Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027357.01.T01 | XP_003614555.1 | 98.785 | 247 | 3 | 0 | 11 | 257 | 108 | 354 | 1.83E-179 | 507 |
| MsG0580027357.01.T01 | XP_003614555.1 | 32.759 | 174 | 110 | 5 | 38 | 210 | 37 | 204 | 4.35E-13 | 79.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027357.01.T01 | Q8RWA5 | 62.948 | 251 | 78 | 4 | 15 | 251 | 114 | 363 | 1.95E-100 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027357.01.T01 | G7JZG8 | 98.785 | 247 | 3 | 0 | 11 | 257 | 108 | 354 | 8.73e-180 | 507 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280010900.01 | MsG0580027357.01 | 0.826672 | 2.385320e-54 | 2.251981e-51 |
| MsG0580024829.01 | MsG0580027357.01 | 0.830176 | 3.403590e-55 | 3.558916e-52 |
| MsG0580027357.01 | MsG0780036183.01 | 0.808051 | 3.744420e-50 | 2.119214e-47 |
| MsG0580027357.01 | MsG0880044145.01 | 0.801377 | 9.265274e-49 | 4.417970e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0580027357.01 | MsG0380015215.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027357.01.T01 | MTR_5g055410 | 98.785 | 247 | 3 | 0 | 11 | 257 | 108 | 354 | 0.0 | 507 |
| MsG0580027357.01.T01 | MTR_5g055410 | 32.759 | 174 | 110 | 5 | 38 | 210 | 37 | 204 | 5.26e-17 | 79.7 |
| MsG0580027357.01.T01 | MTR_7g109135 | 65.238 | 210 | 66 | 2 | 14 | 223 | 16 | 218 | 1.05e-93 | 275 |
| MsG0580027357.01.T01 | MTR_7g109135 | 65.238 | 210 | 66 | 2 | 14 | 223 | 37 | 239 | 4.48e-93 | 274 |
| MsG0580027357.01.T01 | MTR_1g087840 | 70.556 | 180 | 50 | 1 | 36 | 215 | 134 | 310 | 1.13e-92 | 276 |
| MsG0580027357.01.T01 | MTR_1g087840 | 32.749 | 171 | 105 | 5 | 38 | 204 | 35 | 199 | 4.10e-16 | 76.6 |
| MsG0580027357.01.T01 | MTR_7g109135 | 65.238 | 210 | 66 | 2 | 14 | 223 | 115 | 317 | 5.89e-92 | 274 |
| MsG0580027357.01.T01 | MTR_7g109135 | 29.778 | 225 | 147 | 6 | 6 | 227 | 6 | 222 | 2.75e-18 | 82.8 |
| MsG0580027357.01.T01 | MTR_7g109135 | 61.905 | 210 | 66 | 3 | 14 | 223 | 115 | 310 | 4.05e-84 | 254 |
| MsG0580027357.01.T01 | MTR_7g109135 | 27.948 | 229 | 147 | 7 | 6 | 231 | 6 | 219 | 2.06e-13 | 68.9 |
| MsG0580027357.01.T01 | MTR_8g076760 | 39.086 | 197 | 108 | 3 | 21 | 208 | 112 | 305 | 1.20e-36 | 132 |
| MsG0580027357.01.T01 | MTR_8g076760 | 32.558 | 172 | 108 | 5 | 37 | 206 | 29 | 194 | 3.80e-18 | 82.4 |
| MsG0580027357.01.T01 | MTR_3g098460 | 34.804 | 204 | 119 | 9 | 10 | 208 | 286 | 480 | 5.09e-23 | 97.8 |
| MsG0580027357.01.T01 | MTR_5g081910 | 26.383 | 235 | 151 | 3 | 9 | 223 | 28 | 260 | 3.58e-22 | 92.8 |
| MsG0580027357.01.T01 | MTR_8g096050 | 33.831 | 201 | 116 | 6 | 14 | 208 | 313 | 502 | 4.31e-22 | 95.1 |
| MsG0580027357.01.T01 | MTR_7g084400 | 33.659 | 205 | 117 | 8 | 10 | 208 | 294 | 485 | 6.52e-22 | 94.7 |
| MsG0580027357.01.T01 | MTR_7g084400 | 28.431 | 204 | 130 | 7 | 22 | 222 | 213 | 403 | 7.39e-12 | 65.1 |
| MsG0580027357.01.T01 | MTR_5g081910 | 26.383 | 235 | 151 | 3 | 9 | 223 | 102 | 334 | 9.38e-22 | 92.8 |
| MsG0580027357.01.T01 | MTR_1g036280 | 28.139 | 231 | 123 | 4 | 19 | 209 | 129 | 356 | 1.56e-21 | 92.8 |
| MsG0580027357.01.T01 | MTR_4g114320 | 35.938 | 192 | 101 | 6 | 23 | 208 | 219 | 394 | 2.79e-21 | 92.0 |
| MsG0580027357.01.T01 | MTR_8g027975 | 30.660 | 212 | 124 | 5 | 15 | 208 | 147 | 353 | 4.41e-21 | 91.3 |
| MsG0580027357.01.T01 | MTR_8g027975 | 27.638 | 199 | 132 | 5 | 21 | 213 | 50 | 242 | 9.25e-15 | 73.2 |
| MsG0580027357.01.T01 | MTR_3g104500 | 29.688 | 192 | 121 | 5 | 21 | 208 | 140 | 321 | 6.74e-21 | 90.1 |
| MsG0580027357.01.T01 | MTR_5g009500 | 31.100 | 209 | 123 | 5 | 16 | 208 | 135 | 338 | 7.52e-21 | 90.5 |
| MsG0580027357.01.T01 | MTR_5g009500 | 29.412 | 204 | 132 | 6 | 16 | 213 | 32 | 229 | 2.06e-16 | 77.8 |
| MsG0580027357.01.T01 | MTR_7g064980 | 30.729 | 192 | 118 | 6 | 23 | 209 | 134 | 315 | 1.70e-20 | 89.0 |
| MsG0580027357.01.T01 | MTR_1g012030 | 34.197 | 193 | 110 | 7 | 21 | 209 | 232 | 411 | 1.14e-19 | 87.8 |
| MsG0580027357.01.T01 | MTR_1g012030 | 24.747 | 198 | 130 | 6 | 22 | 216 | 139 | 320 | 7.93e-11 | 62.0 |
| MsG0580027357.01.T01 | MTR_6g091800 | 29.000 | 200 | 123 | 5 | 21 | 208 | 114 | 306 | 1.45e-19 | 86.3 |
| MsG0580027357.01.T01 | MTR_6g091800 | 31.122 | 196 | 119 | 6 | 21 | 206 | 18 | 207 | 3.78e-14 | 71.2 |
| MsG0580027357.01.T01 | MTR_3g107510 | 31.818 | 198 | 120 | 6 | 14 | 208 | 208 | 393 | 2.90e-19 | 86.7 |
| MsG0580027357.01.T01 | MTR_6g034145 | 28.500 | 200 | 124 | 5 | 21 | 208 | 60 | 252 | 5.14e-19 | 84.0 |
| MsG0580027357.01.T01 | MTR_6g034145 | 33.333 | 153 | 89 | 5 | 64 | 206 | 4 | 153 | 1.14e-12 | 66.2 |
| MsG0580027357.01.T01 | MTR_3g104600 | 25.728 | 206 | 129 | 6 | 21 | 208 | 130 | 329 | 8.90e-19 | 84.7 |
| MsG0580027357.01.T01 | MTR_4g088545 | 29.032 | 186 | 128 | 3 | 21 | 204 | 11 | 194 | 9.89e-19 | 83.6 |
| MsG0580027357.01.T01 | MTR_4g088545 | 29.032 | 186 | 128 | 3 | 21 | 204 | 11 | 194 | 1.06e-18 | 82.8 |
| MsG0580027357.01.T01 | MTR_8g066975 | 30.348 | 201 | 126 | 6 | 16 | 208 | 102 | 296 | 1.27e-18 | 83.6 |
| MsG0580027357.01.T01 | MTR_4g088545 | 29.032 | 186 | 128 | 3 | 21 | 204 | 11 | 194 | 1.93e-18 | 83.2 |
| MsG0580027357.01.T01 | MTR_4g119770 | 25.455 | 220 | 148 | 7 | 2 | 208 | 109 | 325 | 2.41e-18 | 83.2 |
| MsG0580027357.01.T01 | MTR_4g119770 | 28.856 | 201 | 119 | 6 | 24 | 207 | 16 | 209 | 5.19e-16 | 76.6 |
| MsG0580027357.01.T01 | MTR_4g057850 | 27.473 | 182 | 127 | 4 | 20 | 198 | 114 | 293 | 5.61e-18 | 82.0 |
| MsG0580027357.01.T01 | MTR_2g436930 | 26.852 | 216 | 142 | 8 | 6 | 208 | 22 | 234 | 1.41e-17 | 79.7 |
| MsG0580027357.01.T01 | MTR_2g436930 | 26.852 | 216 | 142 | 8 | 6 | 208 | 112 | 324 | 3.75e-17 | 79.7 |
| MsG0580027357.01.T01 | MTR_2g436930 | 26.866 | 201 | 127 | 5 | 21 | 207 | 14 | 208 | 4.01e-15 | 74.3 |
| MsG0580027357.01.T01 | MTR_6g091800 | 30.539 | 167 | 107 | 4 | 44 | 208 | 171 | 330 | 6.05e-17 | 79.3 |
| MsG0580027357.01.T01 | MTR_6g092210 | 26.804 | 194 | 129 | 5 | 21 | 208 | 60 | 246 | 7.38e-17 | 78.2 |
| MsG0580027357.01.T01 | MTR_6g092210 | 33.557 | 149 | 88 | 5 | 64 | 206 | 4 | 147 | 1.12e-13 | 69.3 |
| MsG0580027357.01.T01 | MTR_4g119770 | 28.856 | 201 | 119 | 6 | 24 | 207 | 16 | 209 | 1.54e-16 | 77.4 |
| MsG0580027357.01.T01 | MTR_5g030530 | 27.586 | 203 | 133 | 6 | 14 | 208 | 100 | 296 | 2.40e-16 | 77.4 |
| MsG0580027357.01.T01 | MTR_4g012850 | 26.396 | 197 | 119 | 4 | 23 | 208 | 111 | 292 | 2.46e-16 | 77.4 |
| MsG0580027357.01.T01 | MTR_5g081150 | 33.333 | 192 | 114 | 6 | 21 | 208 | 140 | 321 | 6.03e-16 | 76.6 |
| MsG0580027357.01.T01 | MTR_5g081150 | 27.941 | 204 | 129 | 5 | 14 | 207 | 26 | 221 | 2.08e-15 | 75.1 |
| MsG0580027357.01.T01 | MTR_5g081150 | 27.941 | 204 | 129 | 5 | 14 | 207 | 26 | 221 | 6.18e-16 | 75.5 |
| MsG0580027357.01.T01 | MTR_6g091910 | 27.273 | 198 | 127 | 5 | 21 | 208 | 18 | 208 | 6.58e-16 | 74.7 |
| MsG0580027357.01.T01 | MTR_7g068340 | 25.128 | 195 | 127 | 5 | 15 | 208 | 180 | 356 | 7.26e-16 | 76.6 |
| MsG0580027357.01.T01 | MTR_7g068340 | 28.492 | 179 | 108 | 5 | 36 | 208 | 101 | 265 | 3.99e-12 | 65.9 |
| MsG0580027357.01.T01 | MTR_5g081150 | 27.941 | 204 | 129 | 5 | 14 | 207 | 26 | 221 | 7.33e-16 | 75.5 |
| MsG0580027357.01.T01 | MTR_8g092080 | 31.343 | 201 | 118 | 6 | 16 | 213 | 127 | 310 | 7.73e-16 | 76.3 |
| MsG0580027357.01.T01 | MTR_4g094578 | 28.796 | 191 | 120 | 6 | 22 | 206 | 29 | 209 | 1.15e-15 | 75.5 |
| MsG0580027357.01.T01 | MTR_6g015860 | 28.507 | 221 | 136 | 6 | 14 | 221 | 9 | 220 | 1.20e-15 | 75.5 |
| MsG0580027357.01.T01 | MTR_1g090330 | 25.641 | 195 | 137 | 5 | 17 | 207 | 106 | 296 | 1.64e-15 | 75.1 |
| MsG0580027357.01.T01 | MTR_4g016730 | 26.852 | 216 | 123 | 8 | 11 | 219 | 185 | 372 | 2.04e-15 | 75.5 |
| MsG0580027357.01.T01 | MTR_4g016730 | 29.878 | 164 | 100 | 4 | 36 | 192 | 103 | 258 | 2.97e-11 | 63.2 |
| MsG0580027357.01.T01 | MTR_3g100570 | 28.272 | 191 | 131 | 3 | 21 | 208 | 123 | 310 | 3.97e-15 | 73.9 |
| MsG0580027357.01.T01 | MTR_6g091800 | 31.122 | 196 | 119 | 6 | 21 | 206 | 18 | 207 | 1.96e-14 | 71.6 |
| MsG0580027357.01.T01 | MTR_6g091800 | 29.496 | 139 | 80 | 4 | 21 | 147 | 114 | 246 | 3.70e-11 | 62.4 |
| MsG0580027357.01.T01 | MTR_6g091800 | 31.122 | 196 | 119 | 6 | 21 | 206 | 18 | 207 | 2.88e-14 | 70.9 |
| MsG0580027357.01.T01 | MTR_6g091800 | 29.496 | 139 | 80 | 4 | 21 | 147 | 114 | 246 | 3.93e-11 | 62.0 |
| MsG0580027357.01.T01 | MTR_6g034515 | 30.178 | 169 | 100 | 6 | 37 | 204 | 82 | 233 | 3.26e-14 | 71.6 |
| MsG0580027357.01.T01 | MTR_2g102010 | 29.787 | 188 | 98 | 7 | 37 | 208 | 125 | 294 | 8.47e-14 | 70.1 |
| MsG0580027357.01.T01 | MTR_3g025800 | 27.103 | 214 | 125 | 7 | 26 | 213 | 128 | 336 | 9.48e-14 | 70.5 |
| MsG0580027357.01.T01 | MTR_3g025800 | 27.778 | 198 | 121 | 5 | 24 | 204 | 32 | 224 | 1.39e-12 | 67.0 |
| MsG0580027357.01.T01 | MTR_8g068890 | 29.143 | 175 | 117 | 5 | 37 | 208 | 142 | 312 | 4.06e-13 | 68.2 |
| MsG0580027357.01.T01 | MTR_5g032420 | 29.064 | 203 | 133 | 5 | 11 | 208 | 123 | 319 | 6.72e-13 | 67.8 |
| MsG0580027357.01.T01 | MTR_3g462140 | 28.814 | 177 | 104 | 5 | 37 | 206 | 135 | 296 | 9.47e-13 | 67.0 |
| MsG0580027357.01.T01 | MTR_5g073040 | 29.949 | 197 | 119 | 7 | 22 | 215 | 39 | 219 | 1.18e-12 | 67.0 |
| MsG0580027357.01.T01 | MTR_1g097890 | 25.000 | 208 | 134 | 5 | 16 | 219 | 126 | 315 | 1.37e-12 | 66.6 |
| MsG0580027357.01.T01 | MTR_4g005330 | 29.070 | 172 | 110 | 6 | 32 | 202 | 121 | 281 | 2.81e-12 | 65.9 |
| MsG0580027357.01.T01 | MTR_7g083790 | 28.846 | 208 | 125 | 8 | 18 | 219 | 82 | 272 | 2.81e-12 | 66.2 |
| MsG0580027357.01.T01 | MTR_4g005330 | 29.070 | 172 | 110 | 6 | 32 | 202 | 187 | 347 | 2.89e-12 | 66.2 |
| MsG0580027357.01.T01 | MTR_8g099910 | 29.577 | 213 | 118 | 10 | 24 | 221 | 70 | 265 | 3.91e-12 | 65.9 |
| MsG0580027357.01.T01 | MTR_7g015870 | 25.455 | 220 | 149 | 5 | 15 | 227 | 18 | 229 | 4.07e-12 | 65.5 |
| MsG0580027357.01.T01 | MTR_7g015870 | 25.472 | 212 | 143 | 5 | 23 | 227 | 22 | 225 | 6.78e-12 | 64.7 |
| MsG0580027357.01.T01 | MTR_7g084400 | 28.426 | 197 | 127 | 6 | 22 | 215 | 207 | 392 | 7.75e-12 | 65.1 |
| MsG0580027357.01.T01 | MTR_8g098240 | 28.649 | 185 | 118 | 5 | 23 | 204 | 410 | 583 | 1.15e-11 | 64.7 |
| MsG0580027357.01.T01 | MTR_6g091800 | 28.947 | 152 | 99 | 4 | 44 | 193 | 171 | 315 | 1.43e-11 | 63.9 |
| MsG0580027357.01.T01 | MTR_8g019480 | 27.751 | 209 | 113 | 7 | 38 | 226 | 49 | 239 | 3.72e-11 | 62.8 |
| MsG0580027357.01.T01 | MTR_3g104810 | 26.339 | 224 | 122 | 7 | 22 | 221 | 33 | 237 | 6.26e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027357.01.T01 | AT1G25380 | 62.948 | 251 | 78 | 4 | 15 | 251 | 114 | 363 | 1.99e-101 | 300 |
| MsG0580027357.01.T01 | AT1G25380 | 31.868 | 182 | 103 | 6 | 38 | 210 | 37 | 206 | 6.49e-16 | 76.6 |
| MsG0580027357.01.T01 | AT1G25380 | 62.948 | 251 | 78 | 4 | 15 | 251 | 114 | 363 | 1.99e-101 | 300 |
| MsG0580027357.01.T01 | AT1G25380 | 31.868 | 182 | 103 | 6 | 38 | 210 | 37 | 206 | 6.49e-16 | 76.6 |
| MsG0580027357.01.T01 | AT2G47490 | 66.010 | 203 | 66 | 1 | 14 | 216 | 109 | 308 | 6.05e-91 | 271 |
| MsG0580027357.01.T01 | AT2G47490 | 32.022 | 178 | 108 | 6 | 38 | 210 | 33 | 202 | 9.17e-18 | 81.6 |
| MsG0580027357.01.T01 | AT5G66380 | 40.000 | 195 | 107 | 3 | 21 | 208 | 109 | 300 | 1.29e-39 | 139 |
| MsG0580027357.01.T01 | AT5G66380 | 29.167 | 216 | 140 | 7 | 21 | 233 | 9 | 214 | 9.31e-17 | 78.6 |
| MsG0580027357.01.T01 | AT2G37890 | 33.810 | 210 | 119 | 6 | 4 | 209 | 140 | 333 | 3.06e-24 | 99.8 |
| MsG0580027357.01.T01 | AT4G01100 | 30.841 | 214 | 121 | 6 | 15 | 208 | 88 | 294 | 1.97e-23 | 97.1 |
| MsG0580027357.01.T01 | AT4G01100 | 29.282 | 181 | 118 | 5 | 38 | 213 | 8 | 183 | 4.48e-13 | 68.2 |
| MsG0580027357.01.T01 | AT4G01100 | 30.841 | 214 | 121 | 6 | 15 | 208 | 138 | 344 | 4.19e-23 | 96.7 |
| MsG0580027357.01.T01 | AT4G01100 | 28.788 | 198 | 131 | 5 | 21 | 213 | 41 | 233 | 4.61e-15 | 74.3 |
| MsG0580027357.01.T01 | AT4G01100 | 30.841 | 214 | 121 | 6 | 15 | 208 | 152 | 358 | 5.90e-23 | 96.7 |
| MsG0580027357.01.T01 | AT4G01100 | 26.887 | 212 | 131 | 5 | 21 | 213 | 41 | 247 | 4.70e-13 | 68.6 |
| MsG0580027357.01.T01 | AT5G46800 | 31.658 | 199 | 119 | 5 | 16 | 203 | 102 | 294 | 6.67e-23 | 95.5 |
| MsG0580027357.01.T01 | AT5G46800 | 26.702 | 191 | 126 | 6 | 29 | 208 | 15 | 202 | 1.54e-12 | 66.6 |
| MsG0580027357.01.T01 | AT5G46800 | 31.658 | 199 | 119 | 5 | 16 | 203 | 102 | 294 | 6.67e-23 | 95.5 |
| MsG0580027357.01.T01 | AT5G46800 | 26.702 | 191 | 126 | 6 | 29 | 208 | 15 | 202 | 1.54e-12 | 66.6 |
| MsG0580027357.01.T01 | AT5G46800 | 31.658 | 199 | 119 | 5 | 16 | 203 | 102 | 294 | 6.67e-23 | 95.5 |
| MsG0580027357.01.T01 | AT5G46800 | 26.702 | 191 | 126 | 6 | 29 | 208 | 15 | 202 | 1.54e-12 | 66.6 |
| MsG0580027357.01.T01 | AT3G53940 | 32.487 | 197 | 118 | 6 | 21 | 213 | 179 | 364 | 3.31e-22 | 94.4 |
| MsG0580027357.01.T01 | AT3G53940 | 31.250 | 208 | 130 | 7 | 18 | 218 | 69 | 270 | 9.82e-19 | 84.7 |
| MsG0580027357.01.T01 | AT2G39970 | 28.169 | 213 | 121 | 5 | 12 | 198 | 105 | 311 | 4.33e-22 | 93.6 |
| MsG0580027357.01.T01 | AT3G55640 | 27.753 | 227 | 144 | 6 | 6 | 217 | 14 | 235 | 2.06e-21 | 90.5 |
| MsG0580027357.01.T01 | AT3G55640 | 27.753 | 227 | 144 | 6 | 6 | 217 | 14 | 235 | 2.06e-21 | 90.5 |
| MsG0580027357.01.T01 | AT5G56450 | 28.796 | 191 | 128 | 4 | 19 | 208 | 142 | 325 | 5.65e-21 | 90.5 |
| MsG0580027357.01.T01 | AT3G55640 | 27.753 | 227 | 144 | 6 | 6 | 217 | 14 | 235 | 9.46e-21 | 90.1 |
| MsG0580027357.01.T01 | AT3G55640 | 31.053 | 190 | 121 | 5 | 21 | 208 | 144 | 325 | 1.65e-19 | 86.7 |
| MsG0580027357.01.T01 | AT3G55640 | 27.753 | 227 | 144 | 6 | 6 | 217 | 14 | 235 | 9.46e-21 | 90.1 |
| MsG0580027357.01.T01 | AT3G55640 | 31.053 | 190 | 121 | 5 | 21 | 208 | 144 | 325 | 1.65e-19 | 86.7 |
| MsG0580027357.01.T01 | AT4G26180 | 28.095 | 210 | 132 | 5 | 21 | 218 | 116 | 318 | 3.73e-20 | 88.2 |
| MsG0580027357.01.T01 | AT4G26180 | 28.934 | 197 | 122 | 6 | 21 | 206 | 20 | 209 | 1.71e-15 | 75.1 |
| MsG0580027357.01.T01 | AT3G53940 | 31.250 | 208 | 130 | 7 | 18 | 218 | 69 | 270 | 3.23e-19 | 85.1 |
| MsG0580027357.01.T01 | AT3G51870 | 26.531 | 196 | 125 | 5 | 14 | 208 | 183 | 360 | 1.12e-18 | 84.7 |
| MsG0580027357.01.T01 | AT3G51870 | 30.337 | 178 | 106 | 6 | 36 | 208 | 105 | 269 | 2.26e-13 | 69.3 |
| MsG0580027357.01.T01 | AT3G20240 | 32.597 | 181 | 110 | 6 | 23 | 202 | 164 | 333 | 1.78e-18 | 84.0 |
| MsG0580027357.01.T01 | AT4G32400 | 31.053 | 190 | 118 | 5 | 21 | 208 | 207 | 385 | 2.93e-18 | 83.6 |
| MsG0580027357.01.T01 | AT5G51050 | 30.622 | 209 | 126 | 7 | 5 | 208 | 301 | 495 | 6.62e-18 | 83.2 |
| MsG0580027357.01.T01 | AT5G48970 | 26.941 | 219 | 141 | 7 | 6 | 208 | 48 | 263 | 1.65e-17 | 80.1 |
| MsG0580027357.01.T01 | AT5G48970 | 28.477 | 151 | 99 | 4 | 61 | 208 | 1 | 145 | 1.79e-12 | 65.9 |
| MsG0580027357.01.T01 | AT5G48970 | 26.941 | 219 | 141 | 7 | 6 | 208 | 119 | 334 | 2.95e-17 | 80.5 |
| MsG0580027357.01.T01 | AT5G48970 | 29.557 | 203 | 121 | 6 | 22 | 208 | 20 | 216 | 9.19e-17 | 79.0 |
| MsG0580027357.01.T01 | AT5G01340 | 25.373 | 201 | 146 | 4 | 20 | 217 | 109 | 308 | 4.02e-17 | 79.7 |
| MsG0580027357.01.T01 | AT1G14560 | 27.064 | 218 | 136 | 7 | 19 | 220 | 22 | 232 | 4.44e-17 | 78.2 |
| MsG0580027357.01.T01 | AT4G39460 | 30.622 | 209 | 125 | 6 | 14 | 221 | 131 | 320 | 8.57e-17 | 79.0 |
| MsG0580027357.01.T01 | AT4G39460 | 30.622 | 209 | 125 | 6 | 14 | 221 | 131 | 320 | 8.57e-17 | 79.0 |
| MsG0580027357.01.T01 | AT4G39460 | 30.622 | 209 | 125 | 6 | 14 | 221 | 131 | 320 | 8.57e-17 | 79.0 |
| MsG0580027357.01.T01 | AT1G14560 | 27.064 | 218 | 136 | 7 | 19 | 220 | 120 | 330 | 1.40e-16 | 78.2 |
| MsG0580027357.01.T01 | AT5G61810 | 30.457 | 197 | 121 | 6 | 15 | 208 | 149 | 332 | 2.79e-16 | 77.4 |
| MsG0580027357.01.T01 | AT5G61810 | 30.303 | 198 | 122 | 6 | 15 | 209 | 292 | 476 | 4.11e-16 | 77.8 |
| MsG0580027357.01.T01 | AT3G21390 | 29.557 | 203 | 118 | 7 | 22 | 207 | 16 | 210 | 6.79e-16 | 76.6 |
| MsG0580027357.01.T01 | AT3G21390 | 24.651 | 215 | 142 | 6 | 6 | 203 | 114 | 325 | 5.37e-15 | 73.9 |
| MsG0580027357.01.T01 | AT3G21390 | 29.557 | 203 | 118 | 7 | 22 | 207 | 38 | 232 | 9.49e-16 | 76.3 |
| MsG0580027357.01.T01 | AT3G21390 | 24.651 | 215 | 142 | 6 | 6 | 203 | 136 | 347 | 8.62e-15 | 73.6 |
| MsG0580027357.01.T01 | AT5G07320 | 31.633 | 196 | 116 | 7 | 15 | 206 | 293 | 474 | 1.08e-15 | 76.6 |
| MsG0580027357.01.T01 | AT4G26180 | 28.934 | 197 | 122 | 6 | 21 | 206 | 20 | 209 | 1.09e-15 | 75.5 |
| MsG0580027357.01.T01 | AT4G26180 | 26.374 | 182 | 116 | 4 | 21 | 190 | 116 | 291 | 7.34e-14 | 70.1 |
| MsG0580027357.01.T01 | AT2G33820 | 27.174 | 184 | 130 | 3 | 23 | 204 | 19 | 200 | 5.38e-15 | 73.6 |
| MsG0580027357.01.T01 | AT5G01500 | 25.128 | 195 | 127 | 5 | 15 | 208 | 212 | 388 | 8.73e-15 | 73.9 |
| MsG0580027357.01.T01 | AT5G01500 | 29.050 | 179 | 107 | 5 | 36 | 208 | 133 | 297 | 3.00e-13 | 69.3 |
| MsG0580027357.01.T01 | AT2G33820 | 25.943 | 212 | 149 | 4 | 23 | 232 | 19 | 224 | 9.00e-15 | 72.4 |
| MsG0580027357.01.T01 | AT1G34065 | 28.500 | 200 | 121 | 5 | 14 | 209 | 148 | 329 | 9.52e-15 | 73.2 |
| MsG0580027357.01.T01 | AT1G34065 | 28.500 | 200 | 121 | 5 | 14 | 209 | 155 | 336 | 1.01e-14 | 73.2 |
| MsG0580027357.01.T01 | AT1G07030 | 28.351 | 194 | 122 | 6 | 22 | 213 | 40 | 218 | 2.97e-14 | 71.6 |
| MsG0580027357.01.T01 | AT2G26360 | 28.500 | 200 | 116 | 7 | 19 | 212 | 108 | 286 | 1.05e-13 | 70.5 |
| MsG0580027357.01.T01 | AT5G58970 | 27.638 | 199 | 122 | 5 | 21 | 212 | 119 | 302 | 2.59e-13 | 68.9 |
| MsG0580027357.01.T01 | AT5G58970 | 23.980 | 196 | 141 | 3 | 15 | 204 | 9 | 202 | 7.91e-12 | 64.7 |
| MsG0580027357.01.T01 | AT1G14140 | 26.415 | 159 | 105 | 4 | 45 | 202 | 147 | 294 | 3.08e-13 | 68.6 |
| MsG0580027357.01.T01 | AT1G14140 | 26.582 | 158 | 111 | 4 | 36 | 189 | 30 | 186 | 6.00e-12 | 64.7 |
| MsG0580027357.01.T01 | AT5G15640 | 29.744 | 195 | 121 | 6 | 23 | 208 | 29 | 216 | 4.39e-13 | 68.2 |
| MsG0580027357.01.T01 | AT5G15640 | 29.744 | 195 | 121 | 6 | 23 | 208 | 22 | 209 | 5.93e-13 | 67.8 |
| MsG0580027357.01.T01 | AT1G74240 | 28.365 | 208 | 109 | 7 | 26 | 204 | 88 | 284 | 8.96e-13 | 67.4 |
| MsG0580027357.01.T01 | AT1G74240 | 27.869 | 183 | 112 | 4 | 37 | 202 | 3 | 182 | 5.68e-11 | 62.0 |
| MsG0580027357.01.T01 | AT1G74240 | 28.365 | 208 | 109 | 7 | 26 | 204 | 136 | 332 | 9.66e-13 | 67.4 |
| MsG0580027357.01.T01 | AT1G74240 | 28.000 | 200 | 119 | 5 | 20 | 202 | 39 | 230 | 1.74e-11 | 63.9 |
| MsG0580027357.01.T01 | AT2G30160 | 27.041 | 196 | 126 | 6 | 22 | 215 | 42 | 222 | 9.87e-13 | 67.4 |
| MsG0580027357.01.T01 | AT4G03115 | 29.730 | 185 | 113 | 7 | 21 | 202 | 62 | 232 | 1.93e-12 | 65.5 |
| MsG0580027357.01.T01 | AT4G03115 | 29.730 | 185 | 113 | 7 | 21 | 202 | 165 | 335 | 2.09e-12 | 66.6 |
| MsG0580027357.01.T01 | AT4G03115 | 29.730 | 185 | 113 | 7 | 21 | 202 | 70 | 240 | 2.16e-12 | 65.5 |
| MsG0580027357.01.T01 | AT4G03115 | 29.730 | 185 | 113 | 7 | 21 | 202 | 133 | 303 | 2.24e-12 | 66.2 |
| MsG0580027357.01.T01 | AT2G33820 | 26.042 | 192 | 130 | 4 | 23 | 204 | 19 | 208 | 2.33e-12 | 66.2 |
| MsG0580027357.01.T01 | AT3G54110 | 26.904 | 197 | 117 | 6 | 22 | 208 | 118 | 297 | 6.33e-12 | 64.7 |
| MsG0580027357.01.T01 | AT3G54110 | 25.616 | 203 | 140 | 6 | 9 | 204 | 2 | 200 | 1.60e-11 | 63.5 |
| MsG0580027357.01.T01 | AT2G22500 | 29.379 | 177 | 114 | 5 | 37 | 208 | 138 | 308 | 8.46e-12 | 64.3 |
| MsG0580027357.01.T01 | AT5G58970 | 23.980 | 196 | 141 | 3 | 15 | 204 | 9 | 202 | 8.67e-12 | 63.9 |
| MsG0580027357.01.T01 | AT5G14040 | 27.523 | 218 | 120 | 8 | 18 | 225 | 82 | 271 | 1.17e-11 | 64.3 |
| MsG0580027357.01.T01 | AT5G42130 | 28.161 | 174 | 108 | 5 | 32 | 204 | 128 | 285 | 1.26e-11 | 64.3 |
| MsG0580027357.01.T01 | AT4G11440 | 27.536 | 207 | 124 | 7 | 23 | 218 | 420 | 611 | 2.63e-11 | 63.9 |
| MsG0580027357.01.T01 | AT4G11440 | 27.536 | 207 | 124 | 7 | 23 | 218 | 420 | 611 | 2.63e-11 | 63.9 |
| MsG0580027357.01.T01 | AT1G72820 | 29.688 | 192 | 93 | 8 | 38 | 208 | 47 | 217 | 4.96e-11 | 62.4 |
| MsG0580027357.01.T01 | AT1G72820 | 29.688 | 192 | 93 | 8 | 38 | 208 | 47 | 217 | 4.96e-11 | 62.4 |
| MsG0580027357.01.T01 | AT5G64970 | 27.778 | 162 | 93 | 5 | 61 | 204 | 139 | 294 | 6.44e-11 | 62.0 |
| MsG0580027357.01.T01 | AT2G17270 | 26.961 | 204 | 125 | 7 | 16 | 216 | 20 | 202 | 6.50e-11 | 62.0 |
Find 55 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTCACTGGCTTCTGGTTT+GGG | 0.224008 | 5:+59001843 | None:intergenic |
| AATGTCACTGGCTTCTGGTT+TGG | 0.260255 | 5:+59001842 | None:intergenic |
| GCTTCTGGTTTGGGTTTGTT+AGG | 0.271427 | 5:+59001852 | None:intergenic |
| GTTTCATAAGGAAGGCATTA+AGG | 0.275093 | 5:-59001991 | MsG0580027357.01.T01:CDS |
| CTTGGCCTTGCTCTTGCAGC+CGG | 0.278684 | 5:+59002069 | None:intergenic |
| TGCAACGAACTCACAACTAT+TGG | 0.353973 | 5:-59003357 | MsG0580027357.01.T01:CDS |
| ATATCAATGTCACTGGCTTC+TGG | 0.355132 | 5:+59001837 | None:intergenic |
| ATTATAGCTGCTGCTGGAGC+TGG | 0.390966 | 5:-59003330 | MsG0580027357.01.T01:CDS |
| CCTGTGTATCATCTCATAAC+TGG | 0.398805 | 5:+59001905 | None:intergenic |
| TTTCATAAGGAAGGCATTAA+GGG | 0.417815 | 5:-59001990 | MsG0580027357.01.T01:CDS |
| TTGGCCTTGCTCTTGCAGCC+GGG | 0.432276 | 5:+59002070 | None:intergenic |
| GGAAATATTATAGCTGCTGC+TGG | 0.450132 | 5:-59003336 | MsG0580027357.01.T01:CDS |
| TTATAGCTGCTGCTGGAGCT+GGG | 0.465258 | 5:-59003329 | MsG0580027357.01.T01:CDS |
| CTCTTGTAAGGAACAACATT+AGG | 0.476848 | 5:+59002898 | None:intergenic |
| CACACGAGGTAATACGTTCC+CGG | 0.478467 | 5:-59002088 | MsG0580027357.01.T01:CDS |
| TTGTCTTAACAACCCACAAT+GGG | 0.489947 | 5:+59003283 | None:intergenic |
| ACTGTCGACAAGCTAAATCC+TGG | 0.492266 | 5:-59002167 | MsG0580027357.01.T01:CDS |
| AAGGCCTACGAGGACTGTAT+AGG | 0.494032 | 5:-59002840 | MsG0580027357.01.T01:intron |
| TACTAAGAAGGTGTTTCATA+AGG | 0.495392 | 5:-59002003 | MsG0580027357.01.T01:CDS |
| GCGGAGAGAACACTCTTGTA+AGG | 0.497253 | 5:+59002886 | None:intergenic |
| TGAATCAATGTCTTGTTAGC+TGG | 0.502676 | 5:+59001745 | None:intergenic |
| CAATATCTACAAACCCATTG+TGG | 0.505571 | 5:-59003296 | MsG0580027357.01.T01:CDS |
| GGAATCTTGTTAGATTGAGA+TGG | 0.506838 | 5:+59001783 | None:intergenic |
| TCTATTAAGAACAACTCCTT+CGG | 0.518646 | 5:-59001943 | MsG0580027357.01.T01:CDS |
| AATATCTACAAACCCATTGT+GGG | 0.534468 | 5:-59003295 | MsG0580027357.01.T01:CDS |
| TATAGCTGCTGCTGGAGCTG+GGG | 0.537127 | 5:-59003328 | MsG0580027357.01.T01:CDS |
| GATGCGATTGCAACACTCCC+AGG | 0.543278 | 5:+59002149 | None:intergenic |
| AAGAAGGTGTTTCATAAGGA+AGG | 0.559222 | 5:-59001999 | MsG0580027357.01.T01:CDS |
| GTGTTCTCTCCGCTTTGACA+AGG | 0.562031 | 5:-59002876 | MsG0580027357.01.T01:CDS |
| CAATCTAACAAGATTCCTCT+CGG | 0.562316 | 5:-59001777 | MsG0580027357.01.T01:CDS |
| CGTTCCCGGCTGCAAGAGCA+AGG | 0.565066 | 5:-59002074 | MsG0580027357.01.T01:CDS |
| GTTGGTAATACTGTCGCAGA+GGG | 0.577306 | 5:-59003381 | MsG0580027357.01.T01:CDS |
| TGTTATTGACTGTACTAAGA+AGG | 0.578224 | 5:-59002015 | MsG0580027357.01.T01:CDS |
| TGACTTACGCCAGCTAATGA+AGG | 0.581206 | 5:+59002344 | None:intergenic |
| ATAGCTGCTGCTGGAGCTGG+GGG | 0.581342 | 5:-59003327 | MsG0580027357.01.T01:CDS |
| CTTGTCTTAACAACCCACAA+TGG | 0.581815 | 5:+59003282 | None:intergenic |
| AGTAGTGGAGTTCAATATGC+CGG | 0.586236 | 5:-59002038 | MsG0580027357.01.T01:CDS |
| ACAAGGATTACTCATGAGGA+AGG | 0.586525 | 5:-59002859 | MsG0580027357.01.T01:CDS |
| TGAAAAGATAAAGTTGTACA+TGG | 0.597783 | 5:-59002297 | MsG0580027357.01.T01:CDS |
| AGCTGGTCTTTGTTTCCGAG+AGG | 0.606604 | 5:+59001762 | None:intergenic |
| ATCTTGTTAGATTGAGATGG+TGG | 0.607574 | 5:+59001786 | None:intergenic |
| CTGTCGACAAGCTAAATCCT+GGG | 0.608788 | 5:-59002166 | MsG0580027357.01.T01:CDS |
| TTTGACAAGGATTACTCATG+AGG | 0.611557 | 5:-59002863 | MsG0580027357.01.T01:CDS |
| ATGAGTAATCCTTGTCAAAG+CGG | 0.629314 | 5:+59002867 | None:intergenic |
| CCAGTTATGAGATGATACAC+AGG | 0.633814 | 5:-59001905 | MsG0580027357.01.T01:CDS |
| CGGGAACGTATTACCTCGTG+TGG | 0.635476 | 5:+59002089 | None:intergenic |
| CCCATCAGACACAAGGCATG+AGG | 0.639624 | 5:-59002921 | MsG0580027357.01.T01:intron |
| CATACCTATACAGTCCTCGT+AGG | 0.652752 | 5:+59002836 | None:intergenic |
| TGTTGGTAATACTGTCGCAG+AGG | 0.657363 | 5:-59003382 | MsG0580027357.01.T01:CDS |
| TCTGAAACCCATCAGACACA+AGG | 0.662362 | 5:-59002928 | MsG0580027357.01.T01:intron |
| CTTAGTACAGTCAATAACAC+CGG | 0.662618 | 5:+59002019 | None:intergenic |
| GTGAATGTAATAACAGCCGA+AGG | 0.680872 | 5:+59001927 | None:intergenic |
| ACTCATGAGGAAGGCCTACG+AGG | 0.694705 | 5:-59002850 | MsG0580027357.01.T01:CDS |
| TGTAATGACTTATCCACACG+AGG | 0.714354 | 5:-59002102 | MsG0580027357.01.T01:CDS |
| GTGTGGATAAGTCATTACAG+AGG | 0.756308 | 5:+59002106 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGATTAACCATAAATTA+GGG | + | Chr5:59002342-59002361 | None:intergenic | 15.0% |
| !! | AATTAATATCTAACATAACA+AGG | + | Chr5:59002183-59002202 | None:intergenic | 15.0% |
| !! | ATAATCTTCCATATATTTAT+TGG | - | Chr5:59001999-59002018 | MsG0580027357.01.T01:CDS | 15.0% |
| !! | ATTAATATCTAACATAACAA+GGG | + | Chr5:59002182-59002201 | None:intergenic | 15.0% |
| !!! | ATTTCTTTTTTCATAATGTA+AGG | + | Chr5:59002430-59002449 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTTAACTTGTATT+TGG | - | Chr5:59002070-59002089 | MsG0580027357.01.T01:CDS | 15.0% |
| !!! | TTAAATTTAACTGATTAGTT+TGG | + | Chr5:59002037-59002056 | None:intergenic | 15.0% |
| !! | CAAATGATTAACCATAAATT+AGG | + | Chr5:59002343-59002362 | None:intergenic | 20.0% |
| !! | GTATTCTGTATTAAAATAGA+CGG | - | Chr5:59002616-59002635 | MsG0580027357.01.T01:intron | 20.0% |
| ! | AGTGACATTGATATGAAAAA+TGG | - | Chr5:59003314-59003333 | MsG0580027357.01.T01:CDS | 25.0% |
| ! | CAAATGCACCAATAAATATA+TGG | + | Chr5:59002010-59002029 | None:intergenic | 25.0% |
| ! | GGTAAAATATGTGTGAAAAT+AGG | - | Chr5:59001921-59001940 | MsG0580027357.01.T01:CDS | 25.0% |
| ! | TGAAAAGATAAAGTTGTACA+TGG | - | Chr5:59002845-59002864 | MsG0580027357.01.T01:CDS | 25.0% |
| ! | TTATATTGTCAGTCCAAATT+TGG | + | Chr5:59002562-59002581 | None:intergenic | 25.0% |
| !! | AACTTTATCTTTTCATATGC+TGG | + | Chr5:59002840-59002859 | None:intergenic | 25.0% |
| !! | ACTTTATCTTTTCATATGCT+GGG | + | Chr5:59002839-59002858 | None:intergenic | 25.0% |
| !! | ATATGAAAAATGGTGATGAT+AGG | - | Chr5:59003324-59003343 | MsG0580027357.01.T01:CDS | 25.0% |
| !! | ATTTTTCATATCAATGTCAC+TGG | + | Chr5:59003315-59003334 | None:intergenic | 25.0% |
| !! | TATGAAAAATGGTGATGATA+GGG | - | Chr5:59003325-59003344 | MsG0580027357.01.T01:CDS | 25.0% |
| !!! | CGTTATTTTTCTGAAATGAT+TGG | + | Chr5:59002481-59002500 | None:intergenic | 25.0% |
| !!! | TTTCTGAAATGATTGGATAA+AGG | + | Chr5:59002474-59002493 | None:intergenic | 25.0% |
| !!! | TTTTCTAGTTCCCTAATTTA+TGG | - | Chr5:59002329-59002348 | MsG0580027357.01.T01:CDS | 25.0% |
| AAGTTGTACATGGCAAAAAA+AGG | - | Chr5:59002855-59002874 | MsG0580027357.01.T01:CDS | 30.0% | |
| AATATCTACAAACCCATTGT+GGG | - | Chr5:59001847-59001866 | MsG0580027357.01.T01:CDS | 30.0% | |
| AGTACAGAACTTATTCAATG+AGG | - | Chr5:59002928-59002947 | MsG0580027357.01.T01:intron | 30.0% | |
| ATAATGAAACCTCTTTAGAC+TGG | - | Chr5:59002586-59002605 | MsG0580027357.01.T01:intron | 30.0% | |
| ATCGTCATTAAAACAGAAAG+AGG | + | Chr5:59002104-59002123 | None:intergenic | 30.0% | |
| GTCAGCGATATAAATAACAA+TGG | - | Chr5:59002530-59002549 | MsG0580027357.01.T01:intron | 30.0% | |
| TATTATATTCCTTGATGCAG+TGG | - | Chr5:59002768-59002787 | MsG0580027357.01.T01:intron | 30.0% | |
| TCTATTAAGAACAACTCCTT+CGG | - | Chr5:59003199-59003218 | MsG0580027357.01.T01:intron | 30.0% | |
| ! | ACAGAAACCAGATTATTTTC+TGG | - | Chr5:59002678-59002697 | MsG0580027357.01.T01:intron | 30.0% |
| ! | ATGAAAAATGGTGATGATAG+GGG | - | Chr5:59003326-59003345 | MsG0580027357.01.T01:CDS | 30.0% |
| ! | TGTTATTGACTGTACTAAGA+AGG | - | Chr5:59003127-59003146 | MsG0580027357.01.T01:intron | 30.0% |
| !! | TACTAAGAAGGTGTTTCATA+AGG | - | Chr5:59003139-59003158 | MsG0580027357.01.T01:intron | 30.0% |
| !! | TTTCATAAGGAAGGCATTAA+GGG | - | Chr5:59003152-59003171 | MsG0580027357.01.T01:intron | 30.0% |
| ATCTCTTTCCCAATGAATAG+TGG | - | Chr5:59002385-59002404 | MsG0580027357.01.T01:intron | 35.0% | |
| ATCTTGTTAGATTGAGATGG+TGG | + | Chr5:59003359-59003378 | None:intergenic | 35.0% | |
| ATGAGTAATCCTTGTCAAAG+CGG | + | Chr5:59002278-59002297 | None:intergenic | 35.0% | |
| CAATATCTACAAACCCATTG+TGG | - | Chr5:59001846-59001865 | MsG0580027357.01.T01:CDS | 35.0% | |
| CAATCTAACAAGATTCCTCT+CGG | - | Chr5:59003365-59003384 | MsG0580027357.01.T01:CDS | 35.0% | |
| CTCTTGTAAGGAACAACATT+AGG | + | Chr5:59002247-59002266 | None:intergenic | 35.0% | |
| CTTAGTACAGTCAATAACAC+CGG | + | Chr5:59003126-59003145 | None:intergenic | 35.0% | |
| GACATCACCTTGTGAAAAAA+AGG | + | Chr5:59002513-59002532 | None:intergenic | 35.0% | |
| GCTTCTCATGCATTTAATCT+TGG | - | Chr5:59001900-59001919 | MsG0580027357.01.T01:CDS | 35.0% | |
| GGAAGATTATGAGACATCAA+CGG | + | Chr5:59001989-59002008 | None:intergenic | 35.0% | |
| GGAATCTTGTTAGATTGAGA+TGG | + | Chr5:59003362-59003381 | None:intergenic | 35.0% | |
| TAGCTGTCCAGAAAATAATC+TGG | + | Chr5:59002688-59002707 | None:intergenic | 35.0% | |
| TTGTCTTAACAACCCACAAT+GGG | + | Chr5:59001862-59001881 | None:intergenic | 35.0% | |
| TTTGACAAGGATTACTCATG+AGG | - | Chr5:59002279-59002298 | MsG0580027357.01.T01:intron | 35.0% | |
| ! | AACATAACAAGGGCATGTAT+AGG | + | Chr5:59002172-59002191 | None:intergenic | 35.0% |
| ! | ACAATGGTTGATGCCAAATT+TGG | - | Chr5:59002546-59002565 | MsG0580027357.01.T01:intron | 35.0% |
| ! | ACATTTTCTCCAGTCTAAAG+AGG | + | Chr5:59002598-59002617 | None:intergenic | 35.0% |
| ! | ACCTTGTGAAAAAAAGGCAT+GGG | + | Chr5:59002507-59002526 | None:intergenic | 35.0% |
| ! | TCTGGTTTCTGTATTGAACT+TGG | + | Chr5:59002670-59002689 | None:intergenic | 35.0% |
| ! | TGAAAAATGGTGATGATAGG+GGG | - | Chr5:59003327-59003346 | MsG0580027357.01.T01:CDS | 35.0% |
| !! | AAGAAGGTGTTTCATAAGGA+AGG | - | Chr5:59003143-59003162 | MsG0580027357.01.T01:intron | 35.0% |
| !! | GTTTCATAAGGAAGGCATTA+AGG | - | Chr5:59003151-59003170 | MsG0580027357.01.T01:intron | 35.0% |
| ACAAGGATTACTCATGAGGA+AGG | - | Chr5:59002283-59002302 | MsG0580027357.01.T01:intron | 40.0% | |
| ATCTGCTGTCCACTATTCAT+TGG | + | Chr5:59002397-59002416 | None:intergenic | 40.0% | |
| CACCTTGTGAAAAAAAGGCA+TGG | + | Chr5:59002508-59002527 | None:intergenic | 40.0% | |
| CCAGTTATGAGATGATACAC+AGG | - | Chr5:59003237-59003256 | MsG0580027357.01.T01:intron | 40.0% | |
| CCTGTGTATCATCTCATAAC+TGG | + | Chr5:59003240-59003259 | None:intergenic | 40.0% | |
| CTTGTCTTAACAACCCACAA+TGG | + | Chr5:59001863-59001882 | None:intergenic | 40.0% | |
| GGAAATATTATAGCTGCTGC+TGG | - | Chr5:59001806-59001825 | MsG0580027357.01.T01:CDS | 40.0% | |
| GTGAATGTAATAACAGCCGA+AGG | + | Chr5:59003218-59003237 | None:intergenic | 40.0% | |
| GTGTGGATAAGTCATTACAG+AGG | + | Chr5:59003039-59003058 | None:intergenic | 40.0% | |
| TATGAGACATCAACGGTGAA+AGG | + | Chr5:59001982-59002001 | None:intergenic | 40.0% | |
| TCTGCTGTCCACTATTCATT+GGG | + | Chr5:59002396-59002415 | None:intergenic | 40.0% | |
| TGCAACGAACTCACAACTAT+TGG | - | Chr5:59001785-59001804 | MsG0580027357.01.T01:CDS | 40.0% | |
| TGTAATGACTTATCCACACG+AGG | - | Chr5:59003040-59003059 | MsG0580027357.01.T01:intron | 40.0% | |
| ! | AGTAGTGGAGTTCAATATGC+CGG | - | Chr5:59003104-59003123 | MsG0580027357.01.T01:intron | 40.0% |
| ! | GAAAAATGGTGATGATAGGG+GGG | - | Chr5:59003328-59003347 | MsG0580027357.01.T01:CDS | 40.0% |
| ! | GGCATTAAGGGATTTTATCG+CGG | - | Chr5:59003164-59003183 | MsG0580027357.01.T01:intron | 40.0% |
| ! | GGTATTTTGCCTTCATTAGC+TGG | - | Chr5:59002789-59002808 | MsG0580027357.01.T01:intron | 40.0% |
| !! | ATATCAATGTCACTGGCTTC+TGG | + | Chr5:59003308-59003327 | None:intergenic | 40.0% |
| !! | CTCCACTACTATTTTTCGCT+TGG | + | Chr5:59003094-59003113 | None:intergenic | 40.0% |
| !!! | ACCCATGCCTTTTTTTCACA+AGG | - | Chr5:59002503-59002522 | MsG0580027357.01.T01:intron | 40.0% |
| !!! | GGTTTGTTAGGCTCATTTTG+TGG | + | Chr5:59003281-59003300 | None:intergenic | 40.0% |
| ACTGTCGACAAGCTAAATCC+TGG | - | Chr5:59002975-59002994 | MsG0580027357.01.T01:intron | 45.0% | |
| CATACCTATACAGTCCTCGT+AGG | + | Chr5:59002309-59002328 | None:intergenic | 45.0% | |
| CTGTCGACAAGCTAAATCCT+GGG | - | Chr5:59002976-59002995 | MsG0580027357.01.T01:intron | 45.0% | |
| GGCAAAATACCACTGCATCA+AGG | + | Chr5:59002780-59002799 | None:intergenic | 45.0% | |
| GGCCAAGCGAAAAATAGTAG+TGG | - | Chr5:59003089-59003108 | MsG0580027357.01.T01:intron | 45.0% | |
| TGACTTACGCCAGCTAATGA+AGG | + | Chr5:59002801-59002820 | None:intergenic | 45.0% | |
| ! | TCTGAAACCCATCAGACACA+AGG | - | Chr5:59002214-59002233 | MsG0580027357.01.T01:intron | 45.0% |
| !! | AATGTCACTGGCTTCTGGTT+TGG | + | Chr5:59003303-59003322 | None:intergenic | 45.0% |
| !! | ATGTCACTGGCTTCTGGTTT+GGG | + | Chr5:59003302-59003321 | None:intergenic | 45.0% |
| !! | GCTTCTGGTTTGGGTTTGTT+AGG | + | Chr5:59003293-59003312 | None:intergenic | 45.0% |
| !! | GTTGGTAATACTGTCGCAGA+GGG | - | Chr5:59001761-59001780 | MsG0580027357.01.T01:CDS | 45.0% |
| !! | TGTTGGTAATACTGTCGCAG+AGG | - | Chr5:59001760-59001779 | MsG0580027357.01.T01:CDS | 45.0% |
| AAGGCCTACGAGGACTGTAT+AGG | - | Chr5:59002302-59002321 | MsG0580027357.01.T01:CDS | 50.0% | |
| ATTATAGCTGCTGCTGGAGC+TGG | - | Chr5:59001812-59001831 | MsG0580027357.01.T01:CDS | 50.0% | |
| CACACGAGGTAATACGTTCC+CGG | - | Chr5:59003054-59003073 | MsG0580027357.01.T01:intron | 50.0% | |
| CCTCATGCCTTGTGTCTGAT+GGG | + | Chr5:59002224-59002243 | None:intergenic | 50.0% | |
| GCGGAGAGAACACTCTTGTA+AGG | + | Chr5:59002259-59002278 | None:intergenic | 50.0% | |
| GTGTTCTCTCCGCTTTGACA+AGG | - | Chr5:59002266-59002285 | MsG0580027357.01.T01:intron | 50.0% | |
| TTATAGCTGCTGCTGGAGCT+GGG | - | Chr5:59001813-59001832 | MsG0580027357.01.T01:CDS | 50.0% | |
| !! | AGCTGGTCTTTGTTTCCGAG+AGG | + | Chr5:59003383-59003402 | None:intergenic | 50.0% |
| ACTCATGAGGAAGGCCTACG+AGG | - | Chr5:59002292-59002311 | MsG0580027357.01.T01:CDS | 55.0% | |
| CCCATCAGACACAAGGCATG+AGG | - | Chr5:59002221-59002240 | MsG0580027357.01.T01:intron | 55.0% | |
| CGGGAACGTATTACCTCGTG+TGG | + | Chr5:59003056-59003075 | None:intergenic | 55.0% | |
| GATGCGATTGCAACACTCCC+AGG | + | Chr5:59002996-59003015 | None:intergenic | 55.0% | |
| GCCTCATGCCTTGTGTCTGA+TGG | + | Chr5:59002225-59002244 | None:intergenic | 55.0% | |
| TATAGCTGCTGCTGGAGCTG+GGG | - | Chr5:59001814-59001833 | MsG0580027357.01.T01:CDS | 55.0% | |
| ATAGCTGCTGCTGGAGCTGG+GGG | - | Chr5:59001815-59001834 | MsG0580027357.01.T01:CDS | 60.0% | |
| !! | CTTGGCCTTGCTCTTGCAGC+CGG | + | Chr5:59003076-59003095 | None:intergenic | 60.0% |
| !! | TTGGCCTTGCTCTTGCAGCC+GGG | + | Chr5:59003075-59003094 | None:intergenic | 60.0% |
| CGTTCCCGGCTGCAAGAGCA+AGG | - | Chr5:59003068-59003087 | MsG0580027357.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 59001749 | 59003415 | 59001749 | ID=MsG0580027357.01;Name=MsG0580027357.01 |
| Chr5 | mRNA | 59001749 | 59003415 | 59001749 | ID=MsG0580027357.01.T01;Parent=MsG0580027357.01;Name=MsG0580027357.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0|0|1|1|1|4|0|257 |
| Chr5 | exon | 59003275 | 59003415 | 59003275 | ID=MsG0580027357.01.T01:exon:22052;Parent=MsG0580027357.01.T01 |
| Chr5 | exon | 59002841 | 59002935 | 59002841 | ID=MsG0580027357.01.T01:exon:22051;Parent=MsG0580027357.01.T01 |
| Chr5 | exon | 59002288 | 59002376 | 59002288 | ID=MsG0580027357.01.T01:exon:22050;Parent=MsG0580027357.01.T01 |
| Chr5 | exon | 59001749 | 59002197 | 59001749 | ID=MsG0580027357.01.T01:exon:22049;Parent=MsG0580027357.01.T01 |
| Chr5 | CDS | 59003275 | 59003415 | 59003275 | ID=MsG0580027357.01.T01:cds;Parent=MsG0580027357.01.T01 |
| Chr5 | CDS | 59002841 | 59002935 | 59002841 | ID=MsG0580027357.01.T01:cds;Parent=MsG0580027357.01.T01 |
| Chr5 | CDS | 59002288 | 59002376 | 59002288 | ID=MsG0580027357.01.T01:cds;Parent=MsG0580027357.01.T01 |
| Chr5 | CDS | 59001749 | 59002197 | 59001749 | ID=MsG0580027357.01.T01:cds;Parent=MsG0580027357.01.T01 |
| Gene Sequence |
| Protein sequence |
