AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025931.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025931.01.T01 MTR_5g078250 37.360 447 208 3 1 407 1 415 1.01e-102 317
MsG0580025931.01.T01 MTR_8g062030 34.756 492 245 6 1 451 1 457 3.46e-93 294
MsG0580025931.01.T01 MTR_1g075850 38.575 407 222 6 1 407 1 379 1.87e-89 283
MsG0580025931.01.T01 MTR_6g052340 41.438 292 127 5 1 286 1 254 1.89e-62 215
MsG0580025931.01.T01 MTR_4g036240 31.643 414 244 8 17 407 17 414 7.93e-56 195
MsG0580025931.01.T01 MTR_4g046077 36.486 296 149 5 103 381 1 274 1.65e-52 182
MsG0580025931.01.T01 MTR_2g048560 29.870 462 278 10 1 437 1 441 5.53e-51 182
MsG0580025931.01.T01 MTR_3g056270 30.964 394 231 9 37 407 198 573 8.41e-46 170
MsG0580025931.01.T01 MTR_3g056270 36.788 193 122 0 17 209 17 209 2.10e-31 128
MsG0580025931.01.T01 MTR_8g479260 28.199 422 250 11 18 407 20 420 2.93e-44 164
MsG0580025931.01.T01 MTR_2g008650 28.199 422 250 11 18 407 20 420 5.96e-44 163
MsG0580025931.01.T01 MTR_4g036240 31.034 348 200 9 84 407 3 334 5.70e-38 145
MsG0580025931.01.T01 MTR_8g463820 30.566 265 139 2 8 272 8 227 1.06e-37 139
MsG0580025931.01.T01 MTR_6g039240 30.566 265 139 2 8 272 8 227 1.48e-37 139
MsG0580025931.01.T01 MTR_8g088810 31.985 272 151 2 8 277 8 247 1.50e-37 140
MsG0580025931.01.T01 MTR_1g094230 29.811 265 141 2 8 272 8 227 2.63e-36 136
MsG0580025931.01.T01 MTR_3g056240 35.885 209 129 3 4 211 7 211 7.01e-34 130
MsG0580025931.01.T01 MTR_0042s0170 30.114 352 168 8 103 451 1 277 8.36e-34 132
MsG0580025931.01.T01 MTR_2g048550 27.338 417 255 8 21 408 21 418 9.84e-34 133
MsG0580025931.01.T01 MTR_6g051890 42.581 155 89 0 1 155 5 159 3.68e-33 130
MsG0580025931.01.T01 MTR_6g051890 27.046 281 123 10 150 372 33 289 2.09e-15 78.6
MsG0580025931.01.T01 MTR_7g089660 32.683 205 125 1 8 212 8 199 7.50e-33 125
MsG0580025931.01.T01 MTR_8g059025 42.754 138 79 0 1 138 1 138 2.56e-32 120
MsG0580025931.01.T01 MTR_8g062060 25.000 428 239 7 13 397 13 401 3.21e-32 129
MsG0580025931.01.T01 MTR_3g044760 29.073 313 199 5 1 309 1 294 4.10e-32 128
MsG0580025931.01.T01 MTR_2g062200 39.053 169 103 0 44 212 1 169 1.26e-31 120
MsG0580025931.01.T01 MTR_2g054710 35.204 196 125 2 18 212 20 214 2.34e-31 122
MsG0580025931.01.T01 MTR_6g069230 30.566 265 146 4 4 266 100 328 1.21e-29 119
MsG0580025931.01.T01 MTR_4g471610 34.337 166 108 1 8 173 8 172 1.57e-28 111
MsG0580025931.01.T01 MTR_3g078440 34.337 166 108 1 8 173 8 172 1.57e-28 111
MsG0580025931.01.T01 MTR_8g036090 34.337 166 108 1 8 173 8 172 1.57e-28 111
MsG0580025931.01.T01 MTR_1g050500 26.975 367 183 7 81 406 5 327 1.59e-28 119
MsG0580025931.01.T01 MTR_1g036740 34.337 166 108 1 8 173 8 172 2.99e-28 110
MsG0580025931.01.T01 MTR_8g096680 34.337 166 108 1 8 173 8 172 2.99e-28 110
MsG0580025931.01.T01 MTR_8g467450 40.288 139 83 0 1 139 1 139 3.85e-28 109
MsG0580025931.01.T01 MTR_3g095950 33.735 166 109 1 8 173 8 172 6.96e-28 109
MsG0580025931.01.T01 MTR_3g116750 33.735 166 109 1 8 173 8 172 9.41e-28 109
MsG0580025931.01.T01 MTR_4g036240 28.920 287 165 8 144 407 1 271 1.53e-27 114
MsG0580025931.01.T01 MTR_7g093810 33.133 166 110 1 8 173 8 172 1.01e-26 106
MsG0580025931.01.T01 MTR_1g105785 23.864 440 294 10 1 416 1 423 1.94e-24 107
MsG0580025931.01.T01 MTR_3g081610 33.526 173 102 4 252 424 12 171 1.94e-24 101
MsG0580025931.01.T01 MTR_5g085220 32.099 162 110 0 8 169 8 169 2.98e-24 99.8
MsG0580025931.01.T01 MTR_5g055160 33.553 152 101 0 8 159 8 159 5.58e-24 101
MsG0580025931.01.T01 MTR_6g013455 26.792 265 132 3 8 272 8 210 9.63e-24 100
MsG0580025931.01.T01 MTR_6g445520 25.316 316 169 5 142 416 1 290 9.72e-24 103
MsG0580025931.01.T01 MTR_4g028320 34.641 153 99 1 21 173 2 153 7.39e-23 95.1
MsG0580025931.01.T01 MTR_3g084550 36.364 132 83 1 42 173 1 131 3.26e-21 89.7
MsG0580025931.01.T01 MTR_1g072220 36.364 132 83 1 42 173 1 131 9.25e-21 88.6
MsG0580025931.01.T01 MTR_2g099880 37.879 132 81 1 42 173 7 137 5.59e-20 86.7
MsG0580025931.01.T01 MTR_4g016120 36.290 124 78 1 50 173 41 163 1.45e-19 86.3
MsG0580025931.01.T01 MTR_2g032570 32.738 168 110 2 8 173 8 174 7.68e-19 84.3
MsG0580025931.01.T01 MTR_6g465570 33.758 157 103 1 14 170 10 165 2.17e-18 83.2
MsG0580025931.01.T01 MTR_8g461360 34.586 133 87 0 60 192 3 135 2.71e-18 84.0
MsG0580025931.01.T01 MTR_7g110100 22.770 426 269 10 1 391 1 401 5.25e-18 87.0
MsG0580025931.01.T01 MTR_5g056060 31.579 152 98 1 8 159 8 153 6.26e-18 83.6
MsG0580025931.01.T01 MTR_7g051400 23.129 441 280 11 1 419 1 404 1.42e-17 85.9
MsG0580025931.01.T01 MTR_7g451880 28.125 192 135 3 22 211 23 213 1.72e-17 84.0
MsG0580025931.01.T01 MTR_7g104000 30.921 152 99 1 8 159 8 153 2.50e-17 81.6
MsG0580025931.01.T01 MTR_8g469510 45.679 81 44 0 21 101 4 84 3.88e-17 77.0
MsG0580025931.01.T01 MTR_1g052715 30.058 173 117 4 42 211 1 172 4.26e-17 82.8
MsG0580025931.01.T01 MTR_4g022520 35.772 123 78 1 51 173 11 132 8.16e-17 79.3
MsG0580025931.01.T01 MTR_4g134870 38.655 119 63 1 273 381 141 259 1.12e-16 82.4
MsG0580025931.01.T01 MTR_4g071730 29.870 154 63 2 119 272 1 109 1.13e-16 77.4
MsG0580025931.01.T01 MTR_4g058660 28.962 183 128 2 22 203 22 203 2.34e-16 80.5
MsG0580025931.01.T01 MTR_5g007120 36.364 110 70 0 50 159 19 128 4.66e-16 77.8
MsG0580025931.01.T01 MTR_5g070620 42.857 77 44 0 2 78 27 103 1.36e-15 72.8
MsG0580025931.01.T01 MTR_1g060700 31.461 178 58 2 127 272 25 170 1.65e-15 79.3
MsG0580025931.01.T01 MTR_8g446640 27.083 192 137 3 22 211 3 193 3.93e-15 76.6
MsG0580025931.01.T01 MTR_7g032985 46.479 71 38 0 100 170 1 71 4.12e-15 70.5
MsG0580025931.01.T01 MTR_8g078450 39.394 99 59 1 75 173 2 99 4.21e-15 73.2
MsG0580025931.01.T01 MTR_5g068430 29.252 147 97 1 8 154 8 147 5.33e-15 73.9
MsG0580025931.01.T01 MTR_1g023370 27.083 192 137 3 22 211 22 212 5.60e-15 76.3
MsG0580025931.01.T01 MTR_7g024060 27.083 192 137 3 22 211 22 212 8.14e-15 75.9
MsG0580025931.01.T01 MTR_6g087820 27.083 192 137 3 22 211 22 212 8.14e-15 75.9
MsG0580025931.01.T01 MTR_5g081190 27.083 192 137 3 22 211 22 212 8.14e-15 75.9
MsG0580025931.01.T01 MTR_5g091480 27.083 192 137 3 22 211 22 212 8.14e-15 75.9
MsG0580025931.01.T01 MTR_5g056290 27.083 192 137 3 22 211 22 212 8.14e-15 75.9
MsG0580025931.01.T01 MTR_3g031190 27.083 192 137 3 22 211 22 212 8.14e-15 75.9
MsG0580025931.01.T01 MTR_2g005490 27.083 192 137 3 22 211 22 212 8.14e-15 75.9
MsG0580025931.01.T01 MTR_2g010570 27.083 192 137 3 22 211 22 212 8.14e-15 75.9
MsG0580025931.01.T01 MTR_5g030110 27.083 192 137 3 22 211 22 212 8.44e-15 75.9
MsG0580025931.01.T01 MTR_2g007410 27.083 192 137 3 22 211 22 212 8.44e-15 75.9
MsG0580025931.01.T01 MTR_7g074180 26.562 192 138 3 22 211 22 212 1.01e-14 75.5
MsG0580025931.01.T01 MTR_3g015660 26.042 192 139 3 22 211 22 212 2.33e-14 73.2
MsG0580025931.01.T01 MTR_1788s0010 30.000 130 91 0 10 139 10 139 2.44e-14 70.5
MsG0580025931.01.T01 MTR_8g005940 29.193 161 112 2 22 181 22 181 1.36e-13 71.6
MsG0580025931.01.T01 MTR_3g037500 31.677 161 106 2 50 208 2 160 2.17e-13 71.2
MsG0580025931.01.T01 MTR_2g010270 26.368 201 136 4 22 211 3 202 2.90e-13 70.9
MsG0580025931.01.T01 MTR_2g058350 30.588 170 112 3 4 170 4 170 3.18e-13 71.6
MsG0580025931.01.T01 MTR_1g082860 24.479 192 133 3 22 211 22 203 6.48e-13 69.3
MsG0580025931.01.T01 MTR_4g085760 23.404 329 231 12 8 326 14 331 1.39e-12 70.1
MsG0580025931.01.T01 MTR_1g011490 22.508 311 209 8 22 321 22 311 1.91e-12 68.6
MsG0580025931.01.T01 MTR_7g051840 29.688 128 86 1 44 171 1 124 3.80e-12 63.9
MsG0580025931.01.T01 MTR_7g045450 28.049 164 116 2 21 183 21 183 1.55e-11 65.1
MsG0580025931.01.T01 MTR_6g073570 28.049 164 116 2 21 183 21 183 1.55e-11 65.1
MsG0580025931.01.T01 MTR_5g045850 29.870 154 106 2 51 203 36 188 1.57e-11 65.5
MsG0580025931.01.T01 MTR_7g117425 37.963 108 61 1 1 108 1 102 3.32e-11 63.9
MsG0580025931.01.T01 MTR_3g452170 27.778 216 147 5 1 211 1 212 3.90e-11 65.5
MsG0580025931.01.T01 MTR_5g019960 30.380 158 105 5 53 207 59 214 5.04e-11 63.5
MsG0580025931.01.T01 MTR_1g091180 32.323 99 67 0 24 122 2 100 8.78e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025931.01.T01 AT1G52950 24.297 391 220 10 4 369 6 345 2.71e-19 91.3
MsG0580025931.01.T01 AT2G05642 23.007 439 230 12 22 406 22 406 8.45e-18 86.7

Find 107 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTCAAGCATACATATTT+TGG 0.163931 5:+27266772 None:intergenic
GATCAATTGCAATCTTTAAT+TGG 0.183529 5:-27266590 MsG0580025931.01.T01:CDS
TATATTTGTGTAGATGTTAT+TGG 0.194687 5:-27266848 MsG0580025931.01.T01:intron
TGGATGGATCCACCACTTAA+AGG 0.269435 5:-27267615 MsG0580025931.01.T01:CDS
AGCTGGCAACGACAAATTTC+AGG 0.276234 5:+27267002 None:intergenic
TACTGCTCAGGTTGATATTA+AGG 0.293700 5:-27264961 MsG0580025931.01.T01:CDS
AAACAGATGCAGCAACTCTT+TGG 0.301354 5:+27267202 None:intergenic
GGTTTGTGTGATGTTGTTCC+TGG 0.328369 5:-27267594 MsG0580025931.01.T01:CDS
TAAAGATGAAATCAAAGAAT+TGG 0.343891 5:-27264901 MsG0580025931.01.T01:CDS
GCAAGCTCAATTACAACAAC+TGG 0.347323 5:+27266548 None:intergenic
GTCCTGTATCGTCCATTTGC+TGG 0.354358 5:+27267125 None:intergenic
TTTCAAATCCAGACACTTCC+AGG 0.356281 5:-27264663 MsG0580025931.01.T01:intron
CAAGAAGAAGTGTGCAAGTT+TGG 0.357126 5:-27265691 MsG0580025931.01.T01:CDS
TTCTATGTTGTTCCAGCAAA+TGG 0.359343 5:-27267137 MsG0580025931.01.T01:CDS
GTGCTGAAGGTGGGGATTGG+TGG 0.367243 5:-27265998 MsG0580025931.01.T01:CDS
CTTGAACATGACTTCTTAGT+TGG 0.368764 5:-27266981 MsG0580025931.01.T01:intron
TCAATTATGCTGACATCAAA+AGG 0.378248 5:+27267516 None:intergenic
CATAATTGAGTCACTAGAAA+TGG 0.382267 5:-27267502 MsG0580025931.01.T01:CDS
ATGTGAGTTTGAAGCTTTGA+AGG 0.386032 5:-27265530 MsG0580025931.01.T01:CDS
CACAAATAAAACAAACAATT+AGG 0.398298 5:+27266470 None:intergenic
TTTGATTTCATCTTTATGAT+TGG 0.400582 5:+27264908 None:intergenic
TACTACGAGGGAATACATTA+AGG 0.402942 5:-27266807 MsG0580025931.01.T01:CDS
AACAGATGCAGCAACTCTTT+GGG 0.404351 5:+27267203 None:intergenic
ACTATCTATCTTATTGATGA+AGG 0.412005 5:-27266431 MsG0580025931.01.T01:CDS
GTTGTGCTGAAGGTGGGGAT+TGG 0.414620 5:-27266001 MsG0580025931.01.T01:CDS
GATGTTATTGGATTTCTCAT+TGG 0.418061 5:-27266836 MsG0580025931.01.T01:CDS
GGACCTGGTTCATCAATCAT+TGG 0.431644 5:-27264880 MsG0580025931.01.T01:intron
TGGCCGAGGGTGATGTCTAT+AGG 0.433735 5:-27267169 MsG0580025931.01.T01:CDS
TGTTTCAAGGCAAGAAATGC+AGG 0.435359 5:-27265562 MsG0580025931.01.T01:intron
AAATCAAAATATTCCGAGTT+GGG 0.438324 5:-27266523 MsG0580025931.01.T01:CDS
TTAATTGGAAAGCCTGTTGA+AGG 0.438892 5:-27266575 MsG0580025931.01.T01:CDS
CACTTGGAACATAAGTTTGT+AGG 0.439169 5:+27267091 None:intergenic
TTGTAAGAACCATCGTGGTT+TGG 0.443434 5:+27265463 None:intergenic
GGTAGGTTGTGCTGAAGGTG+GGG 0.450339 5:-27266006 MsG0580025931.01.T01:CDS
GAGTTGCTGCATCTGTTTGA+AGG 0.460099 5:-27267197 MsG0580025931.01.T01:CDS
GTACGTGGTTCATGCACGTT+TGG 0.462033 5:-27266027 MsG0580025931.01.T01:CDS
AAATTTGAATGTGTATTGTT+TGG 0.462802 5:-27266623 MsG0580025931.01.T01:CDS
AGCTTTGAAGGACAAACAAT+TGG 0.463397 5:-27265518 MsG0580025931.01.T01:CDS
TCAAAGGCGATGGTGGATGA+TGG 0.468136 5:-27265765 MsG0580025931.01.T01:CDS
TTTCAACCACTGTGTTCACT+TGG 0.471431 5:+27267075 None:intergenic
CTAAATGCTACAATCGAAGA+TGG 0.474891 5:-27266053 MsG0580025931.01.T01:CDS
TGGTAGGTTGTGCTGAAGGT+GGG 0.480053 5:-27266007 MsG0580025931.01.T01:CDS
ACAACTGGAAAACCTTCAAC+AGG 0.480667 5:+27266563 None:intergenic
GTTGACCATGCAAGAGCTCC+AGG 0.488510 5:+27267576 None:intergenic
TAAGTCTAGGGATACTGCTC+AGG 0.493286 5:-27264973 MsG0580025931.01.T01:CDS
AACATAAGTTTGTAGGAATG+AGG 0.501981 5:+27267098 None:intergenic
GTTTGAAGGGAAGGTGGCCG+AGG 0.502591 5:-27267183 MsG0580025931.01.T01:CDS
GTGTGTCACAAGTCGTTGTC+TGG 0.510346 5:-27265963 MsG0580025931.01.T01:CDS
TGGCTGAATAGGTTAAGTCT+AGG 0.511110 5:-27264986 MsG0580025931.01.T01:intron
TCAGGTTGATATTAAGGATG+AGG 0.513134 5:-27264955 MsG0580025931.01.T01:CDS
TTGGTAGGTTGTGCTGAAGG+TGG 0.513479 5:-27266008 MsG0580025931.01.T01:CDS
AAAATCAAAATATTCCGAGT+TGG 0.513948 5:-27266524 MsG0580025931.01.T01:CDS
GTGAGGATTCATTGAAATCC+TGG 0.514382 5:+27266376 None:intergenic
CAATTATGCTGACATCAAAA+GGG 0.515660 5:+27267517 None:intergenic
TTGTTCCTGGAGCTCTTGCA+TGG 0.516660 5:-27267581 MsG0580025931.01.T01:CDS
TTCCAGCAAATGGACGATAC+AGG 0.518091 5:-27267127 MsG0580025931.01.T01:CDS
GTGGTTCATGCACGTTTGGT+AGG 0.526241 5:-27266023 MsG0580025931.01.T01:CDS
AATTCAAAATCAGTGGGTCC+TGG 0.529573 5:+27264645 None:intergenic
CAAAGGCGATGGTGGATGAT+GGG 0.542632 5:-27265764 MsG0580025931.01.T01:CDS
ATCAGCTTTATATGCCTCCA+TGG 0.553906 5:+27264578 None:intergenic
GAATCCTCACATTCCTGAAG+TGG 0.554452 5:-27266363 MsG0580025931.01.T01:CDS
GGCTGAATAGGTTAAGTCTA+GGG 0.556468 5:-27264985 MsG0580025931.01.T01:intron
TGCTGACATCAAAAGGGGCA+TGG 0.558273 5:+27267523 None:intergenic
TTTGATGGATTTGGACACCA+TGG 0.559858 5:-27264595 MsG0580025931.01.T01:CDS
AGCTGATATTATTCCGTCCA+AGG 0.560135 5:-27264562 MsG0580025931.01.T01:CDS
TCCTCCACTTCAGGAATGTG+AGG 0.560487 5:+27266359 None:intergenic
AGTTGCTGCATCTGTTTGAA+GGG 0.561556 5:-27267196 MsG0580025931.01.T01:CDS
CTTTGTGAATTCAAAATCAG+TGG 0.563542 5:+27264638 None:intergenic
GCTGCATCTGTTTGAAGGGA+AGG 0.565532 5:-27267192 MsG0580025931.01.T01:CDS
TACAAAGTCAAAGGCGATGG+TGG 0.566462 5:-27265772 MsG0580025931.01.T01:CDS
TGGTGATATTCATAGCACTT+TGG 0.568866 5:+27266396 None:intergenic
TTCATAGCACTTTGGACCGA+GGG 0.569330 5:+27266404 None:intergenic
CTAAGAAGTCATGTTCAAGC+TGG 0.572895 5:+27266985 None:intergenic
ACATCACACAAACCTTTAAG+TGG 0.573399 5:+27267603 None:intergenic
CGTTTGGTAGGTTGTGCTGA+AGG 0.574422 5:-27266011 MsG0580025931.01.T01:CDS
AAGAAGTGTGCAAGTTTGGT+TGG 0.574865 5:-27265687 MsG0580025931.01.T01:CDS
TCCTCACATTCCTGAAGTGG+AGG 0.581024 5:-27266360 MsG0580025931.01.T01:CDS
AGGTACAAAGTCAAAGGCGA+TGG 0.582090 5:-27265775 MsG0580025931.01.T01:CDS
AAGTTTGGTTGGTGTAGCTG+AGG 0.593280 5:-27265676 MsG0580025931.01.T01:intron
TTGGCAGTATGTCCCTCCAT+AGG 0.599184 5:+27264927 None:intergenic
AAACCACGATGGTTCTTACA+AGG 0.599280 5:-27265461 MsG0580025931.01.T01:intron
TTTGTGAATTCAAAATCAGT+GGG 0.600542 5:+27264639 None:intergenic
TAAATGCTACAATCGAAGAT+GGG 0.602803 5:-27266052 MsG0580025931.01.T01:CDS
TATTGATGAAGGATATCCCT+CGG 0.604400 5:-27266420 MsG0580025931.01.T01:CDS
GTTTCAAGGCAAGAAATGCA+GGG 0.611166 5:-27265561 MsG0580025931.01.T01:intron
CATTGGTATATCTACTACGA+GGG 0.615580 5:-27266819 MsG0580025931.01.T01:CDS
ATTCATAGCACTTTGGACCG+AGG 0.616018 5:+27266403 None:intergenic
TTTGAAGGGAAGGTGGCCGA+GGG 0.616793 5:-27267182 MsG0580025931.01.T01:CDS
TTCAAAGCTTCAAACTCACA+TGG 0.618048 5:+27265532 None:intergenic
TCACACAAACCTTTAAGTGG+TGG 0.618123 5:+27267606 None:intergenic
TATGAGTATAATGCCCAACT+CGG 0.620514 5:+27266510 None:intergenic
AGCTCTTGCATGGTCAACGA+TGG 0.624188 5:-27267571 MsG0580025931.01.T01:CDS
ACGAGGGAATACATTAAGGA+TGG 0.630084 5:-27266803 MsG0580025931.01.T01:CDS
TGCTTGAGCTCAATGATGCT+AGG 0.639080 5:-27266760 MsG0580025931.01.T01:intron
TCACCAATGATTGATGAACC+AGG 0.643628 5:+27264877 None:intergenic
TGAAATCAAAGAATTGGACC+TGG 0.661051 5:-27264895 MsG0580025931.01.T01:CDS
GATGGATTTGGACACCATGG+AGG 0.661634 5:-27264592 MsG0580025931.01.T01:CDS
AATTATGCTGACATCAAAAG+GGG 0.664328 5:+27267518 None:intergenic
GATCCTATAGACATCACCCT+CGG 0.668797 5:+27267166 None:intergenic
GCATCTGTTTGAAGGGAAGG+TGG 0.669076 5:-27267189 MsG0580025931.01.T01:CDS
AATCGAAGATGGGTTGTACG+TGG 0.684195 5:-27266042 MsG0580025931.01.T01:CDS
AAAGTGCTATGAATATCACC+AGG 0.688282 5:-27266394 MsG0580025931.01.T01:CDS
TGACCTTGTAAGAACCATCG+TGG 0.690574 5:+27265458 None:intergenic
CAATTAGGCAGAATATGTCG+AGG 0.700038 5:+27266485 None:intergenic
TCATTGGTATATCTACTACG+AGG 0.719508 5:-27266820 MsG0580025931.01.T01:CDS
TCTGCAAATCCAAACCACGA+TGG 0.721113 5:-27265472 MsG0580025931.01.T01:CDS
TATGTTCCAAGTGAACACAG+TGG 0.801513 5:-27267081 MsG0580025931.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATTCCTTTTTAAAAT+AGG - Chr5:27266753-27266772 MsG0580025931.01.T01:intron 10.0%
!! TAAAAAGGAATAAAAAACAT+CGG + Chr5:27266749-27266768 None:intergenic 15.0%
!! TCTTATATCTTATATTTGAA+AGG - Chr5:27266559-27266578 MsG0580025931.01.T01:CDS 15.0%
!!! AAGAAATACCTATTTTAAAA+AGG + Chr5:27266764-27266783 None:intergenic 15.0%
!! AAAAAGGAATAAAAAACATC+GGG + Chr5:27266748-27266767 None:intergenic 20.0%
!! AAAAATAAATAGTCCAATTC+AGG + Chr5:27267482-27267501 None:intergenic 20.0%
!! AAAATAAATAGTCCAATTCA+GGG + Chr5:27267481-27267500 None:intergenic 20.0%
!! AAATTTGAATGTGTATTGTT+TGG - Chr5:27265540-27265559 MsG0580025931.01.T01:CDS 20.0%
!! ACATAGTTCTTAAGAATAAT+TGG + Chr5:27266930-27266949 None:intergenic 20.0%
!! ATTAACTCAACAATAATAAC+TGG + Chr5:27265442-27265461 None:intergenic 20.0%
!! CACAAATAAAACAAACAATT+AGG + Chr5:27265696-27265715 None:intergenic 20.0%
!! TAAAAAACGATAACAAATGA+GGG + Chr5:27265136-27265155 None:intergenic 20.0%
!! TAAAGATGAAATCAAAGAAT+TGG - Chr5:27267262-27267281 MsG0580025931.01.T01:intron 20.0%
!! TATATTTGTGTAGATGTTAT+TGG - Chr5:27265315-27265334 MsG0580025931.01.T01:intron 20.0%
!! TTTACTACTTTAGTTAACTT+AGG - Chr5:27267052-27267071 MsG0580025931.01.T01:CDS 20.0%
!!! AATTGTTTGTTTTATTTGTG+TGG - Chr5:27265696-27265715 MsG0580025931.01.T01:CDS 20.0%
!!! TTTGATTTCATCTTTATGAT+TGG + Chr5:27267258-27267277 None:intergenic 20.0%
!!! TTTTCTCTTTTTTTGTTTCA+AGG - Chr5:27266588-27266607 MsG0580025931.01.T01:CDS 20.0%
! AAAAAACGATAACAAATGAG+GGG + Chr5:27265135-27265154 None:intergenic 25.0%
! AAAAGGAATAAAAAACATCG+GGG + Chr5:27266747-27266766 None:intergenic 25.0%
! AAAATCAAAATATTCCGAGT+TGG - Chr5:27265639-27265658 MsG0580025931.01.T01:intron 25.0%
! AAATATGAGTACATGAGTAT+AGG - Chr5:27266834-27266853 MsG0580025931.01.T01:CDS 25.0%
! AAATCAAAATATTCCGAGTT+GGG - Chr5:27265640-27265659 MsG0580025931.01.T01:intron 25.0%
! AAGTGCATTATGTATTAATG+AGG - Chr5:27267134-27267153 MsG0580025931.01.T01:CDS 25.0%
! ACTATCTATCTTATTGATGA+AGG - Chr5:27265732-27265751 MsG0580025931.01.T01:CDS 25.0%
! AGCATCAAATAACACAAAAA+TGG + Chr5:27266435-27266454 None:intergenic 25.0%
! ATCAACCTAAAACATTTAGA+AGG + Chr5:27265942-27265961 None:intergenic 25.0%
! CTAAAAAACGATAACAAATG+AGG + Chr5:27265137-27265156 None:intergenic 25.0%
! GATCAATTGCAATCTTTAAT+TGG - Chr5:27265573-27265592 MsG0580025931.01.T01:intron 25.0%
! TCAACCTAAAACATTTAGAA+GGG + Chr5:27265941-27265960 None:intergenic 25.0%
! TGACTCTTATATCTTTGAAT+AGG - Chr5:27267322-27267341 MsG0580025931.01.T01:intron 25.0%
! TGAGTTAAATAACGTGAAAA+TGG + Chr5:27264720-27264739 None:intergenic 25.0%
! TTCTTTCTATGATTCTATGT+TGG - Chr5:27267420-27267439 MsG0580025931.01.T01:intron 25.0%
! TTTGTGAATTCAAAATCAGT+GGG + Chr5:27267527-27267546 None:intergenic 25.0%
!! ATGTTAATTTTTCCCTGAAT+TGG - Chr5:27267466-27267485 MsG0580025931.01.T01:intron 25.0%
!! ATGTTTTTCATATTGTTTCG+AGG - Chr5:27266261-27266280 MsG0580025931.01.T01:intron 25.0%
!! ATTTCCCTTCTAAATGTTTT+AGG - Chr5:27265934-27265953 MsG0580025931.01.T01:intron 25.0%
!!! AATTTTAGGTACAAAGTCAA+AGG - Chr5:27266382-27266401 MsG0580025931.01.T01:CDS 25.0%
!!! GAAGATGTCAATTATTTTGA+TGG - Chr5:27267553-27267572 MsG0580025931.01.T01:CDS 25.0%
!!! GTCAATTATTTTGATGGATT+TGG - Chr5:27267559-27267578 MsG0580025931.01.T01:CDS 25.0%
!!! TGTGTGTTTTGAATACAAAT+TGG - Chr5:27267157-27267176 MsG0580025931.01.T01:CDS 25.0%
AAAAGTCTTAGATAGAAGTC+TGG + Chr5:27264762-27264781 None:intergenic 30.0%
AACAAAACAACCAAACTCAA+AGG + Chr5:27264836-27264855 None:intergenic 30.0%
AACATAAGTTTGTAGGAATG+AGG + Chr5:27265068-27265087 None:intergenic 30.0%
AAGAACTATGTGAATGTATG+TGG - Chr5:27266939-27266958 MsG0580025931.01.T01:intron 30.0%
AATTATGCTGACATCAAAAG+GGG + Chr5:27264648-27264667 None:intergenic 30.0%
ACAAAACAACCAAACTCAAA+GGG + Chr5:27264835-27264854 None:intergenic 30.0%
ACACATATCTTGCAAAAATG+CGG + Chr5:27266236-27266255 None:intergenic 30.0%
ATACCTGTTTAGTAGTGTTT+GGG - Chr5:27266323-27266342 MsG0580025931.01.T01:intron 30.0%
ATTTGATCCATGTGGAATAA+GGG - Chr5:27264915-27264934 MsG0580025931.01.T01:CDS 30.0%
CAATAAGGATTGATTAAAGC+TGG - Chr5:27266352-27266371 MsG0580025931.01.T01:CDS 30.0%
CAATTATGCTGACATCAAAA+GGG + Chr5:27264649-27264668 None:intergenic 30.0%
CATAATTGAGTCACTAGAAA+TGG - Chr5:27264661-27264680 MsG0580025931.01.T01:intron 30.0%
CTCTTATATCTTTGAATAGG+AGG - Chr5:27267325-27267344 MsG0580025931.01.T01:intron 30.0%
CTTTCTCATGTGAATATATG+CGG - Chr5:27266885-27266904 MsG0580025931.01.T01:intron 30.0%
CTTTGTGAATTCAAAATCAG+TGG + Chr5:27267528-27267547 None:intergenic 30.0%
GACCTAATCTGAACAAATAA+AGG + Chr5:27265983-27266002 None:intergenic 30.0%
GACTGGAAATGTTAAATCAA+TGG + Chr5:27264809-27264828 None:intergenic 30.0%
GATGTTATTGGATTTCTCAT+TGG - Chr5:27265327-27265346 MsG0580025931.01.T01:intron 30.0%
TAAATCAATGGCAAATTGCA+TGG + Chr5:27264797-27264816 None:intergenic 30.0%
TAAATGCTACAATCGAAGAT+GGG - Chr5:27266111-27266130 MsG0580025931.01.T01:intron 30.0%
TACACATTCAAATTTACCAC+TGG + Chr5:27265535-27265554 None:intergenic 30.0%
TATACCTGTTTAGTAGTGTT+TGG - Chr5:27266322-27266341 MsG0580025931.01.T01:intron 30.0%
TATTTGATCCATGTGGAATA+AGG - Chr5:27264914-27264933 MsG0580025931.01.T01:CDS 30.0%
TCAATTATGCTGACATCAAA+AGG + Chr5:27264650-27264669 None:intergenic 30.0%
TGAATACAAATTGGCTGAAT+AGG - Chr5:27267166-27267185 MsG0580025931.01.T01:CDS 30.0%
TTAGTTAACTTAGGTACCTT+AGG - Chr5:27267061-27267080 MsG0580025931.01.T01:CDS 30.0%
TTTCATATTGTTTCGAGGTT+AGG - Chr5:27266266-27266285 MsG0580025931.01.T01:intron 30.0%
! AAGCTGGAATATGCAATTTT+AGG - Chr5:27266368-27266387 MsG0580025931.01.T01:CDS 30.0%
! CAACGATGGTTCAAATTTTT+AGG - Chr5:27264606-27264625 MsG0580025931.01.T01:CDS 30.0%
! CTGATTTTGAATTCACAAAG+CGG - Chr5:27267528-27267547 MsG0580025931.01.T01:CDS 30.0%
! GAGGTTAGCATTTTATTGAT+TGG - Chr5:27266506-27266525 MsG0580025931.01.T01:CDS 30.0%
! GTCCTTTATTTGTTCAGATT+AGG - Chr5:27265978-27265997 MsG0580025931.01.T01:CDS 30.0%
! TGATTTTGAATTCACAAAGC+GGG - Chr5:27267529-27267548 MsG0580025931.01.T01:CDS 30.0%
! TTTTTAAATTCCTCCACTTC+AGG + Chr5:27265816-27265835 None:intergenic 30.0%
!! GCATTTTATTGATTGGACTA+TGG - Chr5:27266513-27266532 MsG0580025931.01.T01:CDS 30.0%
!! TCAAATTTTTAGGCTATGGA+AGG - Chr5:27264616-27264635 MsG0580025931.01.T01:CDS 30.0%
!! TGGTTCAAATTTTTAGGCTA+TGG - Chr5:27264612-27264631 MsG0580025931.01.T01:CDS 30.0%
!!! AATGGTTTTTGTTGATGACA+AGG - Chr5:27264679-27264698 MsG0580025931.01.T01:intron 30.0%
!!! TCTTATTTGTTGTTTTCCAG+TGG - Chr5:27265516-27265535 MsG0580025931.01.T01:CDS 30.0%
!!! TGAGTTTGGTTGTTTTGTTT+CGG - Chr5:27264837-27264856 MsG0580025931.01.T01:intron 30.0%
AAAAGCAAATGAATCTCACG+AGG + Chr5:27267388-27267407 None:intergenic 35.0%
AAAGCAAATGAATCTCACGA+GGG + Chr5:27267387-27267406 None:intergenic 35.0%
ACATCACACAAACCTTTAAG+TGG + Chr5:27264563-27264582 None:intergenic 35.0%
CAAAACAACCAAACTCAAAG+GGG + Chr5:27264834-27264853 None:intergenic 35.0%
CAATACAAACGAAATCCATC+AGG + Chr5:27266301-27266320 None:intergenic 35.0%
CACTTGGAACATAAGTTTGT+AGG + Chr5:27265075-27265094 None:intergenic 35.0%
CATTGGTATATCTACTACGA+GGG - Chr5:27265344-27265363 MsG0580025931.01.T01:intron 35.0%
CTAAATGCTACAATCGAAGA+TGG - Chr5:27266110-27266129 MsG0580025931.01.T01:intron 35.0%
CTCTAACTTTGTTACCTATC+CGG - Chr5:27265857-27265876 MsG0580025931.01.T01:intron 35.0%
CTCTATCCTTAGCATATTCA+AGG + Chr5:27266865-27266884 None:intergenic 35.0%
CTGCTAATATTTGATCCATG+TGG - Chr5:27264907-27264926 MsG0580025931.01.T01:CDS 35.0%
CTTGAACATGACTTCTTAGT+TGG - Chr5:27265182-27265201 MsG0580025931.01.T01:intron 35.0%
GGAGTAACTCAAATCTTTGT+TGG + Chr5:27266017-27266036 None:intergenic 35.0%
TACTACGAGGGAATACATTA+AGG - Chr5:27265356-27265375 MsG0580025931.01.T01:intron 35.0%
TATGAGTATAATGCCCAACT+CGG + Chr5:27265656-27265675 None:intergenic 35.0%
TATTGATGAAGGATATCCCT+CGG - Chr5:27265743-27265762 MsG0580025931.01.T01:CDS 35.0%
TCAATGATGCTAGGTGATTT+CGG - Chr5:27265412-27265431 MsG0580025931.01.T01:intron 35.0%
TCATTGGTATATCTACTACG+AGG - Chr5:27265343-27265362 MsG0580025931.01.T01:intron 35.0%
TGAAAAATCTGAGAATGCTC+TGG - Chr5:27265106-27265125 MsG0580025931.01.T01:intron 35.0%
TGAAATCAAAGAATTGGACC+TGG - Chr5:27267268-27267287 MsG0580025931.01.T01:intron 35.0%
TGGTGATATTCATAGCACTT+TGG + Chr5:27265770-27265789 None:intergenic 35.0%
TTAATTGGAAAGCCTGTTGA+AGG - Chr5:27265588-27265607 MsG0580025931.01.T01:intron 35.0%
TTCAAAGCTTCAAACTCACA+TGG + Chr5:27266634-27266653 None:intergenic 35.0%
TTCTATGTTGTTCCAGCAAA+TGG - Chr5:27265026-27265045 MsG0580025931.01.T01:intron 35.0%
TTTACAACCCTTATTCCACA+TGG + Chr5:27264925-27264944 None:intergenic 35.0%
! AAAGTGCTATGAATATCACC+AGG - Chr5:27265769-27265788 MsG0580025931.01.T01:CDS 35.0%
! AAGATTTGAGTTACTCCGAT+CGG - Chr5:27266020-27266039 MsG0580025931.01.T01:CDS 35.0%
! ACTTGCTTATATTTCTGCGT+CGG - Chr5:27266802-27266821 MsG0580025931.01.T01:CDS 35.0%
! ATGTGAGTTTGAAGCTTTGA+AGG - Chr5:27266633-27266652 MsG0580025931.01.T01:intron 35.0%
! GAGCTCAAGCATACATATTT+TGG + Chr5:27265394-27265413 None:intergenic 35.0%
!! AGCTTTGAAGGACAAACAAT+TGG - Chr5:27266645-27266664 MsG0580025931.01.T01:intron 35.0%
!! TACTGCTCAGGTTGATATTA+AGG - Chr5:27267202-27267221 MsG0580025931.01.T01:CDS 35.0%
!! TCAGGTTGATATTAAGGATG+AGG - Chr5:27267208-27267227 MsG0580025931.01.T01:CDS 35.0%
AAACAGATGCAGCAACTCTT+TGG + Chr5:27264964-27264983 None:intergenic 40.0%
AAACCACGATGGTTCTTACA+AGG - Chr5:27266702-27266721 MsG0580025931.01.T01:intron 40.0%
AACAGATGCAGCAACTCTTT+GGG + Chr5:27264963-27264982 None:intergenic 40.0%
AAGCAAATGAATCTCACGAG+GGG + Chr5:27267386-27267405 None:intergenic 40.0%
AATTCAAAATCAGTGGGTCC+TGG + Chr5:27267521-27267540 None:intergenic 40.0%
ACAACTGGAAAACCTTCAAC+AGG + Chr5:27265603-27265622 None:intergenic 40.0%
ACAATTACCCAAGCTACCTA+AGG + Chr5:27267080-27267099 None:intergenic 40.0%
ACGAGGGAATACATTAAGGA+TGG - Chr5:27265360-27265379 MsG0580025931.01.T01:intron 40.0%
AGCTGATATTATTCCGTCCA+AGG - Chr5:27267601-27267620 MsG0580025931.01.T01:CDS 40.0%
AGTTGCTGCATCTGTTTGAA+GGG - Chr5:27264967-27264986 MsG0580025931.01.T01:CDS 40.0%
ATGGTTCTTACAAGGTCAAG+GGG - Chr5:27266710-27266729 MsG0580025931.01.T01:intron 40.0%
CAATTAGGCAGAATATGTCG+AGG + Chr5:27265681-27265700 None:intergenic 40.0%
CATTCTCATGCAATAAGCAC+CGG + Chr5:27265879-27265898 None:intergenic 40.0%
CTAAGAAGTCATGTTCAAGC+TGG + Chr5:27265181-27265200 None:intergenic 40.0%
GAACCCAAACACTACTAAAC+AGG + Chr5:27266329-27266348 None:intergenic 40.0%
GATGGTTCTTACAAGGTCAA+GGG - Chr5:27266709-27266728 MsG0580025931.01.T01:intron 40.0%
GCAAGCTCAATTACAACAAC+TGG + Chr5:27265618-27265637 None:intergenic 40.0%
GGCTGAATAGGTTAAGTCTA+GGG - Chr5:27267178-27267197 MsG0580025931.01.T01:CDS 40.0%
GTCAAGGGATTGAATATACG+CGG - Chr5:27266991-27267010 MsG0580025931.01.T01:CDS 40.0%
GTGAAGCCTTGAATATGCTA+AGG - Chr5:27266856-27266875 MsG0580025931.01.T01:intron 40.0%
GTGAGGATTCATTGAAATCC+TGG + Chr5:27265790-27265809 None:intergenic 40.0%
GTTTCAAGGCAAGAAATGCA+GGG - Chr5:27266602-27266621 MsG0580025931.01.T01:CDS 40.0%
TATGTTCCAAGTGAACACAG+TGG - Chr5:27265082-27265101 MsG0580025931.01.T01:intron 40.0%
TCACACAAACCTTTAAGTGG+TGG + Chr5:27264560-27264579 None:intergenic 40.0%
TCACCAATGATTGATGAACC+AGG + Chr5:27267289-27267308 None:intergenic 40.0%
TGGCTGAATAGGTTAAGTCT+AGG - Chr5:27267177-27267196 MsG0580025931.01.T01:CDS 40.0%
TGTTTCAAGGCAAGAAATGC+AGG - Chr5:27266601-27266620 MsG0580025931.01.T01:CDS 40.0%
TTAGGTACCTTAGGTAGCTT+GGG - Chr5:27267070-27267089 MsG0580025931.01.T01:CDS 40.0%
TTATAGACAATCTGCGCATG+TGG + Chr5:27265910-27265929 None:intergenic 40.0%
TTGTAAGAACCATCGTGGTT+TGG + Chr5:27266703-27266722 None:intergenic 40.0%
TTTCAAATCCAGACACTTCC+AGG - Chr5:27267500-27267519 MsG0580025931.01.T01:CDS 40.0%
TTTCAACCACTGTGTTCACT+TGG + Chr5:27265091-27265110 None:intergenic 40.0%
! AAGAAGTGTGCAAGTTTGGT+TGG - Chr5:27266476-27266495 MsG0580025931.01.T01:CDS 40.0%
! AGCTCAGCTACTGTTTTCTT+TGG + Chr5:27266092-27266111 None:intergenic 40.0%
! ATCAGCTTTATATGCCTCCA+TGG + Chr5:27267588-27267607 None:intergenic 40.0%
! CAAGAAGAAGTGTGCAAGTT+TGG - Chr5:27266472-27266491 MsG0580025931.01.T01:CDS 40.0%
! TAAGGATGAGGTTTTGCCTA+TGG - Chr5:27267220-27267239 MsG0580025931.01.T01:CDS 40.0%
!! GTTAGGTGTTTTGTTCCTGA+TGG - Chr5:27266283-27266302 MsG0580025931.01.T01:intron 40.0%
!! TTTGATGGATTTGGACACCA+TGG - Chr5:27267568-27267587 MsG0580025931.01.T01:CDS 40.0%
AACAACCAAACTCAAAGGGG+CGG + Chr5:27264831-27264850 None:intergenic 45.0%
AGCTGGCAACGACAAATTTC+AGG + Chr5:27265164-27265183 None:intergenic 45.0%
AGGTACAAAGTCAAAGGCGA+TGG - Chr5:27266388-27266407 MsG0580025931.01.T01:CDS 45.0%
ATTCATAGCACTTTGGACCG+AGG + Chr5:27265763-27265782 None:intergenic 45.0%
CGATGGTTCTTACAAGGTCA+AGG - Chr5:27266708-27266727 MsG0580025931.01.T01:intron 45.0%
CTTAGGTACCTTAGGTAGCT+TGG - Chr5:27267069-27267088 MsG0580025931.01.T01:CDS 45.0%
GAATCCTCACATTCCTGAAG+TGG - Chr5:27265800-27265819 MsG0580025931.01.T01:intron 45.0%
GAGTTGCTGCATCTGTTTGA+AGG - Chr5:27264966-27264985 MsG0580025931.01.T01:CDS 45.0%
GATCCTATAGACATCACCCT+CGG + Chr5:27265000-27265019 None:intergenic 45.0%
GGACCTGGTTCATCAATCAT+TGG - Chr5:27267283-27267302 MsG0580025931.01.T01:intron 45.0%
GGACTTGTAGCTTGAAGAAC+AGG + Chr5:27267365-27267384 None:intergenic 45.0%
GGTTTGTGTGATGTTGTTCC+TGG - Chr5:27264569-27264588 MsG0580025931.01.T01:CDS 45.0%
TAAGTCTAGGGATACTGCTC+AGG - Chr5:27267190-27267209 MsG0580025931.01.T01:CDS 45.0%
TACAAAGTCAAAGGCGATGG+TGG - Chr5:27266391-27266410 MsG0580025931.01.T01:CDS 45.0%
TCTGCAAATCCAAACCACGA+TGG - Chr5:27266691-27266710 MsG0580025931.01.T01:intron 45.0%
TGACCTTGTAAGAACCATCG+TGG + Chr5:27266708-27266727 None:intergenic 45.0%
TGCTGCAACTCTTGAGCTTT+GGG + Chr5:27266046-27266065 None:intergenic 45.0%
TGCTTGAGCTCAATGATGCT+AGG - Chr5:27265403-27265422 MsG0580025931.01.T01:intron 45.0%
TTCATAGCACTTTGGACCGA+GGG + Chr5:27265762-27265781 None:intergenic 45.0%
TTCCAGCAAATGGACGATAC+AGG - Chr5:27265036-27265055 MsG0580025931.01.T01:intron 45.0%
! AAGTTTGGTTGGTGTAGCTG+AGG - Chr5:27266487-27266506 MsG0580025931.01.T01:CDS 45.0%
! GATGAGGTTTTGCCTATGGA+GGG - Chr5:27267224-27267243 MsG0580025931.01.T01:CDS 45.0%
! GTGTTTGGGTTCGCTCAATA+AGG - Chr5:27266337-27266356 MsG0580025931.01.T01:intron 45.0%
! TCATTGGTGACAAAACGCAG+AGG - Chr5:27267299-27267318 MsG0580025931.01.T01:intron 45.0%
!! AATCGAAGATGGGTTGTACG+TGG - Chr5:27266121-27266140 MsG0580025931.01.T01:intron 45.0%
!! TCATGCAATAAGCACCGGAT+AGG + Chr5:27265874-27265893 None:intergenic 45.0%
ACAGCTTCACCCAAGAGTGA+AGG + Chr5:27266973-27266992 None:intergenic 50.0%
ACTCTTGGGTGAAGCTGTCA+AGG - Chr5:27266975-27266994 MsG0580025931.01.T01:intron 50.0%
AGCTCTTGCATGGTCAACGA+TGG - Chr5:27264592-27264611 MsG0580025931.01.T01:CDS 50.0%
CGTTTGGTAGGTTGTGCTGA+AGG - Chr5:27266152-27266171 MsG0580025931.01.T01:intron 50.0%
CTCTTGGGTGAAGCTGTCAA+GGG - Chr5:27266976-27266995 MsG0580025931.01.T01:intron 50.0%
CTGCTGCAACTCTTGAGCTT+TGG + Chr5:27266047-27266066 None:intergenic 50.0%
GCATCTGTTTGAAGGGAAGG+TGG - Chr5:27264974-27264993 MsG0580025931.01.T01:CDS 50.0%
GCTGCATCTGTTTGAAGGGA+AGG - Chr5:27264971-27264990 MsG0580025931.01.T01:CDS 50.0%
GTACGTGGTTCATGCACGTT+TGG - Chr5:27266136-27266155 MsG0580025931.01.T01:intron 50.0%
GTCCTGTATCGTCCATTTGC+TGG + Chr5:27265041-27265060 None:intergenic 50.0%
GTGGTTCATGCACGTTTGGT+AGG - Chr5:27266140-27266159 MsG0580025931.01.T01:intron 50.0%
GTGTGTCACAAGTCGTTGTC+TGG - Chr5:27266200-27266219 MsG0580025931.01.T01:intron 50.0%
GTTTGTGCGCCTTCACTCTT+GGG - Chr5:27266961-27266980 MsG0580025931.01.T01:intron 50.0%
TCCTCACATTCCTGAAGTGG+AGG - Chr5:27265803-27265822 MsG0580025931.01.T01:intron 50.0%
TCCTCCACTTCAGGAATGTG+AGG + Chr5:27265807-27265826 None:intergenic 50.0%
TGCTGACATCAAAAGGGGCA+TGG + Chr5:27264643-27264662 None:intergenic 50.0%
TGGTAGGTTGTGCTGAAGGT+GGG - Chr5:27266156-27266175 MsG0580025931.01.T01:intron 50.0%
TTGGCAGTATGTCCCTCCAT+AGG + Chr5:27267239-27267258 None:intergenic 50.0%
TTGGTAGGTTGTGCTGAAGG+TGG - Chr5:27266155-27266174 MsG0580025931.01.T01:intron 50.0%
TTGTTCCTGGAGCTCTTGCA+TGG - Chr5:27264582-27264601 MsG0580025931.01.T01:CDS 50.0%
! GATGGATTTGGACACCATGG+AGG - Chr5:27267571-27267590 MsG0580025931.01.T01:CDS 50.0%
! GGATGAGGTTTTGCCTATGG+AGG - Chr5:27267223-27267242 MsG0580025931.01.T01:CDS 50.0%
!! CAAAGGCGATGGTGGATGAT+GGG - Chr5:27266399-27266418 MsG0580025931.01.T01:CDS 50.0%
!! TCAAAGGCGATGGTGGATGA+TGG - Chr5:27266398-27266417 MsG0580025931.01.T01:CDS 50.0%
GGTAGGTTGTGCTGAAGGTG+GGG - Chr5:27266157-27266176 MsG0580025931.01.T01:intron 55.0%
GGTTTGTGCGCCTTCACTCT+TGG - Chr5:27266960-27266979 MsG0580025931.01.T01:intron 55.0%
GTTGACCATGCAAGAGCTCC+AGG + Chr5:27264590-27264609 None:intergenic 55.0%
GTTGTGCTGAAGGTGGGGAT+TGG - Chr5:27266162-27266181 MsG0580025931.01.T01:intron 55.0%
TGGCCGAGGGTGATGTCTAT+AGG - Chr5:27264994-27265013 MsG0580025931.01.T01:intron 55.0%
TTTGAAGGGAAGGTGGCCGA+GGG - Chr5:27264981-27265000 MsG0580025931.01.T01:intron 55.0%
!! CTCTTGAGCTTTGGGCCGAT+CGG + Chr5:27266038-27266057 None:intergenic 55.0%
CCAAACTCAAAGGGGCGGAC+TGG + Chr5:27264826-27264845 None:intergenic 60.0%
GTGCTGAAGGTGGGGATTGG+TGG - Chr5:27266165-27266184 MsG0580025931.01.T01:intron 60.0%
GTTTGAAGGGAAGGTGGCCG+AGG - Chr5:27264980-27264999 MsG0580025931.01.T01:intron 60.0%
! CCAGTCCGCCCCTTTGAGTT+TGG - Chr5:27264823-27264842 MsG0580025931.01.T01:intron 60.0%
!! CAGTGGGTCCTGGAAGTGTC+TGG + Chr5:27267511-27267530 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 27264551 27267634 27264551 ID=MsG0580025931.01;Name=MsG0580025931.01
Chr5 mRNA 27264551 27267634 27264551 ID=MsG0580025931.01.T01;Parent=MsG0580025931.01;Name=MsG0580025931.01.T01;_AED=0.58;_eAED=0.63;_QI=0|0|0|0.66|1|1|9|0|484
Chr5 exon 27267485 27267634 27267485 ID=MsG0580025931.01.T01:exon:29267;Parent=MsG0580025931.01.T01
Chr5 exon 27266982 27267249 27266982 ID=MsG0580025931.01.T01:exon:29268;Parent=MsG0580025931.01.T01
Chr5 exon 27266761 27266857 27266761 ID=MsG0580025931.01.T01:exon:29269;Parent=MsG0580025931.01.T01
Chr5 exon 27266347 27266649 27266347 ID=MsG0580025931.01.T01:exon:29270;Parent=MsG0580025931.01.T01
Chr5 exon 27265955 27266118 27265955 ID=MsG0580025931.01.T01:exon:29271;Parent=MsG0580025931.01.T01
Chr5 exon 27265677 27265795 27265677 ID=MsG0580025931.01.T01:exon:29272;Parent=MsG0580025931.01.T01
Chr5 exon 27265462 27265575 27265462 ID=MsG0580025931.01.T01:exon:29273;Parent=MsG0580025931.01.T01
Chr5 exon 27264881 27264997 27264881 ID=MsG0580025931.01.T01:exon:29274;Parent=MsG0580025931.01.T01
Chr5 exon 27264551 27264673 27264551 ID=MsG0580025931.01.T01:exon:29275;Parent=MsG0580025931.01.T01
Chr5 CDS 27267485 27267634 27267485 ID=MsG0580025931.01.T01:cds;Parent=MsG0580025931.01.T01
Chr5 CDS 27266982 27267249 27266982 ID=MsG0580025931.01.T01:cds;Parent=MsG0580025931.01.T01
Chr5 CDS 27266761 27266857 27266761 ID=MsG0580025931.01.T01:cds;Parent=MsG0580025931.01.T01
Chr5 CDS 27266347 27266649 27266347 ID=MsG0580025931.01.T01:cds;Parent=MsG0580025931.01.T01
Chr5 CDS 27265955 27266118 27265955 ID=MsG0580025931.01.T01:cds;Parent=MsG0580025931.01.T01
Chr5 CDS 27265677 27265795 27265677 ID=MsG0580025931.01.T01:cds;Parent=MsG0580025931.01.T01
Chr5 CDS 27265462 27265575 27265462 ID=MsG0580025931.01.T01:cds;Parent=MsG0580025931.01.T01
Chr5 CDS 27264881 27264997 27264881 ID=MsG0580025931.01.T01:cds;Parent=MsG0580025931.01.T01
Chr5 CDS 27264551 27264673 27264551 ID=MsG0580025931.01.T01:cds;Parent=MsG0580025931.01.T01
Gene Sequence

>MsG0580025931.01.T01

ATGGATCCACCACTTAAAGGTTTGTGTGATGTTGTTCCTGGAGCTCTTGCATGGTCAACGATGGTTCAAATTTTTAGGCTATGGAAGGTCCATGCCCCTTTTGATGTCAGCATAATTGAGTCACTAGAAATGGTTTTTGTTGATGACAAGGGTTGTAAAATTCATGCAACTGTACCCAAAGAGTTGCTGCATCTGTTTGAAGGGAAGGTGGCCGAGGGTGATGTCTATAGGATCTTCAACTTCTATGTTGTTCCAGCAAATGGACGATACAGGACAACACCTCATTCCTACAAACTTATGTTCCAAGTGAACACAGTGGTTGAAAAATCTGAGAATGCTCTGGTCACCCCTCATTTGTTATCGTTTTTTAGATCACCTGAAATTTGTCGTTGCCAGCTTGAACATGACTTCTTAGTTGATGTTATTGGATTTCTCATTGGTATATCTACTACGAGGGAATACATTAAGGATGGTAAAATCACCAAAATATGTATGCTTGAGCTCAATGATGCTAGTGGTAAATTTGAATGTGTATTGTTTGGTGAATATGTTGATCAATTGCAATCTTTAATTGGAAAGCCTGTTGAAGGTTTTCCAGTTGTTGTAATTGAGCTTGCAAAAATCAAAATATTCCGAGTTGGGCATTATACTCATATACCTCGACATATTCTGCCTAATTGTTTGTTTTATTTGTGTGGATTGCTATTTTTTACTATCTATCTTATTGATGAAGGATATCCCTCGGTCCAAAGTGCTATGAATATCACCAGGATTTCAATGAATCCTCACATTCCTGAAGTGGAGGAATTTAAAAAAGAAGTTGATTTCATGCACAACTATCCAAAGAAAACAGTAGCTGAGCTAAATGCTACAATCGAAGATGGGTTGTACGTGGTTCATGCACGTTTGGTAGGTTGTGCTGAAGGTGGGGATTGGTGGTATGCATCTTGTGTGTGTCACAAGTCGTTGTCTGGTGATTCGAGTACAAAGTCAAAGGCGATGGTGGATGATGGGACTGATGATGCCATTTTTGTGTTATTTGATGCTGATGTCAATCGTTTTGTCAAGAAGAAGTGTGCAAGTTTGGTTGGTGTAGCTGAGGCAAGAAATGCAGGGTTTTGTCCATGTGAGTTTGAAGCTTTGAAGGACAAACAATTGGTGTTTATTGTTGAGAAGAAAACATCTGCAAATCCAAACCACGATGGTTCTTACAAGGTTAAGTCTAGGGATACTGCTCAGGTTGATATTAAGGATGAGGTTTTGCCTATGGAGGGACATACTGCCAATCATAAAGATGAAATCAAAGAATTGGACCTGGTTCATCAATCATTGACACTTCCAGGACCCACTGATTTTGAATTCACAAAGCGGGAGAAGATGTCAATTATTTTGATGGATTTGGACACCATGGAGGCATATAAAGCTGATATTATTCCGTCCAAGGATAAAAATTAG
Protein sequence

>MsG0580025931.01.T01

MDPPLKGLCDVVPGALAWSTMVQIFRLWKVHAPFDVSIIESLEMVFVDDKGCKIHATVPKELLHLFEGKVAEGDVYRIFNFYVVPANGRYRTTPHSYKLMFQVNTVVEKSENALVTPHLLSFFRSPEICRCQLEHDFLVDVIGFLIGISTTREYIKDGKITKICMLELNDASGKFECVLFGEYVDQLQSLIGKPVEGFPVVVIELAKIKIFRVGHYTHIPRHILPNCLFYLCGLLFFTIYLIDEGYPSVQSAMNITRISMNPHIPEVEEFKKEVDFMHNYPKKTVAELNATIEDGLYVVHARLVGCAEGGDWWYASCVCHKSLSGDSSTKSKAMVDDGTDDAIFVLFDADVNRFVKKKCASLVGVAEARNAGFCPCEFEALKDKQLVFIVEKKTSANPNHDGSYKVKSRDTAQVDIKDEVLPMEGHTANHKDEIKELDLVHQSLTLPGPTDFEFTKREKMSIILMDLDTMEAYKADIIPSKDKN*