AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027438.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027438.01.T01 MTR_5g058090 71.942 139 39 0 28 166 23 161 3.73e-64 211
MsG0580027438.01.T01 MTR_8g014980 48.214 112 56 2 43 154 14 123 3.73e-28 104
MsG0580027438.01.T01 MTR_8g015040 46.218 119 62 2 39 157 54 170 9.50e-28 108
MsG0580027438.01.T01 MTR_8g015010 48.276 116 58 2 39 154 46 159 1.83e-27 108
MsG0580027438.01.T01 MTR_8g015100 46.610 118 61 2 40 157 52 167 4.60e-27 107
MsG0580027438.01.T01 MTR_2g100470 42.857 126 65 3 43 166 14 134 3.88e-25 101
MsG0580027438.01.T01 MTR_2g100450 40.602 133 72 3 36 166 21 148 4.60e-25 101
MsG0580027438.01.T01 MTR_2g100450 40.602 133 72 3 36 166 21 148 5.74e-25 100
MsG0580027438.01.T01 MTR_8g014790 39.535 129 68 4 40 166 27 147 2.02e-21 90.9
MsG0580027438.01.T01 MTR_8g015340 38.889 126 66 4 43 166 43 159 3.07e-21 90.1
MsG0580027438.01.T01 MTR_8g015150 40.323 124 64 4 37 158 17 132 3.59e-21 90.1
MsG0580027438.01.T01 MTR_8g015150 40.323 124 64 4 37 158 17 132 3.76e-21 90.1
MsG0580027438.01.T01 MTR_8g015150 40.323 124 64 4 37 158 17 132 3.81e-21 90.1
MsG0580027438.01.T01 MTR_6g090605 41.667 120 66 3 43 160 37 154 1.48e-20 87.4
MsG0580027438.01.T01 MTR_8g014930 40.650 123 62 4 40 160 30 143 2.79e-20 87.4
MsG0580027438.01.T01 MTR_8g014930 40.650 123 62 4 40 160 30 143 2.92e-20 87.4
MsG0580027438.01.T01 MTR_8g014930 40.650 123 62 4 40 160 30 143 3.12e-20 87.4
MsG0580027438.01.T01 MTR_8g014930 40.650 123 62 4 40 160 25 138 3.36e-20 87.4
MsG0580027438.01.T01 MTR_8g014700 37.121 132 73 4 40 169 30 153 4.01e-20 87.0
MsG0580027438.01.T01 MTR_8g014700 37.984 129 70 4 40 166 30 150 4.02e-20 87.0
MsG0580027438.01.T01 MTR_8g014700 37.984 129 70 4 40 166 30 150 4.41e-20 87.0
MsG0580027438.01.T01 MTR_8g461120 39.669 121 64 3 40 158 38 151 5.73e-20 86.7
MsG0580027438.01.T01 MTR_8g461120 39.669 121 64 3 40 158 38 151 5.98e-20 86.7
MsG0580027438.01.T01 MTR_8g461120 39.669 121 64 3 40 158 38 151 6.13e-20 86.7
MsG0580027438.01.T01 MTR_6g090615 40.496 121 66 4 43 160 28 145 2.50e-19 84.7
MsG0580027438.01.T01 MTR_8g015200 39.831 118 62 4 45 160 11 121 4.91e-19 84.0
MsG0580027438.01.T01 MTR_8g014760 35.821 134 70 4 40 169 30 151 6.87e-19 83.2
MsG0580027438.01.T01 MTR_8g014760 35.821 134 70 4 40 169 30 151 7.46e-19 83.2
MsG0580027438.01.T01 MTR_8g028110 37.190 121 65 3 40 158 30 141 7.84e-19 83.2
MsG0580027438.01.T01 MTR_8g014760 35.821 134 70 4 40 169 30 151 8.04e-19 83.2
MsG0580027438.01.T01 MTR_8g014760 36.641 131 67 4 40 166 26 144 9.49e-19 83.2
MsG0580027438.01.T01 MTR_8g014690 37.500 120 65 3 40 157 32 143 1.62e-18 82.4
MsG0580027438.01.T01 MTR_8g014690 37.500 120 65 3 40 157 25 136 2.05e-18 82.0
MsG0580027438.01.T01 MTR_8g015190 36.434 129 71 4 40 166 47 166 2.62e-18 81.6
MsG0580027438.01.T01 MTR_8g015190 36.434 129 71 4 40 166 37 156 3.08e-18 81.6
MsG0580027438.01.T01 MTR_8g014730 34.815 135 72 4 40 169 30 153 2.84e-16 75.9
MsG0580027438.01.T01 MTR_7g100630 33.835 133 76 5 43 174 32 153 6.76e-15 72.0
MsG0580027438.01.T01 MTR_1g066950 32.824 131 76 5 42 171 25 144 9.81e-15 71.6
MsG0580027438.01.T01 MTR_6g071455 40.179 112 51 4 45 154 27 124 1.29e-13 68.2
MsG0580027438.01.T01 MTR_6g071455 40.179 112 51 4 45 154 27 124 1.45e-13 68.2
MsG0580027438.01.T01 MTR_1g009840 82.051 39 5 1 6 42 175 213 1.85e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027438.01.T01 AT2G19210 40.411 146 73 3 37 172 24 165 3.31e-30 115
MsG0580027438.01.T01 AT4G29990 43.411 129 67 3 40 166 23 147 1.90e-29 114
MsG0580027438.01.T01 AT4G29990 43.411 129 67 3 40 166 23 147 2.40e-29 113
MsG0580027438.01.T01 AT2G19230 39.860 143 72 3 40 172 26 164 5.25e-29 112
MsG0580027438.01.T01 AT2G19230 39.860 143 72 3 40 172 26 164 6.12e-29 112
MsG0580027438.01.T01 AT1G05700 44.361 133 63 4 40 170 27 150 8.38e-29 112
MsG0580027438.01.T01 AT1G05700 44.361 133 63 4 40 170 27 150 8.68e-29 112
MsG0580027438.01.T01 AT2G19190 41.085 129 70 3 40 166 26 150 7.76e-26 103
MsG0580027438.01.T01 AT3G46350 41.803 122 60 4 40 157 26 140 3.16e-23 95.5
MsG0580027438.01.T01 AT2G14510 45.378 119 57 4 43 159 28 140 2.82e-22 93.2
MsG0580027438.01.T01 AT2G14510 45.378 119 57 4 43 159 36 148 2.96e-22 93.2
MsG0580027438.01.T01 AT4G29450 39.024 123 72 2 40 160 23 144 3.22e-22 93.2
MsG0580027438.01.T01 AT1G51910 43.590 117 56 4 43 156 28 137 9.88e-22 91.7
MsG0580027438.01.T01 AT1G51890 36.806 144 73 6 40 172 21 157 1.03e-20 89.0
MsG0580027438.01.T01 AT1G51890 36.806 144 73 6 40 172 21 157 1.05e-20 89.0
MsG0580027438.01.T01 AT2G28960 45.833 120 54 5 40 156 28 139 1.11e-20 88.6
MsG0580027438.01.T01 AT1G51890 36.806 144 73 6 40 172 21 157 1.11e-20 88.6
MsG0580027438.01.T01 AT1G51880 36.508 126 70 4 34 156 19 137 1.23e-20 88.6
MsG0580027438.01.T01 AT1G51880 36.508 126 70 4 34 156 37 155 1.30e-20 88.6
MsG0580027438.01.T01 AT1G51880 36.508 126 70 4 34 156 37 155 1.34e-20 88.6
MsG0580027438.01.T01 AT4G29180 40.000 120 69 2 43 160 27 145 2.55e-20 87.8
MsG0580027438.01.T01 AT4G29180 40.000 120 69 2 43 160 27 145 2.65e-20 87.8
MsG0580027438.01.T01 AT4G29180 40.000 120 69 2 43 160 27 145 2.84e-20 87.4
MsG0580027438.01.T01 AT1G51790 39.344 122 64 4 40 158 25 139 3.20e-20 87.4
MsG0580027438.01.T01 AT1G51790 39.344 122 64 4 40 158 25 139 3.20e-20 87.4
MsG0580027438.01.T01 AT1G51790 39.344 122 64 4 40 158 25 139 3.26e-20 87.4
MsG0580027438.01.T01 AT1G51860 36.290 124 69 4 40 160 25 141 5.35e-20 86.7
MsG0580027438.01.T01 AT2G14440 41.803 122 62 4 43 161 28 143 1.49e-19 85.5
MsG0580027438.01.T01 AT1G07550 40.000 125 64 5 43 163 28 145 1.92e-19 85.1
MsG0580027438.01.T01 AT2G28990 38.333 120 64 4 40 156 21 133 2.08e-19 85.1
MsG0580027438.01.T01 AT2G28990 38.333 120 64 4 40 156 21 133 2.08e-19 85.1
MsG0580027438.01.T01 AT4G20450 42.520 127 61 5 40 161 26 145 3.14e-19 84.7
MsG0580027438.01.T01 AT4G20450 42.520 127 61 5 40 161 26 145 3.15e-19 84.7
MsG0580027438.01.T01 AT3G21340 41.935 124 62 4 40 160 29 145 4.45e-19 84.0
MsG0580027438.01.T01 AT3G21340 41.935 124 62 4 40 160 29 145 4.49e-19 84.0
MsG0580027438.01.T01 AT5G59670 38.095 126 67 4 40 161 24 142 4.74e-19 84.0
MsG0580027438.01.T01 AT5G59670 38.095 126 67 4 40 161 24 142 4.74e-19 84.0
MsG0580027438.01.T01 AT1G51870 33.846 130 76 4 40 166 25 147 4.99e-19 84.0
MsG0580027438.01.T01 AT1G51870 33.846 130 76 4 40 166 25 147 5.55e-19 84.0
MsG0580027438.01.T01 AT1G51840 40.870 115 58 4 43 154 32 139 1.42e-18 79.7
MsG0580027438.01.T01 AT1G51840 40.870 115 58 4 43 154 32 139 1.42e-18 79.7
MsG0580027438.01.T01 AT1G51840 40.870 115 58 4 43 154 32 139 1.42e-18 79.7
MsG0580027438.01.T01 AT1G51840 40.870 115 58 4 43 154 32 139 1.42e-18 79.7
MsG0580027438.01.T01 AT1G51840 40.870 115 58 4 43 154 32 139 1.42e-18 79.7
MsG0580027438.01.T01 AT3G46330 39.316 117 61 4 43 156 30 139 1.57e-18 82.4
MsG0580027438.01.T01 AT3G46330 39.316 117 61 4 43 156 30 139 1.60e-18 82.4
MsG0580027438.01.T01 AT2G04300 44.348 115 54 4 43 154 31 138 1.68e-18 82.4
MsG0580027438.01.T01 AT2G04300 44.348 115 54 4 43 154 31 138 1.75e-18 82.4
MsG0580027438.01.T01 AT3G46340 38.760 129 68 4 30 154 18 139 1.98e-18 82.4
MsG0580027438.01.T01 AT1G49100 36.923 130 72 4 40 166 26 148 3.16e-18 81.6
MsG0580027438.01.T01 AT5G59680 35.938 128 71 4 43 166 28 148 1.39e-17 79.7
MsG0580027438.01.T01 AT2G29000 39.130 115 57 3 43 154 29 133 1.44e-17 79.7
MsG0580027438.01.T01 AT1G07560 38.710 124 66 4 36 156 22 138 2.10e-17 79.3
MsG0580027438.01.T01 AT1G51850 39.167 120 63 4 40 156 22 134 2.64e-17 79.0
MsG0580027438.01.T01 AT3G46420 39.831 118 60 4 43 156 28 138 3.82e-17 78.6
MsG0580027438.01.T01 AT1G51850 35.000 140 77 5 40 172 22 154 4.01e-17 78.6
MsG0580027438.01.T01 AT5G59650 39.669 121 62 4 40 156 25 138 8.56e-17 77.4
MsG0580027438.01.T01 AT5G59650 39.669 121 62 4 40 156 25 138 8.99e-17 77.4
MsG0580027438.01.T01 AT3G46400 36.000 125 69 4 41 161 25 142 2.66e-16 76.3
MsG0580027438.01.T01 AT1G51820 39.316 117 63 3 40 154 22 132 3.01e-16 75.9
MsG0580027438.01.T01 AT2G37050 34.091 132 74 6 42 171 26 146 3.43e-16 75.9
MsG0580027438.01.T01 AT2G37050 34.091 132 74 6 42 171 26 146 3.56e-16 75.9
MsG0580027438.01.T01 AT2G37050 34.091 132 74 6 42 171 26 146 3.75e-16 75.9
MsG0580027438.01.T01 AT2G37050 34.091 132 74 6 42 171 26 146 3.97e-16 75.5
MsG0580027438.01.T01 AT1G51805 40.496 121 62 5 40 157 22 135 5.50e-16 75.1
MsG0580027438.01.T01 AT1G51805 40.496 121 62 5 40 157 22 135 5.73e-16 75.1
MsG0580027438.01.T01 AT1G51800 32.867 143 78 5 40 172 25 159 1.72e-15 73.9
MsG0580027438.01.T01 AT5G16900 37.607 117 63 3 43 156 23 132 6.77e-15 72.0
MsG0580027438.01.T01 AT5G16900 37.607 117 63 3 43 156 23 132 7.64e-15 72.0
MsG0580027438.01.T01 AT5G16900 37.607 117 63 3 43 156 23 132 7.64e-15 72.0
MsG0580027438.01.T01 AT5G59660 51.613 62 28 1 97 158 40 99 1.60e-13 68.2
MsG0580027438.01.T01 AT3G46240 37.000 100 53 4 45 144 6 95 2.06e-11 61.6

Find 39 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCATCTTGGAGTCAATCTT+TGG 0.264661 5:-60860723 MsG0580027438.01.T01:CDS
CTTCTTAATCTGACTTTCAT+AGG 0.266666 5:+60860894 None:intergenic
CTAGGTGAGCCCTTCATTAA+TGG 0.274941 5:-60864000 MsG0580027438.01.T01:intron
TTATAACTTAAAACCTAAAC+AGG 0.283618 5:-60860827 MsG0580027438.01.T01:CDS
ATTATCTGATGATATATTCC+TGG 0.346563 5:+60860924 None:intergenic
GTGTTATCATCAGCTTGATA+TGG 0.364613 5:+60860967 None:intergenic
TAACAATTCCTCTTCCCATC+TGG 0.380825 5:+60860847 None:intergenic
TGCTCATCCTTATTTAACTT+TGG 0.383274 5:+60860638 None:intergenic
TCAGGATACTTGGGATCATA+TGG 0.402813 5:+60863967 None:intergenic
AAACCACTCCTCAGGATACT+TGG 0.402932 5:+60863957 None:intergenic
AAGCCCTTGTGCTATATTTG+TGG 0.408157 5:+60860797 None:intergenic
TAGGTGAGCCCTTCATTAAT+GGG 0.416500 5:-60863999 MsG0580027438.01.T01:CDS
GCATCTTGGAGTCAATCTTT+GGG 0.419041 5:-60860722 MsG0580027438.01.T01:CDS
GATAACACCGTCGTCCGGTT+TGG 0.440433 5:-60860952 MsG0580027438.01.T01:CDS
AAAGGTACAGGCGCAATGAT+AGG 0.442087 5:-60863912 MsG0580027438.01.T01:CDS
TATTCCTGGTTTGACCAAAC+CGG 0.461007 5:+60860938 None:intergenic
TTAACTTTGGAAACATAGCC+AGG 0.472449 5:+60860651 None:intergenic
AACTGCTTGCCCATTAATGA+AGG 0.499721 5:+60863990 None:intergenic
CTGATGATAACACCGTCGTC+CGG 0.521861 5:-60860957 MsG0580027438.01.T01:CDS
TTGTTTCTAAACCACTCCTC+AGG 0.523066 5:+60863949 None:intergenic
CCAAGATGCAGATCAAAAGT+TGG 0.526020 5:+60860736 None:intergenic
CTCGTGCTAATGAAAGGTAC+AGG 0.537425 5:-60863924 MsG0580027438.01.T01:CDS
GAAACATAGCCAGGCCTGCT+CGG 0.539946 5:+60860660 None:intergenic
AACCACTCCTCAGGATACTT+GGG 0.552901 5:+60863958 None:intergenic
TACAGGCGCAATGATAGGCC+TGG 0.561031 5:-60863907 MsG0580027438.01.T01:intron
GTGTGATAAGCATTGATTGT+GGG 0.561716 5:-60861026 MsG0580027438.01.T01:CDS
ACAATGCTCGTGCTAATGAA+AGG 0.576920 5:-60863930 MsG0580027438.01.T01:CDS
GTACAACTGAGTTCAGCTAC+AGG 0.584125 5:-60860694 MsG0580027438.01.T01:CDS
TGGGGTAAGTGAAAGTTACA+AGG 0.605414 5:-60861007 MsG0580027438.01.T01:CDS
ACTGCTTGCCCATTAATGAA+GGG 0.632956 5:+60863991 None:intergenic
ATCCCAAGTATCCTGAGGAG+TGG 0.633190 5:-60863960 MsG0580027438.01.T01:CDS
TCGTCCGGTTTGGTCAAACC+AGG 0.642987 5:-60860942 MsG0580027438.01.T01:CDS
AAAACCACAAATATAGCACA+AGG 0.651437 5:-60860801 MsG0580027438.01.T01:CDS
GGTTTGACCAAACCGGACGA+CGG 0.681693 5:+60860945 None:intergenic
ATATGATCCCAAGTATCCTG+AGG 0.691063 5:-60863965 MsG0580027438.01.T01:CDS
TGTGATAAGCATTGATTGTG+GGG 0.697676 5:-60861025 MsG0580027438.01.T01:CDS
TATAACTTAAAACCTAAACA+GGG 0.703066 5:-60860826 MsG0580027438.01.T01:CDS
GGTGTGATAAGCATTGATTG+TGG 0.726933 5:-60861027 MsG0580027438.01.T01:CDS
AAACCACAAATATAGCACAA+GGG 0.743465 5:-60860800 MsG0580027438.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTATTTTCAAGAATTA+GGG - Chr5:60863340-60863359 MsG0580027438.01.T01:intron 10.0%
!!! ATTATACGTTTTATTTTATT+TGG - Chr5:60861131-60861150 MsG0580027438.01.T01:intron 10.0%
!!! TGTATTTTTTAAATGTAATT+GGG + Chr5:60862734-60862753 None:intergenic 10.0%
!!! TTATACGTTTTATTTTATTT+GGG - Chr5:60861132-60861151 MsG0580027438.01.T01:intron 10.0%
!! AATTAAAGAAAAAGAGTAAA+AGG + Chr5:60863260-60863279 None:intergenic 15.0%
!! ATTAGAAATTTGAAAAATGA+AGG - Chr5:60862234-60862253 MsG0580027438.01.T01:intron 15.0%
!! GGATTTAATTGTAATTAATT+AGG + Chr5:60862395-60862414 None:intergenic 15.0%
!!! ATATTATTTTCAAGAATTAG+GGG - Chr5:60863341-60863360 MsG0580027438.01.T01:intron 15.0%
!!! CAATATTATTTTCAAGAATT+AGG - Chr5:60863339-60863358 MsG0580027438.01.T01:intron 15.0%
!!! GTGTATTTTTTAAATGTAAT+TGG + Chr5:60862735-60862754 None:intergenic 15.0%
!! AAACACCAAATAATTGAAAT+AGG + Chr5:60863160-60863179 None:intergenic 20.0%
!! AAACATCAAACAACAAATAT+TGG + Chr5:60860729-60860748 None:intergenic 20.0%
!! AACACCAAATAATTGAAATA+GGG + Chr5:60863159-60863178 None:intergenic 20.0%
!! AATTATAGTATTAGTAAGTG+GGG - Chr5:60860654-60860673 MsG0580027438.01.T01:CDS 20.0%
!! GAAATATCTCTTATAATGTT+TGG - Chr5:60862073-60862092 MsG0580027438.01.T01:intron 20.0%
!! GAATTATAGTATTAGTAAGT+GGG - Chr5:60860653-60860672 MsG0580027438.01.T01:CDS 20.0%
!! TATAACTTAAAACCTAAACA+GGG - Chr5:60863945-60863964 MsG0580027438.01.T01:CDS 20.0%
!! TGAAAAATGAAGGATAATAT+TGG - Chr5:60862244-60862263 MsG0580027438.01.T01:intron 20.0%
!! TGAATTATAGTATTAGTAAG+TGG - Chr5:60860652-60860671 MsG0580027438.01.T01:CDS 20.0%
!! TTATAACTTAAAACCTAAAC+AGG - Chr5:60863944-60863963 MsG0580027438.01.T01:CDS 20.0%
!! TTTCAAATTTCTAATATGCT+AGG + Chr5:60862229-60862248 None:intergenic 20.0%
!!! AAATTTTGTAAGGTTATTCA+AGG + Chr5:60863509-60863528 None:intergenic 20.0%
!!! GTTGAAATTGAAATTTTGTA+AGG + Chr5:60863519-60863538 None:intergenic 20.0%
!!! TTTTTCTTTATTTTCTAGAG+CGG - Chr5:60862177-60862196 MsG0580027438.01.T01:intron 20.0%
! AAGTATCTATTTATAGGTTC+TGG - Chr5:60862597-60862616 MsG0580027438.01.T01:intron 25.0%
! ACAAGTTTGATTATAATTGC+AGG - Chr5:60863723-60863742 MsG0580027438.01.T01:intron 25.0%
! ACACCAAATAATTGAAATAG+GGG + Chr5:60863158-60863177 None:intergenic 25.0%
! ACCTTATAGTCAAAATACTA+TGG - Chr5:60861522-60861541 MsG0580027438.01.T01:intron 25.0%
! AGTAACAATACCAATGTATT+TGG + Chr5:60861601-60861620 None:intergenic 25.0%
! ATGTATAACTTACAAGACAT+AGG - Chr5:60862788-60862807 MsG0580027438.01.T01:intron 25.0%
! ATGTATTACTTACAAGAGAT+AGG - Chr5:60862441-60862460 MsG0580027438.01.T01:intron 25.0%
! ATTATAGTATTAGTAAGTGG+GGG - Chr5:60860655-60860674 MsG0580027438.01.T01:CDS 25.0%
! ATTATCTGATGATATATTCC+TGG + Chr5:60863850-60863869 None:intergenic 25.0%
! CAAGAAAACTAATACAATCT+TGG - Chr5:60863314-60863333 MsG0580027438.01.T01:intron 25.0%
! GGCTATAAGTATCTATTTAT+AGG - Chr5:60862591-60862610 MsG0580027438.01.T01:intron 25.0%
! GTAATTAATTTCTCTGTGTT+AGG + Chr5:60862763-60862782 None:intergenic 25.0%
! GTAATTGGGATTAAGTTTAA+TGG + Chr5:60862720-60862739 None:intergenic 25.0%
! GTTATTCAAGGTTAGAATAA+TGG + Chr5:60863497-60863516 None:intergenic 25.0%
! GTTTGGAAACATGAAAAATT+GGG + Chr5:60861659-60861678 None:intergenic 25.0%
! TAATTAACTACACACAATGT+TGG - Chr5:60863275-60863294 MsG0580027438.01.T01:intron 25.0%
! TGCTGATAGAAACTAATAAT+GGG - Chr5:60861945-60861964 MsG0580027438.01.T01:intron 25.0%
! TTATAGTCAAAATACTATGG+TGG - Chr5:60861525-60861544 MsG0580027438.01.T01:intron 25.0%
!! AATATATTTGAGACTTCCTT+TGG - Chr5:60861230-60861249 MsG0580027438.01.T01:intron 25.0%
!! AATATTTGTTTCTTCCTCAA+TGG - Chr5:60862659-60862678 MsG0580027438.01.T01:intron 25.0%
!! ATATTTGTTTCTTCCTCAAT+GGG - Chr5:60862660-60862679 MsG0580027438.01.T01:intron 25.0%
!! TCTAAAACTTGGTAAAAGAT+TGG - Chr5:60862554-60862573 MsG0580027438.01.T01:intron 25.0%
!!! ACCATAGTATTTTGACTATA+AGG + Chr5:60861526-60861545 None:intergenic 25.0%
!!! CAAGAAATTTTGAAAGAGAA+GGG - Chr5:60860901-60860920 MsG0580027438.01.T01:CDS 25.0%
!!! CTTCTCTTTATTTTTTGATC+AGG + Chr5:60861971-60861990 None:intergenic 25.0%
!!! GCTCTAGAAAATAAAGAAAA+AGG + Chr5:60862178-60862197 None:intergenic 25.0%
!!! TATTTTTCAATTCCCTAACT+AGG + Chr5:60862287-60862306 None:intergenic 25.0%
!!! TCAAGAAATTTTGAAAGAGA+AGG - Chr5:60860900-60860919 MsG0580027438.01.T01:CDS 25.0%
AAAACCACAAATATAGCACA+AGG - Chr5:60863970-60863989 MsG0580027438.01.T01:CDS 30.0%
AAACCACAAATATAGCACAA+GGG - Chr5:60863971-60863990 MsG0580027438.01.T01:CDS 30.0%
AAGAAATAACACAACACTCT+TGG + Chr5:60861159-60861178 None:intergenic 30.0%
AATCATACTTAACCTGTAGA+AGG - Chr5:60861414-60861433 MsG0580027438.01.T01:intron 30.0%
AGAAATAACACAACACTCTT+GGG + Chr5:60861158-60861177 None:intergenic 30.0%
AGAAGAGTTATACCAATGTT+CGG + Chr5:60861256-60861275 None:intergenic 30.0%
ATGAAAAATTGGGTGAATAC+AGG + Chr5:60861649-60861668 None:intergenic 30.0%
ATTGGGATTAAGTTTAATGG+AGG + Chr5:60862717-60862736 None:intergenic 30.0%
CAAATAACACTTAGATGAGA+TGG + Chr5:60863463-60863482 None:intergenic 30.0%
CTATCAAAATGACACATTTG+AGG - Chr5:60861286-60861305 MsG0580027438.01.T01:intron 30.0%
CTTCTTAATCTGACTTTCAT+AGG + Chr5:60863880-60863899 None:intergenic 30.0%
GAACTTGGATGAATGAATAA+GGG - Chr5:60863671-60863690 MsG0580027438.01.T01:intron 30.0%
GGTTTGGAAACATGAAAAAT+TGG + Chr5:60861660-60861679 None:intergenic 30.0%
GTAAGTAATTTCTCTCTGTT+TGG + Chr5:60862416-60862435 None:intergenic 30.0%
TAACTTACAAGACATAGGAA+AGG - Chr5:60862793-60862812 MsG0580027438.01.T01:intron 30.0%
TACCAATGTATTTGGCAATT+CGG + Chr5:60861593-60861612 None:intergenic 30.0%
TATTACTTACAAGAGATAGG+CGG - Chr5:60862444-60862463 MsG0580027438.01.T01:intron 30.0%
TCATATTTCTTGACGTAGAA+TGG - Chr5:60860703-60860722 MsG0580027438.01.T01:CDS 30.0%
TCTAGGTTTCGAAGAATAAT+TGG + Chr5:60863595-60863614 None:intergenic 30.0%
! AGATTGGCTGAATTAAAATC+AGG - Chr5:60862570-60862589 MsG0580027438.01.T01:intron 30.0%
! CATCTCATCTAAGTGTTATT+TGG - Chr5:60863461-60863480 MsG0580027438.01.T01:intron 30.0%
! CATTGAGAAATTTTCCAGAT+GGG - Chr5:60863910-60863929 MsG0580027438.01.T01:CDS 30.0%
! GTGCTGATAGAAACTAATAA+TGG - Chr5:60861944-60861963 MsG0580027438.01.T01:intron 30.0%
! TATTTGTTTCTTCCTCAATG+GGG - Chr5:60862661-60862680 MsG0580027438.01.T01:intron 30.0%
! TCATTGAGAAATTTTCCAGA+TGG - Chr5:60863909-60863928 MsG0580027438.01.T01:CDS 30.0%
! TTCGAAGAATAATTGGTGTT+TGG + Chr5:60863588-60863607 None:intergenic 30.0%
!! ACAAGGGCTTATTTTCAATA+TGG - Chr5:60863987-60864006 MsG0580027438.01.T01:CDS 30.0%
!!! AAAGAGTTTTGTTCCTAGTT+AGG - Chr5:60862271-60862290 MsG0580027438.01.T01:intron 30.0%
!!! AAGAGTTTTGTTCCTAGTTA+GGG - Chr5:60862272-60862291 MsG0580027438.01.T01:intron 30.0%
!!! TAGAGTGTTACTGTCTTTTT+TGG - Chr5:60862104-60862123 MsG0580027438.01.T01:intron 30.0%
AAAGAAACGCTTAGTGATCT+TGG + Chr5:60861562-60861581 None:intergenic 35.0%
AACACTTAGATGAGATGGTA+TGG + Chr5:60863458-60863477 None:intergenic 35.0%
ACACTTAGATGAGATGGTAT+GGG + Chr5:60863457-60863476 None:intergenic 35.0%
AGAGAAATGATGCATAAACG+TGG + Chr5:60862868-60862887 None:intergenic 35.0%
ATAATCTGACCATCGCTTTA+AGG + Chr5:60862326-60862345 None:intergenic 35.0%
ATCATCCGGTTGAAACAATT+TGG + Chr5:60862823-60862842 None:intergenic 35.0%
ATGGACAAAGAGTTAGAAGT+AGG - Chr5:60861475-60861494 MsG0580027438.01.T01:intron 35.0%
ATGTATTTGGCAATTCGGTA+AGG + Chr5:60861588-60861607 None:intergenic 35.0%
ATTACTTACAAGAGATAGGC+GGG - Chr5:60862445-60862464 MsG0580027438.01.T01:intron 35.0%
ATTGGGTGAATACAGGATTT+AGG + Chr5:60861642-60861661 None:intergenic 35.0%
CATGTAATAGCTTCATCCAA+AGG + Chr5:60861719-60861738 None:intergenic 35.0%
CCAAATAATTGAAATAGGGG+AGG + Chr5:60863155-60863174 None:intergenic 35.0%
CCTCCCCTATTTCAATTATT+TGG - Chr5:60863152-60863171 MsG0580027438.01.T01:intron 35.0%
CGAACTTGGATGAATGAATA+AGG - Chr5:60863670-60863689 MsG0580027438.01.T01:intron 35.0%
CTTTGGATGAAGCTATTACA+TGG - Chr5:60861717-60861736 MsG0580027438.01.T01:intron 35.0%
GATGACCAAATTGTTTCAAC+CGG - Chr5:60862815-60862834 MsG0580027438.01.T01:intron 35.0%
GTGTTATCATCAGCTTGATA+TGG + Chr5:60863807-60863826 None:intergenic 35.0%
TACCGAATTGCCAAATACAT+TGG - Chr5:60861588-60861607 MsG0580027438.01.T01:intron 35.0%
TAGAATCGAGGAAACTAACA+GGG - Chr5:60863611-60863630 MsG0580027438.01.T01:intron 35.0%
TCAAGAATAACAACAGTGAC+CGG - Chr5:60863644-60863663 MsG0580027438.01.T01:intron 35.0%
TGATTACAGCTAACATCTGA+TGG + Chr5:60861399-60861418 None:intergenic 35.0%
TGTATTTGGCAATTCGGTAA+GGG + Chr5:60861587-60861606 None:intergenic 35.0%
TTATCCTAACTGTAACCTTG+AGG - Chr5:60861883-60861902 MsG0580027438.01.T01:intron 35.0%
TTGAAAGAGAAGGGAAAATG+TGG - Chr5:60860910-60860929 MsG0580027438.01.T01:CDS 35.0%
! ACACATTTGAGGCTTCTTTA+TGG - Chr5:60861297-60861316 MsG0580027438.01.T01:intron 35.0%
! ATATTTGTTTCTTCCCCGAT+AGG - Chr5:60863004-60863023 MsG0580027438.01.T01:intron 35.0%
! GGTGTTTGAGTTACTTTGTT+GGG - Chr5:60863173-60863192 MsG0580027438.01.T01:intron 35.0%
! TATTTGTTTCTTCCCCGATA+GGG - Chr5:60863005-60863024 MsG0580027438.01.T01:intron 35.0%
! TGAATAAAAGTGTGCCTCTT+AGG + Chr5:60861208-60861227 None:intergenic 35.0%
! TGGTGTTTGAGTTACTTTGT+TGG - Chr5:60863172-60863191 MsG0580027438.01.T01:intron 35.0%
! TTAACTTTGGAAACATAGCC+AGG + Chr5:60864123-60864142 None:intergenic 35.0%
! TTTTGTGAACCTTAAAGCGA+TGG - Chr5:60862314-60862333 MsG0580027438.01.T01:intron 35.0%
!! GTGTGATAAGCATTGATTGT+GGG - Chr5:60863745-60863764 MsG0580027438.01.T01:intron 35.0%
!! TGTGATAAGCATTGATTGTG+GGG - Chr5:60863746-60863765 MsG0580027438.01.T01:intron 35.0%
!! TTGTTTGTTTTCCTCTCACT+AGG - Chr5:60860753-60860772 MsG0580027438.01.T01:CDS 35.0%
!!! ACCAAGTTTTAGAGAAAGAG+AGG + Chr5:60862547-60862566 None:intergenic 35.0%
!!! CAAGTTTTAGAGAAAGAGAG+GGG + Chr5:60862545-60862564 None:intergenic 35.0%
!!! CCAAGTTTTAGAGAAAGAGA+GGG + Chr5:60862546-60862565 None:intergenic 35.0%
!!! GTTACTGTCTTTTTTGGATC+TGG - Chr5:60862110-60862129 MsG0580027438.01.T01:intron 35.0%
!!! TTGTGGTTTTTTCCCTGTTT+AGG + Chr5:60863960-60863979 None:intergenic 35.0%
AAAGCGATGGTCAGATTATG+AGG - Chr5:60862327-60862346 MsG0580027438.01.T01:intron 40.0%
AACTGCTTGCCCATTAATGA+AGG + Chr5:60860784-60860803 None:intergenic 40.0%
AAGAGTTAGAAGTAGGCACT+TGG - Chr5:60861482-60861501 MsG0580027438.01.T01:intron 40.0%
AAGCCCTTGTGCTATATTTG+TGG + Chr5:60863977-60863996 None:intergenic 40.0%
AAGCGATGGTCAGATTATGA+GGG - Chr5:60862328-60862347 MsG0580027438.01.T01:intron 40.0%
AATCTGTAAGCTCAACCGAA+TGG - Chr5:60863098-60863117 MsG0580027438.01.T01:intron 40.0%
ACAATGCTCGTGCTAATGAA+AGG - Chr5:60860841-60860860 MsG0580027438.01.T01:CDS 40.0%
ACACACTAACAGTGGTAGAA+TGG - Chr5:60861456-60861475 MsG0580027438.01.T01:intron 40.0%
ACATAATCACGTGCCTAGAA+GGG + Chr5:60862027-60862046 None:intergenic 40.0%
ACTGCTTGCCCATTAATGAA+GGG + Chr5:60860783-60860802 None:intergenic 40.0%
AGAATCGAGGAAACTAACAG+GGG - Chr5:60863612-60863631 MsG0580027438.01.T01:intron 40.0%
AGAGTTAGAAGTAGGCACTT+GGG - Chr5:60861483-60861502 MsG0580027438.01.T01:intron 40.0%
AGATTCTCCAGTGAAGCATA+TGG + Chr5:60863083-60863102 None:intergenic 40.0%
AGGACAAGGTCGAATATGAT+GGG - Chr5:60861903-60861922 MsG0580027438.01.T01:intron 40.0%
ATATGATCCCAAGTATCCTG+AGG - Chr5:60860806-60860825 MsG0580027438.01.T01:CDS 40.0%
ATCTGTAAGCTCAACCGAAT+GGG - Chr5:60863099-60863118 MsG0580027438.01.T01:intron 40.0%
CAGAACTTATGTAGCCTAAG+AGG - Chr5:60861191-60861210 MsG0580027438.01.T01:intron 40.0%
CATTCATCCAAGTTCGTTTC+CGG + Chr5:60863666-60863685 None:intergenic 40.0%
CCAAGATGCAGATCAAAAGT+TGG + Chr5:60864038-60864057 None:intergenic 40.0%
CGAATGCTTGTAGATTAAGC+TGG + Chr5:60862492-60862511 None:intergenic 40.0%
CTAGAATCGAGGAAACTAAC+AGG - Chr5:60863610-60863629 MsG0580027438.01.T01:intron 40.0%
CTCATCAACTGAAGACACTT+GGG - Chr5:60861835-60861854 MsG0580027438.01.T01:intron 40.0%
CTTGACATGTCGTTATTACC+AGG + Chr5:60860885-60860904 None:intergenic 40.0%
GAAATGATGCATAAACGTGG+TGG + Chr5:60862865-60862884 None:intergenic 40.0%
GCAAGCAATGAGCATAAAAG+AGG + Chr5:60863236-60863255 None:intergenic 40.0%
GCATCTTGGAGTCAATCTTT+GGG - Chr5:60864049-60864068 MsG0580027438.01.T01:intron 40.0%
GTAATAGCTTCATCCAAAGG+TGG + Chr5:60861716-60861735 None:intergenic 40.0%
TAACAATTCCTCTTCCCATC+TGG + Chr5:60863927-60863946 None:intergenic 40.0%
TAACTGTAACCTTGAGGACA+AGG - Chr5:60861889-60861908 MsG0580027438.01.T01:intron 40.0%
TAGGTGAGCCCTTCATTAAT+GGG - Chr5:60860772-60860791 MsG0580027438.01.T01:CDS 40.0%
TCAGGATACTTGGGATCATA+TGG + Chr5:60860807-60860826 None:intergenic 40.0%
TCTCATCAACTGAAGACACT+TGG - Chr5:60861834-60861853 MsG0580027438.01.T01:intron 40.0%
TGAACAGAGACATGCATAGT+GGG - Chr5:60860933-60860952 MsG0580027438.01.T01:CDS 40.0%
TGATGGGGAATGTAGTGATA+CGG - Chr5:60861919-60861938 MsG0580027438.01.T01:intron 40.0%
TGCATCTTGGAGTCAATCTT+TGG - Chr5:60864048-60864067 MsG0580027438.01.T01:intron 40.0%
TGGGGTAAGTGAAAGTTACA+AGG - Chr5:60863764-60863783 MsG0580027438.01.T01:intron 40.0%
TTATACCAATGTTCGGCCAA+AGG + Chr5:60861249-60861268 None:intergenic 40.0%
TTCTAGGCACGTGATTATGT+GGG - Chr5:60862027-60862046 MsG0580027438.01.T01:intron 40.0%
TTCTTCGAAACCTAGAATCG+AGG - Chr5:60863599-60863618 MsG0580027438.01.T01:intron 40.0%
TTGAGTGCTTGTAGATCATC+CGG + Chr5:60862837-60862856 None:intergenic 40.0%
TTGTCCTCAAGGTTACAGTT+AGG + Chr5:60861890-60861909 None:intergenic 40.0%
! AAAGAGAGTGTGATGTTCGT+TGG - Chr5:60862977-60862996 MsG0580027438.01.T01:intron 40.0%
! AAGAGAGTGTGATGTTCGTT+GGG - Chr5:60862978-60862997 MsG0580027438.01.T01:intron 40.0%
! CCAACTTTTGATCTGCATCT+TGG - Chr5:60864035-60864054 MsG0580027438.01.T01:intron 40.0%
! CTGTTAGTTTCCTCGATTCT+AGG + Chr5:60863612-60863631 None:intergenic 40.0%
! GAAATTTTCCAGATGGGAAG+AGG - Chr5:60863916-60863935 MsG0580027438.01.T01:CDS 40.0%
! TAGAGAGATTGACTTTCGAG+CGG + Chr5:60862206-60862225 None:intergenic 40.0%
! TATTCCTGGTTTGACCAAAC+CGG + Chr5:60863836-60863855 None:intergenic 40.0%
! TTTTGCCACATTAGCCAAGT+GGG - Chr5:60862684-60862703 MsG0580027438.01.T01:intron 40.0%
!! AAGTGTCTTCAGTTGATGAG+AGG + Chr5:60861835-60861854 None:intergenic 40.0%
!! CCCTCTCTTTCTCTAAAACT+TGG - Chr5:60862543-60862562 MsG0580027438.01.T01:intron 40.0%
!! GGTGTGATAAGCATTGATTG+TGG - Chr5:60863744-60863763 MsG0580027438.01.T01:intron 40.0%
!! TTGTTTCTAAACCACTCCTC+AGG + Chr5:60860825-60860844 None:intergenic 40.0%
AAACCACTCCTCAGGATACT+TGG + Chr5:60860817-60860836 None:intergenic 45.0%
AACCACTCCTCAGGATACTT+GGG + Chr5:60860816-60860835 None:intergenic 45.0%
AATGTGGCAAAACCCCATTG+AGG + Chr5:60862676-60862695 None:intergenic 45.0%
ACGCAAACTACAGACTGCTA+AGG - Chr5:60861776-60861795 MsG0580027438.01.T01:intron 45.0%
AGAAAAGTCCAACGCCACAA+AGG - Chr5:60861989-60862008 MsG0580027438.01.T01:intron 45.0%
AGAAAGAGAGGGGAGAAAGA+TGG + Chr5:60862535-60862554 None:intergenic 45.0%
AGACACTTGGGAAAACTGGA+AGG - Chr5:60861847-60861866 MsG0580027438.01.T01:intron 45.0%
AGACTGCTAAGGGTAAGATC+AGG - Chr5:60861787-60861806 MsG0580027438.01.T01:intron 45.0%
AGGAAACTAACAGGGGTGAA+GGG - Chr5:60863619-60863638 MsG0580027438.01.T01:intron 45.0%
ATGACTTCCGAAAAACGGCT+TGG + Chr5:60861682-60861701 None:intergenic 45.0%
ATGCGATCACACACTAACAG+TGG - Chr5:60861448-60861467 MsG0580027438.01.T01:intron 45.0%
CACATAATCACGTGCCTAGA+AGG + Chr5:60862028-60862047 None:intergenic 45.0%
CATATTCGACCTTGTCCTCA+AGG + Chr5:60861901-60861920 None:intergenic 45.0%
CCTACAACCAGCACAAATTC+TGG - Chr5:60861749-60861768 MsG0580027438.01.T01:intron 45.0%
CGCAAACTACAGACTGCTAA+GGG - Chr5:60861777-60861796 MsG0580027438.01.T01:intron 45.0%
CGGCAATGACTTCCGAAAAA+CGG + Chr5:60861687-60861706 None:intergenic 45.0%
CTAGGTGAGCCCTTCATTAA+TGG - Chr5:60860771-60860790 MsG0580027438.01.T01:CDS 45.0%
CTGAAGACACTTGGGAAAAC+TGG - Chr5:60861843-60861862 MsG0580027438.01.T01:intron 45.0%
CTTCTAGGCACGTGATTATG+TGG - Chr5:60862026-60862045 MsG0580027438.01.T01:intron 45.0%
GAAGAGGAAAACACCCTTCT+AGG - Chr5:60862011-60862030 MsG0580027438.01.T01:intron 45.0%
GACAGTAACACTCTAGCTAG+AGG + Chr5:60862099-60862118 None:intergenic 45.0%
GAGGACAAGGTCGAATATGA+TGG - Chr5:60861902-60861921 MsG0580027438.01.T01:intron 45.0%
GCTTAGTGATCTTGGAGTAG+CGG + Chr5:60861554-60861573 None:intergenic 45.0%
GGACAAGGTCGAATATGATG+GGG - Chr5:60861904-60861923 MsG0580027438.01.T01:intron 45.0%
GGAGAAAGATGGAAGAAACG+AGG + Chr5:60862524-60862543 None:intergenic 45.0%
GGGTGAGTGATTCATCAAGT+TGG + Chr5:60861372-60861391 None:intergenic 45.0%
GTACAACTGAGTTCAGCTAC+AGG - Chr5:60864077-60864096 MsG0580027438.01.T01:intron 45.0%
GTGAACAGAGACATGCATAG+TGG - Chr5:60860932-60860951 MsG0580027438.01.T01:CDS 45.0%
GTTAGTGTGTGATCGCATGT+GGG + Chr5:60861446-60861465 None:intergenic 45.0%
TAGAAGTAGGCACTTGGGTA+TGG - Chr5:60861488-60861507 MsG0580027438.01.T01:intron 45.0%
TCCTGCATCAATATCCAGCT+TGG + Chr5:60861042-60861061 None:intergenic 45.0%
TGACTTCCGAAAAACGGCTT+GGG + Chr5:60861681-60861700 None:intergenic 45.0%
TGTTAGTGTGTGATCGCATG+TGG + Chr5:60861447-60861466 None:intergenic 45.0%
TTTGCCACATTAGCCAAGTG+GGG - Chr5:60862685-60862704 MsG0580027438.01.T01:intron 45.0%
! AAAGGTACAGGCGCAATGAT+AGG - Chr5:60860859-60860878 MsG0580027438.01.T01:CDS 45.0%
! AGAGAGTGTGATGTTCGTTG+GGG - Chr5:60862979-60862998 MsG0580027438.01.T01:intron 45.0%
! AGCTAACATCTGATGGCGTT+GGG + Chr5:60861392-60861411 None:intergenic 45.0%
! CTCGTGCTAATGAAAGGTAC+AGG - Chr5:60860847-60860866 MsG0580027438.01.T01:CDS 45.0%
! GGCGAATAGATTAGCTCGTT+GGG - Chr5:60863194-60863213 MsG0580027438.01.T01:intron 45.0%
! GGTGTTTTCCTCTTCCTTTG+TGG + Chr5:60862006-60862025 None:intergenic 45.0%
! GTTTTGCCACATTAGCCAAG+TGG - Chr5:60862683-60862702 MsG0580027438.01.T01:intron 45.0%
!! CCAGAATTTGTGCTGGTTGT+AGG + Chr5:60861752-60861771 None:intergenic 45.0%
!! TGTGCTGGTTGTAGGAACAA+AGG + Chr5:60861744-60861763 None:intergenic 45.0%
!!! TCCAAACCCAAGCCGTTTTT+CGG - Chr5:60861672-60861691 MsG0580027438.01.T01:intron 45.0%
!!! TAATTTTATTAATTTTCTTA+TGG + Chr5:60862154-60862173 None:intergenic 5.0%
AATATACACGCCCCTGGTGA+AGG + Chr5:60862630-60862649 None:intergenic 50.0%
ACAGTGACCGGAAACGAACT+TGG - Chr5:60863656-60863675 MsG0580027438.01.T01:intron 50.0%
ACTTAACCTGTAGAAGGCCC+AGG - Chr5:60861420-60861439 MsG0580027438.01.T01:intron 50.0%
ATCAGGCAGGTTCTTGTGCT+AGG - Chr5:60861804-60861823 MsG0580027438.01.T01:intron 50.0%
ATCCCAAGTATCCTGAGGAG+TGG - Chr5:60860811-60860830 MsG0580027438.01.T01:CDS 50.0%
ATGGAGGTTTAAGCCCCACT+TGG + Chr5:60862701-60862720 None:intergenic 50.0%
CAATATCCAGCTTGGCTGCT+GGG + Chr5:60861034-60861053 None:intergenic 50.0%
CGTGAGTCCAGAATTTGTGC+TGG + Chr5:60861759-60861778 None:intergenic 50.0%
CTAGCAAATATACACGCCCC+TGG + Chr5:60862636-60862655 None:intergenic 50.0%
CTGACGTGGCATAACCCTAT+CGG + Chr5:60863022-60863041 None:intergenic 50.0%
CTGATGATAACACCGTCGTC+CGG - Chr5:60863814-60863833 MsG0580027438.01.T01:intron 50.0%
GACTTCCTTTGGCCGAACAT+TGG - Chr5:60861241-60861260 MsG0580027438.01.T01:intron 50.0%
GAGAGAGAGAGAGAGAGCTT+AGG + Chr5:60862893-60862912 None:intergenic 50.0%
GAGGAAACTAACAGGGGTGA+AGG - Chr5:60863618-60863637 MsG0580027438.01.T01:intron 50.0%
GCCAAGCTGGATATTGATGC+AGG - Chr5:60861038-60861057 MsG0580027438.01.T01:intron 50.0%
GGGTATCCAGCAGCATTGTT+GGG + Chr5:60860986-60861005 None:intergenic 50.0%
TAAGCCCCACTTGGCTAATG+TGG + Chr5:60862692-60862711 None:intergenic 50.0%
TATCCAGCAGCATTGTTGGG+AGG + Chr5:60860983-60861002 None:intergenic 50.0%
TCAATATCCAGCTTGGCTGC+TGG + Chr5:60861035-60861054 None:intergenic 50.0%
TCAGGCAGGTTCTTGTGCTA+GGG - Chr5:60861805-60861824 MsG0580027438.01.T01:intron 50.0%
TCATCCAAAGGTGGCACTTG+CGG + Chr5:60861707-60861726 None:intergenic 50.0%
TCTCCAGTGAAGCATATGGC+TGG + Chr5:60863079-60863098 None:intergenic 50.0%
TGACGTGGCATAACCCTATC+GGG + Chr5:60863021-60863040 None:intergenic 50.0%
TGCTAAGGGTAAGATCAGGC+AGG - Chr5:60861791-60861810 MsG0580027438.01.T01:intron 50.0%
TGGGGAATGTAGTGATACGG+AGG - Chr5:60861922-60861941 MsG0580027438.01.T01:intron 50.0%
TTAGACCGCCATTGCTTGCT+AGG - Chr5:60863053-60863072 MsG0580027438.01.T01:intron 50.0%
TTCCTCTTCCTTTGTGGCGT+TGG + Chr5:60862000-60862019 None:intergenic 50.0%
! AGGGTATCCAGCAGCATTGT+TGG + Chr5:60860987-60861006 None:intergenic 50.0%
! CAGCTAACATCTGATGGCGT+TGG + Chr5:60861393-60861412 None:intergenic 50.0%
! CAGGGGCGTGTATATTTGCT+AGG - Chr5:60862634-60862653 MsG0580027438.01.T01:intron 50.0%
! GGGCGAATAGATTAGCTCGT+TGG - Chr5:60863193-60863212 MsG0580027438.01.T01:intron 50.0%
! TCCGAAAAACGGCTTGGGTT+TGG + Chr5:60861676-60861695 None:intergenic 50.0%
! TGGCGGTCTAAAGTCCCATT+CGG + Chr5:60863116-60863135 None:intergenic 50.0%
AGGCCAGCCATATGCTTCAC+TGG - Chr5:60863073-60863092 MsG0580027438.01.T01:intron 55.0%
ATCCGCCAGCATTGTTGGGA+GGG + Chr5:60861006-60861025 None:intergenic 55.0%
ATTGCCGCAAGTGCCACCTT+TGG - Chr5:60861700-60861719 MsG0580027438.01.T01:intron 55.0%
CAGGCAGGTTCTTGTGCTAG+GGG - Chr5:60861806-60861825 MsG0580027438.01.T01:intron 55.0%
CCAACACTCACGATCTGCGA+AGG - Chr5:60861332-60861351 MsG0580027438.01.T01:intron 55.0%
CCTTCGCAGATCGTGAGTGT+TGG + Chr5:60861335-60861354 None:intergenic 55.0%
CTGGACAAGCTCCTTCACCA+GGG - Chr5:60862616-60862635 MsG0580027438.01.T01:intron 55.0%
GAAACATAGCCAGGCCTGCT+CGG + Chr5:60864114-60864133 None:intergenic 55.0%
GACGTGGCATAACCCTATCG+GGG + Chr5:60863020-60863039 None:intergenic 55.0%
GAGGCTCGTCTAGCGAGTAA+TGG + Chr5:60863136-60863155 None:intergenic 55.0%
GATAACACCGTCGTCCGGTT+TGG - Chr5:60863819-60863838 MsG0580027438.01.T01:intron 55.0%
GATCTGCGAAGGATCCACTG+CGG - Chr5:60861343-60861362 MsG0580027438.01.T01:intron 55.0%
GCTCGTCTAGCGAGTAATGG+CGG + Chr5:60863133-60863152 None:intergenic 55.0%
GGATACCCTCCCAACAATGC+TGG - Chr5:60860998-60861017 MsG0580027438.01.T01:CDS 55.0%
GGGTATCCGCCAGCATTGTT+GGG + Chr5:60861010-60861029 None:intergenic 55.0%
GGTTTGACCAAACCGGACGA+CGG + Chr5:60863829-60863848 None:intergenic 55.0%
GTCCAACGCCACAAAGGAAG+AGG - Chr5:60861995-60862014 MsG0580027438.01.T01:intron 55.0%
GTTATGCCACGTCAGCCAAG+CGG - Chr5:60863027-60863046 MsG0580027438.01.T01:intron 55.0%
TACAGGCGCAATGATAGGCC+TGG - Chr5:60860864-60860883 MsG0580027438.01.T01:CDS 55.0%
TACCCTCCCAACAATGCTGG+CGG - Chr5:60861001-60861020 MsG0580027438.01.T01:CDS 55.0%
TATCCGCCAGCATTGTTGGG+AGG + Chr5:60861007-60861026 None:intergenic 55.0%
TCTGGACAAGCTCCTTCACC+AGG - Chr5:60862615-60862634 MsG0580027438.01.T01:intron 55.0%
TGAAGGGCTCACCTAGTGAG+AGG + Chr5:60860767-60860786 None:intergenic 55.0%
TGGACAAGCTCCTTCACCAG+GGG - Chr5:60862617-60862636 MsG0580027438.01.T01:intron 55.0%
TTATGCCACGTCAGCCAAGC+GGG - Chr5:60863028-60863047 MsG0580027438.01.T01:intron 55.0%
! AGGCGTTTTACGTACCGAGC+AGG - Chr5:60864097-60864116 MsG0580027438.01.T01:intron 55.0%
! AGGGTATCCGCCAGCATTGT+TGG + Chr5:60861011-60861030 None:intergenic 55.0%
! TTTTACGTACCGAGCAGGCC+TGG - Chr5:60864102-60864121 MsG0580027438.01.T01:intron 55.0%
!! ATGGCTGGCCTAGCAAGCAA+TGG + Chr5:60863064-60863083 None:intergenic 55.0%
!! CATCAAGTTGGCAACCGCAG+TGG + Chr5:60861360-60861379 None:intergenic 55.0%
!! CGCAGATCGTGAGTGTTGGT+TGG + Chr5:60861331-60861350 None:intergenic 55.0%
!! TCGTCCGGTTTGGTCAAACC+AGG - Chr5:60863829-60863848 MsG0580027438.01.T01:intron 55.0%
ATCCAGCTTGGCTGCTGGGA+GGG + Chr5:60861030-60861049 None:intergenic 60.0%
CCACCTCCCAACAATGCTGC+TGG - Chr5:60860977-60860996 MsG0580027438.01.T01:CDS 60.0%
CCAGCAGCATTGTTGGGAGG+TGG + Chr5:60860980-60860999 None:intergenic 60.0%
GGTCCAGAGTTCTGCACTGG+AGG + Chr5:60860959-60860978 None:intergenic 60.0%
GGTGGTCCAGAGTTCTGCAC+TGG + Chr5:60860962-60860981 None:intergenic 60.0%
GTGTGATCGCATGTGGGCCT+GGG + Chr5:60861440-60861459 None:intergenic 60.0%
TATCCAGCTTGGCTGCTGGG+AGG + Chr5:60861031-60861050 None:intergenic 60.0%
TATGCCACGTCAGCCAAGCG+GGG - Chr5:60863029-60863048 MsG0580027438.01.T01:intron 60.0%
TGTGTGATCGCATGTGGGCC+TGG + Chr5:60861441-60861460 None:intergenic 60.0%
! GCTGGCCTAGCAAGCAATGG+CGG + Chr5:60863061-60863080 None:intergenic 60.0%
ATGGCGGTCTAAGCCCCGCT+TGG + Chr5:60863045-60863064 None:intergenic 65.0%
GGGCCTCCAGTGCAGAACTC+TGG - Chr5:60860953-60860972 MsG0580027438.01.T01:CDS 65.0%
TAAGCCCCGCTTGGCTGACG+TGG + Chr5:60863036-60863055 None:intergenic 65.0%
TACCCTCCCAGCAGCCAAGC+TGG - Chr5:60861025-60861044 MsG0580027438.01.T01:CDS 65.0%
TGTGGGCCTGGGCCTTCTAC+AGG + Chr5:60861429-60861448 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 60860651 60864142 60860651 ID=MsG0580027438.01;Name=MsG0580027438.01
Chr5 mRNA 60860651 60864142 60860651 ID=MsG0580027438.01.T01;Parent=MsG0580027438.01;Name=MsG0580027438.01.T01;_AED=0.55;_eAED=0.56;_QI=0|0|0|1|1|1|3|0|174
Chr5 exon 60864127 60864142 60864127 ID=MsG0580027438.01.T01:exon:13485;Parent=MsG0580027438.01.T01
Chr5 exon 60863908 60864018 60863908 ID=MsG0580027438.01.T01:exon:13484;Parent=MsG0580027438.01.T01
Chr5 exon 60860651 60861048 60860651 ID=MsG0580027438.01.T01:exon:13483;Parent=MsG0580027438.01.T01
Chr5 CDS 60864127 60864142 60864127 ID=MsG0580027438.01.T01:cds;Parent=MsG0580027438.01.T01
Chr5 CDS 60863908 60864018 60863908 ID=MsG0580027438.01.T01:cds;Parent=MsG0580027438.01.T01
Chr5 CDS 60860651 60861048 60860651 ID=MsG0580027438.01.T01:cds;Parent=MsG0580027438.01.T01
Gene Sequence

>MsG0580027438.01.T01

ATGAATTATAGTATTAGTGAGCCCTTCATTAATGGGCAAGCAGTTCCATATGATCCCAAGTATCCTGAGGAGTGGTTTAGAAACAATGCTCGTGCTAATGAAAGGTACAGGCGCAATGATAGGCCTGGTGTGATAAGCATTGATTGTGGGGTAAGTGAAAGTTACAAGGATAACACAAACAATTTTCCATATCAAGCTGATGATAACACCGTCGTCCGGTTTGGTCAAACCAGGAATATATCATCAGATAATGAAGTTTCCTATGAAAGTCAGATTAAGAAGCAATTGAAGTCATTGAGAAATTTTCCAGATGGGAAGAGGAATTGTTATAACTTAAAACCTAAACAGGGAAAAAACCACAAATATAGCACAAGGGCTTATTTTCAATATGGAAACTATGACAACAAAAATAAAATACCAACTTTTGATCTGCATCTTGGAGTCAATCTTTGGGAGCAAGTACAACTGAGTTCAGCTACAGGCGTTTTACGTACCGAGCAGGCCTGGCTATGTTTCCAAAGTTAA
Protein sequence

>MsG0580027438.01.T01

MNYSISEPFINGQAVPYDPKYPEEWFRNNARANERYRRNDRPGVISIDCGVSESYKDNTNNFPYQADDNTVVRFGQTRNISSDNEVSYESQIKKQLKSLRNFPDGKRNCYNLKPKQGKNHKYSTRAYFQYGNYDNKNKIPTFDLHLGVNLWEQVQLSSATGVLRTEQAWLCFQS*