AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027097.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027097.01.T01 MTR_5g053430 95.312 448 10 2 15 457 1 442 0.0 872
MsG0580027097.01.T01 MTR_5g053430 94.678 451 10 2 15 457 1 445 0.0 870
MsG0580027097.01.T01 MTR_1g093680 61.570 484 132 10 18 456 6 480 0.0 556
MsG0580027097.01.T01 MTR_1g093670 51.493 402 129 10 55 452 6 345 7.18e-122 359
MsG0580027097.01.T01 MTR_7g033320 53.017 232 79 4 20 239 5 218 5.92e-80 256
MsG0580027097.01.T01 MTR_2g014680 46.043 278 134 5 48 315 27 298 7.77e-74 234
MsG0580027097.01.T01 MTR_4g088245 56.863 204 79 3 50 250 44 241 4.25e-73 233
MsG0580027097.01.T01 MTR_8g102240 57.360 197 68 4 50 238 27 215 4.57e-70 230
MsG0580027097.01.T01 MTR_8g102240 57.360 197 68 4 50 238 27 215 4.68e-70 230
MsG0580027097.01.T01 MTR_8g069160 58.602 186 68 3 50 232 44 223 7.14e-70 223
MsG0580027097.01.T01 MTR_4g078875 53.695 203 83 3 46 243 19 215 6.70e-66 213
MsG0580027097.01.T01 MTR_2g090735 53.846 208 86 3 46 249 20 221 2.03e-61 202
MsG0580027097.01.T01 MTR_3g070030 32.292 192 103 8 60 244 7 178 1.87e-12 68.9
MsG0580027097.01.T01 MTR_1g008740 31.579 190 102 11 72 254 27 195 4.81e-11 64.7
MsG0580027097.01.T01 MTR_1g008740 31.579 190 102 11 72 254 13 181 4.88e-11 64.3
MsG0580027097.01.T01 MTR_7g085260 34.807 181 86 12 72 241 17 176 8.13e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027097.01.T01 AT1G25580 55.844 462 161 10 19 455 5 448 5.41e-171 488
MsG0580027097.01.T01 AT3G01600 54.386 228 91 5 19 244 4 220 2.98e-76 243
MsG0580027097.01.T01 AT5G14490 50.000 254 110 6 19 270 4 242 8.10e-75 236
MsG0580027097.01.T01 AT5G14490 50.000 254 110 6 19 270 4 242 9.28e-75 238
MsG0580027097.01.T01 AT5G14490 50.000 254 110 6 19 270 7 245 1.07e-74 238
MsG0580027097.01.T01 AT5G14490 50.000 254 110 6 19 270 7 245 2.39e-74 238
MsG0580027097.01.T01 AT4G29230 56.566 198 69 3 50 238 28 217 1.60e-71 233
MsG0580027097.01.T01 AT4G29230 56.566 198 69 3 50 238 28 217 7.37e-71 233
MsG0580027097.01.T01 AT4G29230 56.566 198 68 3 50 238 28 216 1.36e-70 232
MsG0580027097.01.T01 AT4G28500 50.216 231 103 5 19 243 2 226 2.54e-69 223
MsG0580027097.01.T01 AT1G28470 54.229 201 80 3 49 243 49 243 2.48e-68 221
MsG0580027097.01.T01 AT5G56620 53.234 201 75 5 50 238 22 215 7.89e-65 214
MsG0580027097.01.T01 AT5G56620 53.234 201 75 5 50 238 22 215 8.45e-65 214
MsG0580027097.01.T01 AT5G56620 53.234 201 75 5 50 238 22 215 1.50e-64 213
MsG0580027097.01.T01 AT3G18400 31.429 175 93 9 72 241 5 157 6.26e-14 72.8
MsG0580027097.01.T01 AT1G33280 31.250 176 101 9 71 244 7 164 1.31e-12 68.9
MsG0580027097.01.T01 AT1G01720 33.557 149 74 8 72 218 7 132 2.62e-11 64.7
MsG0580027097.01.T01 AT1G02230 27.461 193 118 7 73 262 4 177 3.72e-11 65.1
MsG0580027097.01.T01 AT4G10350 30.108 186 105 10 71 250 8 174 6.56e-11 63.9
MsG0580027097.01.T01 AT5G61430 30.047 213 120 8 72 278 16 205 8.20e-11 63.5

Find 106 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATAGTATGCTGACAATT+TGG 0.134743 5:-53031447 None:intergenic
AAAATACATGATCAGGATTT+TGG 0.158079 5:+53033121 MsG0580027097.01.T01:CDS
CTTCTTCCACAGAGCAATTA+AGG 0.224693 5:+53033069 MsG0580027097.01.T01:CDS
GGATCAAATTTGACACCTTT+TGG 0.259342 5:-53032798 None:intergenic
TGCTTCTTTGTTTGACAACT+TGG 0.279960 5:+53035008 MsG0580027097.01.T01:three_prime_UTR
TGAACCCCATTCAAGATTAC+TGG 0.283602 5:-53033178 None:intergenic
GAAAAGCTGAGAAAACTAAT+TGG 0.286732 5:+53033251 MsG0580027097.01.T01:CDS
CAAGATAGCTTTATAGCATT+TGG 0.294737 5:+53034865 MsG0580027097.01.T01:CDS
TTTGTGTTTATATAGGAATT+TGG 0.295109 5:+53034838 MsG0580027097.01.T01:intron
CATCTGATCAGGAGGTAATT+TGG 0.312766 5:+53032820 MsG0580027097.01.T01:CDS
CAATAGTATGCTGACAATTT+GGG 0.324090 5:-53031446 None:intergenic
CCAACAGCAGCAAGTCAAAC+TGG 0.324794 5:+53033348 MsG0580027097.01.T01:CDS
GGCTCGGGAGTCACAGATTT+GGG 0.327276 5:-53033439 None:intergenic
ACATTTGACTCTACATTTGA+AGG 0.342814 5:-53034711 None:intergenic
GACGTCCGCTGGCACAAAAC+TGG 0.344109 5:+53033145 MsG0580027097.01.T01:CDS
GAATACAGCCTTTCAGTATA+AGG 0.352096 5:-53033463 None:intergenic
GAAGCAACAGTTAGGTTTGC+CGG 0.355194 5:-53034991 None:intergenic
AACAAGGTAGTAAAGTAATA+TGG 0.369882 5:+53034892 MsG0580027097.01.T01:exon
TCTGTTGGATTCACAACAAC+TGG 0.369929 5:+53034524 MsG0580027097.01.T01:CDS
AGGCTCGGGAGTCACAGATT+TGG 0.370654 5:-53033440 None:intergenic
ATCTTGAATGGGGTTCAAAA+AGG 0.388213 5:+53033184 MsG0580027097.01.T01:CDS
ATTGTTGCTTCAATAGCTTC+AGG 0.390657 5:-53033394 None:intergenic
GCAATTAAGGCTTATAATAC+TGG 0.394443 5:+53033082 MsG0580027097.01.T01:CDS
CAAACAAAGAAGCAACAGTT+AGG 0.403441 5:-53034999 None:intergenic
CTGTATTCAGATGGAGATCT+AGG 0.406160 5:+53033478 MsG0580027097.01.T01:CDS
TTTCTATATGCAGACCATCT+TGG 0.411265 5:+53031325 MsG0580027097.01.T01:CDS
TTTGCTTGCTCTTCACAGTA+AGG 0.413709 5:-53034348 None:intergenic
ATATCCTTCTTCAGATGCTC+TGG 0.424976 5:-53034660 None:intergenic
TCATCTTTACCATCTCTAGT+AGG 0.429288 5:-53034591 None:intergenic
CTAAGCCAGTAATCTTGAAT+GGG 0.433717 5:+53033173 MsG0580027097.01.T01:CDS
GTCACAGATTTGGGAGTAAC+CGG 0.439295 5:-53033430 None:intergenic
CAAATTTGATCCATCTGATC+AGG 0.442832 5:+53032809 MsG0580027097.01.T01:CDS
CATAAATAGAAAGGCTTGGT+TGG 0.448580 5:-53034626 None:intergenic
CTCGTTATTGTTAAACTCTC+CGG 0.448592 5:+53034972 MsG0580027097.01.T01:three_prime_UTR
AGGAACAGAAGAGGATGAAA+AGG 0.451744 5:+53033294 MsG0580027097.01.T01:CDS
ACTAAGCCAGTAATCTTGAA+TGG 0.454048 5:+53033172 MsG0580027097.01.T01:CDS
GCAAGTCAAACTGGGTGATA+AGG 0.457369 5:+53033357 MsG0580027097.01.T01:CDS
TGCATCGGGAGCATGTGATC+TGG 0.461888 5:+53031386 MsG0580027097.01.T01:CDS
AAAAGCTGAGAAAACTAATT+GGG 0.463490 5:+53033252 MsG0580027097.01.T01:CDS
GGAGTTTCGACTAAGTCAAT+TGG 0.465851 5:+53034752 MsG0580027097.01.T01:CDS
ATTACTCTTGAAGTGAATGA+TGG 0.470794 5:+53032906 MsG0580027097.01.T01:CDS
CTGCTGTTGGTAAAACACTT+TGG 0.472718 5:-53033335 None:intergenic
TTCTTGTAACTATAAGTTGT+GGG 0.476043 5:+53034941 MsG0580027097.01.T01:three_prime_UTR
CTTTCTATTTATGCTCAGCT+AGG 0.482354 5:+53034636 MsG0580027097.01.T01:CDS
GCTTCTTTGTTTGACAACTT+GGG 0.482925 5:+53035009 MsG0580027097.01.T01:three_prime_UTR
TGAAGCAACAATCACTAAAG+TGG 0.486754 5:+53033405 MsG0580027097.01.T01:CDS
AACAATCACTAAAGTGGATC+CGG 0.490246 5:+53033411 MsG0580027097.01.T01:CDS
GAGTGGCCTGGCTTGCCAAA+AGG 0.491207 5:+53032783 MsG0580027097.01.T01:CDS
TTTCTTGTAACTATAAGTTG+TGG 0.492549 5:+53034940 MsG0580027097.01.T01:three_prime_UTR
ACTCATCCTCAAAACTTGCC+AGG 0.498733 5:+53032939 MsG0580027097.01.T01:CDS
TGCTTGAAGTGTTGCAGCAC+AGG 0.500329 5:-53035074 None:intergenic
CTGACAATTTGGGCAAGCCT+TGG 0.506059 5:-53031436 None:intergenic
GTTATGCATCAATATCATCT+AGG 0.507798 5:+53033274 MsG0580027097.01.T01:CDS
CCTTTCAGTATAAGGAGGCT+CGG 0.514348 5:-53033455 None:intergenic
CCAGTTTGACTTGCTGCTGT+TGG 0.516424 5:-53033348 None:intergenic
CTAGCTGAGCATAAATAGAA+AGG 0.516504 5:-53034635 None:intergenic
TATATGCAGACCATCTTGGC+TGG 0.517331 5:+53031329 MsG0580027097.01.T01:CDS
ATGTCAGGTGTTAAGCAAGA+TGG 0.522325 5:+53033034 MsG0580027097.01.T01:CDS
TTTGTAAGGTTGTAAAAGAG+TGG 0.526331 5:+53032766 MsG0580027097.01.T01:intron
ATTGAAAATAATGCTGATGA+TGG 0.526709 5:+53034471 MsG0580027097.01.T01:CDS
GTTCTGTATATGAGTAGTGC+AGG 0.531845 5:+53033223 MsG0580027097.01.T01:CDS
TTGCTTGCAAAATGTGGTGT+TGG 0.532555 5:+53032846 MsG0580027097.01.T01:CDS
CAATTTGGGCAAGCCTTGGT+AGG 0.534551 5:-53031432 None:intergenic
GTAGAAACTGAACATAATGA+AGG 0.537204 5:+53034387 MsG0580027097.01.T01:CDS
CTTTCAGTATAAGGAGGCTC+GGG 0.538356 5:-53033454 None:intergenic
TTTAAGGTTTACCTGAGGAA+TGG 0.539930 5:-53033515 None:intergenic
TAGTGAATCACAAAATCTGT+TGG 0.540122 5:+53034509 MsG0580027097.01.T01:CDS
AGACACACCCGCCATTCCTC+AGG 0.541756 5:+53033504 MsG0580027097.01.T01:CDS
ACTCTACATTTGAAGGCTCA+AGG 0.543494 5:-53034704 None:intergenic
AATGAAAATAATGCTGATGA+TGG 0.544523 5:+53034420 MsG0580027097.01.T01:CDS
TACCATCTCTAGTAGGAGAC+TGG 0.544929 5:-53034584 None:intergenic
AGGTTTACCTGAGGAATGGC+GGG 0.545471 5:-53033511 None:intergenic
TAAGCTTCGATGAAAATGTC+AGG 0.546426 5:+53033019 MsG0580027097.01.T01:intron
TAATTGCTCTGTGGAAGAAG+TGG 0.556020 5:-53033066 None:intergenic
CAAATTACCTCCTGATCAGA+TGG 0.556689 5:-53032819 None:intergenic
AACTCATCAACGAAAGGATG+AGG 0.560139 5:-53032879 None:intergenic
AGGACCAGAGCATCTGAAGA+AGG 0.560183 5:+53034656 MsG0580027097.01.T01:CDS
ACTGAAAGGCTGTATTCAGA+TGG 0.567450 5:+53033469 MsG0580027097.01.T01:CDS
TGAGCATAAATAGAAAGGCT+TGG 0.571858 5:-53034630 None:intergenic
TGTAGAGAATGACACACCTT+CGG 0.575337 5:+53034731 MsG0580027097.01.T01:CDS
AGCCAGTCTCCTACTAGAGA+TGG 0.577237 5:+53034582 MsG0580027097.01.T01:CDS
ATTATGTTCAGTTTCTACCA+TGG 0.577859 5:-53034382 None:intergenic
AAGGTTGTAAAAGAGTGGCC+TGG 0.581336 5:+53032771 MsG0580027097.01.T01:intron
AAGGTTTACCTGAGGAATGG+CGG 0.592996 5:-53033512 None:intergenic
CCGAGCCTCCTTATACTGAA+AGG 0.594207 5:+53033455 MsG0580027097.01.T01:CDS
AGCAAAAGATGATCTATCCA+TGG 0.596236 5:+53034365 MsG0580027097.01.T01:CDS
ATGCAGACCATCTTGGCTGG+TGG 0.599205 5:+53031332 MsG0580027097.01.T01:CDS
CAACAGCAGCAAGTCAAACT+GGG 0.602243 5:+53033349 MsG0580027097.01.T01:CDS
TATATGAGTAGTGCAGGAGG+AGG 0.609676 5:+53033229 MsG0580027097.01.T01:CDS
ATAATAAACTCATCAACGAA+AGG 0.610589 5:-53032885 None:intergenic
AGAAATCTGCATCTCAGATG+AGG 0.615799 5:-53034922 None:intergenic
TGGCACTTGCTTGCAAAATG+TGG 0.618127 5:+53032840 MsG0580027097.01.T01:CDS
TAGAAACTGAACATAATGAA+GGG 0.620128 5:+53034388 MsG0580027097.01.T01:CDS
GTGATCTGGAAAATGTTACA+TGG 0.621927 5:+53031400 MsG0580027097.01.T01:CDS
ACAGAAGAGGATGAAAAGGA+TGG 0.629598 5:+53033298 MsG0580027097.01.T01:CDS
ATTTGATCCATCTGATCAGG+AGG 0.636045 5:+53032812 MsG0580027097.01.T01:CDS
AATTGCTCTGTGGAAGAAGT+GGG 0.639626 5:-53033065 None:intergenic
ATATCATCTAGGAACAGAAG+AGG 0.646141 5:+53033285 MsG0580027097.01.T01:CDS
TACAGCCTTTCAGTATAAGG+AGG 0.653106 5:-53033460 None:intergenic
ATGGAAAAGCAATCCTACCA+AGG 0.655385 5:+53031419 MsG0580027097.01.T01:CDS
CTGTATATGAGTAGTGCAGG+AGG 0.660155 5:+53033226 MsG0580027097.01.T01:CDS
AGGCTTATAATACTGGCACT+CGG 0.668317 5:+53033089 MsG0580027097.01.T01:CDS
TATAAGCCTTAATTGCTCTG+TGG 0.669172 5:-53033075 None:intergenic
TAAGCCAGTAATCTTGAATG+GGG 0.669245 5:+53033174 MsG0580027097.01.T01:CDS
TGACTTAGTCGAAACTCCGA+AGG 0.670660 5:-53034747 None:intergenic
TATAGCATTTGGTTACAACA+AGG 0.688806 5:+53034876 MsG0580027097.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTGTTCAATATTTGTAA+AGG - Chr5:53032259-53032278 None:intergenic 15.0%
!! AATTGTTCAATATTTGTAAA+GGG - Chr5:53032258-53032277 None:intergenic 15.0%
!! ATGCTACATAAATAAAAAAA+GGG - Chr5:53032691-53032710 None:intergenic 15.0%
!! ATTATTAAAACCTAAACATT+TGG - Chr5:53033800-53033819 None:intergenic 15.0%
!! TATGCTACATAAATAAAAAA+AGG - Chr5:53032692-53032711 None:intergenic 15.0%
!!! TATTTGATAACAAGAAAATA+TGG - Chr5:53033542-53033561 None:intergenic 15.0%
!!! TTTAAAATCTAAATACTTAG+TGG - Chr5:53033760-53033779 None:intergenic 15.0%
!!! TTTTTCCTGATTATATTTTA+GGG + Chr5:53031513-53031532 MsG0580027097.01.T01:intron 15.0%
!! AAACAAGTGTATAAGAAAAT+GGG + Chr5:53031914-53031933 MsG0580027097.01.T01:intron 20.0%
!! ACATTTGTGTTTATTAATCA+AGG + Chr5:53034135-53034154 MsG0580027097.01.T01:intron 20.0%
!! TGAAGGAACATTATTATATA+GGG - Chr5:53032037-53032056 None:intergenic 20.0%
!! TTTGTGTTTATATAGGAATT+TGG + Chr5:53034838-53034857 MsG0580027097.01.T01:intron 20.0%
!!! AACAAGAAAATATGGTTTTA+AGG - Chr5:53033534-53033553 None:intergenic 20.0%
!!! CAAGCATATTATCTTTTTTT+TGG + Chr5:53035091-53035110 MsG0580027097.01.T01:three_prime_UTR 20.0%
!!! CTTTTTCCTGATTATATTTT+AGG + Chr5:53031512-53031531 MsG0580027097.01.T01:intron 20.0%
!!! GTATTATTTTACTCTTAACA+TGG + Chr5:53032007-53032026 MsG0580027097.01.T01:intron 20.0%
! AAAAGCTGAGAAAACTAATT+GGG + Chr5:53033252-53033271 MsG0580027097.01.T01:CDS 25.0%
! AAAAGGCTGTAAAAAGATTA+TGG + Chr5:53033201-53033220 MsG0580027097.01.T01:CDS 25.0%
! AACAAGGTAGTAAAGTAATA+TGG + Chr5:53034892-53034911 MsG0580027097.01.T01:exon 25.0%
! AACAAGTGTATAAGAAAATG+GGG + Chr5:53031915-53031934 MsG0580027097.01.T01:intron 25.0%
! AAGAAACATTACTTCTGATA+TGG - Chr5:53031871-53031890 None:intergenic 25.0%
! AATCCATTGTAAGTTAGTTA+AGG + Chr5:53031591-53031610 MsG0580027097.01.T01:intron 25.0%
! AATCTAAATACTTAGTGGTT+TGG - Chr5:53033755-53033774 None:intergenic 25.0%
! AATGAAAATAATGCTGATGA+TGG + Chr5:53034420-53034439 MsG0580027097.01.T01:CDS 25.0%
! ACTATTATTGAACGAATAGA+AGG - Chr5:53031750-53031769 None:intergenic 25.0%
! ATAAAAACTCATTGAGAACA+TGG - Chr5:53034783-53034802 None:intergenic 25.0%
! ATAATAAACTCATCAACGAA+AGG - Chr5:53032888-53032907 None:intergenic 25.0%
! ATAGAACACAAAAATAGATC+AGG - Chr5:53034281-53034300 None:intergenic 25.0%
! ATCCATTGTAAGTTAGTTAA+GGG + Chr5:53031592-53031611 MsG0580027097.01.T01:intron 25.0%
! ATCTAATCCATTAATTCTGT+TGG + Chr5:53031789-53031808 MsG0580027097.01.T01:intron 25.0%
! ATCTATCAAGTACTAAACTA+TGG - Chr5:53031571-53031590 None:intergenic 25.0%
! ATGTACCCTAAAATATAATC+AGG - Chr5:53031521-53031540 None:intergenic 25.0%
! ATTGAAAATAATGCTGATGA+TGG + Chr5:53034471-53034490 MsG0580027097.01.T01:CDS 25.0%
! CTTAAAAACTCTAACTAAAC+AGG - Chr5:53032350-53032369 None:intergenic 25.0%
! GAAACAAGTGTATAAGAAAA+TGG + Chr5:53031913-53031932 MsG0580027097.01.T01:intron 25.0%
! GGATCAAAATAATCTTAAAC+TGG + Chr5:53031822-53031841 MsG0580027097.01.T01:intron 25.0%
! GTGAAGGAACATTATTATAT+AGG - Chr5:53032038-53032057 None:intergenic 25.0%
! TAAAAACTCATTGAGAACAT+GGG - Chr5:53034782-53034801 None:intergenic 25.0%
! TAAACTCCATTCCTATTTAT+AGG - Chr5:53031656-53031675 None:intergenic 25.0%
! TAAAGCATATGCCTATAAAT+AGG + Chr5:53031642-53031661 MsG0580027097.01.T01:intron 25.0%
! TAGAAACTGAACATAATGAA+GGG + Chr5:53034388-53034407 MsG0580027097.01.T01:CDS 25.0%
! TTCTTGTAACTATAAGTTGT+GGG + Chr5:53034941-53034960 MsG0580027097.01.T01:three_prime_UTR 25.0%
! TTTCTTGTAACTATAAGTTG+TGG + Chr5:53034940-53034959 MsG0580027097.01.T01:three_prime_UTR 25.0%
!! AAAATACATGATCAGGATTT+TGG + Chr5:53033121-53033140 MsG0580027097.01.T01:CDS 25.0%
!! AACCAAAATAAAAAGTGCAT+CGG + Chr5:53031371-53031390 MsG0580027097.01.T01:CDS 25.0%
!! AATCCTGATCATGTATTTTT+CGG - Chr5:53033120-53033139 None:intergenic 25.0%
!! ACGCATTTTTGTGTTTATAT+AGG + Chr5:53034831-53034850 MsG0580027097.01.T01:intron 25.0%
!! TTACTTGACTGTAATTTTGA+CGG + Chr5:53032573-53032592 MsG0580027097.01.T01:intron 25.0%
!!! AACACTTCAAGCATTTTTTT+TGG + Chr5:53035148-53035167 MsG0580027097.01.T01:three_prime_UTR 25.0%
!!! CGCTGTTATCTTTTTAATTT+AGG + Chr5:53032317-53032336 MsG0580027097.01.T01:intron 25.0%
!!! TATTTTAGGGTACATTGTTA+TGG + Chr5:53031526-53031545 MsG0580027097.01.T01:intron 25.0%
AAATGGTCTATCATTAGACT+TGG + Chr5:53032411-53032430 MsG0580027097.01.T01:intron 30.0%
AACCTAAACATTTGGTTGTT+TGG - Chr5:53033792-53033811 None:intergenic 30.0%
AATTCTGTTGGAAAAGGATA+GGG + Chr5:53031801-53031820 MsG0580027097.01.T01:intron 30.0%
ACAAGTGTATAAGAAAATGG+GGG + Chr5:53031916-53031935 MsG0580027097.01.T01:intron 30.0%
ACATTTGACTCTACATTTGA+AGG - Chr5:53034714-53034733 None:intergenic 30.0%
AGGAACTAAAATATACAGCA+AGG - Chr5:53032603-53032622 None:intergenic 30.0%
AGGAATGGAGTTTATATTGA+GGG + Chr5:53031662-53031681 MsG0580027097.01.T01:intron 30.0%
AGTTAGTTAAGGGGTTATAT+AGG + Chr5:53031602-53031621 MsG0580027097.01.T01:intron 30.0%
ATTACTCTTGAAGTGAATGA+TGG + Chr5:53032906-53032925 MsG0580027097.01.T01:CDS 30.0%
ATTATGTTCAGTTTCTACCA+TGG - Chr5:53034385-53034404 None:intergenic 30.0%
CAATAGTATGCTGACAATTT+GGG - Chr5:53031449-53031468 None:intergenic 30.0%
CAATATGTTGTTACATCAGT+TGG + Chr5:53032507-53032526 MsG0580027097.01.T01:intron 30.0%
CATATGCCTATAAATAGGAA+TGG + Chr5:53031647-53031666 MsG0580027097.01.T01:intron 30.0%
CTGTCTTAAATGATGTCTAA+AGG - Chr5:53033826-53033845 None:intergenic 30.0%
GAAAAGCTGAGAAAACTAAT+TGG + Chr5:53033251-53033270 MsG0580027097.01.T01:CDS 30.0%
GACTATTAAAGCCATATTTC+TGG - Chr5:53034070-53034089 None:intergenic 30.0%
GCAATTAAGGCTTATAATAC+TGG + Chr5:53033082-53033101 MsG0580027097.01.T01:CDS 30.0%
GCAATTGATGAGATTAGAAT+CGG + Chr5:53031688-53031707 MsG0580027097.01.T01:intron 30.0%
GTAGAAACTGAACATAATGA+AGG + Chr5:53034387-53034406 MsG0580027097.01.T01:CDS 30.0%
GTTATGCATCAATATCATCT+AGG + Chr5:53033274-53033293 MsG0580027097.01.T01:CDS 30.0%
TAATAATGTTCCTTCACTTC+TGG + Chr5:53032041-53032060 MsG0580027097.01.T01:intron 30.0%
TAATTCTGTTGGAAAAGGAT+AGG + Chr5:53031800-53031819 MsG0580027097.01.T01:intron 30.0%
TAGGAATGGAGTTTATATTG+AGG + Chr5:53031661-53031680 MsG0580027097.01.T01:intron 30.0%
TAGTGAATCACAAAATCTGT+TGG + Chr5:53034509-53034528 MsG0580027097.01.T01:CDS 30.0%
TATAGCATTTGGTTACAACA+AGG + Chr5:53034876-53034895 MsG0580027097.01.T01:CDS 30.0%
TCAATAGTATGCTGACAATT+TGG - Chr5:53031450-53031469 None:intergenic 30.0%
TCCATTAATTCTGTTGGAAA+AGG + Chr5:53031795-53031814 MsG0580027097.01.T01:intron 30.0%
TCCATTGTAAGTTAGTTAAG+GGG + Chr5:53031593-53031612 MsG0580027097.01.T01:intron 30.0%
TTAGTTCCTACAAATGTCAT+GGG + Chr5:53032614-53032633 MsG0580027097.01.T01:intron 30.0%
TTATGAGATCGTTTGAGAAA+AGG + Chr5:53032448-53032467 MsG0580027097.01.T01:intron 30.0%
TTTGTAAGGTTGTAAAAGAG+TGG + Chr5:53032766-53032785 MsG0580027097.01.T01:intron 30.0%
! ACCAAAATAAAAAGTGCATC+GGG + Chr5:53031372-53031391 MsG0580027097.01.T01:CDS 30.0%
! CTTTAGACATCATTTAAGAC+AGG + Chr5:53033824-53033843 MsG0580027097.01.T01:intron 30.0%
! TCCTTTTCCAACAGAATTAA+TGG - Chr5:53031799-53031818 None:intergenic 30.0%
! TTTAGTTCCTACAAATGTCA+TGG + Chr5:53032613-53032632 MsG0580027097.01.T01:intron 30.0%
!! CAAGATAGCTTTATAGCATT+TGG + Chr5:53034865-53034884 MsG0580027097.01.T01:CDS 30.0%
!! CTAACTTTGGATTTGCTATA+AGG + Chr5:53034186-53034205 MsG0580027097.01.T01:intron 30.0%
!! GTTTTTAAGCGTGTATTAGA+TGG + Chr5:53032361-53032380 MsG0580027097.01.T01:intron 30.0%
!! TATTAAAGCCATATTTCTGG+AGG - Chr5:53034067-53034086 None:intergenic 30.0%
!! TCATTTAAGACAGGTTTTGA+TGG + Chr5:53033833-53033852 MsG0580027097.01.T01:intron 30.0%
!!! TTTTTTCCCATGACATTTGT+AGG - Chr5:53032623-53032642 None:intergenic 30.0%
AAAGTCAGAAATTAGAGACC+CGG + Chr5:53031974-53031993 MsG0580027097.01.T01:intron 35.0%
AAATAATACCCCATTGCTTC+CGG - Chr5:53031996-53032015 None:intergenic 35.0%
AACAATCACTAAAGTGGATC+CGG + Chr5:53033411-53033430 MsG0580027097.01.T01:CDS 35.0%
AATATTTGTAAAGGGCCACA+TGG - Chr5:53032250-53032269 None:intergenic 35.0%
ACCCCTTAACTAACTTACAA+TGG - Chr5:53031597-53031616 None:intergenic 35.0%
ACTAAGCCAGTAATCTTGAA+TGG + Chr5:53033172-53033191 MsG0580027097.01.T01:CDS 35.0%
AGCAAAAGATGATCTATCCA+TGG + Chr5:53034365-53034384 MsG0580027097.01.T01:CDS 35.0%
AGCACTCTTAAAGCCATTAA+GGG - Chr5:53034094-53034113 None:intergenic 35.0%
AGGGTACATTGTTATGGAAT+GGG + Chr5:53031532-53031551 MsG0580027097.01.T01:intron 35.0%
AGTTCATGGCAAGTCATAAT+AGG - Chr5:53033578-53033597 None:intergenic 35.0%
ATAGACCATTTGAATCCAGA+TGG - Chr5:53032402-53032421 None:intergenic 35.0%
ATATCATCTAGGAACAGAAG+AGG + Chr5:53033285-53033304 MsG0580027097.01.T01:CDS 35.0%
ATATTGCAGGCTAAATAGGT+GGG - Chr5:53032493-53032512 None:intergenic 35.0%
ATCTTGAATGGGGTTCAAAA+AGG + Chr5:53033184-53033203 MsG0580027097.01.T01:CDS 35.0%
ATGGAGTTTATATTGAGGGT+AGG + Chr5:53031666-53031685 MsG0580027097.01.T01:intron 35.0%
ATGGTCAAAAATGGTGTGAA+GGG + Chr5:53034439-53034458 MsG0580027097.01.T01:CDS 35.0%
CAAACAAAGAAGCAACAGTT+AGG - Chr5:53035002-53035021 None:intergenic 35.0%
CAAATTTGATCCATCTGATC+AGG + Chr5:53032809-53032828 MsG0580027097.01.T01:CDS 35.0%
CAACATATTGCAGGCTAAAT+AGG - Chr5:53032497-53032516 None:intergenic 35.0%
CTAAACATTTGGTTGTTTGG+CGG - Chr5:53033789-53033808 None:intergenic 35.0%
CTAAGCCAGTAATCTTGAAT+GGG + Chr5:53033173-53033192 MsG0580027097.01.T01:CDS 35.0%
CTAGCTGAGCATAAATAGAA+AGG - Chr5:53034638-53034657 None:intergenic 35.0%
CTCGTTATTGTTAAACTCTC+CGG + Chr5:53034972-53034991 MsG0580027097.01.T01:three_prime_UTR 35.0%
CTGATGTAACAACATATTGC+AGG - Chr5:53032506-53032525 None:intergenic 35.0%
CTTTCTATTTATGCTCAGCT+AGG + Chr5:53034636-53034655 MsG0580027097.01.T01:CDS 35.0%
GAATACAGCCTTTCAGTATA+AGG - Chr5:53033466-53033485 None:intergenic 35.0%
GATCTCATAATGTCCTATGA+TGG - Chr5:53032438-53032457 None:intergenic 35.0%
GATTAGAATCGGAATAGTCT+TGG + Chr5:53031699-53031718 MsG0580027097.01.T01:intron 35.0%
GCTTTAATAGTCTCCCTTAA+TGG + Chr5:53034078-53034097 MsG0580027097.01.T01:intron 35.0%
GTGATCTGGAAAATGTTACA+TGG + Chr5:53031400-53031419 MsG0580027097.01.T01:CDS 35.0%
TAAGCCAGTAATCTTGAATG+GGG + Chr5:53033174-53033193 MsG0580027097.01.T01:CDS 35.0%
TAAGCTTCGATGAAAATGTC+AGG + Chr5:53033019-53033038 MsG0580027097.01.T01:intron 35.0%
TAAGGGGTTATATAGGTAGT+TGG + Chr5:53031609-53031628 MsG0580027097.01.T01:intron 35.0%
TAGCACTCTTAAAGCCATTA+AGG - Chr5:53034095-53034114 None:intergenic 35.0%
TAGGGTACATTGTTATGGAA+TGG + Chr5:53031531-53031550 MsG0580027097.01.T01:intron 35.0%
TATAAGCCTTAATTGCTCTG+TGG - Chr5:53033078-53033097 None:intergenic 35.0%
TCAAACCATCTGGATTCAAA+TGG + Chr5:53032394-53032413 MsG0580027097.01.T01:intron 35.0%
TCATCTTTACCATCTCTAGT+AGG - Chr5:53034594-53034613 None:intergenic 35.0%
TGAAGCAACAATCACTAAAG+TGG + Chr5:53033405-53033424 MsG0580027097.01.T01:CDS 35.0%
TGAGCATAAATAGAAAGGCT+TGG - Chr5:53034633-53034652 None:intergenic 35.0%
TTGTTACATCAGTTGGAGTT+TGG + Chr5:53032514-53032533 MsG0580027097.01.T01:intron 35.0%
TTTAAGCGTGTATTAGATGG+AGG + Chr5:53032364-53032383 MsG0580027097.01.T01:intron 35.0%
TTTCACATCCTCCAGAAATA+TGG + Chr5:53034056-53034075 MsG0580027097.01.T01:intron 35.0%
TTTCTATATGCAGACCATCT+TGG + Chr5:53031325-53031344 MsG0580027097.01.T01:CDS 35.0%
! ACAAAACCTTTTCTCACAAG+TGG - Chr5:53033871-53033890 None:intergenic 35.0%
! ACAACTTGGGCTGTAATTTT+TGG + Chr5:53035022-53035041 MsG0580027097.01.T01:three_prime_UTR 35.0%
! ATTCACTATCCCACCATTTT+TGG - Chr5:53034497-53034516 None:intergenic 35.0%
! ATTGTTGCTTCAATAGCTTC+AGG - Chr5:53033397-53033416 None:intergenic 35.0%
! CAAAACCTTTTCTCACAAGT+GGG - Chr5:53033870-53033889 None:intergenic 35.0%
! CATAAATAGAAAGGCTTGGT+TGG - Chr5:53034629-53034648 None:intergenic 35.0%
! GCTTCTTTGTTTGACAACTT+GGG + Chr5:53035009-53035028 MsG0580027097.01.T01:three_prime_UTR 35.0%
! GGATCAAATTTGACACCTTT+TGG - Chr5:53032801-53032820 None:intergenic 35.0%
! TGCTTCTTTGTTTGACAACT+TGG + Chr5:53035008-53035027 MsG0580027097.01.T01:three_prime_UTR 35.0%
! TTTAAGGTTTACCTGAGGAA+TGG - Chr5:53033518-53033537 None:intergenic 35.0%
!! ATGCTGATGATGGTCAAAAA+TGG + Chr5:53034430-53034449 MsG0580027097.01.T01:CDS 35.0%
!! TCCCGATGCACTTTTTATTT+TGG - Chr5:53031376-53031395 None:intergenic 35.0%
!! TTGACATTTAGCTTGTGAGT+TGG - Chr5:53032543-53032562 None:intergenic 35.0%
!!! ATGGTTTTAAGGTTTACCTG+AGG - Chr5:53033523-53033542 None:intergenic 35.0%
AACTCATCAACGAAAGGATG+AGG - Chr5:53032882-53032901 None:intergenic 40.0%
AATAATACCCCATTGCTTCC+GGG - Chr5:53031995-53032014 None:intergenic 40.0%
AATTGCTCTGTGGAAGAAGT+GGG - Chr5:53033068-53033087 None:intergenic 40.0%
ACACTACACACTAGAGTTCA+TGG - Chr5:53033592-53033611 None:intergenic 40.0%
ACAGAAGAGGATGAAAAGGA+TGG + Chr5:53033298-53033317 MsG0580027097.01.T01:CDS 40.0%
ACTCTACATTTGAAGGCTCA+AGG - Chr5:53034707-53034726 None:intergenic 40.0%
ACTGAAAGGCTGTATTCAGA+TGG + Chr5:53033469-53033488 MsG0580027097.01.T01:CDS 40.0%
AGAAATCTGCATCTCAGATG+AGG - Chr5:53034925-53034944 None:intergenic 40.0%
AGGAACAGAAGAGGATGAAA+AGG + Chr5:53033294-53033313 MsG0580027097.01.T01:CDS 40.0%
AGGCTTATAATACTGGCACT+CGG + Chr5:53033089-53033108 MsG0580027097.01.T01:CDS 40.0%
ATAGAAGGACAAACATCCCA+AGG - Chr5:53031735-53031754 None:intergenic 40.0%
ATATCCTTCTTCAGATGCTC+TGG - Chr5:53034663-53034682 None:intergenic 40.0%
ATGACAGGTCTAACACATTG+TGG - Chr5:53032209-53032228 None:intergenic 40.0%
ATGGAAAAGCAATCCTACCA+AGG + Chr5:53031419-53031438 MsG0580027097.01.T01:CDS 40.0%
ATGTCAGGTGTTAAGCAAGA+TGG + Chr5:53033034-53033053 MsG0580027097.01.T01:CDS 40.0%
ATTTGATCCATCTGATCAGG+AGG + Chr5:53032812-53032831 MsG0580027097.01.T01:CDS 40.0%
CAAATTACCTCCTGATCAGA+TGG - Chr5:53032822-53032841 None:intergenic 40.0%
CAGCACAACAATGATACTAG+AGG - Chr5:53034010-53034029 None:intergenic 40.0%
CATATTGCAGGCTAAATAGG+TGG - Chr5:53032494-53032513 None:intergenic 40.0%
CATCTGATCAGGAGGTAATT+TGG + Chr5:53032820-53032839 MsG0580027097.01.T01:CDS 40.0%
CGCCAAACAACCAAATGTTT+AGG + Chr5:53033787-53033806 MsG0580027097.01.T01:intron 40.0%
CTCTAGTATCATTGTTGTGC+TGG + Chr5:53034008-53034027 MsG0580027097.01.T01:intron 40.0%
CTGTATTCAGATGGAGATCT+AGG + Chr5:53033478-53033497 MsG0580027097.01.T01:CDS 40.0%
CTTAGTCTACAAATCCCAGT+AGG - Chr5:53032129-53032148 None:intergenic 40.0%
CTTCTTCCACAGAGCAATTA+AGG + Chr5:53033069-53033088 MsG0580027097.01.T01:CDS 40.0%
CTTGGCTACACTTCTAACTT+TGG + Chr5:53034173-53034192 MsG0580027097.01.T01:intron 40.0%
GAACAAGATCATGAACTCGT+TGG + Chr5:53032160-53032179 MsG0580027097.01.T01:intron 40.0%
GAGTACTCAGCAGTAGAAAT+AGG + Chr5:53033648-53033667 MsG0580027097.01.T01:intron 40.0%
GATGGTCAAAAATGGTGTGA+AGG + Chr5:53034438-53034457 MsG0580027097.01.T01:CDS 40.0%
GGAGTTTCGACTAAGTCAAT+TGG + Chr5:53034752-53034771 MsG0580027097.01.T01:CDS 40.0%
GTGTATTAGATGGAGGATAG+AGG + Chr5:53032371-53032390 MsG0580027097.01.T01:intron 40.0%
GTGTTAGACCTGTCATAGTA+GGG + Chr5:53032213-53032232 MsG0580027097.01.T01:intron 40.0%
GTTCTCATATTGTGCCTACT+GGG + Chr5:53032112-53032131 MsG0580027097.01.T01:intron 40.0%
GTTCTGTATATGAGTAGTGC+AGG + Chr5:53033223-53033242 MsG0580027097.01.T01:CDS 40.0%
TAATTGCTCTGTGGAAGAAG+TGG - Chr5:53033069-53033088 None:intergenic 40.0%
TACAGCCTTTCAGTATAAGG+AGG - Chr5:53033463-53033482 None:intergenic 40.0%
TAGAAGGACAAACATCCCAA+GGG - Chr5:53031734-53031753 None:intergenic 40.0%
TATTGCAGGCTAAATAGGTG+GGG - Chr5:53032492-53032511 None:intergenic 40.0%
TCTGTTGGATTCACAACAAC+TGG + Chr5:53034524-53034543 MsG0580027097.01.T01:CDS 40.0%
TGAACCCCATTCAAGATTAC+TGG - Chr5:53033181-53033200 None:intergenic 40.0%
TGACAGGTCTAACACATTGT+GGG - Chr5:53032208-53032227 None:intergenic 40.0%
TGTAGAGAATGACACACCTT+CGG + Chr5:53034731-53034750 MsG0580027097.01.T01:CDS 40.0%
TGTGTTAGACCTGTCATAGT+AGG + Chr5:53032212-53032231 MsG0580027097.01.T01:intron 40.0%
TGTTAGACCTGTCATAGTAG+GGG + Chr5:53032214-53032233 MsG0580027097.01.T01:intron 40.0%
TGTTTCTTCACCAGAAGTGA+AGG - Chr5:53032054-53032073 None:intergenic 40.0%
TTAAGCCCACTTGTGAGAAA+AGG + Chr5:53033862-53033881 MsG0580027097.01.T01:intron 40.0%
TTCTAAACCCACTTTCATGC+CGG - Chr5:53031955-53031974 None:intergenic 40.0%
TTGCTTGCAAAATGTGGTGT+TGG + Chr5:53032846-53032865 MsG0580027097.01.T01:CDS 40.0%
TTTGCTTGCTCTTCACAGTA+AGG - Chr5:53034351-53034370 None:intergenic 40.0%
! AACTCGTTGGTTGTAGTTAC+TGG + Chr5:53032173-53032192 MsG0580027097.01.T01:intron 40.0%
! AAGTTAGAAGTGTAGCCAAG+TGG - Chr5:53034173-53034192 None:intergenic 40.0%
! CATTAGACTTGGTCCATCAT+AGG + Chr5:53032422-53032441 MsG0580027097.01.T01:intron 40.0%
! CTGCTGTTGGTAAAACACTT+TGG - Chr5:53033338-53033357 None:intergenic 40.0%
! GTTTCAACCGCTCAAGTTTT+TGG + Chr5:53035197-53035216 MsG0580027097.01.T01:three_prime_UTR 40.0%
!! ATGCTGATGATGGCCAAAAA+TGG + Chr5:53034481-53034500 MsG0580027097.01.T01:CDS 40.0%
!! TGATGATGGCCAAAAATGGT+GGG + Chr5:53034485-53034504 MsG0580027097.01.T01:CDS 40.0%
AAGGTTGTAAAAGAGTGGCC+TGG + Chr5:53032771-53032790 MsG0580027097.01.T01:intron 45.0%
AAGGTTTACCTGAGGAATGG+CGG - Chr5:53033515-53033534 None:intergenic 45.0%
AATTAGAGACCCGGAAGCAA+TGG + Chr5:53031983-53032002 MsG0580027097.01.T01:intron 45.0%
ACCTCTAGCTGCCTTAATTG+CGG + Chr5:53033959-53033978 MsG0580027097.01.T01:intron 45.0%
ACTCATCCTCAAAACTTGCC+AGG + Chr5:53032939-53032958 MsG0580027097.01.T01:CDS 45.0%
AGAGTACGTACATGCTAGGA+GGG - Chr5:53033911-53033930 None:intergenic 45.0%
AGGATAGAGGTCAAACCATC+TGG + Chr5:53032384-53032403 MsG0580027097.01.T01:intron 45.0%
ATCCTCAAAACTTGCCAGGT+TGG + Chr5:53032943-53032962 MsG0580027097.01.T01:intron 45.0%
ATTAGAGACCCGGAAGCAAT+GGG + Chr5:53031984-53032003 MsG0580027097.01.T01:intron 45.0%
CAACAGAGTACGTACATGCT+AGG - Chr5:53033915-53033934 None:intergenic 45.0%
CAACAGCAGCAAGTCAAACT+GGG + Chr5:53033349-53033368 MsG0580027097.01.T01:CDS 45.0%
CAATTCATCTGAGGAGGCTT+CGG - Chr5:53034312-53034331 None:intergenic 45.0%
CATTCAACCGGCATGAAAGT+GGG + Chr5:53031945-53031964 MsG0580027097.01.T01:intron 45.0%
CCTTTCAGTATAAGGAGGCT+CGG - Chr5:53033458-53033477 None:intergenic 45.0%
CGTTCTCATATTGTGCCTAC+TGG + Chr5:53032111-53032130 MsG0580027097.01.T01:intron 45.0%
CTAGCATGTACGTACTCTGT+TGG + Chr5:53033913-53033932 MsG0580027097.01.T01:intron 45.0%
CTGTATATGAGTAGTGCAGG+AGG + Chr5:53033226-53033245 MsG0580027097.01.T01:CDS 45.0%
CTTTCAGTATAAGGAGGCTC+GGG - Chr5:53033457-53033476 None:intergenic 45.0%
GAAGCAACAGTTAGGTTTGC+CGG - Chr5:53034994-53035013 None:intergenic 45.0%
GCAAGTCAAACTGGGTGATA+AGG + Chr5:53033357-53033376 MsG0580027097.01.T01:CDS 45.0%
GCGCCGAAAAATACATGATC+AGG + Chr5:53033114-53033133 MsG0580027097.01.T01:CDS 45.0%
GCTCAAAGATGCCGCAATTA+AGG - Chr5:53033973-53033992 None:intergenic 45.0%
GGTGAAGAAACACGCATGAA+TGG + Chr5:53032062-53032081 MsG0580027097.01.T01:intron 45.0%
GTCACAGATTTGGGAGTAAC+CGG - Chr5:53033433-53033452 None:intergenic 45.0%
GTTAGACCTGTCATAGTAGG+GGG + Chr5:53032215-53032234 MsG0580027097.01.T01:intron 45.0%
TACCATCTCTAGTAGGAGAC+TGG - Chr5:53034587-53034606 None:intergenic 45.0%
TATATGAGTAGTGCAGGAGG+AGG + Chr5:53033229-53033248 MsG0580027097.01.T01:CDS 45.0%
TATATGCAGACCATCTTGGC+TGG + Chr5:53031329-53031348 MsG0580027097.01.T01:CDS 45.0%
TCAAAACCCCCTACTATGAC+AGG - Chr5:53032224-53032243 None:intergenic 45.0%
TCATTCAACCGGCATGAAAG+TGG + Chr5:53031944-53031963 MsG0580027097.01.T01:intron 45.0%
TCCAGACAATTCATCTGAGG+AGG - Chr5:53034318-53034337 None:intergenic 45.0%
TCCTCAGATGAATTGTCTGG+AGG + Chr5:53034317-53034336 MsG0580027097.01.T01:intron 45.0%
TCCTCCAGACAATTCATCTG+AGG - Chr5:53034321-53034340 None:intergenic 45.0%
TGACTTAGTCGAAACTCCGA+AGG - Chr5:53034750-53034769 None:intergenic 45.0%
TGGCACTTGCTTGCAAAATG+TGG + Chr5:53032840-53032859 MsG0580027097.01.T01:CDS 45.0%
! AGGAGTGTAACATAGCCACT+TGG + Chr5:53034155-53034174 MsG0580027097.01.T01:intron 45.0%
! TGGGGGACTTTTCATTCAAC+CGG + Chr5:53031933-53031952 MsG0580027097.01.T01:intron 45.0%
!! CTAGAGGTGGATTGAAACTC+AGG - Chr5:53033947-53033966 None:intergenic 45.0%
!! CTGATGATGGCCAAAAATGG+TGG + Chr5:53034484-53034503 MsG0580027097.01.T01:CDS 45.0%
!! TTCTTCCAGTTTTGTGCCAG+CGG - Chr5:53033153-53033172 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTTGTA+AGG + Chr5:53032752-53032771 MsG0580027097.01.T01:intron 5.0%
AGCCAGTCTCCTACTAGAGA+TGG + Chr5:53034582-53034601 MsG0580027097.01.T01:CDS 50.0%
AGGTTTACCTGAGGAATGGC+GGG - Chr5:53033514-53033533 None:intergenic 50.0%
CAATTTGGGCAAGCCTTGGT+AGG - Chr5:53031435-53031454 None:intergenic 50.0%
CAGAGTACGTACATGCTAGG+AGG - Chr5:53033912-53033931 None:intergenic 50.0%
CCAACAGCAGCAAGTCAAAC+TGG + Chr5:53033348-53033367 MsG0580027097.01.T01:CDS 50.0%
CCGAGCCTCCTTATACTGAA+AGG + Chr5:53033455-53033474 MsG0580027097.01.T01:CDS 50.0%
CTGACAATTTGGGCAAGCCT+TGG - Chr5:53031439-53031458 None:intergenic 50.0%
GCAATTAAGGCAGCTAGAGG+TGG - Chr5:53033960-53033979 None:intergenic 50.0%
GCCTCCTCAGATGAATTGTC+TGG + Chr5:53034314-53034333 MsG0580027097.01.T01:intron 50.0%
TAAAACGCAAGCCACCAACC+TGG - Chr5:53032960-53032979 None:intergenic 50.0%
TCTTGGTCTCTCGATCCCTT+GGG + Chr5:53031716-53031735 MsG0580027097.01.T01:intron 50.0%
TTAGAGACCCGGAAGCAATG+GGG + Chr5:53031985-53032004 MsG0580027097.01.T01:intron 50.0%
! AGGACCAGAGCATCTGAAGA+AGG + Chr5:53034656-53034675 MsG0580027097.01.T01:CDS 50.0%
! CACCAACCTGGCAAGTTTTG+AGG - Chr5:53032948-53032967 None:intergenic 50.0%
! CTCAAAACTTGCCAGGTTGG+TGG + Chr5:53032946-53032965 MsG0580027097.01.T01:intron 50.0%
! CTTTTGTCCACCAGCCAAGA+TGG - Chr5:53031342-53031361 None:intergenic 50.0%
! TTGACACCTTTTGGCAAGCC+AGG - Chr5:53032792-53032811 None:intergenic 50.0%
!! CCAGTTTGACTTGCTGCTGT+TGG - Chr5:53033351-53033370 None:intergenic 50.0%
!! TGCTTGAAGTGTTGCAGCAC+AGG - Chr5:53035077-53035096 None:intergenic 50.0%
AGGCTCGGGAGTCACAGATT+TGG - Chr5:53033443-53033462 None:intergenic 55.0%
ATGCAGACCATCTTGGCTGG+TGG + Chr5:53031332-53031351 MsG0580027097.01.T01:CDS 55.0%
GCCGCAATTAAGGCAGCTAG+AGG - Chr5:53033963-53033982 None:intergenic 55.0%
GGCTCGGGAGTCACAGATTT+GGG - Chr5:53033442-53033461 None:intergenic 55.0%
GTCTTGGTCTCTCGATCCCT+TGG + Chr5:53031715-53031734 MsG0580027097.01.T01:intron 55.0%
! TGCATCGGGAGCATGTGATC+TGG + Chr5:53031386-53031405 MsG0580027097.01.T01:CDS 55.0%
!!! AGGATTTTGGTGACGTCCGC+TGG + Chr5:53033134-53033153 MsG0580027097.01.T01:CDS 55.0%
!!! AGGGGGTTTTGAGCACCATG+TGG + Chr5:53032232-53032251 MsG0580027097.01.T01:intron 55.0%
AGACACACCCGCCATTCCTC+AGG + Chr5:53033504-53033523 MsG0580027097.01.T01:CDS 60.0%
GACGTCCGCTGGCACAAAAC+TGG + Chr5:53033145-53033164 MsG0580027097.01.T01:CDS 60.0%
! GAGTGGCCTGGCTTGCCAAA+AGG + Chr5:53032783-53032802 MsG0580027097.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 53031288 53035219 53031288 ID=MsG0580027097.01;Name=MsG0580027097.01
Chr5 mRNA 53031288 53035219 53031288 ID=MsG0580027097.01.T01;Parent=MsG0580027097.01;Name=MsG0580027097.01.T01;_AED=0.44;_eAED=0.46;_QI=0|0.5|0.4|1|1|1|5|310|457
Chr5 exon 53031288 53031479 53031288 ID=MsG0580027097.01.T01:exon:17441;Parent=MsG0580027097.01.T01
Chr5 exon 53032774 53032960 53032774 ID=MsG0580027097.01.T01:exon:17442;Parent=MsG0580027097.01.T01
Chr5 exon 53033023 53033525 53033023 ID=MsG0580027097.01.T01:exon:17443;Parent=MsG0580027097.01.T01
Chr5 exon 53034339 53034773 53034339 ID=MsG0580027097.01.T01:exon:17444;Parent=MsG0580027097.01.T01
Chr5 exon 53034853 53035219 53034853 ID=MsG0580027097.01.T01:exon:17445;Parent=MsG0580027097.01.T01
Chr5 CDS 53031288 53031479 53031288 ID=MsG0580027097.01.T01:cds;Parent=MsG0580027097.01.T01
Chr5 CDS 53032774 53032960 53032774 ID=MsG0580027097.01.T01:cds;Parent=MsG0580027097.01.T01
Chr5 CDS 53033023 53033525 53033023 ID=MsG0580027097.01.T01:cds;Parent=MsG0580027097.01.T01
Chr5 CDS 53034339 53034773 53034339 ID=MsG0580027097.01.T01:cds;Parent=MsG0580027097.01.T01
Chr5 CDS 53034853 53034909 53034853 ID=MsG0580027097.01.T01:cds;Parent=MsG0580027097.01.T01
Chr5 three_prime_UTR 53034910 53035219 53034910 ID=MsG0580027097.01.T01:three_prime_utr;Parent=MsG0580027097.01.T01
Gene Sequence

>MsG0580027097.01.T01

ATTCTGAATGATAACAAACGTTTTACATTTTATTGCTTTTCTATATGCAGACCATCTTGGCTGGTGGACAAAAGCAGAATTGCAACCAAAATAAAAAGTGCATCGGGAGCATGTGATCTGGAAAATGTTACATGGAAAAGCAATCCTACCAAGGCTTGCCCAAATTGTCAGCATACTATTGACAATAGTGATGTTGTAAAAGAGTGGCCTGGCTTGCCAAAAGGTGTCAAATTTGATCCATCTGATCAGGAGGTAATTTGGCACTTGCTTGCAAAATGTGGTGTTGGAAATTCAAAACCTCATCCTTTCGTTGATGAGTTTATTATTACTCTTGAAGTGAATGATGGAATTTGTTACACTCATCCTCAAAACTTGCCAGCTTCGATGAAAATGTCAGGTGTTAAGCAAGATGGAAATGCATCCCACTTCTTCCACAGAGCAATTAAGGCTTATAATACTGGCACTCGGAAGCGCCGAAAAATACATGATCAGGATTTTGGTGACGTCCGCTGGCACAAAACTGGAAGAACTAAGCCAGTAATCTTGAATGGGGTTCAAAAAGGCTGTAAAAAGATTATGGTTCTGTATATGAGTAGTGCAGGAGGAGGAAAAGCTGAGAAAACTAATTGGGTTATGCATCAATATCATCTAGGAACAGAAGAGGATGAAAAGGATGGCGAGTTTGTTATCTCCAAAGTGTTTTACCAACAGCAGCAAGTCAAACTGGGTGATAAGGATGAACAAGATATTCCTGAAGCTATTGAAGCAACAATCACTAAAGTGGATCCGGTTACTCCCAAATCTGTGACTCCCGAGCCTCCTTATACTGAAAGGCTGTATTCAGATGGAGATCTAGGACAAGACACACCCGCCATTCCTCAGGAAATTCAACCTTACTGTGAAGAGCAAGCAAAAGATGATCTATCCATGGTAGAAACTGAACATAATGAAGGGACAGATAATAATGAAAATAATGCTGATGATGGTCAAAAATGGTGTGAAGGGACAGATAATATTGAAAATAATGCTGATGATGGCCAAAAATGGTGGGATAGTGAATCACAAAATCTGTTGGATTCACAACAACTGGTTGACGCATTGTCATTGTGTGATGATTTACTTCGTAGCCAGTCTCCTACTAGAGATGGTAAAGATGAAGAACAAAAGAACCAACCAAGCCTTTCTATTTATGCTCAGCTAGGACCAGAGCATCTGAAGAAGGATATTGAAGACTGTCAAAATCTCGTCCTTGAGCCTTCAAATGTAGAGTCAAATGTAGAGAATGACACACCTTCGGAGTTTCGACTAAGTCAATTGGAATTTGGTTCACAAGATAGCTTTATAGCATTTGGTTACAACAAGGTAGTAAAGTAA
Protein sequence

>MsG0580027097.01.T01

ILNDNKRFTFYCFSICRPSWLVDKSRIATKIKSASGACDLENVTWKSNPTKACPNCQHTIDNSDVVKEWPGLPKGVKFDPSDQEVIWHLLAKCGVGNSKPHPFVDEFIITLEVNDGICYTHPQNLPASMKMSGVKQDGNASHFFHRAIKAYNTGTRKRRKIHDQDFGDVRWHKTGRTKPVILNGVQKGCKKIMVLYMSSAGGGKAEKTNWVMHQYHLGTEEDEKDGEFVISKVFYQQQQVKLGDKDEQDIPEAIEATITKVDPVTPKSVTPEPPYTERLYSDGDLGQDTPAIPQEIQPYCEEQAKDDLSMVETEHNEGTDNNENNADDGQKWCEGTDNIENNADDGQKWWDSESQNLLDSQQLVDALSLCDDLLRSQSPTRDGKDEEQKNQPSLSIYAQLGPEHLKKDIEDCQNLVLEPSNVESNVENDTPSEFRLSQLEFGSQDSFIAFGYNKVVK*