AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026564.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026564.01.T01 MTR_5g046870 100.000 61 0 0 1 61 1 61 5.06e-39 124
MsG0580026564.01.T01 MTR_7g016600 90.164 61 6 0 1 61 1 61 3.51e-35 119
MsG0580026564.01.T01 MTR_6g015975 90.164 61 6 0 1 61 1 61 8.15e-35 118
MsG0580026564.01.T01 MTR_8g097090 90.164 61 6 0 1 61 1 61 8.47e-35 117
MsG0580026564.01.T01 MTR_3g084980 88.525 61 7 0 1 61 1 61 2.37e-34 116
MsG0580026564.01.T01 MTR_8g033270 91.525 59 5 0 1 59 1 59 8.69e-33 112
MsG0580026564.01.T01 MTR_7g075850 86.885 61 8 0 1 61 1 61 1.05e-32 112
MsG0580026564.01.T01 MTR_4g109810 89.831 59 6 0 1 59 1 59 9.11e-32 110
MsG0580026564.01.T01 MTR_2g461710 76.271 59 14 0 1 59 1 59 4.42e-30 100
MsG0580026564.01.T01 MTR_3g005530 77.049 61 14 0 1 61 1 61 7.98e-30 104
MsG0580026564.01.T01 MTR_3g452380 73.770 61 16 0 1 61 16 76 1.56e-29 104
MsG0580026564.01.T01 MTR_2g017865 75.410 61 15 0 1 61 16 76 1.86e-29 104
MsG0580026564.01.T01 MTR_8g087860 73.770 61 16 0 1 61 17 77 4.57e-29 103
MsG0580026564.01.T01 MTR_4g109830 75.410 61 15 0 1 61 1 61 1.08e-28 102
MsG0580026564.01.T01 MTR_7g075870 76.667 60 14 0 1 60 1 60 2.09e-28 100
MsG0580026564.01.T01 MTR_7g075870 76.667 60 14 0 1 60 1 60 2.12e-28 100
MsG0580026564.01.T01 MTR_8g033220 72.131 61 17 0 1 61 1 61 5.41e-28 99.8
MsG0580026564.01.T01 MTR_8g066260 72.131 61 17 0 1 61 1 61 5.96e-28 100
MsG0580026564.01.T01 MTR_8g033220 72.131 61 17 0 1 61 1 61 7.32e-28 99.8
MsG0580026564.01.T01 MTR_4g102530 73.770 61 16 0 1 61 1 61 1.18e-27 98.6
MsG0580026564.01.T01 MTR_1g101970 74.576 59 15 0 1 59 1 59 1.67e-26 95.1
MsG0580026564.01.T01 MTR_1g053070 73.770 61 16 0 1 61 1 61 1.70e-26 96.7
MsG0580026564.01.T01 MTR_5g046790 70.492 61 18 0 1 61 1 61 4.08e-26 94.7
MsG0580026564.01.T01 MTR_6g464720 77.049 61 14 0 1 61 1 61 6.53e-26 95.1
MsG0580026564.01.T01 MTR_5g066960 66.102 59 20 0 1 59 1 59 7.65e-26 89.7
MsG0580026564.01.T01 MTR_0003s0590 71.667 60 17 0 1 60 1 60 1.45e-25 94.4
MsG0580026564.01.T01 MTR_2g009890 67.213 61 20 0 1 61 1 61 4.92e-25 93.6
MsG0580026564.01.T01 MTR_4g036050 67.797 59 19 0 1 59 1 59 1.20e-24 90.1
MsG0580026564.01.T01 MTR_4g036050 67.797 59 19 0 1 59 1 59 1.53e-24 90.1
MsG0580026564.01.T01 MTR_4g036050 67.797 59 19 0 1 59 1 59 1.58e-24 90.1
MsG0580026564.01.T01 MTR_4g036050 67.797 59 19 0 1 59 1 59 2.12e-24 90.1
MsG0580026564.01.T01 MTR_3g088615 62.295 61 23 0 1 61 1 61 2.39e-24 89.4
MsG0580026564.01.T01 MTR_3g113030 62.295 61 23 0 1 61 1 61 9.93e-24 89.0
MsG0580026564.01.T01 MTR_1g038300 63.934 61 22 0 1 61 1 61 3.52e-23 87.8
MsG0580026564.01.T01 MTR_7g016630 68.333 60 19 0 1 60 1 60 4.51e-23 87.8
MsG0580026564.01.T01 MTR_4g084740 64.516 62 21 1 1 62 1 61 9.78e-23 88.2
MsG0580026564.01.T01 MTR_5g021270 62.712 59 22 0 1 59 1 59 1.01e-22 86.3
MsG0580026564.01.T01 MTR_5g021270 62.712 59 22 0 1 59 1 59 1.08e-22 86.3
MsG0580026564.01.T01 MTR_4g093030 64.407 59 21 0 1 59 1 59 1.69e-22 84.3
MsG0580026564.01.T01 MTR_1g029670 57.377 61 26 0 1 61 1 61 7.65e-22 83.2
MsG0580026564.01.T01 MTR_5g032520 64.407 59 21 0 1 59 1 59 7.79e-22 84.0
MsG0580026564.01.T01 MTR_5g031000 60.656 61 24 0 1 61 1 61 8.09e-22 84.0
MsG0580026564.01.T01 MTR_5g032150 64.407 59 21 0 1 59 1 59 8.55e-22 84.0
MsG0580026564.01.T01 MTR_5g031000 60.656 61 24 0 1 61 1 61 9.25e-22 84.0
MsG0580026564.01.T01 MTR_5g066180 60.656 61 24 0 1 61 1 61 2.02e-21 82.8
MsG0580026564.01.T01 MTR_3g102570 62.903 62 22 1 1 62 1 61 1.88e-20 82.0
MsG0580026564.01.T01 MTR_4g093970 54.098 61 28 0 1 61 27 87 2.57e-19 77.8
MsG0580026564.01.T01 MTR_1g041615 75.000 44 11 0 16 59 20 63 6.26e-19 74.3
MsG0580026564.01.T01 MTR_2g030740 57.143 56 24 0 2 57 9 64 1.37e-17 73.2
MsG0580026564.01.T01 MTR_1g108580 55.357 56 25 0 2 57 9 64 5.78e-17 71.2
MsG0580026564.01.T01 MTR_1g108510 53.571 56 26 0 2 57 9 64 6.85e-17 71.2
MsG0580026564.01.T01 MTR_3g030770 53.571 56 26 0 2 57 9 64 7.22e-17 71.2
MsG0580026564.01.T01 MTR_5g041650 53.226 62 28 1 1 62 38 98 8.18e-17 72.4
MsG0580026564.01.T01 MTR_3g052920 57.143 56 24 0 2 57 9 64 1.22e-16 70.5
MsG0580026564.01.T01 MTR_2g093190 51.786 56 27 0 2 57 9 64 1.98e-16 70.1
MsG0580026564.01.T01 MTR_8g079502 52.632 57 27 0 1 57 1 57 2.95e-16 68.6
MsG0580026564.01.T01 MTR_8g086290 53.571 56 26 0 2 57 12 67 4.43e-16 68.2
MsG0580026564.01.T01 MTR_1g105920 53.571 56 26 0 2 57 9 64 5.57e-16 68.9
MsG0580026564.01.T01 MTR_3g052870 53.571 56 26 0 2 57 9 64 5.83e-16 68.6
MsG0580026564.01.T01 MTR_5g045560 56.140 57 25 0 1 57 8 64 5.99e-16 68.9
MsG0580026564.01.T01 MTR_8g051580 50.877 57 28 0 1 57 1 57 6.65e-16 67.8
MsG0580026564.01.T01 MTR_1g047550 52.632 57 27 0 1 57 1 57 7.85e-16 67.4
MsG0580026564.01.T01 MTR_1g012570 57.143 56 24 0 2 57 9 64 7.86e-16 68.6
MsG0580026564.01.T01 MTR_2g105290 52.632 57 27 0 1 57 11 67 1.23e-15 67.0
MsG0580026564.01.T01 MTR_1g077360 53.571 56 26 0 2 57 9 64 1.25e-15 67.8
MsG0580026564.01.T01 MTR_4g094632 49.180 61 31 0 1 61 1 61 1.27e-15 66.6
MsG0580026564.01.T01 MTR_8g043650 53.571 56 26 0 2 57 9 64 1.31e-15 67.8
MsG0580026564.01.T01 MTR_2g085280 55.357 56 25 0 2 57 9 64 1.78e-15 67.4
MsG0580026564.01.T01 MTR_2g085250 55.357 56 25 0 2 57 9 64 1.80e-15 67.4
MsG0580026564.01.T01 MTR_1g075600 53.571 56 26 0 2 57 9 64 1.85e-15 67.4
MsG0580026564.01.T01 MTR_1g105910 53.571 56 26 0 2 57 9 64 1.85e-15 67.4
MsG0580026564.01.T01 MTR_1g054265 50.877 57 28 0 1 57 1 57 2.14e-15 66.2
MsG0580026564.01.T01 MTR_1g063160 49.123 57 29 0 1 57 1 57 2.89e-15 65.9
MsG0580026564.01.T01 MTR_5g053390 55.357 56 25 0 2 57 9 64 4.40e-15 66.6
MsG0580026564.01.T01 MTR_5g055100 55.357 56 25 0 2 57 9 64 7.50e-15 65.9
MsG0580026564.01.T01 MTR_0121s0100 50.000 56 28 0 2 57 9 64 7.98e-15 63.9
MsG0580026564.01.T01 MTR_4g108720 52.830 53 25 0 1 53 1 53 1.99e-14 65.5
MsG0580026564.01.T01 MTR_1g106070 50.000 56 28 0 2 57 9 64 2.55e-14 63.5
MsG0580026564.01.T01 MTR_4g131030 49.123 57 29 0 1 57 1 57 4.08e-14 63.5
MsG0580026564.01.T01 MTR_4g094638 47.458 59 31 0 1 59 1 59 5.27e-14 62.8
MsG0580026564.01.T01 MTR_0121s0080 50.000 58 27 1 2 57 7 64 1.98e-13 62.0
MsG0580026564.01.T01 MTR_7g028448 62.222 45 15 1 16 60 26 68 3.08e-13 60.5
MsG0580026564.01.T01 MTR_4g036915 62.222 45 15 1 16 60 26 68 3.08e-13 60.5
MsG0580026564.01.T01 MTR_3g030780 46.429 56 30 0 2 57 9 64 6.08e-13 58.9
MsG0580026564.01.T01 MTR_8g046350 45.614 57 31 0 1 57 1 57 1.38e-12 58.9
MsG0580026564.01.T01 MTR_3g080940 45.614 57 31 0 1 57 8 64 2.15e-12 58.9
MsG0580026564.01.T01 MTR_3g067875 53.191 47 22 0 11 57 1 47 1.84e-11 53.5
MsG0580026564.01.T01 MTR_6g018920 42.857 49 28 0 1 49 1 49 3.24e-11 56.6
MsG0580026564.01.T01 MTR_1g105905 51.064 47 23 0 11 57 1 47 5.06e-11 55.5
MsG0580026564.01.T01 MTR_6g005440 42.857 49 28 0 1 49 1 49 9.21e-11 55.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026564.01.T01 AT2G03710 88.525 61 7 0 1 61 1 61 2.34e-35 117
MsG0580026564.01.T01 AT1G24260 90.164 61 6 0 1 61 1 61 7.45e-35 117
MsG0580026564.01.T01 AT1G24260 90.164 61 6 0 1 61 1 61 9.31e-35 117
MsG0580026564.01.T01 AT1G24260 90.164 61 6 0 1 61 1 61 9.95e-35 117
MsG0580026564.01.T01 AT5G15800 90.164 61 6 0 1 61 1 61 1.47e-34 117
MsG0580026564.01.T01 AT5G15800 90.164 61 6 0 1 61 1 61 3.34e-34 116
MsG0580026564.01.T01 AT3G02310 86.885 61 8 0 1 61 1 61 8.61e-34 114
MsG0580026564.01.T01 AT2G03710 91.525 59 5 0 1 59 1 59 9.04e-33 113
MsG0580026564.01.T01 AT2G03710 91.525 59 5 0 1 59 1 59 9.25e-33 113
MsG0580026564.01.T01 AT2G45650 89.831 59 6 0 1 59 1 59 2.15e-32 112
MsG0580026564.01.T01 AT3G02310 89.831 59 6 0 1 59 1 59 4.88e-32 110
MsG0580026564.01.T01 AT4G09960 76.667 60 14 0 1 60 1 60 3.97e-30 105
MsG0580026564.01.T01 AT4G09960 75.410 61 15 0 1 61 1 61 5.30e-30 105
MsG0580026564.01.T01 AT4G09960 75.410 61 15 0 1 61 2 62 5.37e-30 105
MsG0580026564.01.T01 AT4G09960 76.667 60 14 0 1 60 11 70 6.55e-30 105
MsG0580026564.01.T01 AT4G09960 75.410 61 15 0 1 61 27 87 1.29e-29 104
MsG0580026564.01.T01 AT4G18960 76.667 60 14 0 2 61 18 77 2.07e-29 104
MsG0580026564.01.T01 AT3G58780 73.770 61 16 0 1 61 16 76 3.50e-29 103
MsG0580026564.01.T01 AT2G42830 73.770 61 16 0 1 61 16 76 4.16e-29 103
MsG0580026564.01.T01 AT2G42830 73.770 61 16 0 1 61 16 76 4.25e-29 103
MsG0580026564.01.T01 AT4G09960 75.410 61 15 0 1 61 96 156 4.29e-29 105
MsG0580026564.01.T01 AT3G58780 73.770 61 16 0 1 61 22 82 4.32e-29 103
MsG0580026564.01.T01 AT5G60910 73.770 61 16 0 1 61 1 61 4.84e-29 103
MsG0580026564.01.T01 AT3G58780 75.000 60 15 0 1 60 16 75 5.28e-29 102
MsG0580026564.01.T01 AT3G58780 73.770 61 16 0 1 61 16 76 5.98e-29 103
MsG0580026564.01.T01 AT4G11880 77.049 61 14 0 1 61 1 61 6.32e-29 101
MsG0580026564.01.T01 AT4G11880 77.049 61 14 0 1 61 1 61 6.32e-29 101
MsG0580026564.01.T01 AT3G58780 73.770 61 16 0 1 61 16 76 6.39e-29 103
MsG0580026564.01.T01 AT4G11880 77.049 61 14 0 1 61 1 61 1.02e-28 101
MsG0580026564.01.T01 AT4G11880 77.049 61 14 0 1 61 1 61 1.02e-28 101
MsG0580026564.01.T01 AT1G69120 70.492 61 18 0 1 61 1 61 3.46e-28 100
MsG0580026564.01.T01 AT3G61120 79.661 59 12 0 1 59 1 59 3.56e-28 100
MsG0580026564.01.T01 AT4G22950 73.770 61 16 0 1 61 1 61 5.84e-28 98.6
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 6.33e-28 96.3
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 8.49e-28 97.8
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 8.49e-28 97.8
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 8.49e-28 97.8
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 8.81e-28 97.4
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 8.81e-28 97.4
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 8.81e-28 97.4
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 8.81e-28 97.4
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 8.81e-28 97.4
MsG0580026564.01.T01 AT2G45660 73.333 60 16 0 1 60 1 60 1.18e-27 97.4
MsG0580026564.01.T01 AT1G69120 70.492 61 18 0 1 61 1 61 1.31e-27 99.8
MsG0580026564.01.T01 AT4G22950 73.770 61 16 0 1 61 1 61 1.93e-27 98.6
MsG0580026564.01.T01 AT4G22950 73.770 61 16 0 1 61 1 61 1.93e-27 98.6
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 4.08e-27 97.1
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 4.08e-27 97.1
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 4.68e-27 97.1
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 4.68e-27 97.1
MsG0580026564.01.T01 AT5G62165 71.667 60 17 0 1 60 1 60 4.68e-27 97.1
MsG0580026564.01.T01 AT2G45660 73.333 60 16 0 1 60 1 60 5.41e-27 97.1
MsG0580026564.01.T01 AT3G57390 72.881 59 16 0 1 59 1 59 5.24e-26 94.7
MsG0580026564.01.T01 AT3G57390 72.881 59 16 0 1 59 1 59 1.02e-25 94.7
MsG0580026564.01.T01 AT3G57230 67.213 61 20 0 1 61 1 61 1.13e-25 92.0
MsG0580026564.01.T01 AT1G26310 76.271 59 14 0 1 59 1 59 3.31e-25 93.6
MsG0580026564.01.T01 AT5G13790 71.186 59 17 0 1 59 1 59 5.50e-25 93.2
MsG0580026564.01.T01 AT5G13790 71.186 59 17 0 1 59 1 59 5.98e-25 93.2
MsG0580026564.01.T01 AT3G30260 68.852 61 19 0 1 61 1 61 2.04e-24 91.3
MsG0580026564.01.T01 AT2G14210 65.574 61 21 0 1 61 1 61 2.89e-24 90.5
MsG0580026564.01.T01 AT5G10140 66.667 60 20 0 1 60 1 60 3.05e-24 89.4
MsG0580026564.01.T01 AT5G20240 67.241 58 19 0 1 58 1 58 3.06e-24 88.6
MsG0580026564.01.T01 AT5G10140 66.667 60 20 0 1 60 1 60 3.15e-24 89.0
MsG0580026564.01.T01 AT2G14210 65.574 61 21 0 1 61 1 61 3.76e-24 90.1
MsG0580026564.01.T01 AT5G10140 66.667 60 20 0 1 60 1 60 4.72e-24 89.0
MsG0580026564.01.T01 AT5G23260 66.102 59 20 0 1 59 1 59 6.10e-24 89.7
MsG0580026564.01.T01 AT4G37940 63.934 61 22 0 1 61 1 61 7.08e-24 88.2
MsG0580026564.01.T01 AT5G20240 67.241 58 19 0 1 58 1 58 7.25e-24 89.0
MsG0580026564.01.T01 AT5G51860 65.000 60 21 0 1 60 1 60 8.35e-24 88.6
MsG0580026564.01.T01 AT5G51860 65.000 60 21 0 1 60 1 60 1.07e-23 88.6
MsG0580026564.01.T01 AT5G23260 66.102 59 20 0 1 59 1 59 1.69e-23 89.0
MsG0580026564.01.T01 AT1G71692 64.407 59 21 0 1 59 1 59 1.75e-23 88.2
MsG0580026564.01.T01 AT5G65070 66.667 60 20 0 1 60 1 60 2.90e-23 85.9
MsG0580026564.01.T01 AT2G22540 63.934 61 22 0 1 61 1 61 3.01e-23 88.2
MsG0580026564.01.T01 AT2G22540 63.934 61 22 0 1 61 1 61 3.01e-23 88.2
MsG0580026564.01.T01 AT5G65070 66.129 62 21 0 1 62 1 62 3.38e-23 87.8
MsG0580026564.01.T01 AT5G65070 66.667 60 20 0 1 60 1 60 4.62e-23 86.7
MsG0580026564.01.T01 AT5G23260 66.102 59 20 0 1 59 17 75 6.21e-23 87.8
MsG0580026564.01.T01 AT3G57230 67.213 61 20 0 1 61 1 61 7.12e-23 87.0
MsG0580026564.01.T01 AT3G57230 67.213 61 20 0 1 61 1 61 7.12e-23 87.0
MsG0580026564.01.T01 AT5G23260 66.102 59 20 0 1 59 17 75 7.25e-23 87.4
MsG0580026564.01.T01 AT1G22130 64.516 62 22 0 1 62 1 62 8.08e-23 88.6
MsG0580026564.01.T01 AT5G65070 66.667 60 20 0 1 60 1 60 8.38e-23 86.3
MsG0580026564.01.T01 AT5G51870 61.667 60 23 0 1 60 1 60 8.67e-23 85.1
MsG0580026564.01.T01 AT5G65070 66.667 60 20 0 1 60 1 60 1.22e-22 86.3
MsG0580026564.01.T01 AT5G51870 61.667 60 23 0 1 60 1 60 1.80e-22 85.5
MsG0580026564.01.T01 AT5G10140 66.667 60 20 0 1 60 1 60 1.90e-22 85.1
MsG0580026564.01.T01 AT1G77980 62.903 62 23 0 1 62 1 62 2.13e-22 87.4
MsG0580026564.01.T01 AT5G51870 61.667 60 23 0 1 60 24 83 2.18e-22 84.7
MsG0580026564.01.T01 AT5G51870 61.667 60 23 0 1 60 1 60 3.12e-22 85.1
MsG0580026564.01.T01 AT5G51870 61.667 60 23 0 1 60 11 70 4.42e-22 84.7
MsG0580026564.01.T01 AT3G54340 62.712 59 22 0 1 59 1 59 7.86e-22 84.3
MsG0580026564.01.T01 AT5G65050 60.000 60 24 0 1 60 1 60 1.13e-21 82.4
MsG0580026564.01.T01 AT2G22630 59.016 61 25 0 1 61 1 61 2.18e-21 82.8
MsG0580026564.01.T01 AT2G22630 59.016 61 25 0 1 61 1 61 2.18e-21 82.8
MsG0580026564.01.T01 AT4G37940 63.934 61 22 0 1 61 1 61 2.38e-21 82.4
MsG0580026564.01.T01 AT5G65050 60.000 60 24 0 1 60 1 60 3.19e-21 81.6
MsG0580026564.01.T01 AT5G65050 60.000 60 24 0 1 60 1 60 3.44e-21 81.6
MsG0580026564.01.T01 AT5G65050 60.000 60 24 0 1 60 1 60 3.80e-21 81.6
MsG0580026564.01.T01 AT4G37940 63.934 61 22 0 1 61 1 61 3.90e-21 82.4
MsG0580026564.01.T01 AT5G65080 64.516 62 22 0 1 62 8 69 3.93e-21 81.6
MsG0580026564.01.T01 AT4G24540 63.333 60 22 0 1 60 1 60 9.48e-21 81.3
MsG0580026564.01.T01 AT5G65080 65.000 60 21 0 1 60 8 67 1.05e-20 80.5
MsG0580026564.01.T01 AT1G31140 59.016 61 25 0 1 61 1 61 2.94e-20 79.7
MsG0580026564.01.T01 AT5G65060 58.333 60 25 0 1 60 1 60 7.26e-20 78.2
MsG0580026564.01.T01 AT5G65060 58.333 60 25 0 1 60 1 60 8.59e-20 77.8
MsG0580026564.01.T01 AT5G65060 58.333 60 25 0 1 60 1 60 1.00e-19 77.8
MsG0580026564.01.T01 AT2G22540 61.404 57 22 0 1 57 1 57 1.14e-19 78.6
MsG0580026564.01.T01 AT1G31140 59.016 61 25 0 1 61 1 61 1.01e-18 75.9
MsG0580026564.01.T01 AT4G37435 54.839 62 28 0 1 62 1 62 1.57e-18 74.7
MsG0580026564.01.T01 AT1G77950 58.065 62 26 0 1 62 1 62 5.44e-18 74.3
MsG0580026564.01.T01 AT1G77950 58.065 62 26 0 1 62 1 62 5.44e-18 74.3
MsG0580026564.01.T01 AT1G77950 58.065 62 26 0 1 62 1 62 5.44e-18 74.3
MsG0580026564.01.T01 AT1G77950 58.065 62 26 0 1 62 1 62 5.44e-18 74.3
MsG0580026564.01.T01 AT2G03060 56.452 62 26 1 1 62 1 61 1.38e-17 74.7
MsG0580026564.01.T01 AT2G03060 56.452 62 26 1 1 62 1 61 1.38e-17 74.7
MsG0580026564.01.T01 AT2G03060 56.452 62 26 1 1 62 1 61 1.38e-17 74.7
MsG0580026564.01.T01 AT2G03060 56.452 62 26 1 1 62 1 61 2.34e-17 73.9
MsG0580026564.01.T01 AT1G77080 60.000 60 24 0 1 60 1 60 3.96e-17 70.9
MsG0580026564.01.T01 AT1G77080 60.000 60 24 0 1 60 1 60 4.78e-17 70.5
MsG0580026564.01.T01 AT1G77080 60.000 60 24 0 1 60 1 60 5.20e-17 69.7
MsG0580026564.01.T01 AT1G77080 60.000 60 24 0 1 60 1 60 7.81e-17 70.5
MsG0580026564.01.T01 AT1G18750 54.386 57 26 0 1 57 1 57 1.07e-16 72.0
MsG0580026564.01.T01 AT1G18750 54.386 57 26 0 1 57 1 57 1.10e-16 72.0
MsG0580026564.01.T01 AT1G18750 54.386 57 26 0 1 57 1 57 1.11e-16 72.0
MsG0580026564.01.T01 AT1G77080 60.000 60 24 0 1 60 1 60 1.11e-16 70.1
MsG0580026564.01.T01 AT1G01530 56.140 57 25 0 1 57 6 62 1.86e-16 70.5
MsG0580026564.01.T01 AT1G77080 60.000 60 24 0 1 60 1 60 1.89e-16 70.1
MsG0580026564.01.T01 AT5G60440 51.786 56 27 0 2 57 7 62 8.59e-15 66.2
MsG0580026564.01.T01 AT4G36590 55.357 56 25 0 2 57 7 62 8.77e-15 65.9
MsG0580026564.01.T01 AT3G66656 47.368 57 30 0 1 57 1 57 2.03e-14 63.9
MsG0580026564.01.T01 AT1G65360 49.123 57 29 0 1 57 6 62 2.44e-14 64.3
MsG0580026564.01.T01 AT1G69540 52.830 53 25 0 1 53 1 53 3.87e-14 65.1
MsG0580026564.01.T01 AT1G69540 52.830 53 25 0 1 53 1 53 3.90e-14 64.7
MsG0580026564.01.T01 AT2G34440 45.614 57 31 0 1 57 1 57 6.65e-14 62.4
MsG0580026564.01.T01 AT1G72350 51.786 56 27 0 2 57 43 98 7.35e-14 63.2
MsG0580026564.01.T01 AT3G04100 45.000 60 33 0 2 61 14 73 1.56e-13 62.0
MsG0580026564.01.T01 AT1G47760 47.368 57 30 0 1 57 1 57 3.62e-13 60.8
MsG0580026564.01.T01 AT2G24840 47.368 57 30 0 1 57 62 118 3.42e-12 58.9
MsG0580026564.01.T01 AT2G26320 45.161 62 34 0 1 62 17 78 6.17e-12 55.8
MsG0580026564.01.T01 AT1G29962 46.667 60 32 0 2 61 8 67 1.00e-11 57.0
MsG0580026564.01.T01 AT1G28460 48.333 60 31 0 2 61 8 67 1.01e-11 57.0
MsG0580026564.01.T01 AT5G26580 45.614 57 31 0 1 57 1 57 5.45e-11 55.8

Find 12 sgRNAs with CRISPR-Local

Find 9 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTTGCAAAGAGAAGAAA+TGG 0.365480 5:+39651481 MsG0580026564.01.T01:CDS
AAGCAATAAAATAATGGGTA+GGG 0.438614 5:+39651411 None:intergenic
CTCTCTCCTTTGTGATGCTG+AGG 0.508762 5:+39651528 MsG0580026564.01.T01:CDS
ATGAGTTCTGCAGTGGCACT+AGG 0.518046 5:+39651587 MsG0580026564.01.T01:CDS
AAAGCAATAAAATAATGGGT+AGG 0.518687 5:+39651410 None:intergenic
TAAAATAATGGGTAGGGGAA+AGG 0.519037 5:+39651417 None:intergenic
AGCAATAAAATAATGGGTAG+GGG 0.548277 5:+39651412 None:intergenic
AAGAAATGGGATGCTCAAGA+AGG 0.586753 5:+39651495 MsG0580026564.01.T01:CDS
CATTTGCAAAGAGAAGAAAT+GGG 0.608010 5:+39651482 MsG0580026564.01.T01:CDS
AAGCTCTATGAGTTCTGCAG+TGG 0.649168 5:+39651580 MsG0580026564.01.T01:CDS
GAGCAACCTCAGCATCACAA+AGG 0.683343 5:-39651534 None:intergenic
AGAACTCATAGAGCTTTCCA+CGG 0.694795 5:-39651573 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
ACATTTGCAAAGAGAAGAAA+TGG + Chr5:39651481-39651500 MsG0580026564.01.T01:CDS 30.0%
CATTTGCAAAGAGAAGAAAT+GGG + Chr5:39651482-39651501 MsG0580026564.01.T01:CDS 30.0%
AAGAAATGGGATGCTCAAGA+AGG + Chr5:39651495-39651514 MsG0580026564.01.T01:CDS 40.0%
AGAACTCATAGAGCTTTCCA+CGG - Chr5:39651576-39651595 None:intergenic 40.0%
! CTCATTATTTTCTCTAGCCG+TGG + Chr5:39651556-39651575 MsG0580026564.01.T01:CDS 40.0%
AAGCTCTATGAGTTCTGCAG+TGG + Chr5:39651580-39651599 MsG0580026564.01.T01:CDS 45.0%
ATGAGTTCTGCAGTGGCACT+AGG + Chr5:39651587-39651606 MsG0580026564.01.T01:CDS 50.0%
CTCTCTCCTTTGTGATGCTG+AGG + Chr5:39651528-39651547 MsG0580026564.01.T01:CDS 50.0%
GAGCAACCTCAGCATCACAA+AGG - Chr5:39651537-39651556 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
Chr5 gene 39651424 39651612 39651424 ID=MsG0580026564.01;Name=MsG0580026564.01
Chr5 mRNA 39651424 39651612 39651424 ID=MsG0580026564.01.T01;Parent=MsG0580026564.01;Name=MsG0580026564.01.T01;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|0|1|0|62
Chr5 exon 39651424 39651612 39651424 ID=MsG0580026564.01.T01:exon:9481;Parent=MsG0580026564.01.T01
Chr5 CDS 39651424 39651612 39651424 ID=MsG0580026564.01.T01:cds;Parent=MsG0580026564.01.T01
Gene Sequence

>MsG0580026564.01.T01

ATGGGTAGGGGAAAGGTAGAGCTAAAGAGAATTGAGAACAAAATAAATCGTCAAGTTACATTTGCAAAGAGAAGAAATGGGATGCTCAAGAAGGCTTATGAACTCTCTCTCCTTTGTGATGCTGAGGTTGCTCTCATTATTTTCTCTAGCCGTGGAAAGCTCTATGAGTTCTGCAGTGGCACTAGGTAA
Protein sequence

>MsG0580026564.01.T01

MGRGKVELKRIENKINRQVTFAKRRNGMLKKAYELSLLCDAEVALIIFSSRGKLYEFCSGTR*