Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024383.01.T01 | PNY02810.1 | 87.204 | 211 | 26 | 1 | 44 | 253 | 2 | 212 | 3.19E-129 | 375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024383.01.T01 | Q6I587 | 70.175 | 228 | 59 | 2 | 27 | 253 | 262 | 481 | 7.64E-112 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024383.01.T01 | A0A2K3NIG7 | 87.204 | 211 | 26 | 1 | 44 | 253 | 2 | 212 | 1.53e-129 | 375 |
| MsG0580024383.01.T01 | G7KAQ8 | 93.137 | 204 | 14 | 0 | 50 | 253 | 254 | 457 | 3.37e-129 | 385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048952.01 | MsG0580024383.01 | 0.813807 | 2.123171e-51 | 1.400489e-48 |
| MsG0180000178.01 | MsG0580024383.01 | 0.805682 | 1.186359e-49 | 6.316218e-47 |
| MsG0180000259.01 | MsG0580024383.01 | 0.809426 | 1.903653e-50 | 1.117354e-47 |
| MsG0180001565.01 | MsG0580024383.01 | 0.815127 | 1.084051e-51 | 7.410173e-49 |
| MsG0180003858.01 | MsG0580024383.01 | 0.802001 | 6.901580e-49 | 3.343198e-46 |
| MsG0180004114.01 | MsG0580024383.01 | 0.821140 | 4.730671e-53 | 3.816996e-50 |
| MsG0180004147.01 | MsG0580024383.01 | 0.829451 | 5.110534e-55 | 5.232399e-52 |
| MsG0180004258.01 | MsG0580024383.01 | 0.833538 | 5.034028e-56 | 5.814897e-53 |
| MsG0180004495.01 | MsG0580024383.01 | 0.824020 | 1.012185e-53 | 8.858940e-51 |
| MsG0180004711.01 | MsG0580024383.01 | 0.809100 | 2.235417e-50 | 1.300731e-47 |
| MsG0180005021.01 | MsG0580024383.01 | 0.800512 | 1.391990e-48 | 6.493557e-46 |
| MsG0180005022.01 | MsG0580024383.01 | 0.811248 | 7.698144e-51 | 4.741356e-48 |
| MsG0180005024.01 | MsG0580024383.01 | 0.804611 | 1.987850e-49 | 1.029523e-46 |
| MsG0180005025.01 | MsG0580024383.01 | 0.812560 | 3.986215e-51 | 2.542727e-48 |
| MsG0180005275.01 | MsG0580024383.01 | 0.812803 | 3.528022e-51 | 2.264621e-48 |
| MsG0180005664.01 | MsG0580024383.01 | 0.826554 | 2.545592e-54 | 2.395088e-51 |
| MsG0180005692.01 | MsG0580024383.01 | 0.835862 | 1.310526e-56 | 1.623060e-53 |
| MsG0180006000.01 | MsG0580024383.01 | 0.817092 | 3.945765e-52 | 2.846359e-49 |
| MsG0280010779.01 | MsG0580024383.01 | 0.836212 | 1.067887e-56 | 1.336902e-53 |
| MsG0280010785.01 | MsG0580024383.01 | 0.803982 | 2.688331e-49 | 1.370025e-46 |
| MsG0280011282.01 | MsG0580024383.01 | 0.804590 | 2.008148e-49 | 1.039464e-46 |
| MsG0380012021.01 | MsG0580024383.01 | 0.829772 | 4.269688e-55 | 4.413376e-52 |
| MsG0380012033.01 | MsG0580024383.01 | 0.802807 | 4.707684e-49 | 2.327995e-46 |
| MsG0380012101.01 | MsG0580024383.01 | 0.827598 | 1.431966e-54 | 1.388706e-51 |
| MsG0380014387.01 | MsG0580024383.01 | 0.804406 | 2.193209e-49 | 1.129869e-46 |
| MsG0380014754.01 | MsG0580024383.01 | 0.808107 | 3.644063e-50 | 2.065459e-47 |
| MsG0480018780.01 | MsG0580024383.01 | 0.808193 | 3.493357e-50 | 1.984645e-47 |
| MsG0480019034.01 | MsG0580024383.01 | 0.884313 | 2.134231e-71 | 1.401479e-67 |
| MsG0480021225.01 | MsG0580024383.01 | 0.856939 | 2.292136e-62 | 5.562027e-59 |
| MsG0480023110.01 | MsG0580024383.01 | 0.800931 | 1.143021e-48 | 5.389463e-46 |
| MsG0480023450.01 | MsG0580024383.01 | 0.804659 | 1.942891e-49 | 1.007481e-46 |
| MsG0480023500.01 | MsG0580024383.01 | 0.802788 | 4.751085e-49 | 2.348244e-46 |
| MsG0480023903.01 | MsG0580024383.01 | 0.828744 | 7.582217e-55 | 7.603091e-52 |
| MsG0580024382.01 | MsG0580024383.01 | 0.874221 | 7.997341e-68 | 3.570719e-64 |
| MsG0580024383.01 | MsG0580024489.01 | 0.812566 | 3.974453e-51 | 2.535583e-48 |
| MsG0580024383.01 | MsG0580024563.01 | 0.804057 | 2.592492e-49 | 1.323755e-46 |
| MsG0580024383.01 | MsG0580025352.01 | 0.854050 | 1.592774e-61 | 3.512884e-58 |
| MsG0580024383.01 | MsG0580025614.01 | 0.814085 | 1.843604e-51 | 1.225235e-48 |
| MsG0580024383.01 | MsG0580026081.01 | 0.826352 | 2.843226e-54 | 2.659972e-51 |
| MsG0580024383.01 | MsG0580026089.01 | 0.804093 | 2.548934e-49 | 1.302669e-46 |
| MsG0580024383.01 | MsG0580027097.01 | 0.862492 | 4.875903e-64 | 1.430767e-60 |
| MsG0580024383.01 | MsG0580027208.01 | 0.800253 | 1.571762e-48 | 7.284275e-46 |
| MsG0580024383.01 | MsG0580028307.01 | 0.801599 | 8.345099e-49 | 4.001297e-46 |
| MsG0580024383.01 | MsG0580029672.01 | 0.836514 | 8.951674e-57 | 1.130590e-53 |
| MsG0580024383.01 | MsG0580029767.01 | 0.806830 | 6.800189e-50 | 3.728229e-47 |
| MsG0580024383.01 | MsG0680030949.01 | 0.811692 | 6.166379e-51 | 3.842467e-48 |
| MsG0580024383.01 | MsG0680031384.01 | 0.819233 | 1.293058e-52 | 9.893803e-50 |
| MsG0580024383.01 | MsG0780037239.01 | 0.815604 | 8.489800e-52 | 5.880351e-49 |
| MsG0580024383.01 | MsG0780038386.01 | 0.803335 | 3.662351e-49 | 1.835472e-46 |
| MsG0580024383.01 | MsG0780038401.01 | 0.814929 | 1.199314e-51 | 8.154195e-49 |
| MsG0580024383.01 | MsG0780039654.01 | 0.807721 | 4.401361e-50 | 2.469617e-47 |
| MsG0580024383.01 | MsG0780039655.01 | 0.806918 | 6.514520e-50 | 3.579763e-47 |
| MsG0580024383.01 | MsG0780040488.01 | 0.807126 | 5.887225e-50 | 3.252367e-47 |
| MsG0580024383.01 | MsG0780040541.01 | 0.807997 | 3.845590e-50 | 2.173406e-47 |
| MsG0580024383.01 | MsG0780040601.01 | 0.815490 | 9.003539e-52 | 6.216696e-49 |
| MsG0580024383.01 | MsG0780041787.01 | 0.826944 | 2.053848e-54 | 1.954444e-51 |
| MsG0580024383.01 | MsG0880042836.01 | 0.860136 | 2.548779e-63 | 6.895807e-60 |
| MsG0580024383.01 | MsG0880042961.01 | 0.803327 | 3.675388e-49 | 1.841660e-46 |
| MsG0580024383.01 | MsG0880043516.01 | 0.825472 | 4.601905e-54 | 4.198361e-51 |
| MsG0580024383.01 | MsG0880043547.01 | 0.810970 | 8.842367e-51 | 5.406901e-48 |
| MsG0580024383.01 | MsG0880044080.01 | 0.831084 | 2.039253e-55 | 2.189903e-52 |
| MsG0580024383.01 | MsG0880045888.01 | 0.821465 | 3.980711e-53 | 3.240857e-50 |
| MsG0580024383.01 | MsG0880047226.01 | 0.827924 | 1.195656e-54 | 1.170716e-51 |
| MsG0380015548.01 | MsG0580024383.01 | 0.810683 | 1.020147e-50 | 6.189813e-48 |
| MsG0380015808.01 | MsG0580024383.01 | 0.829490 | 5.000862e-55 | 5.125871e-52 |
| MsG0380016140.01 | MsG0580024383.01 | 0.854349 | 1.306136e-61 | 2.908298e-58 |
| MsG0380016909.01 | MsG0580024383.01 | 0.824328 | 8.564984e-54 | 7.562317e-51 |
| MsG0380016994.01 | MsG0580024383.01 | 0.809003 | 2.345559e-50 | 1.361172e-47 |
| MsG0480018128.01 | MsG0580024383.01 | 0.813929 | 1.995547e-51 | 1.320589e-48 |
| MsG0280007609.01 | MsG0580024383.01 | 0.801741 | 7.802523e-49 | 3.754713e-46 |
| MsG0280008270.01 | MsG0580024383.01 | 0.833006 | 6.831945e-56 | 7.767132e-53 |
| MsG0280008280.01 | MsG0580024383.01 | 0.815166 | 1.062489e-51 | 7.270454e-49 |
| MsG0280008590.01 | MsG0580024383.01 | 0.809531 | 1.807088e-50 | 1.063636e-47 |
| MsG0280009514.01 | MsG0580024383.01 | 0.874926 | 4.609364e-68 | 2.113095e-64 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024383.01.T01 | MTR_5g009830 | 93.137 | 204 | 14 | 0 | 50 | 253 | 254 | 457 | 8.54e-133 | 385 |
| MsG0580024383.01.T01 | MTR_8g099095 | 85.854 | 205 | 28 | 1 | 50 | 253 | 253 | 457 | 3.24e-121 | 355 |
| MsG0580024383.01.T01 | MTR_3g051770 | 71.078 | 204 | 59 | 0 | 50 | 253 | 271 | 474 | 3.88e-102 | 307 |
| MsG0580024383.01.T01 | MTR_5g092810 | 71.220 | 205 | 58 | 1 | 50 | 253 | 279 | 483 | 4.47e-102 | 307 |
| MsG0580024383.01.T01 | MTR_0028s0170 | 70.244 | 205 | 60 | 1 | 50 | 253 | 265 | 469 | 7.33e-100 | 301 |
| MsG0580024383.01.T01 | MTR_5g089320 | 68.780 | 205 | 63 | 1 | 50 | 253 | 255 | 459 | 2.43e-98 | 297 |
| MsG0580024383.01.T01 | MTR_5g009830 | 91.304 | 161 | 14 | 0 | 50 | 210 | 254 | 414 | 6.71e-98 | 293 |
| MsG0580024383.01.T01 | MTR_4g132070 | 67.805 | 205 | 65 | 1 | 50 | 253 | 278 | 482 | 1.45e-97 | 295 |
| MsG0580024383.01.T01 | MTR_1g026190 | 67.317 | 205 | 66 | 1 | 50 | 253 | 269 | 473 | 4.73e-91 | 278 |
| MsG0580024383.01.T01 | MTR_1g055255 | 56.757 | 259 | 106 | 4 | 1 | 253 | 257 | 515 | 9.69e-88 | 271 |
| MsG0580024383.01.T01 | MTR_1g041150 | 55.985 | 259 | 108 | 4 | 1 | 253 | 251 | 509 | 1.29e-87 | 271 |
| MsG0580024383.01.T01 | MTR_5g099240 | 55.020 | 249 | 106 | 3 | 11 | 253 | 167 | 415 | 5.83e-87 | 266 |
| MsG0580024383.01.T01 | MTR_5g099240 | 55.020 | 249 | 106 | 3 | 11 | 253 | 239 | 487 | 4.90e-86 | 266 |
| MsG0580024383.01.T01 | MTR_1g096490 | 64.390 | 205 | 72 | 1 | 50 | 253 | 217 | 421 | 7.98e-86 | 264 |
| MsG0580024383.01.T01 | MTR_1g054865 | 53.725 | 255 | 112 | 4 | 5 | 253 | 298 | 552 | 4.45e-84 | 263 |
| MsG0580024383.01.T01 | MTR_7g106710 | 61.463 | 205 | 78 | 1 | 50 | 253 | 322 | 526 | 8.99e-84 | 261 |
| MsG0580024383.01.T01 | MTR_7g106710 | 61.463 | 205 | 78 | 1 | 50 | 253 | 322 | 526 | 1.97e-83 | 261 |
| MsG0580024383.01.T01 | MTR_3g098070 | 53.815 | 249 | 109 | 4 | 11 | 253 | 172 | 420 | 3.07e-81 | 252 |
| MsG0580024383.01.T01 | MTR_8g095440 | 56.170 | 235 | 94 | 2 | 20 | 253 | 195 | 421 | 5.04e-81 | 252 |
| MsG0580024383.01.T01 | MTR_4g132040 | 57.561 | 205 | 85 | 2 | 50 | 253 | 283 | 486 | 6.58e-80 | 250 |
| MsG0580024383.01.T01 | MTR_3g098090 | 52.033 | 246 | 109 | 2 | 9 | 253 | 186 | 423 | 9.31e-80 | 248 |
| MsG0580024383.01.T01 | MTR_4g107490 | 52.195 | 205 | 97 | 1 | 50 | 253 | 260 | 464 | 7.94e-69 | 221 |
| MsG0580024383.01.T01 | MTR_7g091890 | 43.750 | 256 | 138 | 3 | 4 | 253 | 194 | 449 | 2.90e-64 | 209 |
| MsG0580024383.01.T01 | MTR_1g052530 | 49.268 | 205 | 103 | 1 | 50 | 253 | 239 | 443 | 9.83e-63 | 205 |
| MsG0580024383.01.T01 | MTR_7g068710 | 48.293 | 205 | 105 | 1 | 50 | 253 | 243 | 447 | 1.47e-62 | 204 |
| MsG0580024383.01.T01 | MTR_7g106710 | 60.000 | 165 | 65 | 1 | 50 | 213 | 322 | 486 | 2.34e-61 | 201 |
| MsG0580024383.01.T01 | MTR_8g095440 | 53.333 | 195 | 82 | 2 | 20 | 213 | 195 | 381 | 3.07e-59 | 193 |
| MsG0580024383.01.T01 | MTR_4g066660 | 44.390 | 205 | 113 | 1 | 50 | 253 | 259 | 463 | 1.02e-55 | 187 |
| MsG0580024383.01.T01 | MTR_5g022030 | 39.623 | 212 | 120 | 3 | 50 | 253 | 288 | 499 | 4.58e-48 | 166 |
| MsG0580024383.01.T01 | MTR_7g091890 | 44.601 | 213 | 112 | 3 | 4 | 210 | 194 | 406 | 8.75e-48 | 164 |
| MsG0580024383.01.T01 | MTR_5g022030 | 39.623 | 212 | 120 | 3 | 50 | 253 | 288 | 499 | 9.86e-48 | 166 |
| MsG0580024383.01.T01 | MTR_1g052530 | 50.303 | 165 | 81 | 1 | 50 | 213 | 239 | 403 | 3.83e-47 | 162 |
| MsG0580024383.01.T01 | MTR_5g089440 | 47.024 | 168 | 33 | 3 | 87 | 253 | 18 | 130 | 4.90e-41 | 140 |
| MsG0580024383.01.T01 | MTR_7g106710 | 57.944 | 107 | 44 | 1 | 50 | 155 | 322 | 428 | 1.41e-34 | 129 |
| MsG0580024383.01.T01 | MTR_3g098070 | 57.009 | 107 | 45 | 1 | 50 | 155 | 216 | 322 | 3.87e-32 | 120 |
| MsG0580024383.01.T01 | MTR_8g079790 | 32.524 | 206 | 134 | 2 | 50 | 250 | 319 | 524 | 2.08e-31 | 122 |
| MsG0580024383.01.T01 | MTR_4g086660 | 31.553 | 206 | 136 | 2 | 50 | 250 | 328 | 533 | 4.23e-31 | 121 |
| MsG0580024383.01.T01 | MTR_5g017830 | 32.039 | 206 | 135 | 2 | 50 | 250 | 325 | 530 | 1.30e-30 | 119 |
| MsG0580024383.01.T01 | MTR_7g106730 | 42.484 | 153 | 66 | 3 | 11 | 149 | 231 | 375 | 1.08e-28 | 112 |
| MsG0580024383.01.T01 | MTR_5g092815 | 55.556 | 90 | 39 | 1 | 50 | 138 | 278 | 367 | 9.76e-25 | 101 |
| MsG0580024383.01.T01 | MTR_3g092230 | 28.514 | 249 | 162 | 7 | 12 | 248 | 286 | 530 | 1.57e-24 | 102 |
| MsG0580024383.01.T01 | MTR_7g118020 | 26.295 | 251 | 170 | 6 | 12 | 250 | 292 | 539 | 5.11e-24 | 100 |
| MsG0580024383.01.T01 | MTR_7g089480 | 28.502 | 207 | 142 | 3 | 50 | 250 | 332 | 538 | 6.69e-23 | 97.8 |
| MsG0580024383.01.T01 | MTR_8g043970 | 29.596 | 223 | 135 | 3 | 50 | 253 | 235 | 454 | 1.17e-21 | 94.0 |
| MsG0580024383.01.T01 | MTR_1g041285 | 35.354 | 99 | 63 | 1 | 156 | 253 | 1 | 99 | 1.00e-13 | 67.0 |
| MsG0580024383.01.T01 | MTR_5g088320 | 36.364 | 99 | 62 | 1 | 156 | 253 | 1 | 99 | 1.82e-13 | 66.6 |
| MsG0580024383.01.T01 | MTR_1g076650 | 37.374 | 99 | 61 | 1 | 156 | 253 | 1 | 99 | 1.82e-13 | 66.6 |
| MsG0580024383.01.T01 | MTR_7g087610 | 35.354 | 99 | 63 | 1 | 156 | 253 | 1 | 99 | 3.87e-13 | 65.5 |
| MsG0580024383.01.T01 | MTR_6g025320 | 35.354 | 99 | 63 | 1 | 156 | 253 | 1 | 99 | 5.64e-13 | 65.1 |
| MsG0580024383.01.T01 | MTR_7g074020 | 36.458 | 96 | 60 | 1 | 159 | 253 | 22 | 117 | 5.77e-12 | 62.8 |
| MsG0580024383.01.T01 | MTR_6g007613 | 39.080 | 87 | 52 | 1 | 168 | 253 | 30 | 116 | 7.91e-12 | 62.0 |
| MsG0580024383.01.T01 | MTR_1g101630 | 34.286 | 105 | 61 | 1 | 20 | 124 | 206 | 302 | 9.88e-12 | 64.7 |
| MsG0580024383.01.T01 | MTR_6g007613 | 39.080 | 87 | 52 | 1 | 168 | 253 | 30 | 116 | 1.30e-11 | 62.0 |
| MsG0580024383.01.T01 | MTR_7g074020 | 36.458 | 96 | 60 | 1 | 159 | 253 | 22 | 117 | 1.66e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024383.01.T01 | AT4G23650 | 72.195 | 205 | 56 | 1 | 50 | 253 | 265 | 469 | 6.83e-106 | 317 |
| MsG0580024383.01.T01 | AT3G20410 | 68.293 | 205 | 64 | 1 | 50 | 253 | 278 | 482 | 1.03e-96 | 293 |
| MsG0580024383.01.T01 | AT3G20410 | 68.293 | 205 | 64 | 1 | 50 | 253 | 278 | 482 | 1.03e-96 | 293 |
| MsG0580024383.01.T01 | AT5G12180 | 66.829 | 205 | 67 | 1 | 50 | 253 | 260 | 464 | 6.40e-96 | 291 |
| MsG0580024383.01.T01 | AT5G19360 | 66.341 | 205 | 68 | 1 | 50 | 253 | 255 | 459 | 1.24e-94 | 287 |
| MsG0580024383.01.T01 | AT1G50700 | 66.341 | 205 | 68 | 1 | 50 | 253 | 260 | 464 | 3.29e-94 | 285 |
| MsG0580024383.01.T01 | AT1G50700 | 66.341 | 205 | 68 | 1 | 50 | 253 | 260 | 464 | 1.50e-93 | 285 |
| MsG0580024383.01.T01 | AT4G21940 | 65.196 | 204 | 71 | 0 | 50 | 253 | 289 | 492 | 4.17e-93 | 283 |
| MsG0580024383.01.T01 | AT4G04720 | 64.706 | 204 | 72 | 0 | 50 | 253 | 267 | 470 | 7.72e-93 | 283 |
| MsG0580024383.01.T01 | AT4G04720 | 64.706 | 204 | 72 | 0 | 50 | 253 | 267 | 470 | 7.72e-93 | 283 |
| MsG0580024383.01.T01 | AT4G21940 | 65.196 | 204 | 71 | 0 | 50 | 253 | 289 | 492 | 2.37e-92 | 283 |
| MsG0580024383.01.T01 | AT4G21940 | 65.196 | 204 | 71 | 0 | 50 | 253 | 289 | 492 | 2.66e-92 | 283 |
| MsG0580024383.01.T01 | AT1G76040 | 64.706 | 204 | 72 | 0 | 50 | 253 | 61 | 264 | 2.31e-91 | 273 |
| MsG0580024383.01.T01 | AT1G76040 | 64.706 | 204 | 72 | 0 | 50 | 253 | 61 | 264 | 2.31e-91 | 273 |
| MsG0580024383.01.T01 | AT1G76040 | 64.706 | 204 | 72 | 0 | 50 | 253 | 299 | 502 | 2.63e-89 | 273 |
| MsG0580024383.01.T01 | AT3G10660 | 58.233 | 249 | 98 | 4 | 11 | 253 | 329 | 577 | 2.91e-89 | 277 |
| MsG0580024383.01.T01 | AT3G10660 | 58.233 | 249 | 98 | 4 | 11 | 253 | 329 | 577 | 2.91e-89 | 277 |
| MsG0580024383.01.T01 | AT4G38230 | 55.020 | 249 | 106 | 3 | 11 | 253 | 23 | 271 | 5.76e-89 | 267 |
| MsG0580024383.01.T01 | AT1G76040 | 64.706 | 204 | 72 | 0 | 50 | 253 | 299 | 502 | 1.53e-88 | 273 |
| MsG0580024383.01.T01 | AT1G61950 | 61.951 | 205 | 77 | 1 | 50 | 253 | 286 | 490 | 5.08e-88 | 271 |
| MsG0580024383.01.T01 | AT1G50700 | 58.874 | 231 | 68 | 2 | 50 | 253 | 260 | 490 | 1.01e-87 | 270 |
| MsG0580024383.01.T01 | AT5G04870 | 56.225 | 249 | 103 | 4 | 11 | 253 | 293 | 541 | 1.08e-87 | 272 |
| MsG0580024383.01.T01 | AT4G38230 | 55.020 | 249 | 106 | 3 | 11 | 253 | 167 | 415 | 2.40e-87 | 268 |
| MsG0580024383.01.T01 | AT4G38230 | 55.020 | 249 | 106 | 3 | 11 | 253 | 167 | 415 | 2.40e-87 | 268 |
| MsG0580024383.01.T01 | AT4G38230 | 55.020 | 249 | 106 | 3 | 11 | 253 | 197 | 445 | 5.11e-87 | 268 |
| MsG0580024383.01.T01 | AT2G17290 | 55.422 | 249 | 105 | 3 | 11 | 253 | 228 | 476 | 5.32e-87 | 268 |
| MsG0580024383.01.T01 | AT2G17290 | 55.422 | 249 | 105 | 3 | 11 | 253 | 228 | 476 | 5.32e-87 | 268 |
| MsG0580024383.01.T01 | AT4G35310 | 56.225 | 249 | 103 | 4 | 11 | 253 | 240 | 488 | 8.55e-87 | 268 |
| MsG0580024383.01.T01 | AT4G35310 | 56.225 | 249 | 103 | 4 | 11 | 253 | 240 | 488 | 8.55e-87 | 268 |
| MsG0580024383.01.T01 | AT4G04710 | 68.557 | 194 | 53 | 3 | 61 | 253 | 250 | 436 | 4.89e-84 | 259 |
| MsG0580024383.01.T01 | AT2G38910 | 53.333 | 255 | 113 | 4 | 5 | 253 | 271 | 525 | 1.02e-83 | 261 |
| MsG0580024383.01.T01 | AT1G35670 | 55.422 | 249 | 105 | 3 | 11 | 253 | 169 | 417 | 1.11e-83 | 258 |
| MsG0580024383.01.T01 | AT4G04710 | 72.414 | 174 | 47 | 1 | 80 | 253 | 237 | 409 | 1.49e-83 | 258 |
| MsG0580024383.01.T01 | AT4G04710 | 72.414 | 174 | 47 | 1 | 80 | 253 | 251 | 423 | 2.17e-83 | 258 |
| MsG0580024383.01.T01 | AT4G09570 | 55.020 | 249 | 106 | 3 | 11 | 253 | 168 | 416 | 2.26e-82 | 255 |
| MsG0580024383.01.T01 | AT4G04710 | 67.857 | 196 | 53 | 4 | 61 | 253 | 250 | 438 | 3.50e-82 | 255 |
| MsG0580024383.01.T01 | AT4G04740 | 52.137 | 234 | 104 | 1 | 20 | 253 | 234 | 459 | 1.48e-79 | 249 |
| MsG0580024383.01.T01 | AT4G04740 | 52.137 | 234 | 104 | 1 | 20 | 253 | 234 | 459 | 1.66e-79 | 248 |
| MsG0580024383.01.T01 | AT4G04740 | 52.137 | 234 | 104 | 1 | 20 | 253 | 234 | 459 | 1.66e-79 | 248 |
| MsG0580024383.01.T01 | AT4G04740 | 52.137 | 234 | 104 | 1 | 20 | 253 | 234 | 459 | 1.66e-79 | 248 |
| MsG0580024383.01.T01 | AT4G04740 | 52.137 | 234 | 104 | 1 | 20 | 253 | 234 | 459 | 1.66e-79 | 248 |
| MsG0580024383.01.T01 | AT4G04740 | 52.137 | 234 | 104 | 1 | 20 | 253 | 234 | 459 | 1.66e-79 | 248 |
| MsG0580024383.01.T01 | AT4G04740 | 52.137 | 234 | 104 | 1 | 20 | 253 | 234 | 459 | 1.66e-79 | 248 |
| MsG0580024383.01.T01 | AT4G04695 | 52.227 | 247 | 110 | 1 | 7 | 253 | 184 | 422 | 6.45e-79 | 246 |
| MsG0580024383.01.T01 | AT5G23580 | 58.537 | 205 | 84 | 1 | 50 | 253 | 209 | 413 | 2.06e-77 | 242 |
| MsG0580024383.01.T01 | AT4G04700 | 53.304 | 227 | 98 | 1 | 27 | 253 | 204 | 422 | 2.96e-75 | 236 |
| MsG0580024383.01.T01 | AT5G12480 | 42.578 | 256 | 141 | 3 | 4 | 253 | 101 | 356 | 3.00e-64 | 207 |
| MsG0580024383.01.T01 | AT3G51850 | 48.293 | 205 | 105 | 1 | 50 | 253 | 241 | 445 | 7.65e-64 | 207 |
| MsG0580024383.01.T01 | AT3G51850 | 48.293 | 205 | 105 | 1 | 50 | 253 | 241 | 445 | 1.99e-63 | 207 |
| MsG0580024383.01.T01 | AT5G12480 | 42.578 | 256 | 141 | 3 | 4 | 253 | 195 | 450 | 2.45e-63 | 207 |
| MsG0580024383.01.T01 | AT5G19450 | 43.359 | 256 | 138 | 4 | 4 | 252 | 193 | 448 | 9.43e-63 | 205 |
| MsG0580024383.01.T01 | AT5G19450 | 43.359 | 256 | 138 | 4 | 4 | 252 | 193 | 448 | 9.43e-63 | 205 |
| MsG0580024383.01.T01 | AT1G74740 | 48.293 | 205 | 105 | 1 | 50 | 253 | 246 | 450 | 4.54e-61 | 201 |
| MsG0580024383.01.T01 | AT2G41860 | 42.578 | 256 | 141 | 3 | 4 | 253 | 190 | 445 | 2.84e-60 | 199 |
| MsG0580024383.01.T01 | AT2G41860 | 42.578 | 256 | 141 | 3 | 4 | 253 | 190 | 445 | 2.93e-60 | 199 |
| MsG0580024383.01.T01 | AT2G31500 | 40.000 | 255 | 147 | 3 | 5 | 253 | 203 | 457 | 1.56e-58 | 195 |
| MsG0580024383.01.T01 | AT3G57530 | 42.188 | 256 | 142 | 3 | 4 | 253 | 199 | 454 | 1.78e-58 | 194 |
| MsG0580024383.01.T01 | AT1G18890 | 47.549 | 204 | 106 | 1 | 50 | 252 | 250 | 453 | 7.02e-58 | 193 |
| MsG0580024383.01.T01 | AT2G35890 | 43.439 | 221 | 115 | 3 | 20 | 238 | 297 | 509 | 1.43e-53 | 181 |
| MsG0580024383.01.T01 | AT2G35890 | 43.439 | 221 | 115 | 3 | 20 | 238 | 297 | 509 | 1.43e-53 | 181 |
| MsG0580024383.01.T01 | AT3G51850 | 46.591 | 176 | 93 | 1 | 50 | 224 | 241 | 416 | 1.26e-47 | 163 |
| MsG0580024383.01.T01 | AT5G66210 | 37.736 | 212 | 124 | 3 | 50 | 253 | 251 | 462 | 5.57e-45 | 157 |
| MsG0580024383.01.T01 | AT2G17890 | 37.736 | 212 | 124 | 3 | 50 | 253 | 297 | 508 | 6.61e-45 | 159 |
| MsG0580024383.01.T01 | AT5G66210 | 37.736 | 212 | 124 | 3 | 50 | 253 | 251 | 462 | 9.66e-45 | 157 |
| MsG0580024383.01.T01 | AT5G66210 | 37.736 | 212 | 124 | 3 | 50 | 253 | 251 | 462 | 2.07e-44 | 157 |
| MsG0580024383.01.T01 | AT5G66210 | 37.736 | 212 | 124 | 3 | 50 | 253 | 251 | 462 | 2.07e-44 | 157 |
| MsG0580024383.01.T01 | AT3G57530 | 41.935 | 217 | 120 | 3 | 4 | 214 | 199 | 415 | 2.33e-44 | 154 |
| MsG0580024383.01.T01 | AT4G36070 | 34.906 | 212 | 130 | 3 | 50 | 253 | 260 | 471 | 3.25e-43 | 154 |
| MsG0580024383.01.T01 | AT4G36070 | 34.906 | 212 | 130 | 3 | 50 | 253 | 260 | 471 | 4.43e-43 | 154 |
| MsG0580024383.01.T01 | AT5G66210 | 38.650 | 163 | 98 | 2 | 50 | 210 | 251 | 413 | 8.49e-34 | 127 |
| MsG0580024383.01.T01 | AT5G66210 | 38.650 | 163 | 98 | 2 | 50 | 210 | 251 | 413 | 8.49e-34 | 127 |
| MsG0580024383.01.T01 | AT3G50530 | 30.097 | 206 | 139 | 2 | 50 | 250 | 370 | 575 | 1.03e-31 | 123 |
| MsG0580024383.01.T01 | AT3G50530 | 30.097 | 206 | 139 | 2 | 50 | 250 | 339 | 544 | 1.34e-31 | 122 |
| MsG0580024383.01.T01 | AT1G49580 | 29.952 | 207 | 139 | 3 | 50 | 250 | 341 | 547 | 1.28e-25 | 105 |
| MsG0580024383.01.T01 | AT3G19100 | 28.846 | 208 | 140 | 2 | 50 | 249 | 335 | 542 | 1.12e-24 | 102 |
| MsG0580024383.01.T01 | AT2G41140 | 26.699 | 206 | 146 | 2 | 50 | 250 | 314 | 519 | 2.91e-21 | 92.8 |
| MsG0580024383.01.T01 | AT3G56760 | 26.214 | 206 | 147 | 2 | 50 | 250 | 315 | 520 | 3.39e-21 | 92.8 |
| MsG0580024383.01.T01 | AT3G49370 | 26.442 | 208 | 146 | 4 | 50 | 252 | 333 | 538 | 6.92e-21 | 92.0 |
| MsG0580024383.01.T01 | AT5G24430 | 26.214 | 206 | 145 | 4 | 50 | 250 | 334 | 537 | 6.27e-20 | 89.0 |
| MsG0580024383.01.T01 | AT2G46700 | 29.474 | 190 | 132 | 2 | 50 | 238 | 153 | 341 | 1.23e-19 | 87.8 |
| MsG0580024383.01.T01 | AT2G46700 | 29.474 | 190 | 132 | 2 | 50 | 238 | 153 | 341 | 1.23e-19 | 87.8 |
| MsG0580024383.01.T01 | AT2G46700 | 27.888 | 251 | 166 | 6 | 12 | 250 | 291 | 538 | 2.07e-19 | 87.4 |
| MsG0580024383.01.T01 | AT5G37780 | 36.364 | 99 | 62 | 1 | 156 | 253 | 1 | 99 | 2.41e-13 | 66.2 |
| MsG0580024383.01.T01 | AT1G66410 | 36.364 | 99 | 62 | 1 | 156 | 253 | 1 | 99 | 2.41e-13 | 66.2 |
| MsG0580024383.01.T01 | AT1G12580 | 35.577 | 104 | 59 | 1 | 20 | 123 | 209 | 304 | 3.14e-13 | 69.3 |
| MsG0580024383.01.T01 | AT5G21274 | 35.354 | 99 | 63 | 1 | 156 | 253 | 1 | 99 | 5.56e-13 | 65.1 |
| MsG0580024383.01.T01 | AT3G43810 | 35.354 | 99 | 63 | 1 | 156 | 253 | 1 | 99 | 5.91e-13 | 65.1 |
| MsG0580024383.01.T01 | AT3G56800 | 35.354 | 99 | 63 | 1 | 156 | 253 | 1 | 99 | 6.03e-13 | 65.1 |
| MsG0580024383.01.T01 | AT2G27030 | 35.354 | 99 | 63 | 1 | 156 | 253 | 1 | 99 | 6.03e-13 | 65.1 |
| MsG0580024383.01.T01 | AT2G41110 | 35.354 | 99 | 63 | 1 | 156 | 253 | 1 | 99 | 6.03e-13 | 65.1 |
| MsG0580024383.01.T01 | AT3G43810 | 35.354 | 99 | 63 | 1 | 156 | 253 | 1 | 99 | 7.58e-13 | 66.2 |
| MsG0580024383.01.T01 | AT2G27030 | 35.354 | 99 | 63 | 1 | 156 | 253 | 1 | 99 | 1.05e-12 | 65.1 |
| MsG0580024383.01.T01 | AT3G22930 | 34.737 | 95 | 61 | 1 | 160 | 253 | 28 | 122 | 3.37e-11 | 59.7 |
Find 43 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTGAAGAAGAAATTAT+TGG | 0.197139 | 5:-4074282 | MsG0580024383.01.T01:CDS |
| CAGCTGAAATTCGTTCTTTA+GGG | 0.203033 | 5:+4075598 | None:intergenic |
| ACAGCTGAAATTCGTTCTTT+AGG | 0.241901 | 5:+4075597 | None:intergenic |
| TGCCCTGAATTGTTTCATTC+TGG | 0.252256 | 5:+4074594 | None:intergenic |
| ATCTTTGATGCTATTCTTCA+TGG | 0.260977 | 5:-4075702 | MsG0580024383.01.T01:CDS |
| CGAAATCTTAGTACCTAGTT+TGG | 0.279329 | 5:+4074182 | None:intergenic |
| ACTAAGAGCAAAAGAGAATA+AGG | 0.289472 | 5:+4075855 | None:intergenic |
| TAACCAGAATGAAACAATTC+AGG | 0.291185 | 5:-4074597 | MsG0580024383.01.T01:CDS |
| GAAATCTTAGTACCTAGTTT+GGG | 0.314434 | 5:+4074183 | None:intergenic |
| TTTGATTACAGTTTAGTATA+TGG | 0.318415 | 5:-4075786 | MsG0580024383.01.T01:CDS |
| AACACAAAGTTTATCGAATT+CGG | 0.321784 | 5:+4075888 | None:intergenic |
| CAAACTAGGTACTAAGATTT+CGG | 0.342242 | 5:-4074181 | MsG0580024383.01.T01:CDS |
| CAGGCTGATGTTGACGGAAA+TGG | 0.364374 | 5:-4073610 | MsG0580024383.01.T01:CDS |
| AATATTCAAAAGCTTTGTAT+AGG | 0.371934 | 5:+4073521 | None:intergenic |
| TTTCTGTGAAGAAAATGAAC+AGG | 0.394373 | 5:-4075727 | MsG0580024383.01.T01:CDS |
| TTGATTTCGCATCTGATCCT+TGG | 0.407753 | 5:-4075674 | MsG0580024383.01.T01:CDS |
| TATAAATTCAATATAATCAA+TGG | 0.429517 | 5:+4073585 | None:intergenic |
| ATTTCAGCTGTTGAAGTCCT+TGG | 0.440080 | 5:-4075585 | MsG0580024383.01.T01:intron |
| AGAAGAAATTATTGGCTTGA+AGG | 0.449295 | 5:-4074274 | MsG0580024383.01.T01:CDS |
| TCCACTGTTATCTGTGTCCA+TGG | 0.454584 | 5:+4074239 | None:intergenic |
| GTCTGAAGTGAGGCAGTTGA+TGG | 0.459866 | 5:-4074157 | MsG0580024383.01.T01:CDS |
| ACTAAAGAAAGTAGCTCTAA+AGG | 0.469525 | 5:-4074563 | MsG0580024383.01.T01:intron |
| GAAGGAAATGTTTAAATCCA+TGG | 0.478696 | 5:-4074256 | MsG0580024383.01.T01:CDS |
| ACTAAACTGTAATCAAAGTA+AGG | 0.491261 | 5:+4075792 | None:intergenic |
| TATACACTCCAGACCATCCT+TGG | 0.491365 | 5:-4074666 | MsG0580024383.01.T01:intron |
| CATCTTCTTTCATCCAAGGA+TGG | 0.509474 | 5:+4074653 | None:intergenic |
| TACCATGCACTTGAATAGAA+TGG | 0.512924 | 5:-4073557 | MsG0580024383.01.T01:CDS |
| ATTCAAAAGCTTTGTATAGG+TGG | 0.516357 | 5:+4073524 | None:intergenic |
| TTCCATTCTATTCAAGTGCA+TGG | 0.528987 | 5:+4073555 | None:intergenic |
| AAAGCTGGTCTCCCCAAACT+AGG | 0.529317 | 5:-4074195 | MsG0580024383.01.T01:CDS |
| CATCCTTGGATGAAAGAAGA+TGG | 0.529840 | 5:-4074652 | MsG0580024383.01.T01:CDS |
| TATTTGCAGGCTGATGTTGA+CGG | 0.543234 | 5:-4073616 | MsG0580024383.01.T01:intron |
| AACCAGAATGAAACAATTCA+GGG | 0.543661 | 5:-4074596 | MsG0580024383.01.T01:CDS |
| GCTCCATCTTCTTTCATCCA+AGG | 0.544426 | 5:+4074649 | None:intergenic |
| AGTGAACTCAATGAGGATGC+AGG | 0.551020 | 5:-4075922 | None:intergenic |
| AGTGAGGCAGTTGATGGAAG+CGG | 0.579747 | 5:-4074151 | MsG0580024383.01.T01:intron |
| CTTGAATAGAATGGAAAGAG+AGG | 0.583391 | 5:-4073548 | MsG0580024383.01.T01:CDS |
| AAATCTTAGTACCTAGTTTG+GGG | 0.615766 | 5:+4074184 | None:intergenic |
| TTCTGTGAAGAAAATGAACA+GGG | 0.641705 | 5:-4075726 | MsG0580024383.01.T01:CDS |
| AAGTGTGAGAAAGATCAGAA+AGG | 0.650240 | 5:+4075761 | None:intergenic |
| GTTAAGACAGCAATATCGAG+AGG | 0.695538 | 5:+4074616 | None:intergenic |
| AGATTTCGGAGTCTGAAGTG+AGG | 0.723163 | 5:-4074167 | MsG0580024383.01.T01:CDS |
| TCCATGGACACAGATAACAG+TGG | 0.756645 | 5:-4074240 | MsG0580024383.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTATAAATTATAATAGA+TGG | + | Chr5:4075772-4075791 | None:intergenic | 10.0% |
| !! | TATAAATTCAATATAATCAA+TGG | + | Chr5:4075828-4075847 | None:intergenic | 10.0% |
| !! | TGTTATAAATTATAATAGAT+GGG | + | Chr5:4075771-4075790 | None:intergenic | 10.0% |
| !! | TTAAAAAAAGTAACTAAATA+GGG | - | Chr5:4075027-4075046 | MsG0580024383.01.T01:intron | 10.0% |
| !! | AAAATAGAAAAATGCAATAA+GGG | + | Chr5:4074375-4074394 | None:intergenic | 15.0% |
| !! | ATATAACAAAATGATTGTAA+AGG | + | Chr5:4074881-4074900 | None:intergenic | 15.0% |
| !! | ATATGATTATACAATATCAA+TGG | + | Chr5:4075648-4075667 | None:intergenic | 15.0% |
| !! | ATTATGAATTAAGTAAATGA+CGG | - | Chr5:4075004-4075023 | MsG0580024383.01.T01:intron | 15.0% |
| !! | GTTAAAAAAAGTAACTAAAT+AGG | - | Chr5:4075026-4075045 | MsG0580024383.01.T01:intron | 15.0% |
| !!! | TCATTTTGTTATATAAATCA+AGG | - | Chr5:4074887-4074906 | MsG0580024383.01.T01:intron | 15.0% |
| !!! | TTTCTTTTTTGTAAAATTCA+TGG | - | Chr5:4074230-4074249 | MsG0580024383.01.T01:CDS | 15.0% |
| !! | AAATAGAAAAATGCAATAAG+GGG | + | Chr5:4074374-4074393 | None:intergenic | 20.0% |
| !! | AATTATTCTTAGCAATATCA+TGG | + | Chr5:4074081-4074100 | None:intergenic | 20.0% |
| !! | ACAATATCAATGGAAAATAT+GGG | + | Chr5:4075638-4075657 | None:intergenic | 20.0% |
| !! | ATAATCAAACATTACGTTAT+TGG | + | Chr5:4075345-4075364 | None:intergenic | 20.0% |
| !! | GAAAATAGAAAAATGCAATA+AGG | + | Chr5:4074376-4074395 | None:intergenic | 20.0% |
| !! | GTATAATCATATACGTATTA+GGG | - | Chr5:4075656-4075675 | MsG0580024383.01.T01:CDS | 20.0% |
| !! | TACAATATCAATGGAAAATA+TGG | + | Chr5:4075639-4075658 | None:intergenic | 20.0% |
| !! | TGTATAATCATATACGTATT+AGG | - | Chr5:4075655-4075674 | MsG0580024383.01.T01:CDS | 20.0% |
| !! | TTTGATTACAGTTTAGTATA+TGG | - | Chr5:4073624-4073643 | MsG0580024383.01.T01:intron | 20.0% |
| !!! | AATATTCAAAAGCTTTGTAT+AGG | + | Chr5:4075892-4075911 | None:intergenic | 20.0% |
| !!! | ATTTATAACATCTTATTTGC+AGG | - | Chr5:4075781-4075800 | MsG0580024383.01.T01:CDS | 20.0% |
| !!! | TAGTAAAGTATCTAGAATTA+TGG | - | Chr5:4074927-4074946 | MsG0580024383.01.T01:intron | 20.0% |
| ! | AAACTGTAACATAGAAGTAA+TGG | + | Chr5:4075301-4075320 | None:intergenic | 25.0% |
| ! | AAATCCTTGAGGATAAAAAA+TGG | - | Chr5:4074958-4074977 | MsG0580024383.01.T01:intron | 25.0% |
| ! | AACAAAAGTAAAACTTACCA+AGG | + | Chr5:4073845-4073864 | None:intergenic | 25.0% |
| ! | AACACAAAGTTTATCGAATT+CGG | + | Chr5:4073525-4073544 | None:intergenic | 25.0% |
| ! | AAGTAAAATACAAACCCTTA+TGG | + | Chr5:4073894-4073913 | None:intergenic | 25.0% |
| ! | AATAGAAAAATGCAATAAGG+GGG | + | Chr5:4074373-4074392 | None:intergenic | 25.0% |
| ! | ACTAAACTGTAATCAAAGTA+AGG | + | Chr5:4073621-4073640 | None:intergenic | 25.0% |
| ! | CAAAAAAGAAATATGACACT+TGG | + | Chr5:4074221-4074240 | None:intergenic | 25.0% |
| ! | TGGATACAAATAATCATCAA+GGG | + | Chr5:4075551-4075570 | None:intergenic | 25.0% |
| ! | TGGTTATATTTAAATCCTTG+AGG | - | Chr5:4074947-4074966 | MsG0580024383.01.T01:intron | 25.0% |
| ! | TTGGATACAAATAATCATCA+AGG | + | Chr5:4075552-4075571 | None:intergenic | 25.0% |
| !! | CTTTCTGAAGAAGAAATTAT+TGG | - | Chr5:4075128-4075147 | MsG0580024383.01.T01:intron | 25.0% |
| !! | GAAAATTCTAAATGTTTTGC+AGG | - | Chr5:4075091-4075110 | MsG0580024383.01.T01:intron | 25.0% |
| !! | TTACTAAAAGCTTGATTTTG+AGG | + | Chr5:4074913-4074932 | None:intergenic | 25.0% |
| !! | TTAGCAATACTCGATATTTT+AGG | + | Chr5:4073762-4073781 | None:intergenic | 25.0% |
| !!! | CTTTTCTTTTATTCTGGAAA+GGG | + | Chr5:4074173-4074192 | None:intergenic | 25.0% |
| !!! | TGTTTAGTTTTACACCATAA+GGG | - | Chr5:4073877-4073896 | MsG0580024383.01.T01:intron | 25.0% |
| !!! | TTGTTTAGTTTTACACCATA+AGG | - | Chr5:4073876-4073895 | MsG0580024383.01.T01:intron | 25.0% |
| !!! | TTTACCATTTTTTATCCTCA+AGG | + | Chr5:4074965-4074984 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTATTCTGGAAAG+GGG | + | Chr5:4074172-4074191 | None:intergenic | 25.0% |
| AAATCTTAGTACCTAGTTTG+GGG | + | Chr5:4075229-4075248 | None:intergenic | 30.0% | |
| AACCAGAATGAAACAATTCA+GGG | - | Chr5:4074814-4074833 | MsG0580024383.01.T01:intron | 30.0% | |
| ACTAAGAGCAAAAGAGAATA+AGG | + | Chr5:4073558-4073577 | None:intergenic | 30.0% | |
| ATCTTTGATGCTATTCTTCA+TGG | - | Chr5:4073708-4073727 | MsG0580024383.01.T01:intron | 30.0% | |
| ATTATCACTATCATACTCCT+AGG | + | Chr5:4074544-4074563 | None:intergenic | 30.0% | |
| ATTTGTATCCAAATCCTGAT+TGG | - | Chr5:4075560-4075579 | MsG0580024383.01.T01:intron | 30.0% | |
| CAAACTAGGTACTAAGATTT+CGG | - | Chr5:4075229-4075248 | MsG0580024383.01.T01:intron | 30.0% | |
| CCTTTCCAGAATAAAAGAAA+AGG | - | Chr5:4074171-4074190 | MsG0580024383.01.T01:CDS | 30.0% | |
| GAAATCTTAGTACCTAGTTT+GGG | + | Chr5:4075230-4075249 | None:intergenic | 30.0% | |
| GAAGGAAATGTTTAAATCCA+TGG | - | Chr5:4075154-4075173 | MsG0580024383.01.T01:intron | 30.0% | |
| GATATTGTAGCCATATGATT+GGG | - | Chr5:4074488-4074507 | MsG0580024383.01.T01:intron | 30.0% | |
| GGATACAAATAATCATCAAG+GGG | + | Chr5:4075550-4075569 | None:intergenic | 30.0% | |
| GGTTCTTGTAATTAACGTAA+CGG | - | Chr5:4075581-4075600 | MsG0580024383.01.T01:intron | 30.0% | |
| GTTAATTACAAGAACCAATC+AGG | + | Chr5:4075577-4075596 | None:intergenic | 30.0% | |
| GTTCATATCTCTCAAAGATA+TGG | + | Chr5:4073963-4073982 | None:intergenic | 30.0% | |
| GTTCTTGTAATTAACGTAAC+GGG | - | Chr5:4075582-4075601 | MsG0580024383.01.T01:intron | 30.0% | |
| TAACCAGAATGAAACAATTC+AGG | - | Chr5:4074813-4074832 | MsG0580024383.01.T01:intron | 30.0% | |
| TAGGGAGAAGAAATTCATAA+TGG | - | Chr5:4075045-4075064 | MsG0580024383.01.T01:intron | 30.0% | |
| TCCAGAATAAAAGAAAAGGT+AGG | - | Chr5:4074175-4074194 | MsG0580024383.01.T01:CDS | 30.0% | |
| TGAATAGGATAAAGAGAAGA+TGG | - | Chr5:4074117-4074136 | MsG0580024383.01.T01:intron | 30.0% | |
| TTATCACTATCATACTCCTA+GGG | + | Chr5:4074543-4074562 | None:intergenic | 30.0% | |
| TTCTGTGAAGAAAATGAACA+GGG | - | Chr5:4073684-4073703 | MsG0580024383.01.T01:intron | 30.0% | |
| TTTCTGTGAAGAAAATGAAC+AGG | - | Chr5:4073683-4073702 | MsG0580024383.01.T01:intron | 30.0% | |
| ! | ACCTACCTTTTCTTTTATTC+TGG | + | Chr5:4074179-4074198 | None:intergenic | 30.0% |
| ! | ATTCAAAAGCTTTGTATAGG+TGG | + | Chr5:4075889-4075908 | None:intergenic | 30.0% |
| ! | CTTTGAGAGATATGAACTTT+AGG | - | Chr5:4073966-4073985 | MsG0580024383.01.T01:intron | 30.0% |
| ! | GAAGAAATTCATAATGGAAC+AGG | - | Chr5:4075051-4075070 | MsG0580024383.01.T01:intron | 30.0% |
| ! | TTTTCATGATACAGCTCAAA+TGG | + | Chr5:4074684-4074703 | None:intergenic | 30.0% |
| !! | ACTAAAGAAAGTAGCTCTAA+AGG | - | Chr5:4074847-4074866 | MsG0580024383.01.T01:intron | 30.0% |
| !! | AGAAGAAATTATTGGCTTGA+AGG | - | Chr5:4075136-4075155 | MsG0580024383.01.T01:intron | 30.0% |
| !! | CCTTTTCTTTTATTCTGGAA+AGG | + | Chr5:4074174-4074193 | None:intergenic | 30.0% |
| !!! | TATTTTGACAACGACAAAAG+CGG | - | Chr5:4075908-4075927 | MsG0580024383.01.T01:CDS | 30.0% |
| AAGAAACAATGCATTTGTCC+AGG | + | Chr5:4074273-4074292 | None:intergenic | 35.0% | |
| AAGTGTGAGAAAGATCAGAA+AGG | + | Chr5:4073652-4073671 | None:intergenic | 35.0% | |
| ACAGCTGAAATTCGTTCTTT+AGG | + | Chr5:4073816-4073835 | None:intergenic | 35.0% | |
| AGTAGCATGTCTCATTGAAT+AGG | - | Chr5:4074102-4074121 | MsG0580024383.01.T01:intron | 35.0% | |
| ATCAAGAGAAGTGGTAAACT+TGG | + | Chr5:4075733-4075752 | None:intergenic | 35.0% | |
| CAGCTGAAATTCGTTCTTTA+GGG | + | Chr5:4073815-4073834 | None:intergenic | 35.0% | |
| CAGGTACTACTAGTATAGAT+GGG | + | Chr5:4075425-4075444 | None:intergenic | 35.0% | |
| CGAAATCTTAGTACCTAGTT+TGG | + | Chr5:4075231-4075250 | None:intergenic | 35.0% | |
| CGATATTGTAGCCATATGAT+TGG | - | Chr5:4074487-4074506 | MsG0580024383.01.T01:intron | 35.0% | |
| CTACGGAAATTAAATTCCAG+TGG | + | Chr5:4075472-4075491 | None:intergenic | 35.0% | |
| CTTGAATAGAATGGAAAGAG+AGG | - | Chr5:4075862-4075881 | MsG0580024383.01.T01:CDS | 35.0% | |
| TACAAGAACCAATCAGGATT+TGG | + | Chr5:4075571-4075590 | None:intergenic | 35.0% | |
| TACCATGCACTTGAATAGAA+TGG | - | Chr5:4075853-4075872 | MsG0580024383.01.T01:CDS | 35.0% | |
| TCTGCATATGTCACATGTAT+CGG | - | Chr5:4075499-4075518 | MsG0580024383.01.T01:intron | 35.0% | |
| TGAAAGTGAATCCGAATAAC+TGG | - | Chr5:4074002-4074021 | MsG0580024383.01.T01:intron | 35.0% | |
| TTCCATTCTATTCAAGTGCA+TGG | + | Chr5:4075858-4075877 | None:intergenic | 35.0% | |
| TTCTATAAATGCAGCACATC+AGG | + | Chr5:4075613-4075632 | None:intergenic | 35.0% | |
| ! | ATGCTGCTTCTTGGTTAAAT+TGG | - | Chr5:4074513-4074532 | MsG0580024383.01.T01:intron | 35.0% |
| ! | TCATAATGGAACAGGATGAA+AGG | - | Chr5:4075059-4075078 | MsG0580024383.01.T01:intron | 35.0% |
| !! | ACTTTTGAAGAGTTGAAAGC+TGG | - | Chr5:4075200-4075219 | MsG0580024383.01.T01:intron | 35.0% |
| !! | ATACTCGATATTTTAGGCCA+AGG | + | Chr5:4073756-4073775 | None:intergenic | 35.0% |
| !! | ATTTTGACAACGACAAAAGC+GGG | - | Chr5:4075909-4075928 | MsG0580024383.01.T01:CDS | 35.0% |
| AAAATGCAATAAGGGGGATG+TGG | + | Chr5:4074367-4074386 | None:intergenic | 40.0% | |
| AGCAGCATAACCCAATCATA+TGG | + | Chr5:4074501-4074520 | None:intergenic | 40.0% | |
| ATCAGTGACATCAAGAGAAG+TGG | + | Chr5:4075742-4075761 | None:intergenic | 40.0% | |
| ATTTCAGCTGTTGAAGTCCT+TGG | - | Chr5:4073825-4073844 | MsG0580024383.01.T01:intron | 40.0% | |
| CATATGCAGAGAGTTAGCTA+CGG | + | Chr5:4075489-4075508 | None:intergenic | 40.0% | |
| CATCCTTGGATGAAAGAAGA+TGG | - | Chr5:4074758-4074777 | MsG0580024383.01.T01:intron | 40.0% | |
| CATCTTCTTTCATCCAAGGA+TGG | + | Chr5:4074760-4074779 | None:intergenic | 40.0% | |
| GAGAAAAGGGAAAAGAGAAC+AGG | + | Chr5:4074652-4074671 | None:intergenic | 40.0% | |
| GCAGGTACTACTAGTATAGA+TGG | + | Chr5:4075426-4075445 | None:intergenic | 40.0% | |
| GTTAAGACAGCAATATCGAG+AGG | + | Chr5:4074797-4074816 | None:intergenic | 40.0% | |
| TATTTGCAGGCTGATGTTGA+CGG | - | Chr5:4075794-4075813 | MsG0580024383.01.T01:CDS | 40.0% | |
| TGCCCTGAATTGTTTCATTC+TGG | + | Chr5:4074819-4074838 | None:intergenic | 40.0% | |
| TTGATTTCGCATCTGATCCT+TGG | - | Chr5:4073736-4073755 | MsG0580024383.01.T01:intron | 40.0% | |
| ! | CATATACGTATTAGGGTGCT+AGG | - | Chr5:4075663-4075682 | MsG0580024383.01.T01:CDS | 40.0% |
| ! | CCACAAAAGTATAACTCTGC+AGG | + | Chr5:4075444-4075463 | None:intergenic | 40.0% |
| ! | CCTGCAGAGTTATACTTTTG+TGG | - | Chr5:4075441-4075460 | MsG0580024383.01.T01:intron | 40.0% |
| ! | CCTTTTTCCTGCCAGTTATT+CGG | + | Chr5:4074016-4074035 | None:intergenic | 40.0% |
| ! | TACTTTTGTGGCTTAACCAC+TGG | - | Chr5:4075453-4075472 | MsG0580024383.01.T01:intron | 40.0% |
| !! | CTTGAATCATGTTGACTCTG+TGG | - | Chr5:4073911-4073930 | MsG0580024383.01.T01:intron | 40.0% |
| !! | TGTAATTAACGTAACGGGTG+AGG | - | Chr5:4075587-4075606 | MsG0580024383.01.T01:CDS | 40.0% |
| AATGGTCCAGGCTAGAGAAA+AGG | + | Chr5:4074666-4074685 | None:intergenic | 45.0% | |
| AGTGAATCCGAATAACTGGC+AGG | - | Chr5:4074006-4074025 | MsG0580024383.01.T01:intron | 45.0% | |
| ATGGTCCAGGCTAGAGAAAA+GGG | + | Chr5:4074665-4074684 | None:intergenic | 45.0% | |
| CCGAATAACTGGCAGGAAAA+AGG | - | Chr5:4074013-4074032 | MsG0580024383.01.T01:intron | 45.0% | |
| GACGTTGCACAACTATTTCC+TGG | - | Chr5:4074252-4074271 | MsG0580024383.01.T01:CDS | 45.0% | |
| GCTCCATCTTCTTTCATCCA+AGG | + | Chr5:4074764-4074783 | None:intergenic | 45.0% | |
| TACAACTACCTTTGCCTCCT+TGG | - | Chr5:4074452-4074471 | MsG0580024383.01.T01:intron | 45.0% | |
| TATACACTCCAGACCATCCT+TGG | - | Chr5:4074744-4074763 | MsG0580024383.01.T01:intron | 45.0% | |
| TATCGAAAGAAAGCGAGCCA+AGG | + | Chr5:4074472-4074491 | None:intergenic | 45.0% | |
| TCCACTGTTATCTGTGTCCA+TGG | + | Chr5:4075174-4075193 | None:intergenic | 45.0% | |
| TCCATGGACACAGATAACAG+TGG | - | Chr5:4075170-4075189 | MsG0580024383.01.T01:intron | 45.0% | |
| TCTTTCATCCAAGGATGGTC+TGG | + | Chr5:4074755-4074774 | None:intergenic | 45.0% | |
| TGATACAGCTCAAATGGTCC+AGG | + | Chr5:4074678-4074697 | None:intergenic | 45.0% | |
| ! | AGATTTCGGAGTCTGAAGTG+AGG | - | Chr5:4075243-4075262 | MsG0580024383.01.T01:intron | 45.0% |
| ! | CTTTTCCCTTTTCTCTAGCC+TGG | - | Chr5:4074657-4074676 | MsG0580024383.01.T01:CDS | 45.0% |
| ! | GATTGGGTTATGCTGCTTCT+TGG | - | Chr5:4074504-4074523 | MsG0580024383.01.T01:intron | 45.0% |
| !! | TGGTTAAATTGGCTTGCCCT+AGG | - | Chr5:4074524-4074543 | MsG0580024383.01.T01:intron | 45.0% |
| AATAAGGGGGATGTGGTGAG+AGG | + | Chr5:4074360-4074379 | None:intergenic | 50.0% | |
| ACGTGCTCACATACACTGCA+TGG | - | Chr5:4074616-4074635 | MsG0580024383.01.T01:CDS | 50.0% | |
| CAGGCTGATGTTGACGGAAA+TGG | - | Chr5:4075800-4075819 | MsG0580024383.01.T01:CDS | 50.0% | |
| ! | AAAGCTGGTCTCCCCAAACT+AGG | - | Chr5:4075215-4075234 | MsG0580024383.01.T01:intron | 50.0% |
| ! | GTCTGAAGTGAGGCAGTTGA+TGG | - | Chr5:4075253-4075272 | MsG0580024383.01.T01:intron | 50.0% |
| ! | GTGGATCAGCTAGGCATTGT+TGG | - | Chr5:4073930-4073949 | MsG0580024383.01.T01:intron | 50.0% |
| ! | GTTGACTCTGTGGATCAGCT+AGG | - | Chr5:4073921-4073940 | MsG0580024383.01.T01:intron | 50.0% |
| !! | AGTGAGGCAGTTGATGGAAG+CGG | - | Chr5:4075259-4075278 | MsG0580024383.01.T01:intron | 50.0% |
| AAAGCGAGCCAAGGAGGCAA+AGG | + | Chr5:4074463-4074482 | None:intergenic | 55.0% | |
| CGAAAGAAAGCGAGCCAAGG+AGG | + | Chr5:4074469-4074488 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 4073498 | 4075934 | 4073498 | ID=MsG0580024383.01;Name=MsG0580024383.01 |
| Chr5 | mRNA | 4073498 | 4075934 | 4073498 | ID=MsG0580024383.01.T01;Parent=MsG0580024383.01;Name=MsG0580024383.01.T01;_AED=0.48;_eAED=0.48;_QI=0|1|0.5|1|1|1|4|0|253 |
| Chr5 | exon | 4075586 | 4075934 | 4075586 | ID=MsG0580024383.01.T01:exon:18884;Parent=MsG0580024383.01.T01 |
| Chr5 | exon | 4074564 | 4074676 | 4074564 | ID=MsG0580024383.01.T01:exon:18883;Parent=MsG0580024383.01.T01 |
| Chr5 | exon | 4074152 | 4074319 | 4074152 | ID=MsG0580024383.01.T01:exon:18882;Parent=MsG0580024383.01.T01 |
| Chr5 | exon | 4073498 | 4073629 | 4073498 | ID=MsG0580024383.01.T01:exon:18881;Parent=MsG0580024383.01.T01 |
| Chr5 | CDS | 4075586 | 4075934 | 4075586 | ID=MsG0580024383.01.T01:cds;Parent=MsG0580024383.01.T01 |
| Chr5 | CDS | 4074564 | 4074676 | 4074564 | ID=MsG0580024383.01.T01:cds;Parent=MsG0580024383.01.T01 |
| Chr5 | CDS | 4074152 | 4074319 | 4074152 | ID=MsG0580024383.01.T01:cds;Parent=MsG0580024383.01.T01 |
| Chr5 | CDS | 4073498 | 4073629 | 4073498 | ID=MsG0580024383.01.T01:cds;Parent=MsG0580024383.01.T01 |
| Gene Sequence |
| Protein sequence |
