AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027128.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027128.01.T01 MTR_6g068990 95.370 216 9 1 64 279 13 227 3.12e-147 412
MsG0580027128.01.T01 MTR_6g068990 72.043 279 20 4 1 279 1 221 2.54e-107 310
MsG0580027128.01.T01 MTR_6g068990 86.339 183 8 2 97 279 16 181 1.71e-93 274
MsG0580027128.01.T01 MTR_6g068990 85.207 169 8 2 111 279 1 152 2.57e-84 249
MsG0580027128.01.T02 MTR_6g068990 95.370 216 9 1 64 279 13 227 3.12e-147 412
MsG0580027128.01.T02 MTR_6g068990 72.043 279 20 4 1 279 1 221 2.54e-107 310
MsG0580027128.01.T02 MTR_6g068990 86.339 183 8 2 97 279 16 181 1.71e-93 274
MsG0580027128.01.T02 MTR_6g068990 85.207 169 8 2 111 279 1 152 2.57e-84 249
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027128.01.T01 AT1G73350 47.350 283 72 7 1 279 1 210 9.54e-54 174
MsG0580027128.01.T01 AT1G73350 46.643 283 72 7 1 279 1 208 8.99e-52 169
MsG0580027128.01.T01 AT1G73350 46.667 240 67 6 68 279 7 213 1.09e-40 140
MsG0580027128.01.T01 AT1G73350 51.337 187 57 4 97 279 16 172 7.59e-36 126
MsG0580027128.01.T01 AT1G73350 51.337 187 57 4 97 279 16 172 7.59e-36 126
MsG0580027128.01.T01 AT1G73350 51.596 188 57 4 96 279 31 188 8.74e-36 127
MsG0580027128.01.T01 AT1G73350 51.087 184 56 4 100 279 17 170 2.08e-34 122
MsG0580027128.01.T02 AT1G73350 47.350 283 72 7 1 279 1 210 9.54e-54 174
MsG0580027128.01.T02 AT1G73350 46.643 283 72 7 1 279 1 208 8.99e-52 169
MsG0580027128.01.T02 AT1G73350 46.667 240 67 6 68 279 7 213 1.09e-40 140
MsG0580027128.01.T02 AT1G73350 51.337 187 57 4 97 279 16 172 7.59e-36 126
MsG0580027128.01.T02 AT1G73350 51.337 187 57 4 97 279 16 172 7.59e-36 126
MsG0580027128.01.T02 AT1G73350 51.596 188 57 4 96 279 31 188 8.74e-36 127
MsG0580027128.01.T02 AT1G73350 51.087 184 56 4 100 279 17 170 2.08e-34 122

Find 10 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGAAATCGTAGTTGATTA+TGG 0.293712 5:+54101152 MsG0580027128.01.T01:exon
ACCTTTGGGGTCGGTAAGAT+TGG 0.364856 5:-54101199 None:intergenic
AAGAAGATAGATAGAGAGAA+TGG 0.425678 5:-54101105 None:intergenic
CTCTATGAGAGACACTGAAA+GGG 0.482170 5:-54101049 None:intergenic
AAATCGTAGTTGATTATGGC+AGG 0.524807 5:+54101156 MsG0580027128.01.T01:exon
ATTATATATACCTTTGGGGT+CGG 0.541483 5:-54101208 None:intergenic
TCTCTATGAGAGACACTGAA+AGG 0.590683 5:-54101050 None:intergenic
GAGAATTATATATACCTTTG+GGG 0.622345 5:-54101212 None:intergenic
ACCAATCTTACCGACCCCAA+AGG 0.660181 5:+54101198 MsG0580027128.01.T01:CDS
TCTATGAGAGACACTGAAAG+GGG 0.688985 5:-54101048 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGACAAAAAAAAAAA+AGG + Chr5:54103334-54103353 MsG0580027128.01.T01:intron 10.0%
!! AAAATGACAAAAAAAAAAAA+GGG + Chr5:54103335-54103354 MsG0580027128.01.T01:intron 10.0%
!! AGTTATATATATGTATTATT+TGG + Chr5:54105337-54105356 MsG0580027128.01.T01:intron 10.0%
!! ATAAAAAAAAAATGCATAAT+TGG + Chr5:54101667-54101686 MsG0580027128.01.T01:intron 10.0%
!! ATTAAAAAAAATGAAAAATG+AGG - Chr5:54101237-54101256 None:intergenic 10.0%
!!! CATTTTTTTTAATGTTTTTA+CGG + Chr5:54101244-54101263 MsG0580027128.01.T01:intron 10.0%
!!! TTTTGATTTTTATTGAATTT+TGG + Chr5:54101283-54101302 MsG0580027128.01.T01:intron 10.0%
!! AGAATTGATTATATTATGTT+TGG + Chr5:54104855-54104874 MsG0580027128.01.T01:intron 15.0%
!! ATCATAAATATATTCAATTC+TGG - Chr5:54104533-54104552 None:intergenic 15.0%
!! GAAGATAAATCATAAATTAT+TGG - Chr5:54104751-54104770 None:intergenic 15.0%
!! TATGAGAAATAAAAAAATAG+AGG + Chr5:54101959-54101978 MsG0580027128.01.T01:intron 15.0%
!! TTTAAATGTATGAAACATTT+AGG + Chr5:54105977-54105996 MsG0580027128.01.T01:three_prime_UTR 15.0%
!!! AAATGTAAGTGTTTTATAAA+AGG - Chr5:54103125-54103144 None:intergenic 15.0%
!!! AATTTTACAGATAAGAAATT+GGG + Chr5:54101322-54101341 MsG0580027128.01.T01:intron 15.0%
!!! ACTGTTTTTTCTAAAATAAA+AGG - Chr5:54103302-54103321 None:intergenic 15.0%
!!! TAATTTTACAGATAAGAAAT+TGG + Chr5:54101321-54101340 MsG0580027128.01.T01:intron 15.0%
!!! TTTAAATCTTTTATTTGAGA+AGG + Chr5:54104724-54104743 MsG0580027128.01.T01:intron 15.0%
!! AAAAAAAAAAAAGAGAGAGA+AGG - Chr5:54101423-54101442 None:intergenic 20.0%
!! AAAAAAAATGCATAATTGGA+AGG + Chr5:54101671-54101690 MsG0580027128.01.T01:intron 20.0%
!! AACAAATTGATTAGAGAAAA+GGG - Chr5:54102588-54102607 None:intergenic 20.0%
!! AATAAAAAAATAGAGGTAGA+AGG + Chr5:54101966-54101985 MsG0580027128.01.T01:intron 20.0%
!! AATATATTTATGATCCAGTA+AGG + Chr5:54104539-54104558 MsG0580027128.01.T01:intron 20.0%
!! ACAGTGTAAAGATAATATTT+AGG + Chr5:54104669-54104688 MsG0580027128.01.T01:intron 20.0%
!! ATATATTTATGATCCAGTAA+GGG + Chr5:54104540-54104559 MsG0580027128.01.T01:intron 20.0%
!! TAAAGATAATATTTAGGAGT+GGG + Chr5:54104675-54104694 MsG0580027128.01.T01:intron 20.0%
!!! AATTTGCTACATTCTTAATA+GGG - Chr5:54102034-54102053 None:intergenic 20.0%
!!! AGATTAGATTTTTTTTATCG+TGG + Chr5:54105148-54105167 MsG0580027128.01.T01:intron 20.0%
!!! GTTTATTTTCCTTTTCATTA+GGG + Chr5:54104782-54104801 MsG0580027128.01.T01:intron 20.0%
!!! TAAGTGTTTTATAAAAGGTA+AGG - Chr5:54103120-54103139 None:intergenic 20.0%
!!! TATCTATATTTTTGCAATAC+AGG + Chr5:54105525-54105544 MsG0580027128.01.T01:intron 20.0%
!!! TTATAAAAGGTAAGGTATTT+CGG - Chr5:54103112-54103131 None:intergenic 20.0%
!!! TTGAGTTTTCAACATTTATT+TGG - Chr5:54103835-54103854 None:intergenic 20.0%
!!! TTGTCATTTTTTATATCAGA+GGG - Chr5:54103533-54103552 None:intergenic 20.0%
!!! TTTATTGAATTTTGGTTACT+GGG + Chr5:54101291-54101310 MsG0580027128.01.T01:intron 20.0%
!!! TTTGTCATTTTTTATATCAG+AGG - Chr5:54103534-54103553 None:intergenic 20.0%
!!! TTTTATTGAATTTTGGTTAC+TGG + Chr5:54101290-54101309 MsG0580027128.01.T01:intron 20.0%
!!! TTTTTCTAAAATAAAAGGCA+TGG - Chr5:54103297-54103316 None:intergenic 20.0%
! AAATATAGCTTCCATGAAAT+AGG - Chr5:54105266-54105285 None:intergenic 25.0%
! AACAAGTTTACAGGAAAATA+AGG + Chr5:54102436-54102455 MsG0580027128.01.T01:intron 25.0%
! AAGTAATTAGCTCATTGAAT+TGG + Chr5:54103883-54103902 MsG0580027128.01.T01:intron 25.0%
! AATGAAAAGGAAAATAAACG+AGG - Chr5:54104781-54104800 None:intergenic 25.0%
! ACATTAAAGTAGATTGAGAA+GGG + Chr5:54102937-54102956 MsG0580027128.01.T01:intron 25.0%
! AGAAAGGAAATGAACATAAA+AGG - Chr5:54104349-54104368 None:intergenic 25.0%
! AGAAGATATACTTACTTACT+TGG + Chr5:54101574-54101593 MsG0580027128.01.T01:intron 25.0%
! AGGAGAATTATATATACCTT+TGG - Chr5:54101217-54101236 None:intergenic 25.0%
! AGTAAATGATACTATGGAAA+GGG + Chr5:54102399-54102418 MsG0580027128.01.T01:intron 25.0%
! ATAAGTAGCAATAACTTATC+AGG + Chr5:54105033-54105052 MsG0580027128.01.T01:intron 25.0%
! CAACAAATTGATTAGAGAAA+AGG - Chr5:54102589-54102608 None:intergenic 25.0%
! CCAATGATTGCAATATATAA+CGG - Chr5:54102519-54102538 None:intergenic 25.0%
! CTATTAAGAATGTAGCAAAT+TGG + Chr5:54102033-54102052 MsG0580027128.01.T01:intron 25.0%
! GAGAATTATATATACCTTTG+GGG - Chr5:54101215-54101234 None:intergenic 25.0%
! GGAAATAGTAAATGATACTA+TGG + Chr5:54102393-54102412 MsG0580027128.01.T01:intron 25.0%
! GGAGAATTATATATACCTTT+GGG - Chr5:54101216-54101235 None:intergenic 25.0%
! GTAAAGATAATATTTAGGAG+TGG + Chr5:54104674-54104693 MsG0580027128.01.T01:intron 25.0%
! TACCAATTAATGCAGTATAA+GGG + Chr5:54102329-54102348 MsG0580027128.01.T01:intron 25.0%
! TAGTAAATGATACTATGGAA+AGG + Chr5:54102398-54102417 MsG0580027128.01.T01:intron 25.0%
! TATATTTATGATCCAGTAAG+GGG + Chr5:54104541-54104560 MsG0580027128.01.T01:intron 25.0%
! TATTTCAATCCCTAATGAAA+AGG - Chr5:54104794-54104813 None:intergenic 25.0%
! TTCATTCAAACTAGTATGTT+TGG + Chr5:54104584-54104603 MsG0580027128.01.T01:intron 25.0%
! TTCTTAAAACTGCTTGAAAA+CGG + Chr5:54104494-54104513 MsG0580027128.01.T01:intron 25.0%
!! AACATACTAGTTTGAATGAA+TGG - Chr5:54104584-54104603 None:intergenic 25.0%
!! AGAATGTTTGACTTATTTAG+AGG + Chr5:54105917-54105936 MsG0580027128.01.T01:three_prime_UTR 25.0%
!! CTTTTCTCTAATCAATTTGT+TGG + Chr5:54102587-54102606 MsG0580027128.01.T01:intron 25.0%
!! GAATAAGCTTTGTAATTTGT+AGG + Chr5:54101993-54102012 MsG0580027128.01.T01:intron 25.0%
!! TCTTTACATGATTCAGTTTT+GGG + Chr5:54102245-54102264 MsG0580027128.01.T01:intron 25.0%
!! TTCAATGAGCTAATTACTTT+TGG - Chr5:54103882-54103901 None:intergenic 25.0%
!! TTCTTTACATGATTCAGTTT+TGG + Chr5:54102244-54102263 MsG0580027128.01.T01:intron 25.0%
!! TTTTCCTTTTTCCTATTTCA+TGG + Chr5:54105252-54105271 MsG0580027128.01.T01:intron 25.0%
!!! ACCATAACAAGTTGTTTTTT+TGG + Chr5:54102645-54102664 MsG0580027128.01.T01:intron 25.0%
!!! CAATTTGCTACATTCTTAAT+AGG - Chr5:54102035-54102054 None:intergenic 25.0%
!!! CCATAACAAGTTGTTTTTTT+GGG + Chr5:54102646-54102665 MsG0580027128.01.T01:intron 25.0%
!!! CGTTTATTTTCCTTTTCATT+AGG + Chr5:54104781-54104800 MsG0580027128.01.T01:intron 25.0%
!!! TCTCGTTTTTTATACAACAT+TGG - Chr5:54102912-54102931 None:intergenic 25.0%
!!! TGAAATACTGGTTTCAATTT+TGG + Chr5:54104807-54104826 MsG0580027128.01.T01:intron 25.0%
!!! TGTCATTTTTTATATCAGAG+GGG - Chr5:54103532-54103551 None:intergenic 25.0%
AAAAAAAAAAAAGGGCAACC+CGG + Chr5:54103343-54103362 MsG0580027128.01.T01:intron 30.0%
AAAAGAAGAAAATGAGGAGT+TGG + Chr5:54106011-54106030 MsG0580027128.01.T01:three_prime_UTR 30.0%
AAAAGGAAAATAAACGAGGA+TGG - Chr5:54104777-54104796 None:intergenic 30.0%
AAGAAGATAGATAGAGAGAA+TGG - Chr5:54101108-54101127 None:intergenic 30.0%
AAGTACCATTGTAATGGTTA+TGG + Chr5:54102289-54102308 MsG0580027128.01.T01:intron 30.0%
ACAGATAAGAAATTGGGTAA+AGG + Chr5:54101328-54101347 MsG0580027128.01.T01:intron 30.0%
AGATGTATGTGAAAGAAACA+TGG - Chr5:54104385-54104404 None:intergenic 30.0%
AGTTAGGTTAAACTTGTAGA+AGG + Chr5:54103054-54103073 MsG0580027128.01.T01:intron 30.0%
ATAATCGATGACAAGACAAT+AGG - Chr5:54103785-54103804 None:intergenic 30.0%
ATCACGTGTTAAAAAAGCTT+TGG - Chr5:54105229-54105248 None:intergenic 30.0%
ATTCTTAATAGGGAGTTCAA+AGG - Chr5:54102024-54102043 None:intergenic 30.0%
CAATTAGATCATTGTAACCA+AGG + Chr5:54102762-54102781 MsG0580027128.01.T01:intron 30.0%
CCGTTATATATTGCAATCAT+TGG + Chr5:54102516-54102535 MsG0580027128.01.T01:intron 30.0%
CTACCAATTAATGCAGTATA+AGG + Chr5:54102328-54102347 MsG0580027128.01.T01:intron 30.0%
CTTATCAGGCAAACTATTTA+AGG + Chr5:54105047-54105066 MsG0580027128.01.T01:intron 30.0%
CTTCAACTACAGTAACAAAT+AGG - Chr5:54101476-54101495 None:intergenic 30.0%
CTTGGTTACAATGATCTAAT+TGG - Chr5:54102764-54102783 None:intergenic 30.0%
GACATTAAAGTAGATTGAGA+AGG + Chr5:54102936-54102955 MsG0580027128.01.T01:intron 30.0%
GATGTATGTGAAAGAAACAT+GGG - Chr5:54104384-54104403 None:intergenic 30.0%
GGTTGTAAAAGAAGAAAATG+AGG + Chr5:54106005-54106024 MsG0580027128.01.T01:three_prime_UTR 30.0%
GTATGAAACATTTAGGAAGA+AGG + Chr5:54105984-54106003 MsG0580027128.01.T01:three_prime_UTR 30.0%
GTGATGCTTCTATTACTAAT+CGG + Chr5:54105630-54105649 MsG0580027128.01.T01:CDS 30.0%
GTTGTATAAAAAACGAGATC+TGG + Chr5:54102914-54102933 MsG0580027128.01.T01:intron 30.0%
TAAGGAGAATTTGTAGCTAT+TGG + Chr5:54105065-54105084 MsG0580027128.01.T01:intron 30.0%
TACAATACACCAAAAATGGT+GGG - Chr5:54103409-54103428 None:intergenic 30.0%
TATCAGAATTCTCCTTAAAG+TGG - Chr5:54105016-54105035 None:intergenic 30.0%
TATCGTGGACAAATCTTAAT+AGG + Chr5:54105163-54105182 MsG0580027128.01.T01:intron 30.0%
TGTAAAAATAGAACTTCCGA+TGG - Chr5:54103811-54103830 None:intergenic 30.0%
TGTTTCTTTCACATACATCT+TGG + Chr5:54104385-54104404 MsG0580027128.01.T01:intron 30.0%
TTACAATGGTACTTTCATCA+AGG - Chr5:54102283-54102302 None:intergenic 30.0%
TTCATTAGGGATTGAAATAC+TGG + Chr5:54104795-54104814 MsG0580027128.01.T01:intron 30.0%
TTCCCTTATACTGCATTAAT+TGG - Chr5:54102334-54102353 None:intergenic 30.0%
! AAAAAAGCTTTGGTTTCATG+TGG - Chr5:54105219-54105238 None:intergenic 30.0%
! AAGCTAGAATTTGTAGCTTT+TGG - Chr5:54104983-54105002 None:intergenic 30.0%
! AGATATATGTTTTGCAATCG+CGG + Chr5:54101789-54101808 MsG0580027128.01.T01:intron 30.0%
! ATTGGTAGTTCAGATCTTTA+AGG - Chr5:54102316-54102335 None:intergenic 30.0%
! TGGATTGATAACAAGTTTAC+AGG + Chr5:54102427-54102446 MsG0580027128.01.T01:intron 30.0%
! TGTCATCGATTATTATCCAT+CGG + Chr5:54103792-54103811 MsG0580027128.01.T01:intron 30.0%
! TGTTAAGATTGCTACTTATC+AGG + Chr5:54105115-54105134 MsG0580027128.01.T01:intron 30.0%
!! ATTATATATACCTTTGGGGT+CGG - Chr5:54101211-54101230 None:intergenic 30.0%
!! CCCAAAAAAACAACTTGTTA+TGG - Chr5:54102649-54102668 None:intergenic 30.0%
!! TGATGAAAGTACCATTGTAA+TGG + Chr5:54102283-54102302 MsG0580027128.01.T01:intron 30.0%
!! TTAGTAATAGAAGCATCACT+AGG - Chr5:54105629-54105648 None:intergenic 30.0%
!!! AATACTGGTTTCAATTTTGG+AGG + Chr5:54104810-54104829 MsG0580027128.01.T01:intron 30.0%
AAATCGTAGTTGATTATGGC+AGG + Chr5:54101156-54101175 MsG0580027128.01.T01:exon 35.0%
AAGGTCCATAACCATTACAA+TGG - Chr5:54102297-54102316 None:intergenic 35.0%
ACGACATAAACAGTGTTTAG+TGG + Chr5:54102677-54102696 MsG0580027128.01.T01:intron 35.0%
ACTATATCTCAAGGAGCAAA+TGG + Chr5:54104254-54104273 MsG0580027128.01.T01:CDS 35.0%
AGAGATTCCTTCATTCCAAT+TGG - Chr5:54102357-54102376 None:intergenic 35.0%
ATACACTGAAACCAGAAAAC+AGG - Chr5:54105499-54105518 None:intergenic 35.0%
ATACTATGGAAAGGGAACTA+TGG + Chr5:54102407-54102426 MsG0580027128.01.T01:intron 35.0%
CAGTACATGCTTCAAAAACA+CGG - Chr5:54106117-54106136 None:intergenic 35.0%
CATATATCTCCTCACTCATT+AGG - Chr5:54101778-54101797 None:intergenic 35.0%
CTTTACCATTAGATACAGAG+CGG + Chr5:54105364-54105383 MsG0580027128.01.T01:intron 35.0%
GCAGAAATCGTAGTTGATTA+TGG + Chr5:54101152-54101171 MsG0580027128.01.T01:exon 35.0%
GCTTCCATGAAATAGGAAAA+AGG - Chr5:54105259-54105278 None:intergenic 35.0%
GGAATTACATGTGTTAGTGT+CGG + Chr5:54101692-54101711 MsG0580027128.01.T01:intron 35.0%
GTACAATACACCAAAAATGG+TGG - Chr5:54103410-54103429 None:intergenic 35.0%
TAAAGTTGTTGTCATGTGAC+TGG - Chr5:54103491-54103510 None:intergenic 35.0%
TAACGGAAGTTTGAGAAGAT+AGG - Chr5:54102502-54102521 None:intergenic 35.0%
TAGAAGGCTTATCTCTTGTT+TGG + Chr5:54103070-54103089 MsG0580027128.01.T01:intron 35.0%
TCAAACTAGTATGTTTGGTC+TGG + Chr5:54104589-54104608 MsG0580027128.01.T01:intron 35.0%
TCTCTGTATCACTTTCTCAA+TGG + Chr5:54102372-54102391 MsG0580027128.01.T01:intron 35.0%
TCTGTTAGCAATTCTCTGAA+TGG + Chr5:54102546-54102565 MsG0580027128.01.T01:intron 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - Chr5:54103437-54103456 None:intergenic 35.0%
TGACGATCTACTATATCTCA+AGG + Chr5:54104245-54104264 MsG0580027128.01.T01:CDS 35.0%
TGATTGTAACCGCTTATGTA+GGG + Chr5:54103755-54103774 MsG0580027128.01.T01:intron 35.0%
TGCGTACAATACACCAAAAA+TGG - Chr5:54103413-54103432 None:intergenic 35.0%
TTACAACTTTGCCTTTGAGT+AGG + Chr5:54103647-54103666 MsG0580027128.01.T01:intron 35.0%
TTCAAAAACACGGCAAAAAC+TGG - Chr5:54106107-54106126 None:intergenic 35.0%
TTGATTGTAACCGCTTATGT+AGG + Chr5:54103754-54103773 MsG0580027128.01.T01:intron 35.0%
! AAAGTTTAAGTTTGCAGCCT+TGG + Chr5:54104218-54104237 MsG0580027128.01.T01:intron 35.0%
! AACAGACAAACAAAGCATTC+TGG - Chr5:54103935-54103954 None:intergenic 35.0%
! AAGGTAAGGTATTTCGGTAT+TGG - Chr5:54103106-54103125 None:intergenic 35.0%
! AAGGTTGATCTCTTAGCATA+TGG - Chr5:54101752-54101771 None:intergenic 35.0%
! AGAAGGCTTATCTCTTGTTT+GGG + Chr5:54103071-54103090 MsG0580027128.01.T01:intron 35.0%
! AGGTAAGGTATTTCGGTATT+GGG - Chr5:54103105-54103124 None:intergenic 35.0%
!! ATGATTGATGATGTGCTTGA+TGG + Chr5:54105853-54105872 MsG0580027128.01.T01:intron 35.0%
!! TCAATTTGTTGGCTCTACTT+TGG + Chr5:54102598-54102617 MsG0580027128.01.T01:intron 35.0%
!! TGGCGTGTTTTGTTAAAAGA+AGG - Chr5:54103226-54103245 None:intergenic 35.0%
!!! ATGATTCAGTTTTGGGAGTT+GGG + Chr5:54102252-54102271 MsG0580027128.01.T01:intron 35.0%
!!! CAGACACAATTTTTTGTTCC+TGG + Chr5:54104411-54104430 MsG0580027128.01.T01:intron 35.0%
!!! TGATGGTAGATCGCTTTTTT+CGG + Chr5:54105870-54105889 MsG0580027128.01.T01:three_prime_UTR 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + Chr5:54103436-54103455 MsG0580027128.01.T01:intron 35.0%
AAACCAGAAAACAGGCATAG+GGG - Chr5:54105491-54105510 None:intergenic 40.0%
AACCTTTCACCTAATGAGTG+AGG + Chr5:54101766-54101785 MsG0580027128.01.T01:intron 40.0%
AAGGGAACCAATTGGAATGA+AGG + Chr5:54102347-54102366 MsG0580027128.01.T01:intron 40.0%
AAGTTCTTCTCCCTGACTTA+AGG + Chr5:54102106-54102125 MsG0580027128.01.T01:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - Chr5:54103443-54103462 None:intergenic 40.0%
AGATTAAACCTAAGCGACCA+AGG + Chr5:54105576-54105595 MsG0580027128.01.T01:CDS 40.0%
AGTCAGGGAGAAGAACTTAA+AGG - Chr5:54102104-54102123 None:intergenic 40.0%
ATAGGTATGCCCTACATAAG+CGG - Chr5:54103767-54103786 None:intergenic 40.0%
ATTTATGATCCAGTAAGGGG+AGG + Chr5:54104544-54104563 MsG0580027128.01.T01:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - Chr5:54103442-54103461 None:intergenic 40.0%
CGCTCTGTATCTAATGGTAA+AGG - Chr5:54105366-54105385 None:intergenic 40.0%
CGGTTACAATCAATGTAGTC+AGG - Chr5:54103747-54103766 None:intergenic 40.0%
CGTCTGTGTTAGTACTTCAT+AGG - Chr5:54101602-54101621 None:intergenic 40.0%
CTCAAAGAAGAAAACCAGCA+AGG - Chr5:54102071-54102090 None:intergenic 40.0%
CTCTATGAGAGACACTGAAA+GGG - Chr5:54101052-54101071 None:intergenic 40.0%
CTTAATAGGGAGTTCAAAGG+AGG - Chr5:54102021-54102040 None:intergenic 40.0%
GAAACCAGAAAACAGGCATA+GGG - Chr5:54105492-54105511 None:intergenic 40.0%
GTAGATTGAGAAGGGAAACA+CGG + Chr5:54102945-54102964 MsG0580027128.01.T01:intron 40.0%
GTGTACTTGCATAGCTATCT+TGG - Chr5:54104651-54104670 None:intergenic 40.0%
GTTCGTAAGAACCTACTCAA+AGG - Chr5:54103661-54103680 None:intergenic 40.0%
TCTATGAGAGACACTGAAAG+GGG - Chr5:54101051-54101070 None:intergenic 40.0%
TCTCTATGAGAGACACTGAA+AGG - Chr5:54101053-54101072 None:intergenic 40.0%
TGAAACCAGAAAACAGGCAT+AGG - Chr5:54105493-54105512 None:intergenic 40.0%
TGCAGTATAAGGGAACCAAT+TGG + Chr5:54102339-54102358 MsG0580027128.01.T01:intron 40.0%
TGGGACTGTTATCTACAGAA+AGG - Chr5:54104365-54104384 None:intergenic 40.0%
TTATATCAGAGGGGTAACCT+TGG - Chr5:54103523-54103542 None:intergenic 40.0%
TTGTATCAACCAGCCAATAG+AGG - Chr5:54104034-54104053 None:intergenic 40.0%
! ATATGTTTTGCAATCGCGGT+TGG + Chr5:54101793-54101812 MsG0580027128.01.T01:intron 40.0%
! TATTTCGGTATTGGGCCTTA+GGG - Chr5:54103097-54103116 None:intergenic 40.0%
!! AATGGTAAAGGTACTGATGC+AGG - Chr5:54105410-54105429 None:intergenic 40.0%
!! CCTAAAGTTGATAACTCTGC+CGG + Chr5:54105788-54105807 MsG0580027128.01.T01:CDS 40.0%
!! TAGGAAGTATCAATCTCCTC+TGG + Chr5:54102184-54102203 MsG0580027128.01.T01:CDS 40.0%
!!! CAGTCTATGCTTGTTTTTGC+TGG + Chr5:54105313-54105332 MsG0580027128.01.T01:intron 40.0%
!!! CATGATTCAGTTTTGGGAGT+TGG + Chr5:54102251-54102270 MsG0580027128.01.T01:intron 40.0%
!!! CTTGCTGGTTTTCTTCTTTG+AGG + Chr5:54102069-54102088 MsG0580027128.01.T01:intron 40.0%
!!! CTTGTTTTCTGTTTCTGCTG+CGG + Chr5:54103000-54103019 MsG0580027128.01.T01:intron 40.0%
!!! GTGGGCAGATCAAGTTTTTT+TGG + Chr5:54102886-54102905 MsG0580027128.01.T01:intron 40.0%
!!! TCGTTTTTGGTCGATTTCGT+GGG + Chr5:54102868-54102887 MsG0580027128.01.T01:intron 40.0%
!!! TGATTCAGTTTTGGGAGTTG+GGG + Chr5:54102253-54102272 MsG0580027128.01.T01:intron 40.0%
AAGAGAGTCGTTCAACGTCT+AGG + Chr5:54102165-54102184 MsG0580027128.01.T01:CDS 45.0%
AAGCAGATGCAAGAAGTTGC+TGG + Chr5:54104052-54104071 MsG0580027128.01.T01:CDS 45.0%
AATTGTCACCTTGTTGCCAG+AGG - Chr5:54102203-54102222 None:intergenic 45.0%
ACGGCAAAAACTGGCACATT+AGG - Chr5:54106098-54106117 None:intergenic 45.0%
ACTAACACAGACGTGAACAC+CGG + Chr5:54101609-54101628 MsG0580027128.01.T01:intron 45.0%
ACTTGCCGCTCTGTATCTAA+TGG - Chr5:54105372-54105391 None:intergenic 45.0%
AGATGAAAGCAAGAGGTGAG+GGG - Chr5:54104158-54104177 None:intergenic 45.0%
AGCAGATGCAAGAAGTTGCT+GGG + Chr5:54104053-54104072 MsG0580027128.01.T01:CDS 45.0%
AGCGTGGAGGTTATCTTCAT+GGG + Chr5:54104077-54104096 MsG0580027128.01.T01:CDS 45.0%
AGTTCCTACGTAGGTTCGAT+TGG - Chr5:54103720-54103739 None:intergenic 45.0%
ATCAACCTGATCCCACTCTT+TGG - Chr5:54105449-54105468 None:intergenic 45.0%
ATCAATCTCCTCTGGCAACA+AGG + Chr5:54102192-54102211 MsG0580027128.01.T01:CDS 45.0%
CAGATGAAAGCAAGAGGTGA+GGG - Chr5:54104159-54104178 None:intergenic 45.0%
CCGGCAGAGTTATCAACTTT+AGG - Chr5:54105791-54105810 None:intergenic 45.0%
CGGCAAAAACTGGCACATTA+GGG - Chr5:54106097-54106116 None:intergenic 45.0%
CGTCACTATTGGACAACACT+CGG + Chr5:54101930-54101949 MsG0580027128.01.T01:intron 45.0%
CTCCTCACTCATTAGGTGAA+AGG - Chr5:54101771-54101790 None:intergenic 45.0%
CTGGTGAAGGGATGTAAAGT+CGG - Chr5:54103697-54103716 None:intergenic 45.0%
GAAAGGGGTAAAACGAGAAG+AGG - Chr5:54101036-54101055 None:intergenic 45.0%
GAAGAGGACTAGGTCAAGTT+AGG + Chr5:54103038-54103057 MsG0580027128.01.T01:intron 45.0%
GACAGCAATCAGTGTTTGTC+AGG + Chr5:54105677-54105696 MsG0580027128.01.T01:CDS 45.0%
GAGAAGATAGGTGTGTGTGT+GGG - Chr5:54102490-54102509 None:intergenic 45.0%
GATCGCTCCTCAACTTTCTT+TGG - Chr5:54105704-54105723 None:intergenic 45.0%
GGAAAAATTCTGCCACGCTA+TGG + Chr5:54101817-54101836 MsG0580027128.01.T01:intron 45.0%
GGAGGTCAAAAGTGATCTAG+AGG + Chr5:54104828-54104847 MsG0580027128.01.T01:intron 45.0%
GGCTCAACACGTAATGGTAA+AGG - Chr5:54105422-54105441 None:intergenic 45.0%
GGCTTATTGCCTTCAAACCT+TGG - Chr5:54105596-54105615 None:intergenic 45.0%
GTCAGGACCAAAGAAAGTTG+AGG + Chr5:54105694-54105713 MsG0580027128.01.T01:CDS 45.0%
GTCTGGATCGAAGAAAGTAG+AGG + Chr5:54105727-54105746 MsG0580027128.01.T01:CDS 45.0%
GTTGTTGTCATGTGACTGGA+AGG - Chr5:54103487-54103506 None:intergenic 45.0%
TAAAGTCGGGGAACGTAACA+CGG - Chr5:54103683-54103702 None:intergenic 45.0%
TAACCTTTGCAACCATGCGT+TGG - Chr5:54101387-54101406 None:intergenic 45.0%
TAATGTGTCAGTGTCGTGTC+CGG - Chr5:54101631-54101650 None:intergenic 45.0%
TAGTAGATCGTCACTGTCCA+AGG - Chr5:54104238-54104257 None:intergenic 45.0%
TCATTGTAACCAAGGTAGCC+AGG + Chr5:54102770-54102789 MsG0580027128.01.T01:intron 45.0%
TGAGAAGATAGGTGTGTGTG+TGG - Chr5:54102491-54102510 None:intergenic 45.0%
TGGTGAAGGGATGTAAAGTC+GGG - Chr5:54103696-54103715 None:intergenic 45.0%
TTGAGCCAAAGCCAAAGAGT+GGG + Chr5:54105435-54105454 MsG0580027128.01.T01:CDS 45.0%
TTTCATGCAACCCTGACACT+GGG - Chr5:54105757-54105776 None:intergenic 45.0%
TTTCCAACGCATGGTTGCAA+AGG + Chr5:54101381-54101400 MsG0580027128.01.T01:CDS 45.0%
! AGACGTTACTTTCCAACGCA+TGG + Chr5:54101372-54101391 MsG0580027128.01.T01:CDS 45.0%
! GTATTTCGGTATTGGGCCTT+AGG - Chr5:54103098-54103117 None:intergenic 45.0%
! TATCTCTTGTTTGGGCCCTA+AGG + Chr5:54103079-54103098 MsG0580027128.01.T01:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + Chr5:54103447-54103466 MsG0580027128.01.T01:intron 45.0%
! TTACCCCTATGCCTGTTTTC+TGG + Chr5:54105485-54105504 MsG0580027128.01.T01:intron 45.0%
! TTAGTGTCGGACACTGACAT+GGG + Chr5:54101705-54101724 MsG0580027128.01.T01:intron 45.0%
!! AAAGTTGATAACTCTGCCGG+AGG + Chr5:54105791-54105810 MsG0580027128.01.T01:CDS 45.0%
!! ACTTTGCTCTGGGTCGTTTT+TGG + Chr5:54102855-54102874 MsG0580027128.01.T01:intron 45.0%
!! GGAGCTTTGTTTATCCTTGC+TGG + Chr5:54102054-54102073 MsG0580027128.01.T01:intron 45.0%
!! TGGGTTGGTGCTATAGAGAT+TGG + Chr5:54101724-54101743 MsG0580027128.01.T01:intron 45.0%
!!! GTCGTTTTTGGTCGATTTCG+TGG + Chr5:54102867-54102886 MsG0580027128.01.T01:intron 45.0%
!!! TTTTTTTTATATATTTTTAC+TGG - Chr5:54101657-54101676 None:intergenic 5.0%
AAACAGGCATAGGGGTAAGC+TGG - Chr5:54105483-54105502 None:intergenic 50.0%
AACAGGCATAGGGGTAAGCT+GGG - Chr5:54105482-54105501 None:intergenic 50.0%
AACTCTGCCGGAGGATTACT+AGG + Chr5:54105800-54105819 MsG0580027128.01.T01:CDS 50.0%
AAGATAGGTGTGTGTGTGGG+TGG - Chr5:54102487-54102506 None:intergenic 50.0%
ACCAATCTTACCGACCCCAA+AGG + Chr5:54101198-54101217 MsG0580027128.01.T01:CDS 50.0%
ACCCAGCAGTACCTTAAGTC+AGG - Chr5:54102120-54102139 None:intergenic 50.0%
ACGTTGAACGACTCTCTTCC+TGG - Chr5:54102163-54102182 None:intergenic 50.0%
CAAAGCCAAAGAGTGGGATC+AGG + Chr5:54105441-54105460 MsG0580027128.01.T01:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG + Chr5:54103503-54103522 MsG0580027128.01.T01:intron 50.0%
CAAGGAGCAAATGGAAGCTG+AGG + Chr5:54104263-54104282 MsG0580027128.01.T01:CDS 50.0%
CATCTGAGCTAGCATATGCC+AGG - Chr5:54105826-54105845 None:intergenic 50.0%
CCAGATGAAAGCAAGAGGTG+AGG - Chr5:54104160-54104179 None:intergenic 50.0%
CCCAGCAGTACCTTAAGTCA+GGG - Chr5:54102119-54102138 None:intergenic 50.0%
CCTAAGCGACCAAGGTTTGA+AGG + Chr5:54105584-54105603 MsG0580027128.01.T01:CDS 50.0%
CCTCACCTCTTGCTTTCATC+TGG + Chr5:54104157-54104176 MsG0580027128.01.T01:intron 50.0%
CCTTCAAACCTTGGTCGCTT+AGG - Chr5:54105587-54105606 None:intergenic 50.0%
CTATGGGGAAGAAGAGGACT+AGG + Chr5:54103028-54103047 MsG0580027128.01.T01:intron 50.0%
CTGCACGATAGCGTCACTAT+TGG + Chr5:54101919-54101938 MsG0580027128.01.T01:intron 50.0%
CTTTCATGCAACCCTGACAC+TGG - Chr5:54105758-54105777 None:intergenic 50.0%
GAACGACTCTCTTCCTGGTT+CGG - Chr5:54102158-54102177 None:intergenic 50.0%
GAGCACCAGATGAAAGCAAG+AGG - Chr5:54104165-54104184 None:intergenic 50.0%
GAGCGTGGAGGTTATCTTCA+TGG + Chr5:54104076-54104095 MsG0580027128.01.T01:CDS 50.0%
GATGAAAGCAAGAGGTGAGG+GGG - Chr5:54104157-54104176 None:intergenic 50.0%
GCAGATGCAAGAAGTTGCTG+GGG + Chr5:54104054-54104073 MsG0580027128.01.T01:CDS 50.0%
GCATCACTAGGAGCTTGCAT+TGG - Chr5:54105617-54105636 None:intergenic 50.0%
GGGATCTTGGCTTCCTCTAT+TGG + Chr5:54104018-54104037 MsG0580027128.01.T01:intron 50.0%
GGTGAAGGGATGTAAAGTCG+GGG - Chr5:54103695-54103714 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG - Chr5:54103481-54103500 None:intergenic 50.0%
GTTGAGCCAAAGCCAAAGAG+TGG + Chr5:54105434-54105453 MsG0580027128.01.T01:CDS 50.0%
GTTGAGGAGCGATCTTTGTC+TGG + Chr5:54105710-54105729 MsG0580027128.01.T01:CDS 50.0%
TAGAGGAACACCCAGTGTCA+GGG + Chr5:54105744-54105763 MsG0580027128.01.T01:CDS 50.0%
TATGATCCAGTAAGGGGAGG+TGG + Chr5:54104547-54104566 MsG0580027128.01.T01:intron 50.0%
TCAGGATCGAGTTCCTACGT+AGG - Chr5:54103729-54103748 None:intergenic 50.0%
TCATGTGACTGGAAGGTCAC+GGG - Chr5:54103480-54103499 None:intergenic 50.0%
TCCTGCGTCGCACTGAAAAA+CGG + Chr5:54104301-54104320 MsG0580027128.01.T01:CDS 50.0%
TCTTGGCTTCCTCTATTGGC+TGG + Chr5:54104022-54104041 MsG0580027128.01.T01:CDS 50.0%
TGACCTGTGCATTCAGAGCA+AGG - Chr5:54103249-54103268 None:intergenic 50.0%
TGTAAACCACCTCCCCTTAC+TGG - Chr5:54104556-54104575 None:intergenic 50.0%
! AGGTTCGATTGGCTGGTGAA+GGG - Chr5:54103709-54103728 None:intergenic 50.0%
! CTGATCCCACTCTTTGGCTT+TGG - Chr5:54105443-54105462 None:intergenic 50.0%
! GGCTTTGGCTCAACACGTAA+TGG - Chr5:54105428-54105447 None:intergenic 50.0%
! GTTAGTGTCGGACACTGACA+TGG + Chr5:54101704-54101723 MsG0580027128.01.T01:intron 50.0%
! TAGGTTCGATTGGCTGGTGA+AGG - Chr5:54103710-54103729 None:intergenic 50.0%
! TGTTTTGCAATCGCGGTTGG+CGG + Chr5:54101796-54101815 MsG0580027128.01.T01:intron 50.0%
!! ACCTTTGGGGTCGGTAAGAT+TGG - Chr5:54101202-54101221 None:intergenic 50.0%
!! ACTTAAGGTACTGCTGGGTC+AGG + Chr5:54102121-54102140 MsG0580027128.01.T01:intron 50.0%
!! CCCTGACTTAAGGTACTGCT+GGG + Chr5:54102116-54102135 MsG0580027128.01.T01:intron 50.0%
!! TCCCTGACTTAAGGTACTGC+TGG + Chr5:54102115-54102134 MsG0580027128.01.T01:intron 50.0%
AAGGTCACGGGTTCAAGTCC+TGG - Chr5:54103468-54103487 None:intergenic 55.0%
ACAGGCATAGGGGTAAGCTG+GGG - Chr5:54105481-54105500 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG + Chr5:54103369-54103388 MsG0580027128.01.T01:intron 55.0%
AGAGCAAAGTCGAAGCACGG+CGG - Chr5:54102845-54102864 None:intergenic 55.0%
AGGAAGCCAAGATCCCTGTC+GGG - Chr5:54104014-54104033 None:intergenic 55.0%
AGGTGTGTGTGTGGGTGGTT+GGG - Chr5:54102482-54102501 None:intergenic 55.0%
ATCGTGCGATCCTACGAGCT+GGG - Chr5:54102803-54102822 None:intergenic 55.0%
CCAGCCAATCGAACCTACGT+AGG + Chr5:54103713-54103732 MsG0580027128.01.T01:intron 55.0%
CCCAGAGCAAAGTCGAAGCA+CGG - Chr5:54102848-54102867 None:intergenic 55.0%
CCGTGCTTCGACTTTGCTCT+GGG + Chr5:54102845-54102864 MsG0580027128.01.T01:intron 55.0%
CCTACGTAGGTTCGATTGGC+TGG - Chr5:54103716-54103735 None:intergenic 55.0%
CCTGCGTCGCACTGAAAAAC+GGG + Chr5:54104302-54104321 MsG0580027128.01.T01:CDS 55.0%
CCTGTGCATTCAGAGCAAGG+TGG - Chr5:54103246-54103265 None:intergenic 55.0%
CTAAAGCTCCCGCATACGCA+GGG + Chr5:54103370-54103389 MsG0580027128.01.T01:intron 55.0%
GAGGAAGCCAAGATCCCTGT+CGG - Chr5:54104015-54104034 None:intergenic 55.0%
GCAGCTCTATGGGGAAGAAG+AGG + Chr5:54103022-54103041 MsG0580027128.01.T01:intron 55.0%
GCTATTGCAGCTCCATAGCG+TGG - Chr5:54101832-54101851 None:intergenic 55.0%
GGAAGAAACCTGTCCGAACC+AGG + Chr5:54102142-54102161 MsG0580027128.01.T01:intron 55.0%
GGAGGTTATCTTCATGGGCG+AGG + Chr5:54104082-54104101 MsG0580027128.01.T01:CDS 55.0%
GGGTGGTTGGGGGATTAAGT+CGG - Chr5:54102470-54102489 None:intergenic 55.0%
GGTTATCTTCATGGGCGAGG+CGG + Chr5:54104085-54104104 MsG0580027128.01.T01:CDS 55.0%
GTAGAGGAACACCCAGTGTC+AGG + Chr5:54105743-54105762 MsG0580027128.01.T01:CDS 55.0%
TAGGTGTGTGTGTGGGTGGT+TGG - Chr5:54102483-54102502 None:intergenic 55.0%
TGCCAGGCCTAGTAATCCTC+CGG - Chr5:54105810-54105829 None:intergenic 55.0%
TGTCGGACACTGACATGGGT+TGG + Chr5:54101709-54101728 MsG0580027128.01.T01:intron 55.0%
TTCTGCTGCGGCAGCTCTAT+GGG + Chr5:54103012-54103031 MsG0580027128.01.T01:intron 55.0%
TTTCTGCTGCGGCAGCTCTA+TGG + Chr5:54103011-54103030 MsG0580027128.01.T01:intron 55.0%
! AAAATGGTGGGACCCCTTCC+CGG - Chr5:54103397-54103416 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - Chr5:54103365-54103384 None:intergenic 55.0%
! CCACCTTGCTCTGAATGCAC+AGG + Chr5:54103243-54103262 MsG0580027128.01.T01:intron 55.0%
! GGAAGGGGTCCCACCATTTT+TGG + Chr5:54103397-54103416 MsG0580027128.01.T01:intron 55.0%
! TCTGATAACGTGCCCCGACA+GGG + Chr5:54103998-54104017 MsG0580027128.01.T01:intron 55.0%
! TTCTGATAACGTGCCCCGAC+AGG + Chr5:54103997-54104016 MsG0580027128.01.T01:intron 55.0%
!! ACTCTCTTCCTGGTTCGGAC+AGG - Chr5:54102153-54102172 None:intergenic 55.0%
!! GTTTTTCAGTGCGACGCAGG+AGG - Chr5:54104302-54104321 None:intergenic 55.0%
AAAGTCGAAGCACGGCGGAG+TGG - Chr5:54102840-54102859 None:intergenic 60.0%
AGGATCGAGTCCCAGCTCGT+AGG + Chr5:54102790-54102809 MsG0580027128.01.T01:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - Chr5:54103514-54103533 None:intergenic 60.0%
CAAGAAGTTGCTGGGGAGCG+TGG + Chr5:54104061-54104080 MsG0580027128.01.T01:CDS 60.0%
CAGCAGCGAACACAGACTCC+AGG - Chr5:54104432-54104451 None:intergenic 60.0%
GATCGTGCGATCCTACGAGC+TGG - Chr5:54102804-54102823 None:intergenic 60.0%
GCCGTGCTTCGACTTTGCTC+TGG + Chr5:54102844-54102863 MsG0580027128.01.T01:intron 60.0%
GGAAGCCAAGATCCCTGTCG+GGG - Chr5:54104013-54104032 None:intergenic 60.0%
GGACTCGATCCTGGCTACCT+TGG - Chr5:54102782-54102801 None:intergenic 60.0%
GGTGTGTGTGTGGGTGGTTG+GGG - Chr5:54102481-54102500 None:intergenic 60.0%
GTGTGTGTGTGGGTGGTTGG+GGG - Chr5:54102480-54102499 None:intergenic 60.0%
TACGAGCTGGGACTCGATCC+TGG - Chr5:54102791-54102810 None:intergenic 60.0%
TCTGCTGCGGCAGCTCTATG+GGG + Chr5:54103013-54103032 MsG0580027128.01.T01:intron 60.0%
TGCCGGAGGATTACTAGGCC+TGG + Chr5:54105805-54105824 MsG0580027128.01.T01:CDS 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - Chr5:54103364-54103383 None:intergenic 60.0%
!! CCCGTTTTTCAGTGCGACGC+AGG - Chr5:54104305-54104324 None:intergenic 60.0%
ACGTGCCCCGACAGGGATCT+TGG + Chr5:54104005-54104024 MsG0580027128.01.T01:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG + Chr5:54103382-54103401 MsG0580027128.01.T01:intron 65.0%
CTTCCCGGACCCTGCGTATG+CGG - Chr5:54103382-54103401 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + Chr5:54103381-54103400 MsG0580027128.01.T01:intron 65.0%
GGCATAGGGGTAAGCTGGGG+TGG - Chr5:54105478-54105497 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+GGG - Chr5:54103381-54103400 None:intergenic 65.0%
! GAAGTTGCTGGGGAGCGTGG+AGG + Chr5:54104064-54104083 MsG0580027128.01.T01:CDS 65.0%
CGCATACGCAGGGTCCGGGA+AGG + Chr5:54103380-54103399 MsG0580027128.01.T01:intron 70.0%
CTCCCGCATACGCAGGGTCC+GGG + Chr5:54103376-54103395 MsG0580027128.01.T01:intron 70.0%
GAAGCACGGCGGAGTGGCTG+AGG - Chr5:54102834-54102853 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + Chr5:54103375-54103394 MsG0580027128.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 54101011 54106139 54101011 ID=MsG0580027128.01;Name=MsG0580027128.01
Chr5 mRNA 54101011 54106139 54101011 ID=MsG0580027128.01.T01;Parent=MsG0580027128.01;Name=MsG0580027128.01.T01;_AED=0.49;_eAED=0.56;_QI=115|0.42|0.5|1|0.28|0.5|8|283|279
Chr5 exon 54101072 54101219 54101072 ID=MsG0580027128.01.T01:exon:40625;Parent=MsG0580027128.01.T01
Chr5 exon 54101011 54101026 54101011 ID=MsG0580027128.01.T01:exon:40624;Parent=MsG0580027128.01.T01
Chr5 five_prime_UTR 54101011 54101026 54101011 ID=MsG0580027128.01.T01:five_prime_utr;Parent=MsG0580027128.01.T01
Chr5 five_prime_UTR 54101072 54101170 54101072 ID=MsG0580027128.01.T01:five_prime_utr;Parent=MsG0580027128.01.T01
Chr5 CDS 54101171 54101219 54101171 ID=MsG0580027128.01.T01:cds;Parent=MsG0580027128.01.T01
Chr5 CDS 54101332 54101402 54101332 ID=MsG0580027128.01.T01:cds;Parent=MsG0580027128.01.T01
Chr5 CDS 54102143 54102213 54102143 ID=MsG0580027128.01.T01:cds;Parent=MsG0580027128.01.T01
Chr5 CDS 54104019 54104106 54104019 ID=MsG0580027128.01.T01:cds;Parent=MsG0580027128.01.T01
Chr5 CDS 54104222 54104385 54104222 ID=MsG0580027128.01.T01:cds;Parent=MsG0580027128.01.T01
Chr5 CDS 54105376 54105462 54105376 ID=MsG0580027128.01.T01:cds;Parent=MsG0580027128.01.T01
Chr5 CDS 54105547 54105856 54105547 ID=MsG0580027128.01.T01:cds;Parent=MsG0580027128.01.T01
Chr5 three_prime_UTR 54105857 54106139 54105857 ID=MsG0580027128.01.T01:three_prime_utr;Parent=MsG0580027128.01.T01
Chr5 mRNA 54101047 54106139 54101047 ID=MsG0580027128.01.T02;Parent=MsG0580027128.01;Name=MsG0580027128.01.T02;_AED=0.49;_eAED=0.56;_QI=124|0.33|0.42|1|0.33|0.57|7|283|279
Chr5 exon 54101047 54101219 54101047 ID=MsG0580027128.01.T02:exon:40632;Parent=MsG0580027128.01.T02
Chr5 five_prime_UTR 54101047 54101170 54101047 ID=MsG0580027128.01.T02:five_prime_utr;Parent=MsG0580027128.01.T02
Chr5 CDS 54101171 54101219 54101171 ID=MsG0580027128.01.T02:cds;Parent=MsG0580027128.01.T02
Chr5 CDS 54101332 54101402 54101332 ID=MsG0580027128.01.T02:cds;Parent=MsG0580027128.01.T02
Chr5 CDS 54102143 54102213 54102143 ID=MsG0580027128.01.T02:cds;Parent=MsG0580027128.01.T02
Chr5 CDS 54104019 54104106 54104019 ID=MsG0580027128.01.T02:cds;Parent=MsG0580027128.01.T02
Chr5 CDS 54104222 54104385 54104222 ID=MsG0580027128.01.T02:cds;Parent=MsG0580027128.01.T02
Chr5 CDS 54105376 54105462 54105376 ID=MsG0580027128.01.T02:cds;Parent=MsG0580027128.01.T02
Chr5 CDS 54105547 54105856 54105547 ID=MsG0580027128.01.T02:cds;Parent=MsG0580027128.01.T02
Chr5 three_prime_UTR 54105857 54106139 54105857 ID=MsG0580027128.01.T02:three_prime_utr;Parent=MsG0580027128.01.T02
Gene Sequence

>MsG0580027128.01.T01

ATGGCAGGAAGAGAAGTTCGTGAATACACCAATCTTACCGACCCCAAAGATAAGAAATTGGGTAAAGGAAAAGATAAGATTGATGATGAAGACGTTACTTTCCAACGCATGGTTGCAAAGGAAGAAACCTGTCCGAACCAGGAAGAGAGTCGTTCAACGTCTAGGAAGTATCAATCTCCTCTGGCAACAAGGGATCTTGGCTTCCTCTATTGGCTGGTTGATACAAGCAGATGCAAGAAGTTGCTGGGGAGCGTGGAGGTTATCTTCATGGGCGAGGCGTTTAAGTTTGCAGCCTTGGACAGTGACGATCTACTATATCTCAAGGAGCAAATGGAAGCTGAGGAAGATGCAGAACGCCTCCTGCGTCGCACTGAAAAACGGGCATTTGCTGCTTTTAAGATATCCTTTTATGTTCATTTCCTTTCTGTAGATAACAGTCCCATATACAGAGCGGCAAGTTTAGCAGATTCTTCACCTGCATCAGTACCTTTACCATTACGTGTTGAGCCAAAGCCAAAGAGTGGGATCAGGCAGCAAGATCTGCTGAAAAAAGTTGTTGAGATTAAACCTAAGCGACCAAGGTTTGAAGGCAATAAGCCAATGCAAGCTCCTAGTGATGCTTCTATTACTAATCGGCAGCATGATCGTGATAAGTTGAAAGACAGCAATCAGTGTTTGTCAGGACCAAAGAAAGTTGAGGAGCGATCTTTGTCTGGATCGAAGAAAGTAGAGGAACACCCAGTGTCAGGGTTGCATGAAAGTGAAACTAAGCCTAAAGTTGATAACTCTGCCGGAGGATTACTAGGCCTGGCATATGCTAGCTCAGATGACGATGAATGA

>MsG0580027128.01.T02

ATGGCAGGAAGAGAAGTTCGTGAATACACCAATCTTACCGACCCCAAAGATAAGAAATTGGGTAAAGGAAAAGATAAGATTGATGATGAAGACGTTACTTTCCAACGCATGGTTGCAAAGGAAGAAACCTGTCCGAACCAGGAAGAGAGTCGTTCAACGTCTAGGAAGTATCAATCTCCTCTGGCAACAAGGGATCTTGGCTTCCTCTATTGGCTGGTTGATACAAGCAGATGCAAGAAGTTGCTGGGGAGCGTGGAGGTTATCTTCATGGGCGAGGCGTTTAAGTTTGCAGCCTTGGACAGTGACGATCTACTATATCTCAAGGAGCAAATGGAAGCTGAGGAAGATGCAGAACGCCTCCTGCGTCGCACTGAAAAACGGGCATTTGCTGCTTTTAAGATATCCTTTTATGTTCATTTCCTTTCTGTAGATAACAGTCCCATATACAGAGCGGCAAGTTTAGCAGATTCTTCACCTGCATCAGTACCTTTACCATTACGTGTTGAGCCAAAGCCAAAGAGTGGGATCAGGCAGCAAGATCTGCTGAAAAAAGTTGTTGAGATTAAACCTAAGCGACCAAGGTTTGAAGGCAATAAGCCAATGCAAGCTCCTAGTGATGCTTCTATTACTAATCGGCAGCATGATCGTGATAAGTTGAAAGACAGCAATCAGTGTTTGTCAGGACCAAAGAAAGTTGAGGAGCGATCTTTGTCTGGATCGAAGAAAGTAGAGGAACACCCAGTGTCAGGGTTGCATGAAAGTGAAACTAAGCCTAAAGTTGATAACTCTGCCGGAGGATTACTAGGCCTGGCATATGCTAGCTCAGATGACGATGAATGA
Protein sequence

>MsG0580027128.01.T01

MAGREVREYTNLTDPKDKKLGKGKDKIDDEDVTFQRMVAKEETCPNQEESRSTSRKYQSPLATRDLGFLYWLVDTSRCKKLLGSVEVIFMGEAFKFAALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFYVHFLSVDNSPIYRAASLADSSPASVPLPLRVEPKPKSGIRQQDLLKKVVEIKPKRPRFEGNKPMQAPSDASITNRQHDRDKLKDSNQCLSGPKKVEERSLSGSKKVEEHPVSGLHESETKPKVDNSAGGLLGLAYASSDDDE*

>MsG0580027128.01.T02

MAGREVREYTNLTDPKDKKLGKGKDKIDDEDVTFQRMVAKEETCPNQEESRSTSRKYQSPLATRDLGFLYWLVDTSRCKKLLGSVEVIFMGEAFKFAALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFYVHFLSVDNSPIYRAASLADSSPASVPLPLRVEPKPKSGIRQQDLLKKVVEIKPKRPRFEGNKPMQAPSDASITNRQHDRDKLKDSNQCLSGPKKVEERSLSGSKKVEEHPVSGLHESETKPKVDNSAGGLLGLAYASSDDDE*