTATATATCAA+AGG - Chr5:23931812-23931831 None:intergenic 15.0%
!! ATTTAAAAACAAAAACTTAG+TGG - Chr5:23929634-23929653 None:intergenic 15.0%
!! CCCAAAATTATAAAATAAAA+AGG - Chr5:23928028-23928047 None:intergenic 15.0%
!! GATATATTTGGTTAAAAAAT+TGG - Chr5:23931242-23931261 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + Chr5:23933098-23933117 MsG0580025771.01.T01:intron 15.0%
!! TCAACAAAAATAGATATATT+TGG - Chr5:23931254-23931273 None:intergenic 15.0%
!! TTAAGAAAAAGTAAATAAAG+GGG + Chr5:23933035-23933054 MsG0580025771.01.T01:intron 15.0%
!! TTTAAATAATTAACGTAAAG+TGG + Chr5:23929369-23929388 MsG0580025771.01.T01:intron 15.0%
!!! AAACTTAAAACTGTTTTATT+AGG - Chr5:23932449-23932468 None:intergenic 15.0%
!!! AATGACATGTTAATTTTTTT+AGG + Chr5:23929442-23929461 MsG0580025771.01.T01:intron 15.0%
!!! AGAAGAATGATTATTTATTT+TGG - Chr5:23927974-23927993 None:intergenic 15.0%
!!! AGCATTTTACTTTTTTATTT+TGG + Chr5:23933968-23933987 MsG0580025771.01.T01:CDS 15.0%
!!! ATTTATATAAACACATTTTC+AGG - Chr5:23933775-23933794 None:intergenic 15.0%
!!! CGTTTTTTTTTTTTAAAAGA+TGG + Chr5:23928445-23928464 MsG0580025771.01.T01:intron 15.0%
!!! GCCTTTTTATTTTATAATTT+TGG + Chr5:23928024-23928043 MsG0580025771.01.T01:intron 15.0%
!!! GTATAGATATTTTTCATTAT+AGG - Chr5:23931830-23931849 None:intergenic 15.0%
!!! GTTATTACTATATTATTTTC+AGG + Chr5:23930737-23930756 MsG0580025771.01.T01:intron 15.0%
!!! TAAATAGAACCAATTAATTT+TGG - Chr5:23926986-23927005 None:intergenic 15.0%
!! AAAAAATAATAATTGAGTGG+AGG - Chr5:23927640-23927659 None:intergenic 20.0%
!! AAAAATAATAATTGAGTGGA+GGG - Chr5:23927639-23927658 None:intergenic 20.0%
!! AAAACTGTGTCAATTAAATT+GGG - Chr5:23933001-23933020 None:intergenic 20.0%
!! ATCAATATGTGTATCTTTAT+AGG + Chr5:23933348-23933367 MsG0580025771.01.T01:intron 20.0%
!! ATTCTATTGCATTATTTGTT+GGG + Chr5:23932864-23932883 MsG0580025771.01.T01:intron 20.0%
!! ATTGATTATTGAGTCAAAAA+GGG - Chr5:23929244-23929263 None:intergenic 20.0%
!! TACATTATTTCCTATGTAAT+GGG - Chr5:23927614-23927633 None:intergenic 20.0%
!! TATCAAAGATAAAATGATGT+TGG - Chr5:23932416-23932435 None:intergenic 20.0%
!! TATTCTATTGCATTATTTGT+TGG + Chr5:23932863-23932882 MsG0580025771.01.T01:intron 20.0%
!! TTAAGAATTTAGATTGCATA+TGG - Chr5:23928791-23928810 None:intergenic 20.0%
!! TTAATAAATGTTGATGTATC+TGG + Chr5:23931215-23931234 MsG0580025771.01.T01:intron 20.0%
!! TTCTACTTCTTAAGTTTATA+TGG + Chr5:23933447-23933466 MsG0580025771.01.T01:intron 20.0%
!! TTGAATTTATTGAATTCACA+TGG + Chr5:23932247-23932266 MsG0580025771.01.T01:intron 20.0%
!!! AAGATACACATATTGATTTA+AGG - Chr5:23933345-23933364 None:intergenic 20.0%
!!! AATATATATGAATTTTGACG+CGG - Chr5:23929976-23929995 None:intergenic 20.0%
!!! ACTCTACAAGTTTTTTTTAA+GGG + Chr5:23933578-23933597 MsG0580025771.01.T01:intron 20.0%
!!! CAAGATTGTATTAGTTTTAA+GGG - Chr5:23928891-23928910 None:intergenic 20.0%
!!! CTAAGATAGTCAAAATTTTA+TGG - Chr5:23928981-23929000 None:intergenic 20.0%
!!! TACATAAAAATTTGCTAACT+TGG + Chr5:23931519-23931538 MsG0580025771.01.T01:intron 20.0%
!!! TATTGATTATTGAGTCAAAA+AGG - Chr5:23929245-23929264 None:intergenic 20.0%
!!! TCAACTGTTATTTTAATTCA+AGG - Chr5:23931026-23931045 None:intergenic 20.0%
!!! TCAAGATTGTATTAGTTTTA+AGG - Chr5:23928892-23928911 None:intergenic 20.0%
!!! TTCTAAAAATTATGTCATAC+AGG + Chr5:23933992-23934011 MsG0580025771.01.T01:CDS 20.0%
!!! TTTTAAATTTTTCGCATGTT+AGG - Chr5:23928857-23928876 None:intergenic 20.0%
!!! TTTTTTGTAGTGATTTTAGT+AGG + Chr5:23929049-23929068 MsG0580025771.01.T01:intron 20.0%
!!! TTTTTTTGTATGAAATCAGA+AGG + Chr5:23930395-23930414 MsG0580025771.01.T01:intron 20.0%
! AAATAATCTCCAAACTATGT+TGG - Chr5:23928924-23928943 None:intergenic 25.0%
! AAATTCTCAAGGTTGTAAAT+GGG - Chr5:23933884-23933903 None:intergenic 25.0%
! AACAACAAAATCATGTGATA+CGG - Chr5:23930341-23930360 None:intergenic 25.0%
! ACTCAACTTAAATTATACCA+TGG + Chr5:23933610-23933629 MsG0580025771.01.T01:intron 25.0%
! AGATTAACAACTTGAAGATA+AGG - Chr5:23927565-23927584 None:intergenic 25.0%
! ATAATTGATCCAACATAGTT+TGG + Chr5:23928912-23928931 MsG0580025771.01.T01:intron 25.0%
! CAAAACTGTGTCAATTAAAT+TGG - Chr5:23933002-23933021 None:intergenic 25.0%
! CAATTCAATGTGTTAACAAT+GGG - Chr5:23927462-23927481 None:intergenic 25.0%
! CAATTTCATTAATGAAAGTC+TGG + Chr5:23928714-23928733 MsG0580025771.01.T01:intron 25.0%
! GATTAACAACTTGAAGATAA+GGG - Chr5:23927564-23927583 None:intergenic 25.0%
! GTACATTATTTCCTATGTAA+TGG - Chr5:23927615-23927634 None:intergenic 25.0%
! GTCGATCATTATAAAATGAA+CGG - Chr5:23933811-23933830 None:intergenic 25.0%
! TAAAAATTATGTCATACAGG+TGG + Chr5:23933995-23934014 MsG0580025771.01.T01:CDS 25.0%
! TAATCAATAATTTACTGCCA+TGG + Chr5:23929256-23929275 MsG0580025771.01.T01:intron 25.0%
! TACTTGTCTTATGTTTGATT+CGG + Chr5:23933515-23933534 MsG0580025771.01.T01:intron 25.0%
! TCAATTCAATGTGTTAACAA+TGG - Chr5:23927463-23927482 None:intergenic 25.0%
! TCAATTTCTTCAAATTCTCA+AGG - Chr5:23933895-23933914 None:intergenic 25.0%
! TCATAAGTAACTATTCCAAT+TGG + Chr5:23930992-23931011 MsG0580025771.01.T01:intron 25.0%
! TTGTATTCAGAATTAGTAGT+AGG - Chr5:23931049-23931068 None:intergenic 25.0%
!! AAGACAAGTAATAAGCATTT+TGG - Chr5:23933505-23933524 None:intergenic 25.0%
!! AGACTTTTCTTAATGCAATA+AGG - Chr5:23932102-23932121 None:intergenic 25.0%
!! AGAGCATATTTTGCTAAATA+AGG + Chr5:23928810-23928829 MsG0580025771.01.T01:intron 25.0%
!! AGTATAAAGTCGTTCTTTTA+TGG + Chr5:23931898-23931917 MsG0580025771.01.T01:intron 25.0%
!! CATTGCTTCTTTGTATATTT+TGG + Chr5:23932386-23932405 MsG0580025771.01.T01:intron 25.0%
!! GAATTGCTATGTATTTTGTT+GGG - Chr5:23926957-23926976 None:intergenic 25.0%
!! GGATCATGTTTTACTTTATT+TGG + Chr5:23930937-23930956 MsG0580025771.01.T01:intron 25.0%
!! GTCAAGTTATATCTTCATTT+TGG + Chr5:23932598-23932617 MsG0580025771.01.T01:intron 25.0%
!! GTGTATCTTTATAGGTTTTA+TGG + Chr5:23933356-23933375 MsG0580025771.01.T01:intron 25.0%
!! TGCAGTGTTCATAATTATTT+TGG + Chr5:23928481-23928500 MsG0580025771.01.T01:intron 25.0%
!! TTCAAGGAATTTTATCCAAT+TGG - Chr5:23931010-23931029 None:intergenic 25.0%
!! TTGAAATGAGTCACTTATTT+TGG + Chr5:23933143-23933162 MsG0580025771.01.T01:intron 25.0%
!! TTTATTTGGTTTCGTACTTA+CGG + Chr5:23930951-23930970 MsG0580025771.01.T01:intron 25.0%
!!! AACCAATTAATTTTGGTCAT+GGG - Chr5:23926979-23926998 None:intergenic 25.0%
!!! CACTCTACAAGTTTTTTTTA+AGG + Chr5:23933577-23933596 MsG0580025771.01.T01:intron 25.0%
!!! GGACACTTTTTTTAGAAAAT+GGG + Chr5:23933165-23933184 MsG0580025771.01.T01:intron 25.0%
!!! GGTGTTTTTTGACAAAATAT+AGG - Chr5:23928233-23928252 None:intergenic 25.0%
!!! GTTTATGGTTCATGATTTTT+TGG + Chr5:23927672-23927691 MsG0580025771.01.T01:intron 25.0%
!!! TCAATTTTCATTTGATAACG+CGG + Chr5:23930577-23930596 MsG0580025771.01.T01:intron 25.0%
!!! TCTTTTAGTTGTTTAACTTG+TGG - Chr5:23929769-23929788 None:intergenic 25.0%
!!! TGAAATGAGTCACTTATTTT+GGG + Chr5:23933144-23933163 MsG0580025771.01.T01:intron 25.0%
AAAAACTTAGTGGTACAAGT+TGG - Chr5:23929624-23929643 None:intergenic 30.0%
AAAACACACACCAAAAAACA+AGG + Chr5:23930042-23930061 MsG0580025771.01.T01:intron 30.0%
AAAAGACATCTTCCAATGTA+AGG - Chr5:23927805-23927824 None:intergenic 30.0%
AAAGTAAATAAAGGGGAAAG+TGG + Chr5:23933042-23933061 MsG0580025771.01.T01:intron 30.0%
AAAGTATATGGTGAAGAAAG+AGG - Chr5:23932763-23932782 None:intergenic 30.0%
AAATATACCTACTCTTGGTA+AGG - Chr5:23927520-23927539 None:intergenic 30.0%
AACTAGCTAGAAAAACAAAG+TGG - Chr5:23928118-23928137 None:intergenic 30.0%
AATATGCGGTCTACATTTAA+AGG + Chr5:23932712-23932731 MsG0580025771.01.T01:CDS 30.0%
AGATTTACAAGAGACATTTG+AGG + Chr5:23931192-23931211 MsG0580025771.01.T01:intron 30.0%
AGTCTTGAAACTAACAAAAC+CGG - Chr5:23930871-23930890 None:intergenic 30.0%
ATATCTTATCGTGTGTATAC+GGG + Chr5:23932908-23932927 MsG0580025771.01.T01:intron 30.0%
ATATGAAAATTGAGATGCTG+TGG - Chr5:23932892-23932911 None:intergenic 30.0%
CAAATTCTCAAGGTTGTAAA+TGG - Chr5:23933885-23933904 None:intergenic 30.0%
CACAACATTTAATGTAGTGT+AGG + Chr5:23933296-23933315 MsG0580025771.01.T01:intron 30.0%
CATATCTTATCGTGTGTATA+CGG + Chr5:23932907-23932926 MsG0580025771.01.T01:intron 30.0%
CTACACTACATTAAATGTTG+TGG - Chr5:23933298-23933317 None:intergenic 30.0%
GAAAAGTAAACCTTGTCATA+TGG - Chr5:23932069-23932088 None:intergenic 30.0%
GAATACTTAACAATGTCAGA+TGG - Chr5:23932848-23932867 None:intergenic 30.0%
GATACGGTAACATAAATGAA+CGG - Chr5:23930325-23930344 None:intergenic 30.0%
GCTATTCTATTACTAGTACT+TGG + Chr5:23931648-23931667 MsG0580025771.01.T01:intron 30.0%
GGTCAAAAGTGATAAATAAC+TGG - Chr5:23928960-23928979 None:intergenic 30.0%
GTAATTAGTGTAAACGGAAA+TGG - Chr5:23931675-23931694 None:intergenic 30.0%
GTGGAGAATATTGTAGTTAT+TGG + Chr5:23934014-23934033 MsG0580025771.01.T01:CDS 30.0%
TAAAATAAAAAGGCGGTGTA+AGG - Chr5:23928018-23928037 None:intergenic 30.0%
TAAGCGTTACTTATAAGTCT+AGG + Chr5:23932951-23932970 MsG0580025771.01.T01:intron 30.0%
TAATAGAATAGCTGACCTTA+GGG - Chr5:23931640-23931659 None:intergenic 30.0%
TAGAAAAACAAAGTGGAATC+TGG - Chr5:23928111-23928130 None:intergenic 30.0%
TATATATACGGTCAACAGTT+TGG - Chr5:23928573-23928592 None:intergenic 30.0%
TCTTATCATTGATCATGCTT+AGG - Chr5:23933721-23933740 None:intergenic 30.0%
TGAATATATCACAAACACAG+CGG + Chr5:23926800-23926819 MsG0580025771.01.T01:CDS 30.0%
TTCCCATGACCAAAATTAAT+TGG + Chr5:23926974-23926993 MsG0580025771.01.T01:intron 30.0%
TTGAATTCACATGGTGTAAA+AGG + Chr5:23932256-23932275 MsG0580025771.01.T01:intron 30.0%
TTTGTCAAAAAACACCTCTA+TGG + Chr5:23928237-23928256 MsG0580025771.01.T01:intron 30.0%
! AAGAGATTTCTCTTTTTCCA+TGG - Chr5:23929276-23929295 None:intergenic 30.0%
! AGTACATTTTACTGAGATGT+TGG + Chr5:23931550-23931569 MsG0580025771.01.T01:intron 30.0%
! ATATATTTGGGGTCAAATCT+TGG - Chr5:23929337-23929356 None:intergenic 30.0%
! ATTTTATGATCACTGCATCT+GGG + Chr5:23931785-23931804 MsG0580025771.01.T01:intron 30.0%
! CATTGGAAGATGTCTTTTAT+TGG + Chr5:23927807-23927826 MsG0580025771.01.T01:intron 30.0%
! CTTTTCTTAATGCAATAAGG+TGG - Chr5:23932099-23932118 None:intergenic 30.0%
! GGAATTGCTATGTATTTTGT+TGG - Chr5:23926958-23926977 None:intergenic 30.0%
! GTGTCTTAATGAACTTTTGA+CGG - Chr5:23933645-23933664 None:intergenic 30.0%
! GTTTTTCTTACTTGAGAATC+TGG - Chr5:23930466-23930485 None:intergenic 30.0%
! TATTTTATGATCACTGCATC+TGG + Chr5:23931784-23931803 MsG0580025771.01.T01:intron 30.0%
!! AAATGTTATCTCTGAAGTAC+GGG + Chr5:23927843-23927862 MsG0580025771.01.T01:intron 30.0%
!! AGCATGATTTGATTTGAATC+TGG - Chr5:23930108-23930127 None:intergenic 30.0%
!! ATTTGATTTGAATCTGGTGT+TGG - Chr5:23930102-23930121 None:intergenic 30.0%
!! CAAATGTTATCTCTGAAGTA+CGG + Chr5:23927842-23927861 MsG0580025771.01.T01:intron 30.0%
!! CTGTTATTGTTACTTTCATG+TGG + Chr5:23930677-23930696 MsG0580025771.01.T01:intron 30.0%
!! GAACCAATTAATTTTGGTCA+TGG - Chr5:23926980-23926999 None:intergenic 30.0%
!! TGTTCATCTCATTTTTGTTG+AGG + Chr5:23927905-23927924 MsG0580025771.01.T01:intron 30.0%
!!! AATGAACTTTTGACGGATTT+TGG - Chr5:23933638-23933657 None:intergenic 30.0%
!!! ACCTCTTTTTTATGCTAAGA+AGG + Chr5:23927195-23927214 MsG0580025771.01.T01:intron 30.0%
!!! AGATGTCTTTTATTGGTTTG+TGG + Chr5:23927814-23927833 MsG0580025771.01.T01:intron 30.0%
!!! CCTCTTTTTTATGCTAAGAA+GGG + Chr5:23927196-23927215 MsG0580025771.01.T01:intron 30.0%
!!! CTCTTTTTTATGCTAAGAAG+GGG + Chr5:23927197-23927216 MsG0580025771.01.T01:intron 30.0%
!!! GGGACACTTTTTTTAGAAAA+TGG + Chr5:23933164-23933183 MsG0580025771.01.T01:intron 30.0%
AAAAACAAAGTGGAATCTGG+TGG - Chr5:23928108-23928127 None:intergenic 35.0%
AAAACAAAGTGGAATCTGGT+GGG - Chr5:23928107-23928126 None:intergenic 35.0%
AAAATTTCCCCCTCAACTTA+CGG - Chr5:23931492-23931511 None:intergenic 35.0%
AAATTGACGCTAAAAGACAG+CGG - Chr5:23930564-23930583 None:intergenic 35.0%
AACTTACAAACCGTGATAAG+TGG + Chr5:23929910-23929929 MsG0580025771.01.T01:intron 35.0%
AAGAAGACCAAAGAGAGAAA+TGG + Chr5:23927058-23927077 MsG0580025771.01.T01:CDS 35.0%
AAGTAAACCTTGTCATATGG+TGG - Chr5:23932066-23932085 None:intergenic 35.0%
AAGTGACTTCAAACATGTAG+TGG - Chr5:23932287-23932306 None:intergenic 35.0%
AATGTAGACCGCATATTCAA+TGG - Chr5:23932709-23932728 None:intergenic 35.0%
ACGGAAAACGTTACATTACA+CGG - Chr5:23930714-23930733 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG + Chr5:23933178-23933197 MsG0580025771.01.T01:intron 35.0%
AGGACAAATATACCTACTCT+TGG - Chr5:23927525-23927544 None:intergenic 35.0%
AGTGACTTCAAACATGTAGT+GGG - Chr5:23932286-23932305 None:intergenic 35.0%
ATGAAATCAGAAGGAAGACA+TGG + Chr5:23930404-23930423 MsG0580025771.01.T01:intron 35.0%
ATTATTGAGTCAAAAAGGGC+AGG - Chr5:23929240-23929259 None:intergenic 35.0%
ATTGACAATAGAGTCCTACA+AGG + Chr5:23927488-23927507 MsG0580025771.01.T01:intron 35.0%
CCCTTCTTAGCATAAAAAAG+AGG - Chr5:23927199-23927218 None:intergenic 35.0%
CTGAATTGAAACACCAAAAC+AGG - Chr5:23932628-23932647 None:intergenic 35.0%
GAACGCGTAATTAGTGTAAA+CGG - Chr5:23931681-23931700 None:intergenic 35.0%
GAATACTTCCAATTGACACA+TGG - Chr5:23926915-23926934 None:intergenic 35.0%
GTAATAGAATAGCTGACCTT+AGG - Chr5:23931641-23931660 None:intergenic 35.0%
TATAGTGCACATGCAGTTTA+TGG + Chr5:23931946-23931965 MsG0580025771.01.T01:intron 35.0%
TCTCACTAACAGCATTATAG+TGG + Chr5:23931748-23931767 MsG0580025771.01.T01:intron 35.0%
TGAAACTAACAAAACCGGAT+CGG - Chr5:23930866-23930885 None:intergenic 35.0%
TGGAAATCCAAATGTGAGAA+GGG - Chr5:23932000-23932019 None:intergenic 35.0%
TGTTAACAATGGGTACTCTT+TGG - Chr5:23927452-23927471 None:intergenic 35.0%
TTACATTACACGGTTGTGTT+GGG - Chr5:23930704-23930723 None:intergenic 35.0%
TTGGAAATCCAAATGTGAGA+AGG - Chr5:23932001-23932020 None:intergenic 35.0%
TTGTGATATATTCACACCAG+TGG - Chr5:23926794-23926813 None:intergenic 35.0%
TTTGGTTATTGAAATCGCAG+TGG + Chr5:23933218-23933237 MsG0580025771.01.T01:intron 35.0%
! ACATTTTACTGAGATGTTGG+TGG + Chr5:23931553-23931572 MsG0580025771.01.T01:intron 35.0%
! ATTCTTAAACACCTGCGTTT+TGG - Chr5:23928264-23928283 None:intergenic 35.0%
! CATTTTACTGAGATGTTGGT+GGG + Chr5:23931554-23931573 MsG0580025771.01.T01:intron 35.0%
! GTTTTTCTCTTGTGTGATAC+TGG - Chr5:23930027-23930046 None:intergenic 35.0%
! TAAATAAGGAGCACATTGGT+TGG + Chr5:23928824-23928843 MsG0580025771.01.T01:intron 35.0%
! TGATTTGTGACGTGAATTGT+AGG - Chr5:23930143-23930162 None:intergenic 35.0%
! TGATTTTACTGTGCGTGTTT+AGG + Chr5:23930911-23930930 MsG0580025771.01.T01:intron 35.0%
! TTGCTAAATAAGGAGCACAT+TGG + Chr5:23928820-23928839 MsG0580025771.01.T01:intron 35.0%
! TTTCCTATGTAATGGGAAGA+TGG - Chr5:23927607-23927626 None:intergenic 35.0%
!! AATGTTATCTCTGAAGTACG+GGG + Chr5:23927844-23927863 MsG0580025771.01.T01:intron 35.0%
!! TTATTATATGGTGGGTCTCT+TGG + Chr5:23932798-23932817 MsG0580025771.01.T01:intron 35.0%
!!! ATTTTCATTTGATAACGCGG+AGG + Chr5:23930580-23930599 MsG0580025771.01.T01:intron 35.0%
AAACAAAGTGGAATCTGGTG+GGG - Chr5:23928106-23928125 None:intergenic 40.0%
AAGAAATGGCTTAACGCATG+AGG + Chr5:23927223-23927242 MsG0580025771.01.T01:intron 40.0%
AATTGACGCTAAAGACAGTG+CGG - Chr5:23930631-23930650 None:intergenic 40.0%
ACTTGGTCTGCCAAACAAAA+AGG - Chr5:23932668-23932687 None:intergenic 40.0%
AGGGAACACAGAAGCAATAT+AGG - Chr5:23927545-23927564 None:intergenic 40.0%
AGTCACCCAAATAAAAGACG+TGG - Chr5:23928054-23928073 None:intergenic 40.0%
ATTCAGACACAAAGTCTGAC+TGG + Chr5:23932642-23932661 MsG0580025771.01.T01:intron 40.0%
CTAAGAAGGGGCAAAAGAAA+TGG + Chr5:23927209-23927228 MsG0580025771.01.T01:intron 40.0%
CTCACATTTGGATTTCCAAC+CGG + Chr5:23932002-23932021 MsG0580025771.01.T01:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG + Chr5:23933179-23933198 MsG0580025771.01.T01:intron 40.0%
GAGACTGCAGAAATACAAGA+CGG + Chr5:23928753-23928772 MsG0580025771.01.T01:intron 40.0%
GCGTCAATTTCATTTGATCG+CGG + Chr5:23930642-23930661 MsG0580025771.01.T01:intron 40.0%
GGTCATTTCCATGTGTCAAT+TGG + Chr5:23926904-23926923 MsG0580025771.01.T01:intron 40.0%
GGTTTCGTACTTACGGAATT+AGG + Chr5:23930958-23930977 MsG0580025771.01.T01:intron 40.0%
GTATATGGTGAAGAAAGAGG+TGG - Chr5:23932760-23932779 None:intergenic 40.0%
GTGACTTCAAACATGTAGTG+GGG - Chr5:23932285-23932304 None:intergenic 40.0%
GTGTCAATTAAATTGGGACG+AGG - Chr5:23932995-23933014 None:intergenic 40.0%
GTGTGATACTGGTGAGATTT+GGG - Chr5:23930016-23930035 None:intergenic 40.0%
GTTACATTACACGGTTGTGT+TGG - Chr5:23930705-23930724 None:intergenic 40.0%
TCAATTTCATTTGATCGCGG+AGG + Chr5:23930645-23930664 MsG0580025771.01.T01:intron 40.0%
TCACATTTGGATTTCCAACC+GGG + Chr5:23932003-23932022 MsG0580025771.01.T01:intron 40.0%
TCATGTCTATCCCAGATGAT+GGG + Chr5:23934066-23934085 MsG0580025771.01.T01:CDS 40.0%
TCTTCATCCTTGCAATTTCG+CGG + Chr5:23933478-23933497 MsG0580025771.01.T01:intron 40.0%
TGTGTGATACTGGTGAGATT+TGG - Chr5:23930017-23930036 None:intergenic 40.0%
TGTTTGGCAGACCAAGTATT+CGG + Chr5:23932671-23932690 MsG0580025771.01.T01:intron 40.0%
TTGCACGAACAAGATTGTCT+CGG + Chr5:23927112-23927131 MsG0580025771.01.T01:CDS 40.0%
! CGATTGTAGTAGCCTTACAT+TGG + Chr5:23927790-23927809 MsG0580025771.01.T01:intron 40.0%
! CTATGTAATGGGAAGATGGT+GGG - Chr5:23927603-23927622 None:intergenic 40.0%
! GTCTTGTATTTCTGCAGTCT+CGG - Chr5:23928754-23928773 None:intergenic 40.0%
! TCATTTTGGACTGCCTGTTT+TGG + Chr5:23932612-23932631 MsG0580025771.01.T01:intron 40.0%
! TCTCTCTCTCTCTCGATTTT+CGG + Chr5:23930511-23930530 MsG0580025771.01.T01:intron 40.0%
! TTACTGTGCGTGTTTAGGAT+CGG + Chr5:23930916-23930935 MsG0580025771.01.T01:intron 40.0%
! TTCTTAAACACCCGCGTTTT+TGG - Chr5:23928179-23928198 None:intergenic 40.0%
!! CTTAGTGGTACAAGTTGGTA+TGG - Chr5:23929619-23929638 None:intergenic 40.0%
!! TAACTACTGCAGGGGTATTA+AGG + Chr5:23926883-23926902 MsG0580025771.01.T01:intron 40.0%
!!! AGACGACGAACCTTGTTTTT+TGG - Chr5:23930055-23930074 None:intergenic 40.0%
!!! TTTGACGGATTTTGGTACCA+TGG - Chr5:23933630-23933649 None:intergenic 40.0%
AAAAGGCGGTGTAAGGAATC+AGG - Chr5:23928011-23928030 None:intergenic 45.0%
AACAAAGTGGAATCTGGTGG+GGG - Chr5:23928105-23928124 None:intergenic 45.0%
AATCAGAAGGAAGACATGGC+TGG + Chr5:23930408-23930427 MsG0580025771.01.T01:intron 45.0%
AATGGCTTAACGCATGAGGA+AGG + Chr5:23927227-23927246 MsG0580025771.01.T01:intron 45.0%
ACCAAAGAGAGAAATGGCTG+GGG + Chr5:23927064-23927083 MsG0580025771.01.T01:CDS 45.0%
AGACCAAAGAGAGAAATGGC+TGG + Chr5:23927062-23927081 MsG0580025771.01.T01:CDS 45.0%
AGCGGTTGTTAACTACTGCA+GGG + Chr5:23926874-23926893 MsG0580025771.01.T01:intron 45.0%
ATCCTCTCATCCGGGTTAAA+CGG - Chr5:23930843-23930862 None:intergenic 45.0%
ATTGACGCTAAAGACAGTGC+GGG - Chr5:23930630-23930649 None:intergenic 45.0%
ATTTCATTTGATCGCGGAGG+TGG + Chr5:23930648-23930667 MsG0580025771.01.T01:intron 45.0%
CACCCAAATAAAAGACGTGG+TGG - Chr5:23928051-23928070 None:intergenic 45.0%
CATGGTTCCACCATATGACA+AGG + Chr5:23932056-23932075 MsG0580025771.01.T01:intron 45.0%
CCACCATCTTCCCATTACAT+AGG + Chr5:23927601-23927620 MsG0580025771.01.T01:intron 45.0%
CCTCAACTTACGGCATAGTT+GGG - Chr5:23931482-23931501 None:intergenic 45.0%
CCTTCTGCAAATGCAAAGCA+GGG + Chr5:23927033-23927052 MsG0580025771.01.T01:intron 45.0%
CTCATGTCTATCCCAGATGA+TGG + Chr5:23934065-23934084 MsG0580025771.01.T01:CDS 45.0%
GAACCATGTTGGCGATGTTA+CGG - Chr5:23932044-23932063 None:intergenic 45.0%
GACCAAAGAGAGAAATGGCT+GGG + Chr5:23927063-23927082 MsG0580025771.01.T01:CDS 45.0%
GAGTATGCCCTTCTCACATT+TGG + Chr5:23931990-23932009 MsG0580025771.01.T01:intron 45.0%
GCTCAGGATTCTTCGAAAAG+AGG - Chr5:23931590-23931609 None:intergenic 45.0%
GTTTGGCAGACCAAGTATTC+GGG + Chr5:23932672-23932691 MsG0580025771.01.T01:intron 45.0%
TATGGTGAAGAAAGAGGTGG+TGG - Chr5:23932757-23932776 None:intergenic 45.0%
TCCTTCTGCAAATGCAAAGC+AGG + Chr5:23927032-23927051 MsG0580025771.01.T01:intron 45.0%
TCGAAGAATCCTGAGCTGTA+CGG + Chr5:23931594-23931613 MsG0580025771.01.T01:CDS 45.0%
TCTCTTGGAACAGTGGAAGT+TGG + Chr5:23932813-23932832 MsG0580025771.01.T01:intron 45.0%
TGCAGTAGTTAACAACCGCT+GGG - Chr5:23926874-23926893 None:intergenic 45.0%
TTGACGCGGTAGCTATATAG+AGG - Chr5:23929962-23929981 None:intergenic 45.0%
! AACTATGCCGTAAGTTGAGG+GGG + Chr5:23931482-23931501 MsG0580025771.01.T01:intron 45.0%
! CAACTATGCCGTAAGTTGAG+GGG + Chr5:23931481-23931500 MsG0580025771.01.T01:intron 45.0%
! CCAACTATGCCGTAAGTTGA+GGG + Chr5:23931480-23931499 MsG0580025771.01.T01:intron 45.0%
! CCTATGTAATGGGAAGATGG+TGG - Chr5:23927604-23927623 None:intergenic 45.0%
! GTCATATGGTGGAACCATGT+TGG - Chr5:23932055-23932074 None:intergenic 45.0%
! TTTTGGTCCGCGAAATTGCA+AGG - Chr5:23933488-23933507 None:intergenic 45.0%
!! GGCCACCACGTCTTTTATTT+GGG + Chr5:23928046-23928065 MsG0580025771.01.T01:intron 45.0%
!! GTTAAACGGCTTTGAACCGT+TGG - Chr5:23930829-23930848 None:intergenic 45.0%
!! TTAAACACCCGCGTTTTTGG+AGG - Chr5:23928176-23928195 None:intergenic 45.0%
!! TTCATTTGATAACGCGGAGG+TGG + Chr5:23930583-23930602 MsG0580025771.01.T01:intron 45.0%
!!! GTCTGACTGGCCTTTTTGTT+TGG + Chr5:23932655-23932674 MsG0580025771.01.T01:intron 45.0%
!! AAAAAAATAAAATAAATAAC+TGG - Chr5:23928683-23928702 None:intergenic 5.0%
!! ATAAAAAATTAAAACTAATT+AGG - Chr5:23931712-23931731 None:intergenic 5.0%
!! TAATTGAAAAATTATTTAAT+TGG + Chr5:23927700-23927719 MsG0580025771.01.T01:intron 5.0%
!!! ATTTAATCTTTTTATATATT+TGG - Chr5:23929350-23929369 None:intergenic 5.0%
!!! ATTTTGATAAAAAATAATAT+AGG - Chr5:23928203-23928222 None:intergenic 5.0%
!!! ATTTTTATTTTTATTTTAGT+TGG + Chr5:23929021-23929040 MsG0580025771.01.T01:intron 5.0%
!!! CTTTATATTAATTTTTTTTT+TGG - Chr5:23929099-23929118 None:intergenic 5.0%
!!! TTTAATCTTTTTATATATTT+GGG - Chr5:23929349-23929368 None:intergenic 5.0%
!!! TTTTTTTATAATATAGTTTA+TGG + Chr5:23927657-23927676 MsG0580025771.01.T01:intron 5.0%
AAATGTTACTCCCTCCGTCC+CGG - Chr5:23933200-23933219 None:intergenic 50.0%
AATAGCTGACCTTAGGGCTC+TGG - Chr5:23931634-23931653 None:intergenic 50.0%
ACCTCTATGGTCCAAAACGC+AGG + Chr5:23928250-23928269 MsG0580025771.01.T01:intron 50.0%
ACTCAGCGGTAGTTAACGAC+CGG + Chr5:23926841-23926860 MsG0580025771.01.T01:intron 50.0%
AGACCAAGTATTCGGGAGCA+GGG + Chr5:23932679-23932698 MsG0580025771.01.T01:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + Chr5:23933183-23933202 MsG0580025771.01.T01:intron 50.0%
CAGCGGTTGTTAACTACTGC+AGG + Chr5:23926873-23926892 MsG0580025771.01.T01:intron 50.0%
CATGGCTGGAGAAACATTCG+AGG + Chr5:23930422-23930441 MsG0580025771.01.T01:intron 50.0%
CCCAACTATGCCGTAAGTTG+AGG + Chr5:23931479-23931498 MsG0580025771.01.T01:intron 50.0%
CCCTCAACTTACGGCATAGT+TGG - Chr5:23931483-23931502 None:intergenic 50.0%
CCCTGCTTTGCATTTGCAGA+AGG - Chr5:23927036-23927055 None:intergenic 50.0%
CGGTTCAAAGCCGTTTAACC+CGG + Chr5:23930830-23930849 MsG0580025771.01.T01:intron 50.0%
CTGCAGTAGTTAACAACCGC+TGG - Chr5:23926875-23926894 None:intergenic 50.0%
GAATCTGGTCAGAGTTGCGA+TGG - Chr5:23930451-23930470 None:intergenic 50.0%
GCACATGCCTTACCAAGAGT+AGG + Chr5:23927510-23927529 MsG0580025771.01.T01:intron 50.0%
GCGGAGTTATTAGAGGCCAA+CGG + Chr5:23930810-23930829 MsG0580025771.01.T01:CDS 50.0%
GCGGTTGTTAACTACTGCAG+GGG + Chr5:23926875-23926894 MsG0580025771.01.T01:intron 50.0%
GGTACAAGCCTCCAAAAACG+CGG + Chr5:23928165-23928184 MsG0580025771.01.T01:intron 50.0%
GTACAAGCCTCCAAAAACGC+GGG + Chr5:23928166-23928185 MsG0580025771.01.T01:intron 50.0%
GTTATTGGACACAGCTGCTG+TGG + Chr5:23934029-23934048 MsG0580025771.01.T01:CDS 50.0%
TGGATCACGACGTGAGACTT+GGG - Chr5:23929317-23929336 None:intergenic 50.0%
TGGTAAGGCATGTGCCTTGT+AGG - Chr5:23927505-23927524 None:intergenic 50.0%
TTCAGGGAGAAAGCTGAGCT+TGG + Chr5:23930754-23930773 MsG0580025771.01.T01:intron 50.0%
TTGGATCACGACGTGAGACT+TGG - Chr5:23929318-23929337 None:intergenic 50.0%
! AGCTGCTGTGGAGGCATAAA+GGG + Chr5:23934041-23934060 MsG0580025771.01.T01:CDS 50.0%
! GCTGGGTATGCCACTTATCA+CGG - Chr5:23929923-23929942 None:intergenic 50.0%
! GGACGGAGGGAGTAACATTT+TGG + Chr5:23933200-23933219 MsG0580025771.01.T01:intron 50.0%
! GGGCCACCACGTCTTTTATT+TGG + Chr5:23928045-23928064 MsG0580025771.01.T01:intron 50.0%
!! ACCTGCGTTTTGGACCATAG+AGG - Chr5:23928254-23928273 None:intergenic 50.0%
!! ATTTGATAACGCGGAGGTGG+TGG + Chr5:23930586-23930605 MsG0580025771.01.T01:intron 50.0%
!! GGAACAGTGGAAGTTGGTAG+AGG + Chr5:23932819-23932838 MsG0580025771.01.T01:intron 50.0%
AAAGTGGAATCTGGTGGGGG+TGG - Chr5:23928102-23928121 None:intergenic 55.0%
AAGTGGAATCTGGTGGGGGT+GGG - Chr5:23928101-23928120 None:intergenic 55.0%
AGCCGTTTAACCCGGATGAG+AGG + Chr5:23930838-23930857 MsG0580025771.01.T01:intron 55.0%
AGGGGCGGCCATTGAATATG+CGG + Chr5:23932698-23932717 MsG0580025771.01.T01:CDS 55.0%
ATTGGACACAGCTGCTGTGG+AGG + Chr5:23934032-23934051 MsG0580025771.01.T01:CDS 55.0%
CAGACCAAGTATTCGGGAGC+AGG + Chr5:23932678-23932697 MsG0580025771.01.T01:intron 55.0%
CAGCGGTAGTTAACAACCGC+TGG + Chr5:23926817-23926836 MsG0580025771.01.T01:intron 55.0%
CCGGAAGATCAAGGAGCTGA+CGG + Chr5:23930788-23930807 MsG0580025771.01.T01:CDS 55.0%
CCGTCAGCTCCTTGATCTTC+CGG - Chr5:23930791-23930810 None:intergenic 55.0%
GAAGATCAAGGAGCTGACGG+CGG + Chr5:23930791-23930810 MsG0580025771.01.T01:CDS 55.0%
GACCAAGTATTCGGGAGCAG+GGG + Chr5:23932680-23932699 MsG0580025771.01.T01:intron 55.0%
GCAAGTTCACCGTACAGCTC+AGG - Chr5:23931606-23931625 None:intergenic 55.0%
GCCCCAGCCATTTCTCTCTT+TGG - Chr5:23927068-23927087 None:intergenic 55.0%
GCTGACGGCGGAGTTATTAG+AGG + Chr5:23930803-23930822 MsG0580025771.01.T01:CDS 55.0%
GGCGATGTTACGGACCACAA+AGG - Chr5:23932034-23932053 None:intergenic 55.0%
GGTCCGTAACATCGCCAACA+TGG + Chr5:23932038-23932057 MsG0580025771.01.T01:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG + Chr5:23933187-23933206 MsG0580025771.01.T01:intron 55.0%
TAACAACCGCTGGCACTCAG+CGG + Chr5:23926827-23926846 MsG0580025771.01.T01:intron 55.0%
TAACTACCGCTGAGTGCCAG+CGG - Chr5:23926836-23926855 None:intergenic 55.0%
TCATTTGATCGCGGAGGTGG+TGG + Chr5:23930651-23930670 MsG0580025771.01.T01:intron 55.0%
TTGCCAAAGCCAGAGCCCTA+AGG + Chr5:23931622-23931641 MsG0580025771.01.T01:CDS 55.0%
TTGCGGTGGTCCCATCATCT+GGG - Chr5:23934079-23934098 None:intergenic 55.0%
! CAGCTGCTGTGGAGGCATAA+AGG + Chr5:23934040-23934059 MsG0580025771.01.T01:CDS 55.0%
! GCTGCTGTGGAGGCATAAAG+GGG + Chr5:23934042-23934061 MsG0580025771.01.T01:CDS 55.0%
! TGACCTTAGGGCTCTGGCTT+TGG - Chr5:23931628-23931647 None:intergenic 55.0%
! TGGTGGGTCTCTTGGAACAG+TGG + Chr5:23932806-23932825 MsG0580025771.01.T01:intron 55.0%
!! CTCTGAAGTACGGGGTGCAT+GGG + Chr5:23927852-23927871 MsG0580025771.01.T01:intron 55.0%
!! TCTCTGAAGTACGGGGTGCA+TGG + Chr5:23927851-23927870 MsG0580025771.01.T01:intron 55.0%
AATCTGGTGGGGGTGGGACT+TGG - Chr5:23928095-23928114 None:intergenic 60.0%
ACAACCGCTGGGAAACACGC+CGG - Chr5:23926863-23926882 None:intergenic 60.0%
CAAGTATTCGGGAGCAGGGG+CGG + Chr5:23932683-23932702 MsG0580025771.01.T01:CDS 60.0%
CCAACCGGGTGAAGCCTTTG+TGG + Chr5:23932017-23932036 MsG0580025771.01.T01:intron 60.0%
CCACAAAGGCTTCACCCGGT+TGG - Chr5:23932020-23932039 None:intergenic 60.0%
CCGGATCGGATCCTCTCATC+CGG - Chr5:23930852-23930871 None:intergenic 60.0%
CCGGATGAGAGGATCCGATC+CGG + Chr5:23930849-23930868 MsG0580025771.01.T01:intron 60.0%
CGGACCACAAAGGCTTCACC+CGG - Chr5:23932024-23932043 None:intergenic 60.0%
CGGATCGGATCCTCTCATCC+GGG - Chr5:23930851-23930870 None:intergenic 60.0%
CTTGCGGTGGTCCCATCATC+TGG - Chr5:23934080-23934099 None:intergenic 60.0%
GAGAGAGACCACAACGCGCT+GGG - Chr5:23929940-23929959 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG + Chr5:23933186-23933205 MsG0580025771.01.T01:intron 60.0%
TGATGGGACCACCGCAAGGT+AGG + Chr5:23934082-23934101 MsG0580025771.01.T01:CDS 60.0%
!! CAGATGATGGGACCACCGCA+AGG + Chr5:23934078-23934097 MsG0580025771.01.T01:CDS 60.0%
ACGACCGGCGTGTTTCCCAG+CGG + Chr5:23926856-23926875 MsG0580025771.01.T01:intron 65.0%
CGCCCCTGCTCCCGAATACT+TGG - Chr5:23932685-23932704 None:intergenic 65.0%
GGAGAGAGACCACAACGCGC+TGG - Chr5:23929941-23929960 None:intergenic 65.0%
GTGGCATACCCAGCGCGTTG+TGG + Chr5:23929929-23929948 MsG0580025771.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 23926787 23934103 23926787 ID=MsG0580025771.01;Name=MsG0580025771.01
Chr5 mRNA 23926787 23934103 23926787 ID=MsG0580025771.01.T01;Parent=MsG0580025771.01;Name=MsG0580025771.01.T01;_AED=0.50;_eAED=0.59;_QI=0|0|0.16|1|0|0|6|0|168
Chr5 exon 23926787 23926821 23926787 ID=MsG0580025771.01.T01:exon:24314;Parent=MsG0580025771.01.T01
Chr5 exon 23927054 23927133 23927054 ID=MsG0580025771.01.T01:exon:24315;Parent=MsG0580025771.01.T01
Chr5 exon 23930759 23930831 23930759 ID=MsG0580025771.01.T01:exon:24316;Parent=MsG0580025771.01.T01
Chr5 exon 23931566 23931643 23931566 ID=MsG0580025771.01.T01:exon:24317;Parent=MsG0580025771.01.T01
Chr5 exon 23932681 23932736 23932681 ID=MsG0580025771.01.T01:exon:24318;Parent=MsG0580025771.01.T01
Chr5 exon 23933919 23934103 23933919 ID=MsG0580025771.01.T01:exon:24319;Parent=MsG0580025771.01.T01
Chr5 CDS 23926787 23926821 23926787 ID=MsG0580025771.01.T01:cds;Parent=MsG0580025771.01.T01
Chr5 CDS 23927054 23927133 23927054 ID=MsG0580025771.01.T01:cds;Parent=MsG0580025771.01.T01
Chr5 CDS 23930759 23930831 23930759 ID=MsG0580025771.01.T01:cds;Parent=MsG0580025771.01.T01
Chr5 CDS 23931566 23931643 23931566 ID=MsG0580025771.01.T01:cds;Parent=MsG0580025771.01.T01
Chr5 CDS 23932681 23932736 23932681 ID=MsG0580025771.01.T01:cds;Parent=MsG0580025771.01.T01
Chr5 CDS 23933919 23934103 23933919 ID=MsG0580025771.01.T01:cds;Parent=MsG0580025771.01.T01
Gene Sequence

>MsG0580025771.01.T01

ATGGCCACTGGTGTGAATATATCACAAACACAGCGGGTGAAGAAGACCAAAGAGAGAAATGGCTGGGGCATTCAAAAAGTGCATGATGCTGTGTTGCACGAACAAGATTGTCTCGGGAGAAAGCTGAGCTTGGTGACATCGCCGCCGGAAGATCAAGGAGCTGACGGCGGAGTTATTAGAGGCCAACGATGTTGGTGGGTGCTGTACGTCCTCTTTTCGAAGAATCCTGAGCTGTACGGTGAACTTGCCAAAGCCAGAGCCCTAAGACCAAGTATTCGGGAGCAGGGGCGGCCATTGAATATGCGGTCTACATTTAAAGGTCATAATGTGTTAGTATTGATGAACAAAATGTCTTTCTCTAAAACTCCAATAGCATTTTACTTTTTTATTTTGGATTCTAAAAATTATGTCATACAGGTGGAGAATATTGTAGTTATTGGACACAGCTGCTGTGGAGGCATAAAGGGGCTCATGTCTATCCCAGATGATGGGACCACCGCAAGGTAG
Protein sequence

>MsG0580025771.01.T01

MATGVNISQTQRVKKTKERNGWGIQKVHDAVLHEQDCLGRKLSLVTSPPEDQGADGGVIRGQRCWWVLYVLFSKNPELYGELAKARALRPSIREQGRPLNMRSTFKGHNVLVLMNKMSFSKTPIAFYFFILDSKNYVIQVENIVVIGHSCCGGIKGLMSIPDDGTTAR*