Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014867.01.T01 | KEH34370.1 | 93.007 | 143 | 10 | 0 | 1 | 143 | 1 | 143 | 3.86E-91 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014867.01.T01 | Q9FJK3 | 46.825 | 126 | 62 | 3 | 4 | 127 | 32 | 154 | 4.72E-30 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014867.01.T01 | A0A072V8A1 | 93.007 | 143 | 10 | 0 | 1 | 143 | 1 | 143 | 1.84e-91 | 271 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380014867.01.T01 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180002195.01 | MsG0380014867.01 | 0.812333 | 4.469563e-51 | 2.833994e-48 |
| MsG0180002667.01 | MsG0380014867.01 | 0.804603 | 1.995709e-49 | 1.033380e-46 |
| MsG0380011759.01 | MsG0380014867.01 | 0.824723 | 6.916663e-54 | 6.177806e-51 |
| MsG0380013596.01 | MsG0380014867.01 | 0.824558 | 7.563937e-54 | 6.723367e-51 |
| MsG0380014867.01 | MsG0380017821.01 | 0.804538 | 2.058573e-49 | 1.064121e-46 |
| MsG0380014867.01 | MsG0380017822.01 | 0.804943 | 1.694802e-49 | 8.853621e-47 |
| MsG0380014867.01 | MsG0580025931.01 | 0.801096 | 1.058006e-48 | 5.009582e-46 |
| MsG0380014867.01 | MsG0580026222.01 | 0.800788 | 1.222727e-48 | 5.743945e-46 |
| MsG0380014867.01 | MsG0580026276.01 | 0.803162 | 3.976336e-49 | 1.984097e-46 |
| MsG0380014867.01 | MsG0580026434.01 | 0.815176 | 1.057361e-51 | 7.237138e-49 |
| MsG0380014867.01 | MsG0580027332.01 | 0.844146 | 9.054398e-59 | 1.448524e-55 |
| MsG0380014867.01 | MsG0580029204.01 | 0.807092 | 5.985467e-50 | 3.303858e-47 |
| MsG0380014867.01 | MsG0580029381.01 | 0.808560 | 2.916608e-50 | 1.672966e-47 |
| MsG0380014867.01 | MsG0680032844.01 | 0.814146 | 1.786965e-51 | 1.189592e-48 |
| MsG0380014867.01 | MsG0680035896.01 | 0.819394 | 1.188394e-52 | 9.133421e-50 |
| MsG0380014867.01 | MsG0780036498.01 | 0.839709 | 1.346948e-57 | 1.875596e-54 |
| MsG0380014867.01 | MsG0780039282.01 | 0.818893 | 1.545027e-52 | 1.171227e-49 |
| MsG0380014867.01 | MsG0880041916.01 | 0.815922 | 7.212773e-52 | 5.038990e-49 |
| MsG0380014867.01 | MsG0880042454.01 | 0.807634 | 4.592903e-50 | 2.571199e-47 |
| MsG0380014867.01 | MsG0880044644.01 | 0.831210 | 1.899418e-55 | 2.047221e-52 |
| MsG0280006551.01 | MsG0380014867.01 | 0.804177 | 2.448580e-49 | 1.254029e-46 |
| MsG0280008759.01 | MsG0380014867.01 | 0.810594 | 1.066663e-50 | 6.456490e-48 |
| MsG0280009371.01 | MsG0380014867.01 | 0.819372 | 1.202436e-52 | 9.235306e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014867.01.T01 | MTR_3g465410 | 93.007 | 143 | 10 | 0 | 1 | 143 | 1 | 143 | 4.67e-95 | 271 |
| MsG0380014867.01.T01 | MTR_4g063790 | 91.608 | 143 | 12 | 0 | 1 | 143 | 29 | 171 | 1.30e-92 | 265 |
| MsG0380014867.01.T01 | MTR_3g467080 | 78.195 | 133 | 29 | 0 | 1 | 133 | 29 | 161 | 2.48e-70 | 209 |
| MsG0380014867.01.T01 | MTR_3g466980 | 49.306 | 144 | 70 | 2 | 1 | 142 | 29 | 171 | 2.61e-42 | 140 |
| MsG0380014867.01.T01 | MTR_3g031240 | 47.407 | 135 | 71 | 0 | 1 | 135 | 29 | 163 | 2.83e-38 | 128 |
| MsG0380014867.01.T01 | MTR_3g065100 | 47.244 | 127 | 66 | 1 | 4 | 130 | 32 | 157 | 2.32e-36 | 125 |
| MsG0380014867.01.T01 | MTR_2g016210 | 43.885 | 139 | 78 | 0 | 1 | 139 | 29 | 167 | 7.38e-36 | 124 |
| MsG0380014867.01.T01 | MTR_3g031100 | 42.446 | 139 | 80 | 0 | 1 | 139 | 29 | 167 | 3.46e-33 | 117 |
| MsG0380014867.01.T01 | MTR_5g075380 | 40.909 | 132 | 71 | 2 | 1 | 129 | 29 | 156 | 4.02e-32 | 112 |
| MsG0380014867.01.T01 | MTR_4g032620 | 39.416 | 137 | 83 | 0 | 1 | 137 | 29 | 165 | 1.03e-31 | 113 |
| MsG0380014867.01.T01 | MTR_4g032290 | 40.299 | 134 | 80 | 0 | 4 | 137 | 32 | 165 | 4.43e-31 | 111 |
| MsG0380014867.01.T01 | MTR_2g035580 | 47.200 | 125 | 65 | 1 | 2 | 126 | 30 | 153 | 1.00e-29 | 105 |
| MsG0380014867.01.T01 | MTR_4g031910 | 38.806 | 134 | 82 | 0 | 4 | 137 | 32 | 165 | 6.57e-29 | 105 |
| MsG0380014867.01.T01 | MTR_4g032260 | 35.938 | 128 | 82 | 0 | 4 | 131 | 32 | 159 | 9.00e-28 | 100 |
| MsG0380014867.01.T01 | MTR_8g036130 | 39.189 | 148 | 79 | 2 | 1 | 137 | 29 | 176 | 4.87e-27 | 101 |
| MsG0380014867.01.T01 | MTR_2g035610 | 46.512 | 86 | 46 | 0 | 4 | 89 | 32 | 117 | 2.95e-25 | 93.6 |
| MsG0380014867.01.T01 | MTR_5g047580 | 38.095 | 126 | 76 | 2 | 1 | 126 | 29 | 152 | 6.57e-23 | 88.6 |
| MsG0380014867.01.T01 | MTR_1g077320 | 36.719 | 128 | 79 | 2 | 4 | 131 | 32 | 157 | 2.08e-22 | 87.4 |
| MsG0380014867.01.T01 | MTR_1g077300 | 35.385 | 130 | 80 | 2 | 4 | 133 | 32 | 157 | 2.35e-22 | 87.0 |
| MsG0380014867.01.T01 | MTR_4g028720 | 35.938 | 128 | 80 | 2 | 4 | 131 | 32 | 157 | 2.78e-22 | 87.0 |
| MsG0380014867.01.T01 | MTR_3g466830 | 36.434 | 129 | 81 | 1 | 1 | 129 | 28 | 155 | 6.13e-22 | 86.3 |
| MsG0380014867.01.T01 | MTR_1g077390 | 36.641 | 131 | 81 | 2 | 1 | 131 | 29 | 157 | 1.03e-21 | 85.5 |
| MsG0380014867.01.T01 | MTR_7g011950 | 35.156 | 128 | 81 | 2 | 4 | 131 | 32 | 157 | 1.16e-21 | 85.5 |
| MsG0380014867.01.T01 | MTR_1g084950 | 34.127 | 126 | 81 | 2 | 4 | 129 | 32 | 155 | 1.89e-21 | 84.7 |
| MsG0380014867.01.T01 | MTR_3g466930 | 34.921 | 126 | 81 | 1 | 4 | 129 | 2 | 126 | 4.33e-20 | 80.5 |
| MsG0380014867.01.T01 | MTR_1g090783 | 34.921 | 126 | 80 | 2 | 1 | 126 | 28 | 151 | 1.20e-19 | 80.1 |
| MsG0380014867.01.T01 | MTR_3g466900 | 33.333 | 126 | 83 | 1 | 4 | 129 | 2 | 126 | 3.15e-18 | 75.9 |
| MsG0380014867.01.T01 | MTR_3g466890 | 33.594 | 128 | 84 | 1 | 2 | 129 | 29 | 155 | 2.76e-17 | 73.9 |
| MsG0380014867.01.T01 | MTR_1g090710 | 31.746 | 126 | 85 | 1 | 1 | 126 | 29 | 153 | 4.18e-16 | 70.9 |
| MsG0380014867.01.T01 | MTR_7g055800 | 37.931 | 87 | 39 | 1 | 3 | 89 | 18 | 89 | 1.58e-15 | 67.8 |
| MsG0380014867.01.T01 | MTR_1g090697 | 32.812 | 128 | 80 | 4 | 1 | 126 | 29 | 152 | 7.47e-15 | 67.8 |
| MsG0380014867.01.T01 | MTR_5g047560 | 35.398 | 113 | 71 | 2 | 14 | 126 | 26 | 136 | 2.51e-14 | 65.9 |
| MsG0380014867.01.T01 | MTR_7g055940 | 38.158 | 76 | 32 | 1 | 3 | 78 | 18 | 78 | 9.92e-14 | 62.8 |
| MsG0380014867.01.T01 | MTR_4g019670 | 32.727 | 110 | 64 | 2 | 1 | 107 | 32 | 134 | 2.95e-12 | 63.2 |
| MsG0380014867.01.T01 | MTR_7g106510 | 31.579 | 114 | 63 | 3 | 1 | 111 | 32 | 133 | 4.94e-12 | 62.4 |
| MsG0380014867.01.T01 | MTR_4g028800 | 50.000 | 44 | 22 | 0 | 1 | 44 | 27 | 70 | 1.45e-11 | 57.0 |
| MsG0380014867.01.T01 | MTR_4g084780 | 53.704 | 54 | 25 | 0 | 46 | 99 | 1 | 54 | 7.64e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014867.01.T01 | AT5G48670 | 46.825 | 126 | 62 | 3 | 4 | 127 | 32 | 154 | 4.81e-31 | 113 |
| MsG0380014867.01.T01 | AT5G27810 | 52.809 | 89 | 42 | 0 | 1 | 89 | 1 | 89 | 2.30e-29 | 103 |
| MsG0380014867.01.T01 | AT1G65300 | 39.552 | 134 | 79 | 2 | 2 | 135 | 29 | 160 | 5.19e-23 | 91.7 |
| MsG0380014867.01.T01 | AT1G65330 | 39.683 | 126 | 75 | 1 | 1 | 126 | 28 | 152 | 1.38e-22 | 90.5 |
| MsG0380014867.01.T01 | AT3G05860 | 36.806 | 144 | 86 | 2 | 1 | 142 | 29 | 169 | 4.23e-21 | 85.1 |
| MsG0380014867.01.T01 | AT3G05860 | 36.806 | 144 | 86 | 2 | 1 | 142 | 29 | 169 | 5.18e-21 | 85.9 |
| MsG0380014867.01.T01 | AT3G05860 | 36.806 | 144 | 86 | 2 | 1 | 142 | 29 | 169 | 7.91e-21 | 85.5 |
| MsG0380014867.01.T01 | AT5G26650 | 34.586 | 133 | 78 | 2 | 1 | 129 | 27 | 154 | 6.11e-20 | 84.7 |
| MsG0380014867.01.T01 | AT5G26630 | 35.537 | 121 | 77 | 1 | 6 | 126 | 34 | 153 | 6.55e-20 | 82.4 |
| MsG0380014867.01.T01 | AT1G31640 | 37.037 | 135 | 71 | 4 | 2 | 130 | 29 | 155 | 1.83e-19 | 83.6 |
| MsG0380014867.01.T01 | AT5G27960 | 43.529 | 85 | 48 | 0 | 1 | 85 | 27 | 111 | 3.72e-18 | 79.3 |
| MsG0380014867.01.T01 | AT1G31630 | 33.333 | 129 | 82 | 3 | 3 | 130 | 30 | 155 | 6.69e-17 | 75.9 |
| MsG0380014867.01.T01 | AT1G22590 | 37.647 | 85 | 53 | 0 | 1 | 85 | 29 | 113 | 1.23e-15 | 69.7 |
| MsG0380014867.01.T01 | AT2G28700 | 31.081 | 148 | 91 | 4 | 1 | 143 | 29 | 170 | 7.87e-13 | 64.7 |
| MsG0380014867.01.T01 | AT5G06500 | 27.907 | 129 | 85 | 3 | 1 | 126 | 29 | 152 | 7.44e-12 | 61.2 |
Find 34 sgRNAs with CRISPR-Local
Find 40 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGTCATTTCCATCTTTC+TGG | 0.077675 | 3:+61690095 | None:intergenic |
| ATTCAAACCATAGAATTTAA+TGG | 0.173791 | 3:-61690057 | MsG0380014867.01.T01:CDS |
| CGAATTTCCATTAAATTCTA+TGG | 0.218755 | 3:+61690050 | None:intergenic |
| GAGGTTTGGCCATCAGATTC+AGG | 0.258145 | 3:-61690252 | MsG0380014867.01.T01:CDS |
| CAAGAGGAGGTTGGAAATGA+GGG | 0.355119 | 3:-61689934 | MsG0380014867.01.T01:CDS |
| TCTTCTTGAGGCAAAACATT+AGG | 0.355934 | 3:-61690155 | MsG0380014867.01.T01:CDS |
| AATATAATGATCAATGATAT+TGG | 0.368342 | 3:+61690077 | None:intergenic |
| GAAGTGTGATATCTAGGTTT+AGG | 0.426765 | 3:-61690224 | MsG0380014867.01.T01:CDS |
| TCAAGAGGAGGTTGGAAATG+AGG | 0.431693 | 3:-61689935 | MsG0380014867.01.T01:CDS |
| GGGTCAGAAGTGTGATATCT+AGG | 0.436600 | 3:-61690230 | MsG0380014867.01.T01:CDS |
| TCTAGGTTTAGGAGTTTGCC+TGG | 0.445921 | 3:-61690213 | MsG0380014867.01.T01:CDS |
| AGAATTTGAAGGAGGTTGAT+CGG | 0.478161 | 3:-61689984 | MsG0380014867.01.T01:CDS |
| ACAACCCTCGAGTAGAGGTT+TGG | 0.487846 | 3:-61690266 | MsG0380014867.01.T01:CDS |
| AGGTTTGGCCATCAGATTCA+GGG | 0.511068 | 3:-61690251 | MsG0380014867.01.T01:CDS |
| ACGAGCAGTTGAAGAAGCAA+AGG | 0.512962 | 3:-61690125 | MsG0380014867.01.T01:CDS |
| AAGGGAGGAAACCAGAAAGA+TGG | 0.513695 | 3:-61690106 | MsG0380014867.01.T01:CDS |
| ATCAAAGATCAAGAGGAGGT+TGG | 0.534167 | 3:-61689943 | MsG0380014867.01.T01:CDS |
| AATGACAATCAAAGATCAAG+AGG | 0.572865 | 3:-61689950 | MsG0380014867.01.T01:CDS |
| CGAGCAGTTGAAGAAGCAAA+GGG | 0.580872 | 3:-61690124 | MsG0380014867.01.T01:CDS |
| ACATGCTTCGACTCCACATA+GGG | 0.581479 | 3:+61690308 | None:intergenic |
| AAGAGGAGGTTGGAAATGAG+GGG | 0.584160 | 3:-61689933 | MsG0380014867.01.T01:CDS |
| TATTGATGAGAATTTGAAGG+AGG | 0.592173 | 3:-61689992 | MsG0380014867.01.T01:CDS |
| CACATGCTTCGACTCCACAT+AGG | 0.603214 | 3:+61690307 | None:intergenic |
| AATGAAATTAGCACCCTATG+TGG | 0.604835 | 3:-61690321 | MsG0380014867.01.T01:CDS |
| AGAGGAGGTTGGAAATGAGG+GGG | 0.608627 | 3:-61689932 | MsG0380014867.01.T01:CDS |
| GCAAAACAACCCTCGAGTAG+AGG | 0.609086 | 3:-61690271 | MsG0380014867.01.T01:CDS |
| CTTCTGACCCCTGAATCTGA+TGG | 0.624024 | 3:+61690243 | None:intergenic |
| GATGGCCAAACCTCTACTCG+AGG | 0.634480 | 3:+61690261 | None:intergenic |
| GAGGAGGTTGGAAATGAGGG+GGG | 0.643505 | 3:-61689931 | MsG0380014867.01.T01:CDS |
| GACAATCAAAGATCAAGAGG+AGG | 0.656411 | 3:-61689947 | MsG0380014867.01.T01:CDS |
| GGTTTGGCCATCAGATTCAG+GGG | 0.657992 | 3:-61690250 | MsG0380014867.01.T01:CDS |
| ATGGCCAAACCTCTACTCGA+GGG | 0.659257 | 3:+61690262 | None:intergenic |
| GCAGTTGAAGAAGCAAAGGG+AGG | 0.693727 | 3:-61690121 | MsG0380014867.01.T01:CDS |
| TGGATCAGGAGGTCTTCTTG+AGG | 0.700337 | 3:-61690167 | MsG0380014867.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAATGATCAATGATAT+TGG | + | Chr3:61690183-61690202 | None:intergenic | 15.0% |
| !! | ATTCAAACCATAGAATTTAA+TGG | - | Chr3:61690200-61690219 | MsG0380014867.01.T01:CDS | 20.0% |
| !!! | TTTTATTGATGAGAATTTGA+AGG | - | Chr3:61690262-61690281 | MsG0380014867.01.T01:CDS | 20.0% |
| ! | ACATGAACAAAGTAAAAAGA+TGG | - | Chr3:61690067-61690086 | MsG0380014867.01.T01:CDS | 25.0% |
| ! | CGAATTTCCATTAAATTCTA+TGG | + | Chr3:61690210-61690229 | None:intergenic | 25.0% |
| AATGACAATCAAAGATCAAG+AGG | - | Chr3:61690307-61690326 | MsG0380014867.01.T01:CDS | 30.0% | |
| TATTGATGAGAATTTGAAGG+AGG | - | Chr3:61690265-61690284 | MsG0380014867.01.T01:CDS | 30.0% | |
| TGAACAAAGTAAAAAGATGG+TGG | - | Chr3:61690070-61690089 | MsG0380014867.01.T01:CDS | 30.0% | |
| ! | TTTTTACTTTGTTCATGTCC+AGG | + | Chr3:61690065-61690084 | None:intergenic | 30.0% |
| AATGAAATTAGCACCCTATG+TGG | - | Chr3:61689936-61689955 | MsG0380014867.01.T01:CDS | 35.0% | |
| ATTGGTCATTTCCATCTTTC+TGG | + | Chr3:61690165-61690184 | None:intergenic | 35.0% | |
| GAAGTGTGATATCTAGGTTT+AGG | - | Chr3:61690033-61690052 | MsG0380014867.01.T01:CDS | 35.0% | |
| TCTTCTTGAGGCAAAACATT+AGG | - | Chr3:61690102-61690121 | MsG0380014867.01.T01:CDS | 35.0% | |
| ! | AGAATTTGAAGGAGGTTGAT+CGG | - | Chr3:61690273-61690292 | MsG0380014867.01.T01:CDS | 35.0% |
| !! | AAGTAAAAAGATGGTGGATC+AGG | - | Chr3:61690076-61690095 | MsG0380014867.01.T01:CDS | 35.0% |
| ATCAAAGATCAAGAGGAGGT+TGG | - | Chr3:61690314-61690333 | MsG0380014867.01.T01:CDS | 40.0% | |
| GACAATCAAAGATCAAGAGG+AGG | - | Chr3:61690310-61690329 | MsG0380014867.01.T01:CDS | 40.0% | |
| !! | TAAAAAGATGGTGGATCAGG+AGG | - | Chr3:61690079-61690098 | MsG0380014867.01.T01:CDS | 40.0% |
| AAGAGGAGGTTGGAAATGAG+GGG | - | Chr3:61690324-61690343 | MsG0380014867.01.T01:CDS | 45.0% | |
| AAGGGAGGAAACCAGAAAGA+TGG | - | Chr3:61690151-61690170 | MsG0380014867.01.T01:CDS | 45.0% | |
| ACATGCTTCGACTCCACATA+GGG | + | Chr3:61689952-61689971 | None:intergenic | 45.0% | |
| ACGAGCAGTTGAAGAAGCAA+AGG | - | Chr3:61690132-61690151 | MsG0380014867.01.T01:CDS | 45.0% | |
| AGGTTTGGCCATCAGATTCA+GGG | - | Chr3:61690006-61690025 | MsG0380014867.01.T01:CDS | 45.0% | |
| CAAGAGGAGGTTGGAAATGA+GGG | - | Chr3:61690323-61690342 | MsG0380014867.01.T01:CDS | 45.0% | |
| CGAGCAGTTGAAGAAGCAAA+GGG | - | Chr3:61690133-61690152 | MsG0380014867.01.T01:CDS | 45.0% | |
| TCAAGAGGAGGTTGGAAATG+AGG | - | Chr3:61690322-61690341 | MsG0380014867.01.T01:CDS | 45.0% | |
| TCTAGGTTTAGGAGTTTGCC+TGG | - | Chr3:61690044-61690063 | MsG0380014867.01.T01:CDS | 45.0% | |
| ! | GGGTCAGAAGTGTGATATCT+AGG | - | Chr3:61690027-61690046 | MsG0380014867.01.T01:CDS | 45.0% |
| ACAACCCTCGAGTAGAGGTT+TGG | - | Chr3:61689991-61690010 | MsG0380014867.01.T01:CDS | 50.0% | |
| AGAGGAGGTTGGAAATGAGG+GGG | - | Chr3:61690325-61690344 | MsG0380014867.01.T01:CDS | 50.0% | |
| ATGGCCAAACCTCTACTCGA+GGG | + | Chr3:61689998-61690017 | None:intergenic | 50.0% | |
| CACATGCTTCGACTCCACAT+AGG | + | Chr3:61689953-61689972 | None:intergenic | 50.0% | |
| CTTCTGACCCCTGAATCTGA+TGG | + | Chr3:61690017-61690036 | None:intergenic | 50.0% | |
| GAGGTTTGGCCATCAGATTC+AGG | - | Chr3:61690005-61690024 | MsG0380014867.01.T01:CDS | 50.0% | |
| GCAAAACAACCCTCGAGTAG+AGG | - | Chr3:61689986-61690005 | MsG0380014867.01.T01:CDS | 50.0% | |
| GCAGTTGAAGAAGCAAAGGG+AGG | - | Chr3:61690136-61690155 | MsG0380014867.01.T01:CDS | 50.0% | |
| GGTTTGGCCATCAGATTCAG+GGG | - | Chr3:61690007-61690026 | MsG0380014867.01.T01:CDS | 50.0% | |
| TGGATCAGGAGGTCTTCTTG+AGG | - | Chr3:61690090-61690109 | MsG0380014867.01.T01:CDS | 50.0% | |
| GAGGAGGTTGGAAATGAGGG+GGG | - | Chr3:61690326-61690345 | MsG0380014867.01.T01:CDS | 55.0% | |
| GATGGCCAAACCTCTACTCG+AGG | + | Chr3:61689999-61690018 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 61689924 | 61690355 | 61689924 | ID=MsG0380014867.01;Name=MsG0380014867.01 |
| Chr3 | mRNA | 61689924 | 61690355 | 61689924 | ID=MsG0380014867.01.T01;Parent=MsG0380014867.01;Name=MsG0380014867.01.T01;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|143 |
| Chr3 | exon | 61689924 | 61690355 | 61689924 | ID=MsG0380014867.01.T01:exon:29326;Parent=MsG0380014867.01.T01 |
| Chr3 | CDS | 61689924 | 61690355 | 61689924 | ID=MsG0380014867.01.T01:cds;Parent=MsG0380014867.01.T01 |
| Gene Sequence |
| Protein sequence |
