AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027093.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027093.01.T01 MTR_5g053260 90.991 444 18 3 16 438 103 545 0.0 797
MsG0580027093.01.T01 MTR_6g053740 31.633 392 239 5 68 433 427 815 1.35e-53 192
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027093.01.T01 AT3G25680 46.882 465 219 5 1 438 95 558 3.70e-138 407
MsG0580027093.01.T01 AT5G23890 31.347 386 245 3 68 433 300 685 1.60e-53 191
MsG0580027093.01.T01 AT5G23890 31.347 386 245 3 68 433 424 809 3.01e-53 192
MsG0580027093.01.T01 AT5G52410 29.843 382 244 5 73 432 232 611 4.57e-47 173
MsG0580027093.01.T01 AT5G52410 29.843 382 244 5 73 432 241 620 6.99e-47 172
MsG0580027093.01.T01 AT5G52410 30.000 370 235 5 85 432 2 369 5.75e-46 166

Find 97 sgRNAs with CRISPR-Local

Find 493 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCCATAAGAAACTTGATTT+TGG 0.095583 5:-52996355 None:intergenic
AACATCTCAGGGAGTTTATT+TGG 0.155851 5:+52996832 MsG0580027093.01.T01:CDS
CATTTCACGACAAGATTTAA+TGG 0.194973 5:+52996613 MsG0580027093.01.T01:CDS
CCTTGAATAGACTGAAAATC+TGG 0.271321 5:-52996303 None:intergenic
GAGGAGACATACAGAAGTTT+TGG 0.278868 5:+52998476 MsG0580027093.01.T01:CDS
CTCAGCTTCTAGCGTGGATT+TGG 0.326760 5:-52998791 None:intergenic
AGTGGAGCAATCCTGTGTTT+TGG 0.332072 5:-52996225 None:intergenic
TACATATATGACTCTTTCTA+AGG 0.336759 5:-52998701 None:intergenic
CCTTGAGGCAGCAAACAATT+TGG 0.339048 5:+52998552 MsG0580027093.01.T01:CDS
CCATCTAGCAAATTGTCTTC+TGG 0.339323 5:-52996063 None:intergenic
ACTCAAATTCATGTGCGTTT+AGG 0.343660 5:+52993118 MsG0580027093.01.T01:CDS
GCCGCTTGTGCTATTGTTGA+AGG 0.359144 5:-52998334 None:intergenic
AGACTGACAATGCTTCTTCT+TGG 0.368656 5:-52995329 None:intergenic
GCTCCACTTGTATCCTTGTC+TGG 0.379649 5:+52996240 MsG0580027093.01.T01:CDS
TGGGTGGAATCAGCTGAAAC+AGG 0.383185 5:-52995309 None:intergenic
TGGAGAACTCAGTTGGAGTA+TGG 0.383408 5:+52996638 MsG0580027093.01.T01:CDS
GCTATTGTTGAAGGTTTGTT+TGG 0.388614 5:-52998325 None:intergenic
GACTGACAATGCTTCTTCTT+GGG 0.391354 5:-52995328 None:intergenic
TAGTCCACATTCGTTGCAAC+GGG 0.404265 5:-52993162 None:intergenic
CTCTTCTGTCTCAGCTTGCC+TGG 0.404837 5:-52998431 None:intergenic
CCAGAAGACAATTTGCTAGA+TGG 0.408124 5:+52996063 MsG0580027093.01.T01:CDS
AGTTTGTGTAACGGCTTCTT+CGG 0.412979 5:-52993257 None:intergenic
ATTCAAGGTAATAAAAGTTA+TGG 0.418677 5:+52996318 MsG0580027093.01.T01:CDS
CAAGAACAGCAGCACGGGCT+TGG 0.419286 5:-52999808 None:intergenic
CTCAGGATGAGCTTCGACCT+TGG 0.420336 5:+52999990 MsG0580027093.01.T01:three_prime_UTR
CAAAGCTGTGGTGGAGGAGG+AGG 0.420420 5:+52993213 MsG0580027093.01.T01:CDS
AGGTAGGGCGAAGATGGAAA+TGG 0.431659 5:+52999834 MsG0580027093.01.T01:CDS
AGCTGTGGTGGAGGAGGAGG+AGG 0.433071 5:+52993216 MsG0580027093.01.T01:CDS
GTCAGTCTTAAAGAAGTTGA+AGG 0.433222 5:+52995344 MsG0580027093.01.T01:CDS
GCTGCTGTTCTTGCTGAGGT+AGG 0.441580 5:+52999818 MsG0580027093.01.T01:CDS
GAAGAAGCCGTTACACAAAC+TGG 0.442679 5:+52993259 MsG0580027093.01.T01:CDS
AAGAAGCTCTTCAGATGCTT+AGG 0.444868 5:+52998815 MsG0580027093.01.T01:CDS
TGAGAAAAGTAAGGGATTTG+TGG 0.446379 5:+52999967 MsG0580027093.01.T01:three_prime_UTR
CAGAACTTGGGTGGAGGATG+AGG 0.446384 5:+52999775 MsG0580027093.01.T01:intron
TGTGAAAGAGATAACATCTC+AGG 0.453337 5:+52996820 MsG0580027093.01.T01:CDS
GTTTATTTGGACATGTTGGC+AGG 0.460200 5:+52996845 MsG0580027093.01.T01:CDS
TTGCTGAGGTAGGGCGAAGA+TGG 0.461789 5:+52999828 MsG0580027093.01.T01:CDS
ATCTTTCAATGAGAAAAGTA+AGG 0.466665 5:+52999958 MsG0580027093.01.T01:three_prime_UTR
AATTAAATTAAATTCGTCGT+TGG 0.466853 5:+52996088 MsG0580027093.01.T01:CDS
CTGTGGCTCTGACAAGTGGC+AGG 0.483399 5:+52998356 MsG0580027093.01.T01:CDS
AACAATAGCACAAGCGGCTG+TGG 0.484660 5:+52998339 MsG0580027093.01.T01:CDS
TGTAACGGCTTCTTCGGCGG+TGG 0.486933 5:-52993251 None:intergenic
GATAGAATTGTGGGATGCAC+AGG 0.487562 5:+53000027 MsG0580027093.01.T01:three_prime_UTR
TTGGACATGTTGGCAGGAGA+TGG 0.489679 5:+52996851 MsG0580027093.01.T01:CDS
TATACTAGTGATAGAATTGT+GGG 0.501741 5:+53000018 MsG0580027093.01.T01:three_prime_UTR
CACGACAAGATTTAATGGAA+TGG 0.501939 5:+52996618 MsG0580027093.01.T01:CDS
GTATACTAGTGATAGAATTG+TGG 0.504716 5:+53000017 MsG0580027093.01.T01:three_prime_UTR
CTGCTGTTCTTGCTGAGGTA+GGG 0.507600 5:+52999819 MsG0580027093.01.T01:CDS
AATTAAATTCGTCGTTGGAA+AGG 0.507607 5:+52996093 MsG0580027093.01.T01:CDS
GACGTGCCTACATTCAAGCT+TGG 0.508002 5:-52999862 None:intergenic
CTCAGCAAGAACAGCAGCAC+GGG 0.513282 5:-52999813 None:intergenic
ATCAGAAACTACTGAAAAGC+CGG 0.517346 5:+52995272 MsG0580027093.01.T01:intron
AAGTAAGGGATTTGTGGCTC+AGG 0.522792 5:+52999973 MsG0580027093.01.T01:three_prime_UTR
TTTAAAAGAACAGGCAGCAA+TGG 0.526108 5:+52998615 MsG0580027093.01.T01:CDS
GGGAGTTTATTTGGACATGT+TGG 0.530766 5:+52996841 MsG0580027093.01.T01:CDS
AATGGAATGGAGAACTCAGT+TGG 0.531803 5:+52996631 MsG0580027093.01.T01:CDS
AGACAAAGCTGTGGTGGAGG+AGG 0.532022 5:+52993210 MsG0580027093.01.T01:CDS
ACAGGGATTGTAACTCGTGC+CGG 0.537941 5:-52995291 None:intergenic
TTTCTTTGGGATAATCGACC+AGG 0.543294 5:+52996664 MsG0580027093.01.T01:CDS
CCAAATTGTTTGCTGCCTCA+AGG 0.545169 5:-52998552 None:intergenic
GGTAGGGCGAAGATGGAAAT+GGG 0.546029 5:+52999835 MsG0580027093.01.T01:CDS
AAAACTTCTGTATGTCTCCT+CGG 0.550389 5:-52998474 None:intergenic
CTTGAATAGACTGAAAATCT+GGG 0.551420 5:-52996302 None:intergenic
ACCTTCAACAATAGCACAAG+CGG 0.555134 5:+52998333 MsG0580027093.01.T01:CDS
TGACAATGCTTCTTCTTGGG+TGG 0.559213 5:-52995325 None:intergenic
TTGCTTACCAGTTTGTGTAA+CGG 0.564352 5:-52993266 None:intergenic
GTAGTCCACATTCGTTGCAA+CGG 0.564803 5:-52993163 None:intergenic
TCGAGACAAAGCTGTGGTGG+AGG 0.568355 5:+52993207 MsG0580027093.01.T01:CDS
CAACCCCGTTGCAACGAATG+TGG 0.571360 5:+52993158 MsG0580027093.01.T01:CDS
TGAGTTGGGCAGAACTTGGG+TGG 0.572374 5:+52999766 MsG0580027093.01.T01:intron
GGATGCACAGGAGGTAACAT+TGG 0.575325 5:+53000039 MsG0580027093.01.T01:three_prime_UTR
TTCTTTCTCAGCTTCTAGCG+TGG 0.584584 5:-52998797 None:intergenic
GCGGCTGTGGCTCTGACAAG+TGG 0.587899 5:+52998352 MsG0580027093.01.T01:CDS
GTTGGGCAGAACTTGGGTGG+AGG 0.589062 5:+52999769 MsG0580027093.01.T01:intron
TTGTGTAACGGCTTCTTCGG+CGG 0.590028 5:-52993254 None:intergenic
GTCTCGATCACCACGAGTGG+TGG 0.605879 5:-52993191 None:intergenic
CTAGATAGTTGAAGATGATG+TGG 0.607544 5:+52996022 MsG0580027093.01.T01:intron
TCTTTCAATGAGAAAAGTAA+GGG 0.608905 5:+52999959 MsG0580027093.01.T01:three_prime_UTR
GAGCCAGACAAGGATACAAG+TGG 0.613465 5:-52996243 None:intergenic
CTTCCAGAAATCCAAAACAC+AGG 0.614162 5:+52996214 MsG0580027093.01.T01:intron
GGATGACCAAGCTTGAATGT+AGG 0.615956 5:+52999856 MsG0580027093.01.T01:exon
CCTCAGCAAGAACAGCAGCA+CGG 0.616599 5:-52999814 None:intergenic
AGAATTGTGGGATGCACAGG+AGG 0.618882 5:+53000030 MsG0580027093.01.T01:three_prime_UTR
GGGTGGAATCAGCTGAAACA+GGG 0.621108 5:-52995308 None:intergenic
CCGTGCTGCTGTTCTTGCTG+AGG 0.622982 5:+52999814 MsG0580027093.01.T01:CDS
TAGAAGCTGAGAATTCTGCC+AGG 0.623746 5:+52998413 MsG0580027093.01.T01:CDS
AGATCTGAGCTGCTTAGCCG+AGG 0.628615 5:+52998457 MsG0580027093.01.T01:CDS
TGATCGAGACAAAGCTGTGG+TGG 0.630354 5:+52993204 MsG0580027093.01.T01:CDS
TGTGGAGAGGCTTTACCTTG+AGG 0.631582 5:+52998537 MsG0580027093.01.T01:CDS
ATCACGGTTCTGATGTGGAG+AGG 0.639626 5:+52998524 MsG0580027093.01.T01:CDS
GTGAAAGAGATAACATCTCA+GGG 0.644252 5:+52996821 MsG0580027093.01.T01:CDS
ACTACAATTACCACCACTCG+TGG 0.646995 5:+52993181 MsG0580027093.01.T01:CDS
TTTGTCTCGATCACCACGAG+TGG 0.659518 5:-52993194 None:intergenic
ATCACTAGTATACAAAACCA+AGG 0.661144 5:-53000007 None:intergenic
ATTATCTACAGAGCCAGACA+AGG 0.678957 5:-52996253 None:intergenic
AGTCCACATTCGTTGCAACG+GGG 0.701987 5:-52993161 None:intergenic
TGGTGATCGAGACAAAGCTG+TGG 0.753030 5:+52993201 MsG0580027093.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTAAAAACTACTATT+AGG + Chr5:52994225-52994244 MsG0580027093.01.T01:intron 10.0%
!!! ATTTCATTTTTTTAATTGAT+AGG + Chr5:52997837-52997856 MsG0580027093.01.T01:intron 10.0%
!! AATTAGAGAAAAATATAAGA+GGG - Chr5:52997541-52997560 None:intergenic 15.0%
!! TAATTAGAGAAAAATATAAG+AGG - Chr5:52997542-52997561 None:intergenic 15.0%
!! TATATTATTGAATTCAATGA+GGG + Chr5:52997037-52997056 MsG0580027093.01.T01:intron 15.0%
!!! ATATTTTCTGTTTAAGATTA+AGG + Chr5:52995185-52995204 MsG0580027093.01.T01:intron 15.0%
!!! GAATGGTTTTTATATATATA+AGG + Chr5:52995380-52995399 MsG0580027093.01.T01:intron 15.0%
!!! GTTATAATTTTATTTACCAA+AGG + Chr5:52999900-52999919 MsG0580027093.01.T01:three_prime_UTR 15.0%
!!! TAATTTTTAAATATGCATGA+TGG + Chr5:52996717-52996736 MsG0580027093.01.T01:intron 15.0%
!!! TCTTTTTTAACAATATCAAA+TGG + Chr5:52998059-52998078 MsG0580027093.01.T01:intron 15.0%
!!! TGTAAACATCAAATTTTATT+CGG + Chr5:52994565-52994584 MsG0580027093.01.T01:intron 15.0%
!!! TTATATTTTTCTCTAATTAG+AGG + Chr5:52997543-52997562 MsG0580027093.01.T01:intron 15.0%
!!! TTCTTTCTTTATCTTTTTTT+AGG - Chr5:52999195-52999214 None:intergenic 15.0%
!! AAAAAGATAAAGAAAGAACA+TGG + Chr5:52999197-52999216 MsG0580027093.01.T01:intron 20.0%
!! AAACAATTCATATTTAGTTG+TGG - Chr5:52999672-52999691 None:intergenic 20.0%
!! AAACTGAAAATGAAAAAGAT+TGG - Chr5:52993733-52993752 None:intergenic 20.0%
!! AATTAAATTAAATTCGTCGT+TGG + Chr5:52996088-52996107 MsG0580027093.01.T01:CDS 20.0%
!! AGCCTAAAAGATAAAATAAT+AGG - Chr5:52998204-52998223 None:intergenic 20.0%
!! ATTCAAGGTAATAAAAGTTA+TGG + Chr5:52996318-52996337 MsG0580027093.01.T01:CDS 20.0%
!! CTTAAACAGAAATTATCAAA+AGG - Chr5:52999305-52999324 None:intergenic 20.0%
!! GTATATTATTGAATTCAATG+AGG + Chr5:52997036-52997055 MsG0580027093.01.T01:intron 20.0%
!! TATAAGAGAAACTATTAAGA+AGG + Chr5:52995014-52995033 MsG0580027093.01.T01:intron 20.0%
!! TTAAATAGCAACCATATTTA+GGG + Chr5:52994327-52994346 MsG0580027093.01.T01:intron 20.0%
!!! ACATAATTTTTTTTCCTGAT+AGG + Chr5:52996503-52996522 MsG0580027093.01.T01:intron 20.0%
!!! ACATTTAATTCTAGTTCAAA+TGG + Chr5:52994604-52994623 MsG0580027093.01.T01:intron 20.0%
!!! AGAATATTTTCTGTTAGAAA+TGG - Chr5:52997127-52997146 None:intergenic 20.0%
!!! ATATTCTTTTCATTACTTTC+AGG + Chr5:52994122-52994141 MsG0580027093.01.T01:intron 20.0%
!!! ATTATTTTATCTTTTAGGCT+AGG + Chr5:52998204-52998223 MsG0580027093.01.T01:intron 20.0%
!!! CAGTTTTTTCTTTTTCTTTT+TGG + Chr5:52995489-52995508 MsG0580027093.01.T01:intron 20.0%
!!! GAATATTTTCTGTTAGAAAT+GGG - Chr5:52997126-52997145 None:intergenic 20.0%
!!! TAAATAGTTTGTCAAAAGAT+TGG - Chr5:52999272-52999291 None:intergenic 20.0%
!!! TATTCTTTTCATTACTTTCA+GGG + Chr5:52994123-52994142 MsG0580027093.01.T01:intron 20.0%
!!! TGATGATTCTAAAAACATTA+AGG - Chr5:52994505-52994524 None:intergenic 20.0%
!!! TGCCTATTATTTTATCTTTT+AGG + Chr5:52998199-52998218 MsG0580027093.01.T01:intron 20.0%
!!! TTAATGTTTTTAGAATCATC+AGG + Chr5:52994504-52994523 MsG0580027093.01.T01:intron 20.0%
!!! TTATTTTATCTTTTAGGCTA+GGG + Chr5:52998205-52998224 MsG0580027093.01.T01:intron 20.0%
!!! TTGTAAATGTATTTTGAGTT+GGG + Chr5:52999752-52999771 MsG0580027093.01.T01:intron 20.0%
!!! TTTACTTTTCTGATATCTTA+GGG + Chr5:52993330-52993349 MsG0580027093.01.T01:intron 20.0%
!!! TTTTACTTTTCTGATATCTT+AGG + Chr5:52993329-52993348 MsG0580027093.01.T01:intron 20.0%
!!! TTTTATAAAGACAAGTAGTT+AGG + Chr5:52996694-52996713 MsG0580027093.01.T01:intron 20.0%
!!! TTTTTTAATTGATAGGAATC+CGG + Chr5:52997844-52997863 MsG0580027093.01.T01:intron 20.0%
! AAAAACTACTATTAGGATAC+TGG + Chr5:52994232-52994251 MsG0580027093.01.T01:intron 25.0%
! AAAACTACTATTAGGATACT+GGG + Chr5:52994233-52994252 MsG0580027093.01.T01:intron 25.0%
! AAATCAAGATAGTAACTGAA+TGG - Chr5:52998892-52998911 None:intergenic 25.0%
! AACTCTATAAGTCAAAGATA+CGG - Chr5:52999726-52999745 None:intergenic 25.0%
! AAGAAGGATCTAGATATTAA+TGG + Chr5:52995030-52995049 MsG0580027093.01.T01:intron 25.0%
! AAGTTATTTGAGTGGTTAAT+GGG - Chr5:52997401-52997420 None:intergenic 25.0%
! AATATTCACAACAAATAAGC+TGG - Chr5:52993302-52993321 None:intergenic 25.0%
! AATCAAAAAAGCAGGTTATA+TGG + Chr5:52996796-52996815 MsG0580027093.01.T01:CDS 25.0%
! AGAAGGATCTAGATATTAAT+GGG + Chr5:52995031-52995050 MsG0580027093.01.T01:intron 25.0%
! AGATAAGATATGATCATGAA+TGG - Chr5:52999442-52999461 None:intergenic 25.0%
! ATAGGTCTAATCTCAATAAA+GGG + Chr5:52994257-52994276 MsG0580027093.01.T01:intron 25.0%
! ATCTTTCAATGAGAAAAGTA+AGG + Chr5:52999958-52999977 MsG0580027093.01.T01:three_prime_UTR 25.0%
! ATGACTAATAGAAGATAGAT+TGG + Chr5:52994073-52994092 MsG0580027093.01.T01:intron 25.0%
! ATGGAAATCTAGATGTATTA+CGG - Chr5:52994425-52994444 None:intergenic 25.0%
! ATTAGTGAAGAGAAAAATCA+CGG + Chr5:52998508-52998527 MsG0580027093.01.T01:CDS 25.0%
! CACTATAAAACATTCAAAGA+CGG + Chr5:52994156-52994175 MsG0580027093.01.T01:intron 25.0%
! GTTAAATAGCAACCATATTT+AGG + Chr5:52994326-52994345 MsG0580027093.01.T01:intron 25.0%
! TAAATAGCAACCATATTTAG+GGG + Chr5:52994328-52994347 MsG0580027093.01.T01:intron 25.0%
! TAATGAAGAATGATCATATG+AGG + Chr5:52998254-52998273 MsG0580027093.01.T01:intron 25.0%
! TACATATATGACTCTTTCTA+AGG - Chr5:52998704-52998723 None:intergenic 25.0%
! TATAAGAAATTGCACTAATC+TGG - Chr5:52999383-52999402 None:intergenic 25.0%
! TATACTAGTGATAGAATTGT+GGG + Chr5:53000018-53000037 MsG0580027093.01.T01:three_prime_UTR 25.0%
! TATAGGTCTAATCTCAATAA+AGG + Chr5:52994256-52994275 MsG0580027093.01.T01:intron 25.0%
! TATCCATAACTAATTCTGTT+TGG - Chr5:52997216-52997235 None:intergenic 25.0%
! TCAAATTACATTGTACTGAA+TGG + Chr5:52996562-52996581 MsG0580027093.01.T01:intron 25.0%
! TCTTTCAATGAGAAAAGTAA+GGG + Chr5:52999959-52999978 MsG0580027093.01.T01:three_prime_UTR 25.0%
! TGTTGAGATGTCATTATATT+TGG + Chr5:52995512-52995531 MsG0580027093.01.T01:intron 25.0%
! TTAAATGTTTCGATCAAAAC+TGG - Chr5:52994592-52994611 None:intergenic 25.0%
! TTCTTACGAACAATAACAAT+TGG + Chr5:52996959-52996978 MsG0580027093.01.T01:intron 25.0%
! TTTGACAAATCAACATCTTA+AGG + Chr5:52993980-52993999 MsG0580027093.01.T01:intron 25.0%
!! ACAAAGAAACCCATTTTAAA+TGG - Chr5:52996194-52996213 None:intergenic 25.0%
!! ACCAAGATAAAAGCATAAAA+TGG - Chr5:52998151-52998170 None:intergenic 25.0%
!! ACTATATTAGGTTTTCTAAC+TGG + Chr5:52997919-52997938 MsG0580027093.01.T01:intron 25.0%
!! AGTATACTCAGAAAAGTTTT+TGG + Chr5:52996875-52996894 MsG0580027093.01.T01:CDS 25.0%
!! ATTTCTGTTTAAGTTCTCTT+TGG + Chr5:52999312-52999331 MsG0580027093.01.T01:intron 25.0%
!! CCAAGATAAAAGCATAAAAT+GGG - Chr5:52998150-52998169 None:intergenic 25.0%
!! CTATATTAGGTTTTCTAACT+GGG + Chr5:52997920-52997939 MsG0580027093.01.T01:intron 25.0%
!! GTCTAACTTAGTAATTTTCT+GGG + Chr5:52995797-52995816 MsG0580027093.01.T01:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - Chr5:52995006-52995025 None:intergenic 25.0%
!! TAGCATCACTGAAATTTTTA+AGG + Chr5:52993880-52993899 MsG0580027093.01.T01:intron 25.0%
!! TTGTGAATTAACTGTTTTAC+AGG + Chr5:52998283-52998302 MsG0580027093.01.T01:intron 25.0%
!! TTTTGATAGAACAAACACTA+TGG + Chr5:52995071-52995090 MsG0580027093.01.T01:intron 25.0%
!!! ACGATTTTGAAATAGGAATT+GGG - Chr5:52998922-52998941 None:intergenic 25.0%
!!! CACTGAAATTTTTAAGGTTA+AGG + Chr5:52993886-52993905 MsG0580027093.01.T01:intron 25.0%
!!! CTTGTAAATGTATTTTGAGT+TGG + Chr5:52999751-52999770 MsG0580027093.01.T01:intron 25.0%
!!! GTTGAAGGGAATTTTTTTAT+CGG + Chr5:52994671-52994690 MsG0580027093.01.T01:intron 25.0%
!!! TGAAATTTTTAAGGTTAAGG+AGG + Chr5:52993889-52993908 MsG0580027093.01.T01:intron 25.0%
!!! TGGCTTTTGAAAAAATCTAT+TGG - Chr5:52999579-52999598 None:intergenic 25.0%
!!! TTAGTCATTTTAGTCTAATG+TGG - Chr5:52994061-52994080 None:intergenic 25.0%
!!! TTTAATTCTAGTTCAAATGG+AGG + Chr5:52994607-52994626 MsG0580027093.01.T01:intron 25.0%
!!! TTTTTAATTGATAGGAATCC+GGG + Chr5:52997845-52997864 MsG0580027093.01.T01:intron 25.0%
AATTAAATTCGTCGTTGGAA+AGG + Chr5:52996093-52996112 MsG0580027093.01.T01:CDS 30.0%
AATTAAGTGTAGCAAAGATG+AGG + Chr5:52994761-52994780 MsG0580027093.01.T01:intron 30.0%
ACAAAACAAGCAAGAATTGA+GGG + Chr5:52995713-52995732 MsG0580027093.01.T01:intron 30.0%
ACACCTATAGTAGAAAAGAT+GGG + Chr5:52994865-52994884 MsG0580027093.01.T01:intron 30.0%
ACCCAAAATCAAGTTTCTTA+TGG + Chr5:52996353-52996372 MsG0580027093.01.T01:intron 30.0%
ACTAATAGAAGATAGATTGG+AGG + Chr5:52994076-52994095 MsG0580027093.01.T01:intron 30.0%
AGAGAAACATCAATACATAC+GGG - Chr5:52996920-52996939 None:intergenic 30.0%
AGTGATTGCTGAACTATATT+AGG + Chr5:52997907-52997926 MsG0580027093.01.T01:intron 30.0%
ATCACTAGTATACAAAACCA+AGG - Chr5:53000010-53000029 None:intergenic 30.0%
ATGATCATATCTTATCTCTG+GGG + Chr5:52999445-52999464 MsG0580027093.01.T01:intron 30.0%
ATTCCTATTTCAAAATCGTG+AGG + Chr5:52998923-52998942 MsG0580027093.01.T01:intron 30.0%
ATTGATCAATCTCTGGATAA+AGG + Chr5:52997249-52997268 MsG0580027093.01.T01:intron 30.0%
ATTGTTCGTAAGAAACGAAA+AGG - Chr5:52996953-52996972 None:intergenic 30.0%
CATGATCATATCTTATCTCT+GGG + Chr5:52999444-52999463 MsG0580027093.01.T01:intron 30.0%
CATTTCACGACAAGATTTAA+TGG + Chr5:52996613-52996632 MsG0580027093.01.T01:CDS 30.0%
CCAGTACATTGAACTAAATA+AGG - Chr5:52995605-52995624 None:intergenic 30.0%
CCCAAAATCAAGTTTCTTAT+GGG + Chr5:52996354-52996373 MsG0580027093.01.T01:intron 30.0%
CTATGGTAGCTAAATAATTG+TGG + Chr5:52999021-52999040 MsG0580027093.01.T01:intron 30.0%
CTTGAATAGACTGAAAATCT+GGG - Chr5:52996305-52996324 None:intergenic 30.0%
GAAGTTATTTGAGTGGTTAA+TGG - Chr5:52997402-52997421 None:intergenic 30.0%
GAATGTTATTGATCAATCTC+TGG + Chr5:52997242-52997261 MsG0580027093.01.T01:intron 30.0%
GAATTCTAGGCTTGAAATTA+TGG + Chr5:52995984-52996003 MsG0580027093.01.T01:intron 30.0%
GAGAGAAACATCAATACATA+CGG - Chr5:52996921-52996940 None:intergenic 30.0%
GAGTGAACAATTAAACATAG+TGG - Chr5:52998019-52998038 None:intergenic 30.0%
GGTAAGTTTATTCGAGAAAT+AGG - Chr5:52997621-52997640 None:intergenic 30.0%
GTACCAAACAGAATTAGTTA+TGG + Chr5:52997210-52997229 MsG0580027093.01.T01:intron 30.0%
GTATACTAGTGATAGAATTG+TGG + Chr5:53000017-53000036 MsG0580027093.01.T01:three_prime_UTR 30.0%
TACAAGAGTTAAGACTATGT+AGG - Chr5:52997452-52997471 None:intergenic 30.0%
TACCATAGCAATGTAAACTT+TGG - Chr5:52999009-52999028 None:intergenic 30.0%
TAGGTCTAATCTCAATAAAG+GGG + Chr5:52994258-52994277 MsG0580027093.01.T01:intron 30.0%
TCATGATCATATCTTATCTC+TGG + Chr5:52999443-52999462 MsG0580027093.01.T01:intron 30.0%
TCTAAAAACATTAAGGACAG+TGG - Chr5:52994498-52994517 None:intergenic 30.0%
TCTTGGAAGAATAGTTCAAA+TGG + Chr5:52996457-52996476 MsG0580027093.01.T01:intron 30.0%
TGTAACATTCTGATAGAAAC+TGG + Chr5:52997188-52997207 MsG0580027093.01.T01:intron 30.0%
TGTCGCATAAACATAATTCT+GGG - Chr5:52997888-52997907 None:intergenic 30.0%
TGTGAAGATTATAAGAGCAA+TGG - Chr5:52996541-52996560 None:intergenic 30.0%
TTCTCTAATTAGAGGTCTAA+CGG + Chr5:52997551-52997570 MsG0580027093.01.T01:intron 30.0%
TTGAATTCAATGAGGGTTTA+CGG + Chr5:52997044-52997063 MsG0580027093.01.T01:intron 30.0%
TTTATCTTGGTCTGTAAACT+GGG + Chr5:52998160-52998179 MsG0580027093.01.T01:intron 30.0%
! ATCTGAAATTCTTTGCTCTT+GGG + Chr5:52999348-52999367 MsG0580027093.01.T01:intron 30.0%
! ATTCTTCCAAGATAATTTGC+TGG - Chr5:52996449-52996468 None:intergenic 30.0%
! ATTTAGAGCTCAAAACATGT+TGG + Chr5:52996156-52996175 MsG0580027093.01.T01:intron 30.0%
! CACTTAATTTAAGTTCGTGT+TGG - Chr5:52994750-52994769 None:intergenic 30.0%
! CCCATAAGAAACTTGATTTT+GGG - Chr5:52996357-52996376 None:intergenic 30.0%
! CCCATTTTATGCTTTTATCT+TGG + Chr5:52998147-52998166 MsG0580027093.01.T01:intron 30.0%
! CCTTATTTAGTTCAATGTAC+TGG + Chr5:52995602-52995621 MsG0580027093.01.T01:intron 30.0%
! CGTCTAACTTAGTAATTTTC+TGG + Chr5:52995796-52995815 MsG0580027093.01.T01:intron 30.0%
! GCTGAAATATTTTATGCCTT+TGG - Chr5:52999919-52999938 None:intergenic 30.0%
! TCATATTTAGTTGTGGACTA+AGG - Chr5:52999665-52999684 None:intergenic 30.0%
! TGGAGTATGGATTTTTCTTT+GGG + Chr5:52996651-52996670 MsG0580027093.01.T01:CDS 30.0%
! TTGGAGTATGGATTTTTCTT+TGG + Chr5:52996650-52996669 MsG0580027093.01.T01:CDS 30.0%
! TTTTATCTTGGTCTGTAAAC+TGG + Chr5:52998159-52998178 MsG0580027093.01.T01:intron 30.0%
! TTTTCTGATATCTTAGGGTA+AGG + Chr5:52993335-52993354 MsG0580027093.01.T01:intron 30.0%
!! AAGGTTTGTTTCTAGAAGAA+TGG + Chr5:52995363-52995382 MsG0580027093.01.T01:intron 30.0%
!! AATGAAAGCATTAAAGAGAG+AGG + Chr5:52994829-52994848 MsG0580027093.01.T01:intron 30.0%
!! ATGAAAGCATTAAAGAGAGA+GGG + Chr5:52994830-52994849 MsG0580027093.01.T01:intron 30.0%
!! TGTAATTTGTTCTCTCACAT+TGG + Chr5:52995905-52995924 MsG0580027093.01.T01:intron 30.0%
!! TGTGGTTTTACCATTCAATT+TGG + Chr5:52993923-52993942 MsG0580027093.01.T01:intron 30.0%
!! TTCTTCCAAGATAATTTGCT+GGG - Chr5:52996448-52996467 None:intergenic 30.0%
!!! AATCCTCACGATTTTGAAAT+AGG - Chr5:52998929-52998948 None:intergenic 30.0%
!!! ACAGTGGTTTTGTTTAAATC+TGG - Chr5:52999599-52999618 None:intergenic 30.0%
!!! AGTTTTTGGTATGATCTCTT+AGG + Chr5:52996889-52996908 MsG0580027093.01.T01:intron 30.0%
!!! CACGATTTTGAAATAGGAAT+TGG - Chr5:52998923-52998942 None:intergenic 30.0%
!!! CGCTGATTTTTTAAAAGAAC+AGG + Chr5:52998606-52998625 MsG0580027093.01.T01:CDS 30.0%
!!! GGAATTTTTTTATCGGAAAG+TGG + Chr5:52994678-52994697 MsG0580027093.01.T01:intron 30.0%
AAAACTTCTGTATGTCTCCT+CGG - Chr5:52998477-52998496 None:intergenic 35.0%
AAAATTCCCTTCAACTTGAG+TGG - Chr5:52994666-52994685 None:intergenic 35.0%
AAAGAATTTCAGATGCAGGA+GGG - Chr5:52999342-52999361 None:intergenic 35.0%
AAAGCCACAATAGTGATTAG+TGG + Chr5:52998951-52998970 MsG0580027093.01.T01:intron 35.0%
AAATGAAAATTTGCGCACAG+TGG - Chr5:52999615-52999634 None:intergenic 35.0%
AACATCTCAGGGAGTTTATT+TGG + Chr5:52996832-52996851 MsG0580027093.01.T01:CDS 35.0%
AACTCATGTTCTGTCTTCTA+TGG + Chr5:52993620-52993639 MsG0580027093.01.T01:intron 35.0%
AACTGGGTTAATGAATGAAG+TGG + Chr5:52998176-52998195 MsG0580027093.01.T01:intron 35.0%
AAGCCACAATAGTGATTAGT+GGG + Chr5:52998952-52998971 MsG0580027093.01.T01:intron 35.0%
ACTATTAGGATACTGGGTAT+AGG + Chr5:52994239-52994258 MsG0580027093.01.T01:intron 35.0%
ACTCAAATTCATGTGCGTTT+AGG + Chr5:52993118-52993137 MsG0580027093.01.T01:CDS 35.0%
AGAAAAGATGGGTAGAAACT+AGG + Chr5:52994876-52994895 MsG0580027093.01.T01:intron 35.0%
AGAAACATCAATACATACGG+GGG - Chr5:52996918-52996937 None:intergenic 35.0%
AGACTATGTAGGAAAAGACA+TGG - Chr5:52997441-52997460 None:intergenic 35.0%
AGGAAAAGACATGGGAAAAT+TGG - Chr5:52997432-52997451 None:intergenic 35.0%
AGGTTTCTGTGTAGAAAATG+AGG - Chr5:52993792-52993811 None:intergenic 35.0%
AGTAAGGAGAATAGATCAGA+TGG + Chr5:52994943-52994962 MsG0580027093.01.T01:intron 35.0%
ATCAGAAACTACTGAAAAGC+CGG + Chr5:52995272-52995291 MsG0580027093.01.T01:intron 35.0%
ATGAGATGTAGCACTATTGA+TGG - Chr5:52994444-52994463 None:intergenic 35.0%
CACAAATTTATGCCTACCAT+AGG - Chr5:52995856-52995875 None:intergenic 35.0%
CACACCTATAGTAGAAAAGA+TGG + Chr5:52994864-52994883 MsG0580027093.01.T01:intron 35.0%
CACGACAAGATTTAATGGAA+TGG + Chr5:52996618-52996637 MsG0580027093.01.T01:CDS 35.0%
CACGTTAGTGACTCAAAAAA+AGG + Chr5:52993707-52993726 MsG0580027093.01.T01:intron 35.0%
CAGGTATCAATCAAAAAAGC+AGG + Chr5:52996788-52996807 MsG0580027093.01.T01:intron 35.0%
CCACTCAAATAACTTCCTAA+TGG + Chr5:52997406-52997425 MsG0580027093.01.T01:intron 35.0%
CCATTAGGAAGTTATTTGAG+TGG - Chr5:52997409-52997428 None:intergenic 35.0%
CCTATTCAATGCTAAAGTCT+TGG + Chr5:52996405-52996424 MsG0580027093.01.T01:intron 35.0%
CCTCAAACAAAGAGAGAAAT+CGG - Chr5:52997956-52997975 None:intergenic 35.0%
CCTTGAATAGACTGAAAATC+TGG - Chr5:52996306-52996325 None:intergenic 35.0%
CTAGATAGTTGAAGATGATG+TGG + Chr5:52996022-52996041 MsG0580027093.01.T01:intron 35.0%
CTCAAACAAAGAGAGAAATC+GGG - Chr5:52997955-52997974 None:intergenic 35.0%
CTGATATGCAGGGTAAAAAA+AGG - Chr5:52995257-52995276 None:intergenic 35.0%
CTGTCGCATAAACATAATTC+TGG - Chr5:52997889-52997908 None:intergenic 35.0%
CTTCAATGCAAGTTTGAATC+TGG - Chr5:52993854-52993873 None:intergenic 35.0%
CTTGAGAATTTCTGCATGAA+GGG + Chr5:52995820-52995839 MsG0580027093.01.T01:intron 35.0%
GACAAAACAAGCAAGAATTG+AGG + Chr5:52995712-52995731 MsG0580027093.01.T01:intron 35.0%
GACAAATCAACATCTTAAGG+TGG + Chr5:52993983-52994002 MsG0580027093.01.T01:intron 35.0%
GACTATGTAGGAAAAGACAT+GGG - Chr5:52997440-52997459 None:intergenic 35.0%
GAGAAACATCAATACATACG+GGG - Chr5:52996919-52996938 None:intergenic 35.0%
GCAAGTTTGAATCTGGTAAT+GGG - Chr5:52993847-52993866 None:intergenic 35.0%
GGAATACAAATTCACCTATC+AGG - Chr5:52996520-52996539 None:intergenic 35.0%
GGAGTCATTTGTTTCGATAT+TGG + Chr5:52995643-52995662 MsG0580027093.01.T01:intron 35.0%
GGTTTCTGTGTAGAAAATGA+GGG - Chr5:52993791-52993810 None:intergenic 35.0%
GTCAGTCTTAAAGAAGTTGA+AGG + Chr5:52995344-52995363 MsG0580027093.01.T01:CDS 35.0%
GTCCAAAGTTTACATTGCTA+TGG + Chr5:52999004-52999023 MsG0580027093.01.T01:intron 35.0%
GTGAAAGAGATAACATCTCA+GGG + Chr5:52996821-52996840 MsG0580027093.01.T01:CDS 35.0%
GTTTCTGTGTAGAAAATGAG+GGG - Chr5:52993790-52993809 None:intergenic 35.0%
TAACTGAATGGATACTTGAC+TGG - Chr5:52998880-52998899 None:intergenic 35.0%
TAGACAGACTCTCCAAAAAA+TGG - Chr5:52993563-52993582 None:intergenic 35.0%
TATTTGAGTGGTTAATGGGA+GGG - Chr5:52997397-52997416 None:intergenic 35.0%
TCAAACTGATGCAACACATT+AGG - Chr5:52993965-52993984 None:intergenic 35.0%
TCAAAGATACGGTACTAATC+TGG - Chr5:52999715-52999734 None:intergenic 35.0%
TCAGTAGTTTCTGATATGCA+GGG - Chr5:52995267-52995286 None:intergenic 35.0%
TCTTTATAAAACCACGTACC+TGG - Chr5:52996685-52996704 None:intergenic 35.0%
TGACAGCTATCAAGATTTCA+CGG + Chr5:52994016-52994035 MsG0580027093.01.T01:intron 35.0%
TGAGAAAAGTAAGGGATTTG+TGG + Chr5:52999967-52999986 MsG0580027093.01.T01:three_prime_UTR 35.0%
TGCAAGTTTGAATCTGGTAA+TGG - Chr5:52993848-52993867 None:intergenic 35.0%
TGTGAAAGAGATAACATCTC+AGG + Chr5:52996820-52996839 MsG0580027093.01.T01:CDS 35.0%
TGTTTATGCAGCAGTTAGTT+GGG + Chr5:52994304-52994323 MsG0580027093.01.T01:intron 35.0%
TTACCATTCAATTTGGTCCT+TGG + Chr5:52993930-52993949 MsG0580027093.01.T01:intron 35.0%
TTATTTGAGTGGTTAATGGG+AGG - Chr5:52997398-52997417 None:intergenic 35.0%
TTCAGTAGTTTCTGATATGC+AGG - Chr5:52995268-52995287 None:intergenic 35.0%
TTGCTTACCAGTTTGTGTAA+CGG - Chr5:52993269-52993288 None:intergenic 35.0%
TTGTTTATGCAGCAGTTAGT+TGG + Chr5:52994303-52994322 MsG0580027093.01.T01:intron 35.0%
TTTAAAAGAACAGGCAGCAA+TGG + Chr5:52998615-52998634 MsG0580027093.01.T01:CDS 35.0%
TTTATCGGAAAGTGGTAAGA+CGG + Chr5:52994686-52994705 MsG0580027093.01.T01:intron 35.0%
! AACAGTTGATGCACTTTGTA+CGG - Chr5:52994397-52994416 None:intergenic 35.0%
! AAGGAGGATGAACAATTTTG+TGG + Chr5:52993905-52993924 MsG0580027093.01.T01:intron 35.0%
! AGGAGACATACAGAAGTTTT+GGG + Chr5:52998477-52998496 MsG0580027093.01.T01:CDS 35.0%
! ATTTCAGCCATCATGCTTTT+TGG + Chr5:52999931-52999950 MsG0580027093.01.T01:three_prime_UTR 35.0%
! CAAGTTTGAATCTGGTAATG+GGG - Chr5:52993846-52993865 None:intergenic 35.0%
! CATCTGAAATTCTTTGCTCT+TGG + Chr5:52999347-52999366 MsG0580027093.01.T01:intron 35.0%
! CCAAGACTTTAGCATTGAAT+AGG - Chr5:52996408-52996427 None:intergenic 35.0%
! CCAGATTTTCAGTCTATTCA+AGG + Chr5:52996303-52996322 MsG0580027093.01.T01:CDS 35.0%
! CGATTTCTCTCTTTGTTTGA+GGG + Chr5:52997954-52997973 MsG0580027093.01.T01:intron 35.0%
! CTACCCATCTTTTCTACTAT+AGG - Chr5:52994871-52994890 None:intergenic 35.0%
! GAGTTACGATTTTCACTTCA+TGG - Chr5:52997770-52997789 None:intergenic 35.0%
! GATCATACCAAAAAGCATGA+TGG - Chr5:52999941-52999960 None:intergenic 35.0%
! GCCCATAAGAAACTTGATTT+TGG - Chr5:52996358-52996377 None:intergenic 35.0%
! GCTATTGTTGAAGGTTTGTT+TGG - Chr5:52998328-52998347 None:intergenic 35.0%
! GGATCTAGATATTAATGGGT+TGG + Chr5:52995035-52995054 MsG0580027093.01.T01:intron 35.0%
!! AAAGTACCACTCAAGTTGAA+GGG + Chr5:52994657-52994676 MsG0580027093.01.T01:intron 35.0%
!! AAGTTTGAATCTGGTAATGG+GGG - Chr5:52993845-52993864 None:intergenic 35.0%
!! AATCCTGTGTTTTGGATTTC+TGG - Chr5:52996220-52996239 None:intergenic 35.0%
!! GCAGAAAGTATTAGAAAGAG+TGG + Chr5:52997315-52997334 MsG0580027093.01.T01:intron 35.0%
!! GCATAAATTTGTGCTGCTTA+GGG + Chr5:52995863-52995882 MsG0580027093.01.T01:intron 35.0%
!! TCTTCCAAGATAATTTGCTG+GGG - Chr5:52996447-52996466 None:intergenic 35.0%
!!! AAGGTTTGGAGTTGGTATTT+TGG + Chr5:52998975-52998994 MsG0580027093.01.T01:intron 35.0%
!!! CTGCTTTTTTGATTGATACC+TGG - Chr5:52996790-52996809 None:intergenic 35.0%
!!! CTGTCTGGTAAACCATTTTT+TGG + Chr5:52993548-52993567 MsG0580027093.01.T01:intron 35.0%
!!! TTGGAGTTGGTATTTTGGTT+TGG + Chr5:52998980-52998999 MsG0580027093.01.T01:intron 35.0%
AAACTGGTAAGCAACCACAA+TGG + Chr5:52993275-52993294 MsG0580027093.01.T01:intron 40.0%
AAATCACTAGTGGTAGGGTA+GGG + Chr5:52994975-52994994 MsG0580027093.01.T01:intron 40.0%
AAGAAGCTCTTCAGATGCTT+AGG + Chr5:52998815-52998834 MsG0580027093.01.T01:CDS 40.0%
AAGCATTAAAGAGAGAGGGT+TGG + Chr5:52994834-52994853 MsG0580027093.01.T01:intron 40.0%
AAGGAGAATAGATCAGATGG+AGG + Chr5:52994946-52994965 MsG0580027093.01.T01:intron 40.0%
AATGGAATGGAGAACTCAGT+TGG + Chr5:52996631-52996650 MsG0580027093.01.T01:CDS 40.0%
AATTCAATGAGGGTTTACGG+AGG + Chr5:52997047-52997066 MsG0580027093.01.T01:intron 40.0%
ACAAATAAGCTGGTCCATTG+TGG - Chr5:52993292-52993311 None:intergenic 40.0%
ACACTGATGTGAAATACCCA+GGG + Chr5:52993681-52993700 MsG0580027093.01.T01:intron 40.0%
ACATGGGAAAATTGGCCATT+AGG - Chr5:52997424-52997443 None:intergenic 40.0%
ACATGTTGCTAACTTCAGCT+CGG + Chr5:52993453-52993472 MsG0580027093.01.T01:intron 40.0%
ACCTGGACTGTAAAAAAGTC+AGG - Chr5:52996773-52996792 None:intergenic 40.0%
ACCTTCAACAATAGCACAAG+CGG + Chr5:52998333-52998352 MsG0580027093.01.T01:CDS 40.0%
AGACTGACAATGCTTCTTCT+TGG - Chr5:52995332-52995351 None:intergenic 40.0%
AGCAAACAAGTTTCTACACG+TGG - Chr5:52999109-52999128 None:intergenic 40.0%
AGCATTAAAGAGAGAGGGTT+GGG + Chr5:52994835-52994854 MsG0580027093.01.T01:intron 40.0%
AGCGATTCGCAATACTTGAA+GGG - Chr5:52993523-52993542 None:intergenic 40.0%
AGGAGAATAGATCAGATGGA+GGG + Chr5:52994947-52994966 MsG0580027093.01.T01:intron 40.0%
AGGGTTATTCCTATGCATCT+AGG + Chr5:52998224-52998243 MsG0580027093.01.T01:intron 40.0%
AGTTTGTGTAACGGCTTCTT+CGG - Chr5:52993260-52993279 None:intergenic 40.0%
ATAGCAACCATATTTAGGGG+AGG + Chr5:52994331-52994350 MsG0580027093.01.T01:intron 40.0%
ATCTGCATTTCCGGAAACTT+GGG + Chr5:52997797-52997816 MsG0580027093.01.T01:intron 40.0%
ATGCCAAGGACCAAATTGAA+TGG - Chr5:52993936-52993955 None:intergenic 40.0%
ATTATCTACAGAGCCAGACA+AGG - Chr5:52996256-52996275 None:intergenic 40.0%
ATTCAAAGATCGCAGGATTG+TGG - Chr5:52997699-52997718 None:intergenic 40.0%
CAAAGAATTTCAGATGCAGG+AGG - Chr5:52999343-52999362 None:intergenic 40.0%
CAAAGATGAGGATGTTGTGT+TGG + Chr5:52994773-52994792 MsG0580027093.01.T01:intron 40.0%
CAAGCAAGAATTGAGGGAAA+AGG + Chr5:52995719-52995738 MsG0580027093.01.T01:intron 40.0%
CACAATAGTGATTAGTGGGA+AGG + Chr5:52998956-52998975 MsG0580027093.01.T01:intron 40.0%
CAGACAAGTAGTATTCACCT+AGG + Chr5:52995403-52995422 MsG0580027093.01.T01:intron 40.0%
CCAATTCTTGAAGAACCCAT+TGG - Chr5:52997362-52997381 None:intergenic 40.0%
CCATCTAGCAAATTGTCTTC+TGG - Chr5:52996066-52996085 None:intergenic 40.0%
CCTCACTTATTACCAATCTC+CGG + Chr5:52993420-52993439 MsG0580027093.01.T01:intron 40.0%
CTCCTTACTATAGAATCCAC+AGG - Chr5:52994932-52994951 None:intergenic 40.0%
CTTAGTTGCTTAACTCTGAG+AGG + Chr5:52993646-52993665 MsG0580027093.01.T01:intron 40.0%
CTTCCAGAAATCCAAAACAC+AGG + Chr5:52996214-52996233 MsG0580027093.01.T01:intron 40.0%
CTTCCCACTAATCACTATTG+TGG - Chr5:52998958-52998977 None:intergenic 40.0%
GAATAAACTTACCACACCCT+GGG + Chr5:52997628-52997647 MsG0580027093.01.T01:intron 40.0%
GACCTGTGGATTCTATAGTA+AGG + Chr5:52994927-52994946 MsG0580027093.01.T01:intron 40.0%
GACTGACAATGCTTCTTCTT+GGG - Chr5:52995331-52995350 None:intergenic 40.0%
GAGCAAAGAATTTCAGATGC+AGG - Chr5:52999346-52999365 None:intergenic 40.0%
GAGTCAAATCACTAGTGGTA+GGG + Chr5:52994970-52994989 MsG0580027093.01.T01:intron 40.0%
GCACTCTTTAGTGGAATTCT+AGG + Chr5:52995971-52995990 MsG0580027093.01.T01:intron 40.0%
GCTTGAGAATTTCTGCATGA+AGG + Chr5:52995819-52995838 MsG0580027093.01.T01:intron 40.0%
GGGAGTTTATTTGGACATGT+TGG + Chr5:52996841-52996860 MsG0580027093.01.T01:CDS 40.0%
GTTCTTCAAGAATTGGAGCT+TGG + Chr5:52997366-52997385 MsG0580027093.01.T01:intron 40.0%
GTTTATTTGGACATGTTGGC+AGG + Chr5:52996845-52996864 MsG0580027093.01.T01:CDS 40.0%
TAGCAACCATATTTAGGGGA+GGG + Chr5:52994332-52994351 MsG0580027093.01.T01:intron 40.0%
TAGTGATTAGTGGGAAGGTT+TGG + Chr5:52998961-52998980 MsG0580027093.01.T01:intron 40.0%
TATTGCACTCCTAGATGCAT+AGG - Chr5:52998236-52998255 None:intergenic 40.0%
TGACGTAGATGAATGATGCA+CGG - Chr5:52996126-52996145 None:intergenic 40.0%
TGCGTGGCTTCCATTTAAAA+TGG + Chr5:52996181-52996200 MsG0580027093.01.T01:intron 40.0%
TGTGTTTGTGCACTCTTTAG+TGG + Chr5:52995962-52995981 MsG0580027093.01.T01:intron 40.0%
TTATCGGAAAGTGGTAAGAC+GGG + Chr5:52994687-52994706 MsG0580027093.01.T01:intron 40.0%
! ACAAGCTCACAGTTTTCCAA+TGG + Chr5:52997343-52997362 MsG0580027093.01.T01:intron 40.0%
! CAAGCTCACAGTTTTCCAAT+GGG + Chr5:52997344-52997363 MsG0580027093.01.T01:intron 40.0%
! CCAATGGGTTCTTCAAGAAT+TGG + Chr5:52997359-52997378 MsG0580027093.01.T01:intron 40.0%
! CCGATTTCTCTCTTTGTTTG+AGG + Chr5:52997953-52997972 MsG0580027093.01.T01:intron 40.0%
! CGGAGATTGGTAATAAGTGA+GGG - Chr5:52993422-52993441 None:intergenic 40.0%
! GAAAAATCACGGTTCTGATG+TGG + Chr5:52998519-52998538 MsG0580027093.01.T01:CDS 40.0%
! GAGGAGACATACAGAAGTTT+TGG + Chr5:52998476-52998495 MsG0580027093.01.T01:CDS 40.0%
! GCAACATGTTGATTACACAC+CGG - Chr5:52993442-52993461 None:intergenic 40.0%
! GCGTGGCTTCCATTTAAAAT+GGG + Chr5:52996182-52996201 MsG0580027093.01.T01:intron 40.0%
! GTTTTCCTGAAAACTCAACC+CGG - Chr5:52997866-52997885 None:intergenic 40.0%
!! CCAGAAGACAATTTGCTAGA+TGG + Chr5:52996063-52996082 MsG0580027093.01.T01:CDS 40.0%
!! GAAAGTACCACTCAAGTTGA+AGG + Chr5:52994656-52994675 MsG0580027093.01.T01:intron 40.0%
!! GGCATAAATTTGTGCTGCTT+AGG + Chr5:52995862-52995881 MsG0580027093.01.T01:intron 40.0%
!! TAATGGGTTGGAGAAAGACA+TGG + Chr5:52995047-52995066 MsG0580027093.01.T01:intron 40.0%
!! TCAAAACATGTTGGTTTGCG+TGG + Chr5:52996165-52996184 MsG0580027093.01.T01:intron 40.0%
!! TTTCTTTGGGATAATCGACC+AGG + Chr5:52996664-52996683 MsG0580027093.01.T01:CDS 40.0%
!!! ACCTGACTTTTTTACAGTCC+AGG + Chr5:52996769-52996788 MsG0580027093.01.T01:intron 40.0%
!!! ATTTTGAGTTGGGCAGAACT+TGG + Chr5:52999762-52999781 MsG0580027093.01.T01:intron 40.0%
!!! TTTTGAGTTGGGCAGAACTT+GGG + Chr5:52999763-52999782 MsG0580027093.01.T01:intron 40.0%
AAGGGGCTGAGTAAGGAAAT+TGG + Chr5:52994275-52994294 MsG0580027093.01.T01:intron 45.0%
AAGTAAGGGATTTGTGGCTC+AGG + Chr5:52999973-52999992 MsG0580027093.01.T01:three_prime_UTR 45.0%
AATCACTAGTGGTAGGGTAG+GGG + Chr5:52994976-52994995 MsG0580027093.01.T01:intron 45.0%
ACATGTAGAGAGAAGACCTG+TGG + Chr5:52994913-52994932 MsG0580027093.01.T01:intron 45.0%
ACATTAGGTCTCACATGCCA+AGG - Chr5:52993950-52993969 None:intergenic 45.0%
ACTACAATTACCACCACTCG+TGG + Chr5:52993181-52993200 MsG0580027093.01.T01:CDS 45.0%
AGGATGTTGTGTTGGATGTG+TGG + Chr5:52994781-52994800 MsG0580027093.01.T01:intron 45.0%
AGGCGTGTGTGATATGCTAT+CGG - Chr5:52997601-52997620 None:intergenic 45.0%
AGGGGCTGAGTAAGGAAATT+GGG + Chr5:52994276-52994295 MsG0580027093.01.T01:intron 45.0%
ATGAGGGTTTACGGAGGAAA+TGG + Chr5:52997053-52997072 MsG0580027093.01.T01:intron 45.0%
CAAATCACTAGTGGTAGGGT+AGG + Chr5:52994974-52994993 MsG0580027093.01.T01:intron 45.0%
CACACTGATGTGAAATACCC+AGG + Chr5:52993680-52993699 MsG0580027093.01.T01:intron 45.0%
CATATTTAGGGGAGGGAACA+TGG + Chr5:52994339-52994358 MsG0580027093.01.T01:intron 45.0%
CATCTGCATTTCCGGAAACT+TGG + Chr5:52997796-52997815 MsG0580027093.01.T01:intron 45.0%
CATGTTCCCTCCCCTAAATA+TGG - Chr5:52994341-52994360 None:intergenic 45.0%
CCTTGAGGCAGCAAACAATT+TGG + Chr5:52998552-52998571 MsG0580027093.01.T01:CDS 45.0%
CGAATAAACTTACCACACCC+TGG + Chr5:52997627-52997646 MsG0580027093.01.T01:intron 45.0%
CGCAGGATTGTGGTAACATT+GGG - Chr5:52997689-52997708 None:intergenic 45.0%
CGCATCACATAAAACACCTG+AGG - Chr5:52994637-52994656 None:intergenic 45.0%
CGTGGGTCAATTGATGCTAT+TGG + Chr5:52999233-52999252 MsG0580027093.01.T01:intron 45.0%
CTCAATAAAGGGGCTGAGTA+AGG + Chr5:52994268-52994287 MsG0580027093.01.T01:intron 45.0%
GAAACTAGGCTTAGGTGGTT+TGG + Chr5:52994890-52994909 MsG0580027093.01.T01:intron 45.0%
GAAGAAGCCGTTACACAAAC+TGG + Chr5:52993259-52993278 MsG0580027093.01.T01:CDS 45.0%
GACGTAGATGAATGATGCAC+GGG - Chr5:52996125-52996144 None:intergenic 45.0%
GAGCGATTCGCAATACTTGA+AGG - Chr5:52993524-52993543 None:intergenic 45.0%
GAGGGAAATTCAAAGATCGC+AGG - Chr5:52997706-52997725 None:intergenic 45.0%
GAGTTGTACAGAGTACACCT+AGG - Chr5:52995423-52995442 None:intergenic 45.0%
GATAGAATTGTGGGATGCAC+AGG + Chr5:53000027-53000046 MsG0580027093.01.T01:three_prime_UTR 45.0%
GATGGGTAGAAACTAGGCTT+AGG + Chr5:52994882-52994901 MsG0580027093.01.T01:intron 45.0%
GCATTAAAGAGAGAGGGTTG+GGG + Chr5:52994836-52994855 MsG0580027093.01.T01:intron 45.0%
GGAGAATAGATCAGATGGAG+GGG + Chr5:52994948-52994967 MsG0580027093.01.T01:intron 45.0%
GGAGTCAAATCACTAGTGGT+AGG + Chr5:52994969-52994988 MsG0580027093.01.T01:intron 45.0%
GGATGACCAAGCTTGAATGT+AGG + Chr5:52999856-52999875 MsG0580027093.01.T01:exon 45.0%
GTAGTCCACATTCGTTGCAA+CGG - Chr5:52993166-52993185 None:intergenic 45.0%
GTTGATTACACACCGGAGAT+TGG - Chr5:52993435-52993454 None:intergenic 45.0%
TAGAAGCTGAGAATTCTGCC+AGG + Chr5:52998413-52998432 MsG0580027093.01.T01:CDS 45.0%
TAGTCCACATTCGTTGCAAC+GGG - Chr5:52993165-52993184 None:intergenic 45.0%
TCAAAACCGACCCAAGTTTC+CGG - Chr5:52997810-52997829 None:intergenic 45.0%
TCGCAGGATTGTGGTAACAT+TGG - Chr5:52997690-52997709 None:intergenic 45.0%
TCTGTGTAGAAAATGAGGGG+TGG - Chr5:52993787-52993806 None:intergenic 45.0%
TCTTTGAATTTCCCTCCGTG+CGG + Chr5:52997710-52997729 MsG0580027093.01.T01:intron 45.0%
TGACAATGCTTCTTCTTGGG+TGG - Chr5:52995328-52995347 None:intergenic 45.0%
TGGAGAACTCAGTTGGAGTA+TGG + Chr5:52996638-52996657 MsG0580027093.01.T01:CDS 45.0%
TGGTCCCCAGCAAATTATCT+TGG + Chr5:52996440-52996459 MsG0580027093.01.T01:intron 45.0%
TTCCACACTTATAGACCTCC+AGG - Chr5:52993597-52993616 None:intergenic 45.0%
TTCTTTCTCAGCTTCTAGCG+TGG - Chr5:52998800-52998819 None:intergenic 45.0%
! AAGCCTTTTCCCACTAAGTG+GGG - Chr5:52995123-52995142 None:intergenic 45.0%
! AGTGGAGCAATCCTGTGTTT+TGG - Chr5:52996228-52996247 None:intergenic 45.0%
! CAAGCCTTTTCCCACTAAGT+GGG - Chr5:52995124-52995143 None:intergenic 45.0%
! CCAAATTGTTTGCTGCCTCA+AGG - Chr5:52998555-52998574 None:intergenic 45.0%
! CCGGAGATTGGTAATAAGTG+AGG - Chr5:52993423-52993442 None:intergenic 45.0%
! TACGGTACTAATCTGGAGCA+CGG - Chr5:52999708-52999727 None:intergenic 45.0%
! TGGCATTTGCTGAACATTGC+TGG + Chr5:52995622-52995641 MsG0580027093.01.T01:intron 45.0%
! TTAGTGGGAAGGTTTGGAGT+TGG + Chr5:52998967-52998986 MsG0580027093.01.T01:intron 45.0%
!! ATACCTGTTGTTTCGCTGCT+AGG + Chr5:52993372-52993391 MsG0580027093.01.T01:intron 45.0%
AAAATGAGGGGTGGCATGGA+TGG - Chr5:52993778-52993797 None:intergenic 50.0%
AAATGAGGGGTGGCATGGAT+GGG - Chr5:52993777-52993796 None:intergenic 50.0%
AACAATAGCACAAGCGGCTG+TGG + Chr5:52998339-52998358 MsG0580027093.01.T01:CDS 50.0%
ACAATGCCCGCTAACCTAAG+TGG - Chr5:52993399-52993418 None:intergenic 50.0%
ACAGGGATTGTAACTCGTGC+CGG - Chr5:52995294-52995313 None:intergenic 50.0%
AGAATTGTGGGATGCACAGG+AGG + Chr5:53000030-53000049 MsG0580027093.01.T01:three_prime_UTR 50.0%
AGCTGATCCAGCATCACCAA+TGG - Chr5:52997655-52997674 None:intergenic 50.0%
AGGTAGGGCGAAGATGGAAA+TGG + Chr5:52999834-52999853 MsG0580027093.01.T01:CDS 50.0%
AGTCACTAACGTGAGTCCCT+GGG - Chr5:52993700-52993719 None:intergenic 50.0%
AGTCCACATTCGTTGCAACG+GGG - Chr5:52993164-52993183 None:intergenic 50.0%
CAATGCCCGCTAACCTAAGT+GGG - Chr5:52993398-52993417 None:intergenic 50.0%
CCACTTAGTGGGAAAAGGCT+TGG + Chr5:52995122-52995141 MsG0580027093.01.T01:intron 50.0%
CGTGTGTGATATGCTATCGG+AGG - Chr5:52997598-52997617 None:intergenic 50.0%
CTCAGCTTCTAGCGTGGATT+TGG - Chr5:52998794-52998813 None:intergenic 50.0%
CTGCTGTTCTTGCTGAGGTA+GGG + Chr5:52999819-52999838 MsG0580027093.01.T01:CDS 50.0%
GAAGGGCTACACGTATCCTA+TGG + Chr5:52995837-52995856 MsG0580027093.01.T01:intron 50.0%
GACGTGCCTACATTCAAGCT+TGG - Chr5:52999865-52999884 None:intergenic 50.0%
GAGCCAGACAAGGATACAAG+TGG - Chr5:52996246-52996265 None:intergenic 50.0%
GAGGGGAGTCAAATCACTAG+TGG + Chr5:52994965-52994984 MsG0580027093.01.T01:intron 50.0%
GCATTTCCGGAAACTTGGGT+CGG + Chr5:52997801-52997820 MsG0580027093.01.T01:intron 50.0%
GCTAAAGTCTTGGCAGAAGC+CGG + Chr5:52996415-52996434 MsG0580027093.01.T01:intron 50.0%
GCTCCACTTGTATCCTTGTC+TGG + Chr5:52996240-52996259 MsG0580027093.01.T01:CDS 50.0%
GGATGCACAGGAGGTAACAT+TGG + Chr5:53000039-53000058 MsG0580027093.01.T01:three_prime_UTR 50.0%
GGCTACACGTATCCTATGGT+AGG + Chr5:52995841-52995860 MsG0580027093.01.T01:intron 50.0%
GGGTAGAAACTAGGCTTAGG+TGG + Chr5:52994885-52994904 MsG0580027093.01.T01:intron 50.0%
GGGTGGAATCAGCTGAAACA+GGG - Chr5:52995311-52995330 None:intergenic 50.0%
GGTAGGGCGAAGATGGAAAT+GGG + Chr5:52999835-52999854 MsG0580027093.01.T01:CDS 50.0%
GTAGAAAATGAGGGGTGGCA+TGG - Chr5:52993782-52993801 None:intergenic 50.0%
GTGTGATATGCTATCGGAGG+TGG - Chr5:52997595-52997614 None:intergenic 50.0%
TCAGCTCGCATCTGCATTTC+CGG + Chr5:52997788-52997807 MsG0580027093.01.T01:intron 50.0%
TGATCGAGACAAAGCTGTGG+TGG + Chr5:52993204-52993223 MsG0580027093.01.T01:CDS 50.0%
TGCCTGGAGGTCTATAAGTG+TGG + Chr5:52993592-52993611 MsG0580027093.01.T01:intron 50.0%
TGCTGTACGGGACAAAGTGT+TGG + Chr5:52994713-52994732 MsG0580027093.01.T01:intron 50.0%
TGGGTGGAATCAGCTGAAAC+AGG - Chr5:52995312-52995331 None:intergenic 50.0%
TGGTGATCGAGACAAAGCTG+TGG + Chr5:52993201-52993220 MsG0580027093.01.T01:CDS 50.0%
TGTGGAGAGGCTTTACCTTG+AGG + Chr5:52998537-52998556 MsG0580027093.01.T01:CDS 50.0%
TTAGGGGAGGGAACATGGAA+GGG + Chr5:52994344-52994363 MsG0580027093.01.T01:intron 50.0%
TTGGACATGTTGGCAGGAGA+TGG + Chr5:52996851-52996870 MsG0580027093.01.T01:CDS 50.0%
TTGTGTAACGGCTTCTTCGG+CGG - Chr5:52993257-52993276 None:intergenic 50.0%
TTTAGGGGAGGGAACATGGA+AGG + Chr5:52994343-52994362 MsG0580027093.01.T01:intron 50.0%
TTTCACTCCAACCACCACAC+CGG + Chr5:52993750-52993769 MsG0580027093.01.T01:intron 50.0%
TTTGTCTCGATCACCACGAG+TGG - Chr5:52993197-52993216 None:intergenic 50.0%
! ATCACGGTTCTGATGTGGAG+AGG + Chr5:52998524-52998543 MsG0580027093.01.T01:CDS 50.0%
! CCAAGCCTTTTCCCACTAAG+TGG - Chr5:52995125-52995144 None:intergenic 50.0%
! CTTTTCCCACTAAGTGGGGT+CGG - Chr5:52995119-52995138 None:intergenic 50.0%
! GCCGCTTGTGCTATTGTTGA+AGG - Chr5:52998337-52998356 None:intergenic 50.0%
! GCTGTACGGGACAAAGTGTT+GGG + Chr5:52994714-52994733 MsG0580027093.01.T01:intron 50.0%
! GTTTTCTAACTGGGCCAAGC+AGG + Chr5:52997929-52997948 MsG0580027093.01.T01:intron 50.0%
!! ATGGTGTCACTGAGCTACGT+GGG + Chr5:52999216-52999235 MsG0580027093.01.T01:intron 50.0%
!! GGAATCCGGGTTGAGTTTTC+AGG + Chr5:52997858-52997877 MsG0580027093.01.T01:intron 50.0%
!! GTGTGCAGTGGTTCTAGGAT+AGG - Chr5:52993812-52993831 None:intergenic 50.0%
!! TAATTTGCTGGGGACCACAC+CGG - Chr5:52996437-52996456 None:intergenic 50.0%
!! TTCAAATGGAGGAGTGCCTC+AGG + Chr5:52994618-52994637 MsG0580027093.01.T01:intron 50.0%
!! TTGAATCTGGTAATGGGGGC+TGG - Chr5:52993841-52993860 None:intergenic 50.0%
AGAGAGAAATCGGGCCTGCT+TGG - Chr5:52997946-52997965 None:intergenic 55.0%
AGATCTGAGCTGCTTAGCCG+AGG + Chr5:52998457-52998476 MsG0580027093.01.T01:CDS 55.0%
ATCCCATGTGCATCACCGCA+CGG - Chr5:52997728-52997747 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr5:52995110-52995129 MsG0580027093.01.T01:intron 55.0%
CAACCCCGTTGCAACGAATG+TGG + Chr5:52993158-52993177 MsG0580027093.01.T01:CDS 55.0%
CACATGGGATCGACAGTTGC+AGG + Chr5:52997738-52997757 MsG0580027093.01.T01:intron 55.0%
CAGAACTTGGGTGGAGGATG+AGG + Chr5:52999775-52999794 MsG0580027093.01.T01:intron 55.0%
CAGCATCACCAATGGACCCA+GGG - Chr5:52997647-52997666 None:intergenic 55.0%
CCTCAGCAAGAACAGCAGCA+CGG - Chr5:52999817-52999836 None:intergenic 55.0%
CGACCCCACTTAGTGGGAAA+AGG + Chr5:52995117-52995136 MsG0580027093.01.T01:intron 55.0%
CTAGGCCCACTTAGGTTAGC+GGG + Chr5:52993390-52993409 MsG0580027093.01.T01:intron 55.0%
CTCAGCAAGAACAGCAGCAC+GGG - Chr5:52999816-52999835 None:intergenic 55.0%
CTCAGGATGAGCTTCGACCT+TGG + Chr5:52999990-53000009 MsG0580027093.01.T01:three_prime_UTR 55.0%
CTCTTCTGTCTCAGCTTGCC+TGG - Chr5:52998434-52998453 None:intergenic 55.0%
CTGTCTATGCACTCTCTGCC+TGG + Chr5:52993576-52993595 MsG0580027093.01.T01:intron 55.0%
GAGGGAACATGGAAGGGGAA+TGG + Chr5:52994350-52994369 MsG0580027093.01.T01:intron 55.0%
GAGTCACTAACGTGAGTCCC+TGG - Chr5:52993701-52993720 None:intergenic 55.0%
GAGTGGTTAATGGGAGGGAG+AGG - Chr5:52997392-52997411 None:intergenic 55.0%
GCTAGGCCCACTTAGGTTAG+CGG + Chr5:52993389-52993408 MsG0580027093.01.T01:intron 55.0%
GCTGCTGTTCTTGCTGAGGT+AGG + Chr5:52999818-52999837 MsG0580027093.01.T01:CDS 55.0%
GCTGGATCAGCTCCTCACTT+GGG + Chr5:52997663-52997682 MsG0580027093.01.T01:intron 55.0%
GGGATAATCGACCAGGTACG+TGG + Chr5:52996671-52996690 MsG0580027093.01.T01:intron 55.0%
GGTAACATTGGGCCCAAGTG+AGG - Chr5:52997678-52997697 None:intergenic 55.0%
GTAAGACGGGCGATGCTGTA+CGG + Chr5:52994700-52994719 MsG0580027093.01.T01:intron 55.0%
TAAGACGGGCGATGCTGTAC+GGG + Chr5:52994701-52994720 MsG0580027093.01.T01:intron 55.0%
TAGGGGAGGGAACATGGAAG+GGG + Chr5:52994345-52994364 MsG0580027093.01.T01:intron 55.0%
TCGAGACAAAGCTGTGGTGG+AGG + Chr5:52993207-52993226 MsG0580027093.01.T01:CDS 55.0%
TCTATGCACTCTCTGCCTGG+AGG + Chr5:52993579-52993598 MsG0580027093.01.T01:intron 55.0%
TGCTCGTGTGCAGTGGTTCT+AGG - Chr5:52993817-52993836 None:intergenic 55.0%
TGCTGGATCAGCTCCTCACT+TGG + Chr5:52997662-52997681 MsG0580027093.01.T01:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr5:52995111-52995130 MsG0580027093.01.T01:intron 55.0%
TTACCACACCCTGGGTCCAT+TGG + Chr5:52997636-52997655 MsG0580027093.01.T01:intron 55.0%
TTGCTGAGGTAGGGCGAAGA+TGG + Chr5:52999828-52999847 MsG0580027093.01.T01:CDS 55.0%
TTTCGCTGCTAGGCCCACTT+AGG + Chr5:52993382-52993401 MsG0580027093.01.T01:intron 55.0%
! AGACAAAGCTGTGGTGGAGG+AGG + Chr5:52993210-52993229 MsG0580027093.01.T01:CDS 55.0%
! GTGTGCATTAGCTCTCTGCG+AGG - Chr5:52997101-52997120 None:intergenic 55.0%
! TGAGTTGGGCAGAACTTGGG+TGG + Chr5:52999766-52999785 MsG0580027093.01.T01:intron 55.0%
!! CATGGTGTCACTGAGCTACG+TGG + Chr5:52999215-52999234 MsG0580027093.01.T01:intron 55.0%
AGTCTTGGCAGAAGCCGGTG+TGG + Chr5:52996420-52996439 MsG0580027093.01.T01:intron 60.0%
CAAGAACAGCAGCACGGGCT+TGG - Chr5:52999811-52999830 None:intergenic 60.0%
CATGTGCATCACCGCACGGA+GGG - Chr5:52997724-52997743 None:intergenic 60.0%
CCAGCATCACCAATGGACCC+AGG - Chr5:52997648-52997667 None:intergenic 60.0%
CTCCGTGCGGTGATGCACAT+GGG + Chr5:52997723-52997742 MsG0580027093.01.T01:intron 60.0%
GCGAATCGCTCGTGTCTGTC+TGG + Chr5:52993533-52993552 MsG0580027093.01.T01:intron 60.0%
GGGCCTAGCAGCGAAACAAC+AGG - Chr5:52993378-52993397 None:intergenic 60.0%
GTCTCGATCACCACGAGTGG+TGG - Chr5:52993194-52993213 None:intergenic 60.0%
GTTGGGCAGAACTTGGGTGG+AGG + Chr5:52999769-52999788 MsG0580027093.01.T01:intron 60.0%
TCACCAATGGACCCAGGGTG+TGG - Chr5:52997642-52997661 None:intergenic 60.0%
TGTAACGGCTTCTTCGGCGG+TGG - Chr5:52993254-52993273 None:intergenic 60.0%
! CAAAGCTGTGGTGGAGGAGG+AGG + Chr5:52993213-52993232 MsG0580027093.01.T01:CDS 60.0%
! CCGTGCTGCTGTTCTTGCTG+AGG + Chr5:52999814-52999833 MsG0580027093.01.T01:CDS 60.0%
!! CCTGGGTCCATTGGTGATGC+TGG + Chr5:52997645-52997664 MsG0580027093.01.T01:intron 60.0%
!! CTGTGGCTCTGACAAGTGGC+AGG + Chr5:52998356-52998375 MsG0580027093.01.T01:CDS 60.0%
AGGGGTGGCATGGATGGGAC+CGG - Chr5:52993772-52993791 None:intergenic 65.0%
CATGGATGGGACCGGTGTGG+TGG - Chr5:52993764-52993783 None:intergenic 65.0%
CCATGTGCATCACCGCACGG+AGG - Chr5:52997725-52997744 None:intergenic 65.0%
CCTCCGTGCGGTGATGCACA+TGG + Chr5:52997722-52997741 MsG0580027093.01.T01:intron 65.0%
CGGAGGTGGCTGTGAGAGAC+AGG - Chr5:52997581-52997600 None:intergenic 65.0%
GATGGGACCGGTGTGGTGGT+TGG - Chr5:52993760-52993779 None:intergenic 65.0%
GGCTGGATGCTCGTGTGCAG+TGG - Chr5:52993824-52993843 None:intergenic 65.0%
TGGCATGGATGGGACCGGTG+TGG - Chr5:52993767-52993786 None:intergenic 65.0%
! AGCTGTGGTGGAGGAGGAGG+AGG + Chr5:52993216-52993235 MsG0580027093.01.T01:CDS 65.0%
!! GCGGCTGTGGCTCTGACAAG+TGG + Chr5:52998352-52998371 MsG0580027093.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 52993094 53000114 52993094 ID=MsG0580027093.01;Name=MsG0580027093.01
Chr5 mRNA 52993094 53000114 52993094 ID=MsG0580027093.01.T01;Parent=MsG0580027093.01;Name=MsG0580027093.01.T01;_AED=0.47;_eAED=0.49;_QI=0|0.85|0.75|1|0.85|0.87|8|243|438
Chr5 exon 52993094 52993280 52993094 ID=MsG0580027093.01.T01:exon:17405;Parent=MsG0580027093.01.T01
Chr5 exon 52995277 52995365 52995277 ID=MsG0580027093.01.T01:exon:17406;Parent=MsG0580027093.01.T01
Chr5 exon 52996026 52996114 52996026 ID=MsG0580027093.01.T01:exon:17407;Parent=MsG0580027093.01.T01
Chr5 exon 52996221 52996364 52996221 ID=MsG0580027093.01.T01:exon:17408;Parent=MsG0580027093.01.T01
Chr5 exon 52996610 52996685 52996610 ID=MsG0580027093.01.T01:exon:17409;Parent=MsG0580027093.01.T01
Chr5 exon 52996791 52996896 52996791 ID=MsG0580027093.01.T01:exon:17410;Parent=MsG0580027093.01.T01
Chr5 exon 52998305 52998836 52998305 ID=MsG0580027093.01.T01:exon:17411;Parent=MsG0580027093.01.T01
Chr5 exon 52999778 53000114 52999778 ID=MsG0580027093.01.T01:exon:17412;Parent=MsG0580027093.01.T01
Chr5 CDS 52993094 52993280 52993094 ID=MsG0580027093.01.T01:cds;Parent=MsG0580027093.01.T01
Chr5 CDS 52995277 52995365 52995277 ID=MsG0580027093.01.T01:cds;Parent=MsG0580027093.01.T01
Chr5 CDS 52996026 52996114 52996026 ID=MsG0580027093.01.T01:cds;Parent=MsG0580027093.01.T01
Chr5 CDS 52996221 52996364 52996221 ID=MsG0580027093.01.T01:cds;Parent=MsG0580027093.01.T01
Chr5 CDS 52996610 52996685 52996610 ID=MsG0580027093.01.T01:cds;Parent=MsG0580027093.01.T01
Chr5 CDS 52996791 52996896 52996791 ID=MsG0580027093.01.T01:cds;Parent=MsG0580027093.01.T01
Chr5 CDS 52998305 52998836 52998305 ID=MsG0580027093.01.T01:cds;Parent=MsG0580027093.01.T01
Chr5 CDS 52999778 52999871 52999778 ID=MsG0580027093.01.T01:cds;Parent=MsG0580027093.01.T01
Chr5 three_prime_UTR 52999872 53000114 52999872 ID=MsG0580027093.01.T01:three_prime_utr;Parent=MsG0580027093.01.T01
Gene Sequence

>MsG0580027093.01.T01

TTGTTGTTTTTGTTGTCAACACTCACTCAAATTCATGTGCGTTTAGGTTTTAATATTCAATTCACAACCCCGTTGCAACGAATGTGGACTACAATTACCACCACTCGTGGTGATCGAGACAAAGCTGTGGTGGAGGAGGAGGAGGAGTTTGATGAATCCACCGCCGAAGAAGCCGTTACACAAACTGAAACTACTGAAAAGCCGGCACGAGTTACAATCCCTGTTTCAGCTGATTCCACCCAAGAAGAAGCATTGTCAGTCTTAAAGAAGTTGAAGATAGTTGAAGATGATGTGGAAGCTAATGAATTATGTACCAGAAGACAATTTGCTAGATGGCTAATTAAATTAAATTCGTCGTTGGAAAGAAATCCAAAACACAGGATTGCTCCACTTGTATCCTTGTCTGGCTCTGTAGATAATGCATTTGACGATATCAGTGTTGATGACCCAGATTTTCAGTCTATTCAAGGTAATAAAAGTTATGGAATTTCACTCGAACCCAAAATCAAATTCATTTCACGACAAGATTTAATGGAATGGAGAACTCAGTTGGAGTATGGATTTTTCTTTGGGATAATCGACCAGGTATCAATCAAAAAAGCAGGTTATATGGATGTGAAAGAGATAACATCTCAGGGAGTTTATTTGGACATGTTGGCAGGAGATGGAAGTATACTCAGAAAAGTTTTTGGACAGAGTAAGCGCTTTCAGCCAAACAAACCTTCAACAATAGCACAAGCGGCTGTGGCTCTGACAAGTGGCAGGATGAAAGAAGCAATATCTGCTGAATTGTCAAGATTAGAAGCTGAGAATTCTGCCAGGCAAGCTGAGACAGAAGAGATTAGATCTGAGCTGCTTAGCCGAGGAGACATACAGAAGTTTTGGGATGCAAAGATTAGTGAAGAGAAAAATCACGGTTCTGATGTGGAGAGGCTTTACCTTGAGGCAGCAAACAATTTGGTCGAAGAGAAGATCAATCAAGAAAAAATAAACGCTGATTTTTTAAAAGAACAGGCAGCAATGGCTTGTCAGAAGCAGATGCTGCTTAGTTTGAAAGAAGAAGTTGATGAGATATCAGAAAAGCTTGCCTTAGAAAGAGTCATATATGTAGATGAAAAACAGACTGTACAGAAGTTACTCAGAGATTTAGAGTTCAAGCATGAAAAAATTCTTGACACCAAATCCACGCTAGAAGCTGAGAAAGAAGCTCTTCAGATGCTTAGAACTTGGGTGGAGGATGAGGCAAGAAGAAGCCAAGCCCGTGCTGCTGTTCTTGCTGAGGTAGGGCGAAGATGGAAATGGGATGACCAAGCTTGA
Protein sequence

>MsG0580027093.01.T01

LLFLLSTLTQIHVRLGFNIQFTTPLQRMWTTITTTRGDRDKAVVEEEEEFDESTAEEAVTQTETTEKPARVTIPVSADSTQEEALSVLKKLKIVEDDVEANELCTRRQFARWLIKLNSSLERNPKHRIAPLVSLSGSVDNAFDDISVDDPDFQSIQGNKSYGISLEPKIKFISRQDLMEWRTQLEYGFFFGIIDQVSIKKAGYMDVKEITSQGVYLDMLAGDGSILRKVFGQSKRFQPNKPSTIAQAAVALTSGRMKEAISAELSRLEAENSARQAETEEIRSELLSRGDIQKFWDAKISEEKNHGSDVERLYLEAANNLVEEKINQEKINADFLKEQAAMACQKQMLLSLKEEVDEISEKLALERVIYVDEKQTVQKLLRDLEFKHEKILDTKSTLEAEKEALQMLRTWVEDEARRSQARAAVLAEVGRRWKWDDQA*