Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036014.01.T01 | XP_024626026.2 | 60.377 | 530 | 126 | 13 | 3 | 477 | 1 | 501 | 0 | 533 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036014.01.T01 | O49711 | 36.224 | 196 | 120 | 4 | 94 | 286 | 153 | 346 | 1.02E-24 | 111 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036014.01.T01 | A0A396GXC2 | 73.196 | 291 | 63 | 7 | 3 | 286 | 1 | 283 | 6.80e-131 | 395 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048065.01 | MsG0780036014.01 | 0.805847 | 1.095268e-49 | 5.856040e-47 |
| MsG0080048826.01 | MsG0780036014.01 | 0.801068 | 1.071655e-48 | 5.070529e-46 |
| MsG0080048849.01 | MsG0780036014.01 | 0.814236 | 1.707366e-51 | 1.139384e-48 |
| MsG0080049069.01 | MsG0780036014.01 | 0.805661 | 1.198392e-49 | 6.376706e-47 |
| MsG0180000599.01 | MsG0780036014.01 | 0.810553 | 1.088782e-50 | 6.582997e-48 |
| MsG0180001100.01 | MsG0780036014.01 | 0.808637 | 2.808349e-50 | 1.614025e-47 |
| MsG0180002024.01 | MsG0780036014.01 | 0.801812 | 7.545763e-49 | 3.637890e-46 |
| MsG0180002399.01 | MsG0780036014.01 | 0.818479 | 1.918758e-52 | 1.437926e-49 |
| MsG0180004103.01 | MsG0780036014.01 | 0.806365 | 8.523079e-50 | 4.617374e-47 |
| MsG0180004390.01 | MsG0780036014.01 | 0.825703 | 4.056282e-54 | 3.725352e-51 |
| MsG0180004493.01 | MsG0780036014.01 | 0.817739 | 2.820005e-52 | 2.070795e-49 |
| MsG0180004500.01 | MsG0780036014.01 | 0.807916 | 4.000749e-50 | 2.256166e-47 |
| MsG0180005220.01 | MsG0780036014.01 | 0.823345 | 1.456297e-53 | 1.250543e-50 |
| MsG0180005240.01 | MsG0780036014.01 | 0.842760 | 2.123458e-58 | 3.251874e-55 |
| MsG0180006096.01 | MsG0780036014.01 | 0.822839 | 1.910892e-53 | 1.617799e-50 |
| MsG0280010916.01 | MsG0780036014.01 | 0.801113 | 1.049628e-48 | 4.971767e-46 |
| MsG0280011255.01 | MsG0780036014.01 | 0.842568 | 2.389013e-58 | 3.637065e-55 |
| MsG0280011415.01 | MsG0780036014.01 | 0.803395 | 3.557997e-49 | 1.786017e-46 |
| MsG0380012005.01 | MsG0780036014.01 | 0.834263 | 3.317026e-56 | 3.915838e-53 |
| MsG0380012011.01 | MsG0780036014.01 | 0.820808 | 5.639860e-53 | 4.508744e-50 |
| MsG0380012374.01 | MsG0780036014.01 | 0.804959 | 1.681549e-49 | 8.787955e-47 |
| MsG0380014240.01 | MsG0780036014.01 | 0.803219 | 3.870280e-49 | 1.933974e-46 |
| MsG0380014727.01 | MsG0780036014.01 | 0.828349 | 9.444706e-55 | 9.363164e-52 |
| MsG0680030858.01 | MsG0780036014.01 | 0.808865 | 2.510187e-50 | 1.451407e-47 |
| MsG0680031561.01 | MsG0780036014.01 | 0.822930 | 1.819678e-53 | 1.544558e-50 |
| MsG0680032827.01 | MsG0780036014.01 | 0.826306 | 2.917215e-54 | 2.725475e-51 |
| MsG0680032830.01 | MsG0780036014.01 | 0.809273 | 2.053190e-50 | 1.200194e-47 |
| MsG0680032832.01 | MsG0780036014.01 | 0.824314 | 8.634390e-54 | 7.620203e-51 |
| MsG0680033465.01 | MsG0780036014.01 | 0.823698 | 1.203955e-53 | 1.044480e-50 |
| MsG0480018584.01 | MsG0780036014.01 | 0.812303 | 4.537767e-51 | 2.874746e-48 |
| MsG0480018911.01 | MsG0780036014.01 | 0.819067 | 1.411196e-52 | 1.074822e-49 |
| MsG0480019408.01 | MsG0780036014.01 | 0.822394 | 2.425423e-53 | 2.027696e-50 |
| MsG0480020024.01 | MsG0780036014.01 | 0.863487 | 2.404106e-64 | 7.299652e-61 |
| MsG0480020025.01 | MsG0780036014.01 | 0.805530 | 1.276950e-49 | 6.771523e-47 |
| MsG0480021160.01 | MsG0780036014.01 | 0.801116 | 1.048072e-48 | 4.964856e-46 |
| MsG0480021869.01 | MsG0780036014.01 | 0.824162 | 9.370708e-54 | 8.235331e-51 |
| MsG0480022624.01 | MsG0780036014.01 | 0.812486 | 4.139259e-51 | 2.635217e-48 |
| MsG0480023073.01 | MsG0780036014.01 | 0.815675 | 8.188091e-52 | 5.682265e-49 |
| MsG0480023660.01 | MsG0780036014.01 | 0.811169 | 8.007725e-51 | 4.921686e-48 |
| MsG0580024790.01 | MsG0780036014.01 | -0.816867 | 4.432593e-52 | 3.177990e-49 |
| MsG0580025059.01 | MsG0780036014.01 | 0.827130 | 1.854385e-54 | 1.774131e-51 |
| MsG0380015372.01 | MsG0780036014.01 | 0.852433 | 4.631518e-61 | 9.676342e-58 |
| MsG0380015784.01 | MsG0780036014.01 | 0.801719 | 7.885827e-49 | 3.792733e-46 |
| MsG0380016540.01 | MsG0780036014.01 | 0.800233 | 1.586677e-48 | 7.349566e-46 |
| MsG0380016740.01 | MsG0780036014.01 | 0.836277 | 1.028328e-56 | 1.289835e-53 |
| MsG0380017085.01 | MsG0780036014.01 | 0.807133 | 5.866406e-50 | 3.241561e-47 |
| MsG0380017126.01 | MsG0780036014.01 | 0.803362 | 3.614052e-49 | 1.812516e-46 |
| MsG0380017202.01 | MsG0780036014.01 | 0.814234 | 1.709413e-51 | 1.140673e-48 |
| MsG0380017931.01 | MsG0780036014.01 | 0.843658 | 1.223748e-58 | 1.928133e-55 |
| MsG0480018402.01 | MsG0780036014.01 | 0.819495 | 1.127085e-52 | 8.687430e-50 |
| MsG0580027438.01 | MsG0780036014.01 | 0.803331 | 3.667953e-49 | 1.838144e-46 |
| MsG0580028630.01 | MsG0780036014.01 | 0.817801 | 2.731676e-52 | 2.009277e-49 |
| MsG0580029879.01 | MsG0780036014.01 | 0.815329 | 9.775478e-52 | 6.719622e-49 |
| MsG0680030313.01 | MsG0780036014.01 | 0.800921 | 1.148657e-48 | 5.414579e-46 |
| MsG0680030515.01 | MsG0780036014.01 | 0.814959 | 1.180847e-51 | 8.035604e-49 |
| MsG0680030616.01 | MsG0780036014.01 | 0.802488 | 5.477950e-49 | 2.686746e-46 |
| MsG0680030636.01 | MsG0780036014.01 | 0.811581 | 6.518793e-51 | 4.050343e-48 |
| MsG0280007307.01 | MsG0780036014.01 | 0.828148 | 1.056342e-54 | 1.041153e-51 |
| MsG0280007575.01 | MsG0780036014.01 | 0.813968 | 1.956803e-51 | 1.296360e-48 |
| MsG0280007903.01 | MsG0780036014.01 | 0.803764 | 2.983614e-49 | 1.511946e-46 |
| MsG0280008928.01 | MsG0780036014.01 | 0.804623 | 1.976180e-49 | 1.023775e-46 |
| MsG0280008929.01 | MsG0780036014.01 | 0.819322 | 1.234422e-52 | 9.467689e-50 |
| MsG0280009256.01 | MsG0780036014.01 | 0.844705 | 6.407402e-59 | 1.043129e-55 |
| MsG0280010288.01 | MsG0780036014.01 | 0.811989 | 5.312416e-51 | 3.336875e-48 |
| MsG0280010517.01 | MsG0780036014.01 | 0.819811 | 9.547293e-53 | 7.424185e-50 |
| MsG0680035859.01 | MsG0780036014.01 | 0.801836 | 7.459688e-49 | 3.598640e-46 |
| MsG0780036014.01 | MsG0780036029.01 | 0.869522 | 2.907705e-66 | 1.094763e-62 |
| MsG0780036014.01 | MsG0780036183.01 | 0.816419 | 5.585711e-52 | 3.955715e-49 |
| MsG0780036014.01 | MsG0780036517.01 | 0.805574 | 1.249829e-49 | 6.635393e-47 |
| MsG0780036014.01 | MsG0780036659.01 | 0.802868 | 4.572739e-49 | 2.264667e-46 |
| MsG0780036014.01 | MsG0780037330.01 | 0.804503 | 2.093902e-49 | 1.081376e-46 |
| MsG0780036014.01 | MsG0780037701.01 | 0.822930 | 1.819678e-53 | 1.544558e-50 |
| MsG0780036014.01 | MsG0780038907.01 | 0.806318 | 8.720074e-50 | 4.718490e-47 |
| MsG0780036014.01 | MsG0780039178.01 | 0.808781 | 2.615994e-50 | 1.509176e-47 |
| MsG0780036014.01 | MsG0780041387.01 | 0.809119 | 2.214805e-50 | 1.289379e-47 |
| MsG0780036014.01 | MsG0780041747.01 | 0.822719 | 2.037463e-53 | 1.719125e-50 |
| MsG0780036014.01 | MsG0880041852.01 | 0.809925 | 1.486984e-50 | 8.843787e-48 |
| MsG0780036014.01 | MsG0880042022.01 | 0.804578 | 2.019416e-49 | 1.044983e-46 |
| MsG0780036014.01 | MsG0880043837.01 | 0.800922 | 1.148086e-48 | 5.412053e-46 |
| MsG0780036014.01 | MsG0880043955.01 | 0.803276 | 3.765793e-49 | 1.884521e-46 |
| MsG0780036014.01 | MsG0880044036.01 | 0.804259 | 2.353629e-49 | 1.207930e-46 |
| MsG0780036014.01 | MsG0880045992.01 | 0.813632 | 2.320391e-51 | 1.523303e-48 |
| MsG0780036014.01 | MsG0880047267.01 | 0.817429 | 3.312388e-52 | 2.411790e-49 |
| MsG0780036014.01 | MsG0880047394.01 | 0.810199 | 1.297954e-50 | 7.774654e-48 |
| MsG0780036014.01 | MsG0880047481.01 | -0.806744 | 7.089337e-50 | 3.878167e-47 |
| MsG0780036014.01 | MsG0880047696.01 | 0.806275 | 8.901517e-50 | 4.811699e-47 |
| MsG0780036014.01 | MsG0880047754.01 | 0.826287 | 2.946405e-54 | 2.751366e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036014.01.T01 | MTR_7g007510 | 73.196 | 291 | 63 | 7 | 3 | 286 | 1 | 283 | 9.37e-131 | 394 |
| MsG0780036014.01.T01 | MTR_7g007510 | 63.721 | 215 | 58 | 2 | 288 | 482 | 368 | 582 | 9.92e-74 | 245 |
| MsG0780036014.01.T01 | MTR_7g025530 | 76.562 | 192 | 25 | 3 | 306 | 477 | 338 | 529 | 9.08e-84 | 272 |
| MsG0780036014.01.T01 | MTR_7g025530 | 74.825 | 143 | 32 | 3 | 149 | 287 | 1 | 143 | 6.19e-55 | 195 |
| MsG0780036014.01.T01 | MTR_7g025580 | 76.720 | 189 | 24 | 3 | 305 | 473 | 344 | 532 | 3.75e-83 | 271 |
| MsG0780036014.01.T01 | MTR_7g025580 | 57.383 | 298 | 64 | 9 | 2 | 287 | 1 | 247 | 3.50e-81 | 266 |
| MsG0780036014.01.T01 | MTR_4g081220 | 45.882 | 255 | 121 | 6 | 36 | 286 | 103 | 344 | 8.43e-54 | 194 |
| MsG0780036014.01.T01 | MTR_4g081220 | 44.848 | 165 | 63 | 4 | 341 | 481 | 551 | 711 | 3.09e-28 | 119 |
| MsG0780036014.01.T01 | MTR_2g082940 | 41.038 | 212 | 115 | 4 | 83 | 286 | 130 | 339 | 2.70e-40 | 149 |
| MsG0780036014.01.T01 | MTR_2g082940 | 41.038 | 212 | 115 | 4 | 83 | 286 | 130 | 339 | 2.04e-39 | 149 |
| MsG0780036014.01.T01 | MTR_4g081210 | 39.179 | 268 | 146 | 6 | 22 | 284 | 49 | 304 | 2.82e-39 | 149 |
| MsG0780036014.01.T01 | MTR_4g133410 | 36.735 | 147 | 42 | 5 | 338 | 475 | 145 | 249 | 1.95e-14 | 73.9 |
| MsG0780036014.01.T01 | MTR_4g133410 | 36.735 | 147 | 42 | 5 | 338 | 475 | 279 | 383 | 1.99e-14 | 75.9 |
| MsG0780036014.01.T01 | MTR_4g133410 | 36.735 | 147 | 42 | 5 | 338 | 475 | 145 | 249 | 2.28e-14 | 75.1 |
| MsG0780036014.01.T01 | MTR_4g133410 | 36.735 | 147 | 42 | 5 | 338 | 475 | 279 | 383 | 2.31e-14 | 75.1 |
| MsG0780036014.01.T01 | MTR_8g070020 | 36.054 | 147 | 43 | 5 | 338 | 475 | 265 | 369 | 1.10e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036014.01.T01 | AT4G21880 | 36.224 | 196 | 120 | 4 | 94 | 286 | 109 | 302 | 9.47e-26 | 111 |
| MsG0780036014.01.T01 | AT4G21880 | 32.258 | 155 | 100 | 2 | 283 | 432 | 445 | 599 | 1.69e-18 | 89.4 |
| MsG0780036014.01.T01 | AT4G21880 | 36.224 | 196 | 120 | 4 | 94 | 286 | 153 | 346 | 1.04e-25 | 111 |
| MsG0780036014.01.T01 | AT4G21880 | 32.258 | 155 | 100 | 2 | 283 | 432 | 489 | 643 | 1.56e-18 | 89.4 |
| MsG0780036014.01.T01 | AT4G04790 | 34.659 | 176 | 109 | 3 | 115 | 286 | 17 | 190 | 1.18e-21 | 99.0 |
| MsG0780036014.01.T01 | AT4G04790 | 45.556 | 90 | 49 | 0 | 341 | 430 | 395 | 484 | 1.00e-17 | 86.7 |
| MsG0780036014.01.T01 | AT4G04790 | 34.659 | 176 | 109 | 3 | 115 | 286 | 150 | 323 | 2.35e-21 | 98.2 |
| MsG0780036014.01.T01 | AT4G04790 | 45.556 | 90 | 49 | 0 | 341 | 430 | 528 | 617 | 6.95e-18 | 87.4 |
| MsG0780036014.01.T01 | AT4G04790 | 34.659 | 176 | 109 | 3 | 115 | 286 | 154 | 327 | 2.45e-21 | 98.2 |
| MsG0780036014.01.T01 | AT4G04790 | 45.556 | 90 | 49 | 0 | 341 | 430 | 532 | 621 | 6.97e-18 | 87.4 |
Find 85 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAATGATTTGAATATATT+TGG | 0.118381 | 7:+1321291 | None:intergenic |
| ATGAGACATAAAACAGCTTT+AGG | 0.230687 | 7:+1319034 | None:intergenic |
| AGAGAAATGGAAAGATTTAC+TGG | 0.236755 | 7:-1319532 | MsG0780036014.01.T01:CDS |
| AAGCTGCATATGCATGAATA+AGG | 0.283092 | 7:+1319314 | None:intergenic |
| ATCATGGAGTTTGCGGGATA+AGG | 0.338847 | 7:+1322052 | None:intergenic |
| TCATGGAGTTTGCGGGATAA+GGG | 0.345273 | 7:+1322053 | None:intergenic |
| CACGTGCATGGTTCGTCAAT+AGG | 0.357692 | 7:-1321852 | MsG0780036014.01.T01:CDS |
| TGGAAAGATTTACTGGCTTT+CGG | 0.360154 | 7:-1319525 | MsG0780036014.01.T01:CDS |
| TCCTTTGGTTAGGAAGCTTC+AGG | 0.365914 | 7:-1322027 | MsG0780036014.01.T01:CDS |
| ATCAAAATCAATTTCACGAT+TGG | 0.371432 | 7:-1321595 | MsG0780036014.01.T01:CDS |
| TGAGACATAAAACAGCTTTA+GGG | 0.371595 | 7:+1319035 | None:intergenic |
| TGACCGCAAGGAACAGATTT+CGG | 0.378912 | 7:-1321364 | MsG0780036014.01.T01:CDS |
| CGGAGTTGAGTGGCGAAGAT+TGG | 0.387939 | 7:-1318880 | MsG0780036014.01.T01:CDS |
| TCTAGTAGTTCTAGTTGAAC+TGG | 0.394877 | 7:+1321714 | None:intergenic |
| CAAACTCCATGATGCTCCTT+TGG | 0.394942 | 7:-1322042 | MsG0780036014.01.T01:CDS |
| ACGTGCATGGTTCGTCAATA+GGG | 0.398829 | 7:-1321851 | MsG0780036014.01.T01:CDS |
| ATCTAGCTACCTCGTAAATC+AGG | 0.400353 | 7:+1321486 | None:intergenic |
| AGTGGCGAAGATTGGGTTCA+AGG | 0.406061 | 7:-1318872 | MsG0780036014.01.T01:CDS |
| TCAAAATCAATTTCACGATT+GGG | 0.414365 | 7:-1321594 | MsG0780036014.01.T01:CDS |
| CCAAATATATTCAAATCATT+AGG | 0.418611 | 7:-1321291 | MsG0780036014.01.T01:CDS |
| ACAGCGATGGCGACTTAAGA+TGG | 0.421072 | 7:+1319565 | None:intergenic |
| GGTTCGTCAATAGGGTTGGC+GGG | 0.430110 | 7:-1321843 | MsG0780036014.01.T01:CDS |
| ATGACATGTTGATGTGGATA+AGG | 0.432395 | 7:-1321566 | MsG0780036014.01.T01:CDS |
| TGAATTTGAGAAAGCAAAAC+AGG | 0.437605 | 7:-1319287 | MsG0780036014.01.T01:intron |
| TCAATTATATACTTGAGAAC+TGG | 0.442797 | 7:+1321678 | None:intergenic |
| AGGAGCATCATGGAGTTTGC+GGG | 0.446925 | 7:+1322046 | None:intergenic |
| TGTTACGATTTCAAGAGAAA+TGG | 0.449336 | 7:-1319545 | MsG0780036014.01.T01:CDS |
| GTCTCATCTCTTGCATCGCA+CGG | 0.453769 | 7:-1319118 | MsG0780036014.01.T01:CDS |
| GGAGTTGAGTGGCGAAGATT+GGG | 0.455800 | 7:-1318879 | MsG0780036014.01.T01:CDS |
| ATTTCAATTAACCACTTCAC+TGG | 0.456205 | 7:+1319154 | None:intergenic |
| AAAACCGTGGCTTGGTATAG+AGG | 0.456767 | 7:-1321955 | MsG0780036014.01.T01:CDS |
| ATAATTGACATGGGAGATGT+TGG | 0.464588 | 7:-1321663 | MsG0780036014.01.T01:CDS |
| GAGTTGTTTACACATTTCAA+TGG | 0.467573 | 7:+1318724 | None:intergenic |
| TGACATGTTGATGTGGATAA+GGG | 0.469858 | 7:-1321565 | MsG0780036014.01.T01:CDS |
| TCCATGATGCTCCTTTGGTT+AGG | 0.480282 | 7:-1322037 | MsG0780036014.01.T01:CDS |
| AAGGAGCATCATGGAGTTTG+CGG | 0.481975 | 7:+1322045 | None:intergenic |
| ATTCATGCATATGCAGCTTA+CGG | 0.482741 | 7:-1319310 | MsG0780036014.01.T01:CDS |
| TTCACAAGCATCGCGGATCA+TGG | 0.485679 | 7:+1321530 | None:intergenic |
| TTGGAGGAAATCAAGAAAGC+TGG | 0.486524 | 7:-1319070 | MsG0780036014.01.T01:CDS |
| TTGTTGTTGTTGCTCATCAA+TGG | 0.495194 | 7:+1321929 | None:intergenic |
| TTGGGTTCAAGGTTGCGAAA+TGG | 0.497922 | 7:-1318861 | MsG0780036014.01.T01:CDS |
| CTTGTAGTATTATGAAGAGA+TGG | 0.501640 | 7:-1319377 | MsG0780036014.01.T01:intron |
| ATAGAGAAGGCTAGGTCGAC+CGG | 0.503178 | 7:-1321795 | MsG0780036014.01.T01:CDS |
| TGGTTCGTCAATAGGGTTGG+CGG | 0.505721 | 7:-1321844 | MsG0780036014.01.T01:CDS |
| AGTTTGCGGGATAAGGGGAT+AGG | 0.518584 | 7:+1322059 | None:intergenic |
| AGCTGCATATGCATGAATAA+GGG | 0.521597 | 7:+1319315 | None:intergenic |
| GTTCGTATGATTCACGTGCA+TGG | 0.522678 | 7:-1321864 | MsG0780036014.01.T01:CDS |
| TAGCGAAATGCATTTATCTC+CGG | 0.528257 | 7:+1321776 | None:intergenic |
| TGAAATGTGTAAACAACTCA+AGG | 0.548334 | 7:-1318720 | MsG0780036014.01.T01:CDS |
| CTCCAACAAAACAAGTGCCT+CGG | 0.548587 | 7:+1319087 | None:intergenic |
| TCTCATCTCTTGCATCGCAC+GGG | 0.553949 | 7:-1319117 | MsG0780036014.01.T01:CDS |
| CATGGAGTTTGCGGGATAAG+GGG | 0.554493 | 7:+1322054 | None:intergenic |
| AAGGTTGCGAAATGGTTCTC+CGG | 0.558669 | 7:-1318853 | MsG0780036014.01.T01:intron |
| TCCTAACCAAAGGAGCATCA+TGG | 0.558867 | 7:+1322036 | None:intergenic |
| GCATGGTTCGTCAATAGGGT+TGG | 0.569367 | 7:-1321847 | MsG0780036014.01.T01:CDS |
| TCCTGAAGCTTCCTAACCAA+AGG | 0.572068 | 7:+1322026 | None:intergenic |
| AGTGAAACTGTTGATAGAGA+AGG | 0.583792 | 7:-1321808 | MsG0780036014.01.T01:CDS |
| CGCCACTCAACTCCGTGCAT+AGG | 0.587396 | 7:+1318888 | None:intergenic |
| TCTTGAAATCGTAACAGCGA+TGG | 0.589302 | 7:+1319552 | None:intergenic |
| GTTTGCGGGATAAGGGGATA+GGG | 0.594528 | 7:+1322060 | None:intergenic |
| AACTGTTGATAGAGAAGGCT+AGG | 0.594724 | 7:-1321803 | MsG0780036014.01.T01:CDS |
| ATATATTCAAATCATTAGGA+AGG | 0.598188 | 7:-1321287 | MsG0780036014.01.T01:CDS |
| TCTCAAGTATATAATTGACA+TGG | 0.601253 | 7:-1321673 | MsG0780036014.01.T01:CDS |
| GAGGGGTCTTCTCCTATGCA+CGG | 0.607359 | 7:-1318900 | MsG0780036014.01.T01:CDS |
| GTTCGTCAATAGGGTTGGCG+GGG | 0.611039 | 7:-1321842 | MsG0780036014.01.T01:CDS |
| TCGTGGATAAAACCGTGGCT+TGG | 0.611372 | 7:-1321963 | MsG0780036014.01.T01:CDS |
| CTCCTATGCACGGAGTTGAG+TGG | 0.612631 | 7:-1318890 | MsG0780036014.01.T01:CDS |
| GAACTACTAGAAGAAACATA+CGG | 0.613565 | 7:-1321702 | MsG0780036014.01.T01:CDS |
| AAACCGTGGCTTGGTATAGA+GGG | 0.625050 | 7:-1321954 | MsG0780036014.01.T01:CDS |
| CTCAAGTATATAATTGACAT+GGG | 0.627703 | 7:-1321672 | MsG0780036014.01.T01:CDS |
| GATATTATGACATGTTGATG+TGG | 0.628796 | 7:-1321572 | MsG0780036014.01.T01:CDS |
| TACTAACAAGGAAACAATCG+TGG | 0.629927 | 7:-1321980 | MsG0780036014.01.T01:CDS |
| ATCAACGCATACCAGTGAAG+TGG | 0.634142 | 7:-1319165 | MsG0780036014.01.T01:CDS |
| TCTTTGTGAAAGTGACCGCA+AGG | 0.652375 | 7:-1321376 | MsG0780036014.01.T01:CDS |
| AACAATCGTGGATAAAACCG+TGG | 0.677928 | 7:-1321968 | MsG0780036014.01.T01:CDS |
| GTACCCTCTATACCAAGCCA+CGG | 0.678898 | 7:+1321951 | None:intergenic |
| GTGAATCATACGAACAAGAG+TGG | 0.680474 | 7:+1321872 | None:intergenic |
| GCTTGTGAATATATTACTAG+CGG | 0.681296 | 7:-1321516 | MsG0780036014.01.T01:CDS |
| GTGGATAAGGGTTAATGACG+AGG | 0.682278 | 7:-1321553 | MsG0780036014.01.T01:CDS |
| AAGGCTACAGTTGAAATCCG+AGG | 0.686595 | 7:-1321268 | MsG0780036014.01.T01:CDS |
| CATCCGAAATCTGTTCCTTG+CGG | 0.691792 | 7:+1321361 | None:intergenic |
| TGAGACAAGAGTTACTAACA+AGG | 0.717001 | 7:-1321992 | MsG0780036014.01.T01:CDS |
| TAATATATTCACAAGCATCG+CGG | 0.734372 | 7:+1321523 | None:intergenic |
| ATCGCACGGGAAATTCTCCG+AGG | 0.760843 | 7:-1319104 | MsG0780036014.01.T01:CDS |
| GGAAGCATACCTGATTTACG+AGG | 0.775549 | 7:-1321495 | MsG0780036014.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATCATACTTTAATAT+TGG | + | Chr7:1322031-1322050 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAATATATGGTA+AGG | + | Chr7:1320979-1320998 | None:intergenic | 10.0% |
| !! | TAAAATCATACTTTAATATT+GGG | + | Chr7:1322030-1322049 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTTTTAAACAAG+AGG | - | Chr7:1320985-1321004 | MsG0780036014.01.T01:intron | 10.0% |
| !! | AAAACACAATAACATAATAA+TGG | + | Chr7:1319607-1319626 | None:intergenic | 15.0% |
| !!! | AATTTCTTTTAGAATACTTA+GGG | - | Chr7:1318917-1318936 | MsG0780036014.01.T01:intron | 15.0% |
| !!! | TTGCTATTTCAATTTTATTA+CGG | - | Chr7:1319579-1319598 | MsG0780036014.01.T01:CDS | 15.0% |
| !! | AAAGAAAGAAAGAAAAAAAC+AGG | + | Chr7:1320456-1320475 | None:intergenic | 20.0% |
| !! | AAGAAAGAAAGAAAAAAACA+GGG | + | Chr7:1320455-1320474 | None:intergenic | 20.0% |
| !! | AAGATAGAATTTGATCTAAA+GGG | + | Chr7:1320225-1320244 | None:intergenic | 20.0% |
| !! | ATAAATAGTGAAGTAACTAT+GGG | - | Chr7:1321150-1321169 | MsG0780036014.01.T01:intron | 20.0% |
| !! | ATACAATGAACATAAACAAA+TGG | + | Chr7:1322058-1322077 | None:intergenic | 20.0% |
| !! | ATATATTCAAATCATTAGGA+AGG | - | Chr7:1319529-1319548 | MsG0780036014.01.T01:CDS | 20.0% |
| !! | CATAATATGAGAATGAATAA+AGG | + | Chr7:1320133-1320152 | None:intergenic | 20.0% |
| !! | CCAAATATATTCAAATCATT+AGG | - | Chr7:1319525-1319544 | MsG0780036014.01.T01:CDS | 20.0% |
| !! | CCTAATGATTTGAATATATT+TGG | + | Chr7:1319528-1319547 | None:intergenic | 20.0% |
| !! | CTTTATTCATTCTCATATTA+TGG | - | Chr7:1320131-1320150 | MsG0780036014.01.T01:intron | 20.0% |
| !! | GAAAAACTATAAGAATTGTT+AGG | - | Chr7:1320719-1320738 | MsG0780036014.01.T01:intron | 20.0% |
| !! | TAAAAAAGATGGTAGAAAAT+AGG | - | Chr7:1320593-1320612 | MsG0780036014.01.T01:intron | 20.0% |
| !! | TTTGAAAACTGAAATTCTAA+AGG | + | Chr7:1319652-1319671 | None:intergenic | 20.0% |
| !!! | ACAATTCTTATAGTTTTTCT+AGG | + | Chr7:1320718-1320737 | None:intergenic | 20.0% |
| !!! | ATAATTTTTTGGTAACTTCA+CGG | - | Chr7:1319988-1320007 | MsG0780036014.01.T01:intron | 20.0% |
| !!! | ATGTAAGTGTAAAAGTTTTA+GGG | + | Chr7:1321080-1321099 | None:intergenic | 20.0% |
| !!! | GAAAGCATACATTAAAAAAA+AGG | + | Chr7:1321353-1321372 | None:intergenic | 20.0% |
| !!! | GAATTTCTTTTAGAATACTT+AGG | - | Chr7:1318916-1318935 | MsG0780036014.01.T01:intron | 20.0% |
| !!! | TATGTAAGTGTAAAAGTTTT+AGG | + | Chr7:1321081-1321100 | None:intergenic | 20.0% |
| !!! | TCATTTTCTATTGAAAATCA+AGG | - | Chr7:1321213-1321232 | MsG0780036014.01.T01:intron | 20.0% |
| !!! | TTTTTCTTTTTAACTTATGC+AGG | - | Chr7:1320289-1320308 | MsG0780036014.01.T01:intron | 20.0% |
| ! | AAATTACAGAAATGGGAAAA+AGG | + | Chr7:1321119-1321138 | None:intergenic | 25.0% |
| ! | AATTGTTAGGAAAGATTTAG+AGG | - | Chr7:1320732-1320751 | MsG0780036014.01.T01:intron | 25.0% |
| ! | ATCAAAATCAATTTCACGAT+TGG | - | Chr7:1319221-1319240 | MsG0780036014.01.T01:intron | 25.0% |
| ! | ATTTCTCGAAATTACAGAAA+TGG | + | Chr7:1321127-1321146 | None:intergenic | 25.0% |
| ! | CATAAATAGTGAAGTAACTA+TGG | - | Chr7:1321149-1321168 | MsG0780036014.01.T01:intron | 25.0% |
| ! | CGGTTCAATACAAAAATTTA+AGG | - | Chr7:1321990-1322009 | MsG0780036014.01.T01:CDS | 25.0% |
| ! | CTCAAGTATATAATTGACAT+GGG | - | Chr7:1319144-1319163 | MsG0780036014.01.T01:CDS | 25.0% |
| ! | GAAGATAGAATTTGATCTAA+AGG | + | Chr7:1320226-1320245 | None:intergenic | 25.0% |
| ! | GATGTGTTATGTAATTTACA+CGG | - | Chr7:1321884-1321903 | MsG0780036014.01.T01:CDS | 25.0% |
| ! | TCAAAATCAATTTCACGATT+GGG | - | Chr7:1319222-1319241 | MsG0780036014.01.T01:intron | 25.0% |
| ! | TCAATTATATACTTGAGAAC+TGG | + | Chr7:1319141-1319160 | None:intergenic | 25.0% |
| ! | TCTCAAGTATATAATTGACA+TGG | - | Chr7:1319143-1319162 | MsG0780036014.01.T01:CDS | 25.0% |
| ! | TGGTTTATGATAAAACACTA+TGG | - | Chr7:1320776-1320795 | MsG0780036014.01.T01:intron | 25.0% |
| ! | TTTCATTAAGATAAGCATCT+TGG | + | Chr7:1319370-1319389 | None:intergenic | 25.0% |
| ! | TTTCTCGAAATTACAGAAAT+GGG | + | Chr7:1321126-1321145 | None:intergenic | 25.0% |
| !! | AATAACCTGTAGTTTTTGAA+GGG | + | Chr7:1318677-1318696 | None:intergenic | 25.0% |
| !! | ACAATGATTGATGAGTTTTA+AGG | + | Chr7:1321854-1321873 | None:intergenic | 25.0% |
| !! | CAGAAACTAATAAGATTTTC+AGG | - | Chr7:1320402-1320421 | MsG0780036014.01.T01:intron | 25.0% |
| !! | GTTTTATCATAAACCATATC+TGG | + | Chr7:1320772-1320791 | None:intergenic | 25.0% |
| !! | TAATAACCTGTAGTTTTTGA+AGG | + | Chr7:1318678-1318697 | None:intergenic | 25.0% |
| !!! | ATGAGTTTTAAGGTTTAAAG+TGG | + | Chr7:1321844-1321863 | None:intergenic | 25.0% |
| !!! | TCTACCATCTTTTTTACTAT+AGG | + | Chr7:1320589-1320608 | None:intergenic | 25.0% |
| !!! | TGCAAAACTTGTTTTATGAT+GGG | + | Chr7:1319841-1319860 | None:intergenic | 25.0% |
| !!! | TGTAAGTGTAAAAGTTTTAG+GGG | + | Chr7:1321079-1321098 | None:intergenic | 25.0% |
| !!! | TTGCAAAACTTGTTTTATGA+TGG | + | Chr7:1319842-1319861 | None:intergenic | 25.0% |
| AAAGAGATTGAGAATTTGCA+TGG | - | Chr7:1320025-1320044 | MsG0780036014.01.T01:intron | 30.0% | |
| AGAGAAATGGAAAGATTTAC+TGG | - | Chr7:1321284-1321303 | MsG0780036014.01.T01:CDS | 30.0% | |
| AGCACCTATAGTAAAAAAGA+TGG | - | Chr7:1320582-1320601 | MsG0780036014.01.T01:intron | 30.0% | |
| ATCAATCATTGTACACTCTT+AGG | - | Chr7:1321862-1321881 | MsG0780036014.01.T01:CDS | 30.0% | |
| ATCACATCACATATCATCAA+GGG | + | Chr7:1319755-1319774 | None:intergenic | 30.0% | |
| ATGAGACATAAAACAGCTTT+AGG | + | Chr7:1321785-1321804 | None:intergenic | 30.0% | |
| ATTTCAATTAACCACTTCAC+TGG | + | Chr7:1321665-1321684 | None:intergenic | 30.0% | |
| CTGTTATTCTCCAAATTTAG+AGG | - | Chr7:1319692-1319711 | MsG0780036014.01.T01:intron | 30.0% | |
| CTTGTAGTATTATGAAGAGA+TGG | - | Chr7:1321439-1321458 | MsG0780036014.01.T01:intron | 30.0% | |
| GAACTACTAGAAGAAACATA+CGG | - | Chr7:1319114-1319133 | MsG0780036014.01.T01:CDS | 30.0% | |
| GAGTTGTTTACACATTTCAA+TGG | + | Chr7:1322095-1322114 | None:intergenic | 30.0% | |
| GATATTATGACATGTTGATG+TGG | - | Chr7:1319244-1319263 | MsG0780036014.01.T01:intron | 30.0% | |
| GCTTGTGAATATATTACTAG+CGG | - | Chr7:1319300-1319319 | MsG0780036014.01.T01:CDS | 30.0% | |
| TAGAACAACCTGTAATGTTA+AGG | + | Chr7:1321630-1321649 | None:intergenic | 30.0% | |
| TATCACATCACATATCATCA+AGG | + | Chr7:1319756-1319775 | None:intergenic | 30.0% | |
| TCTTTCTACAGTTTCTCTTT+CGG | - | Chr7:1321574-1321593 | MsG0780036014.01.T01:CDS | 30.0% | |
| TGAAATGTGTAAACAACTCA+AGG | - | Chr7:1322096-1322115 | MsG0780036014.01.T01:CDS | 30.0% | |
| TGAATTTGAGAAAGCAAAAC+AGG | - | Chr7:1321529-1321548 | MsG0780036014.01.T01:CDS | 30.0% | |
| TGAGACATAAAACAGCTTTA+GGG | + | Chr7:1321784-1321803 | None:intergenic | 30.0% | |
| TGTTACGATTTCAAGAGAAA+TGG | - | Chr7:1321271-1321290 | MsG0780036014.01.T01:CDS | 30.0% | |
| ! | TAATATATTCACAAGCATCG+CGG | + | Chr7:1319296-1319315 | None:intergenic | 30.0% |
| ! | TGTTATAGTTTTCCTTCTCA+TGG | + | Chr7:1320191-1320210 | None:intergenic | 30.0% |
| !! | TAAAGCTGTTTTATGTCTCA+TGG | - | Chr7:1321784-1321803 | MsG0780036014.01.T01:CDS | 30.0% |
| !!! | GTTTTAAGGTTTAAAGTGGA+AGG | + | Chr7:1321840-1321859 | None:intergenic | 30.0% |
| !!! | TTCTTTTTAACTTATGCAGG+TGG | - | Chr7:1320292-1320311 | MsG0780036014.01.T01:intron | 30.0% |
| AACAACAATCAAGCCTTAAG+TGG | + | Chr7:1320827-1320846 | None:intergenic | 35.0% | |
| AACATGCTATGTCCTTTACA+AGG | + | Chr7:1321605-1321624 | None:intergenic | 35.0% | |
| AAGCTGCATATGCATGAATA+AGG | + | Chr7:1321505-1321524 | None:intergenic | 35.0% | |
| AAGTTCGTCACCTCTAAATT+TGG | + | Chr7:1319705-1319724 | None:intergenic | 35.0% | |
| AGATGGTAGAAAATAGGCTA+AGG | - | Chr7:1320599-1320618 | MsG0780036014.01.T01:intron | 35.0% | |
| AGATTTAGAGGTTAACGAGT+TGG | - | Chr7:1320744-1320763 | MsG0780036014.01.T01:intron | 35.0% | |
| AGCTGCATATGCATGAATAA+GGG | + | Chr7:1321504-1321523 | None:intergenic | 35.0% | |
| AGTACAAAGAGTAGATCAGA+TGG | - | Chr7:1320660-1320679 | MsG0780036014.01.T01:intron | 35.0% | |
| ATAATTGACATGGGAGATGT+TGG | - | Chr7:1319153-1319172 | MsG0780036014.01.T01:CDS | 35.0% | |
| ATATGTGATGTGATACTGCA+AGG | - | Chr7:1319761-1319780 | MsG0780036014.01.T01:intron | 35.0% | |
| ATGAATGACACCATTAGAGA+GGG | - | Chr7:1320550-1320569 | MsG0780036014.01.T01:intron | 35.0% | |
| ATGACATGTTGATGTGGATA+AGG | - | Chr7:1319250-1319269 | MsG0780036014.01.T01:intron | 35.0% | |
| ATTCATGCATATGCAGCTTA+CGG | - | Chr7:1321506-1321525 | MsG0780036014.01.T01:CDS | 35.0% | |
| CAACATATAGTGCGAAGAAA+TGG | + | Chr7:1320494-1320513 | None:intergenic | 35.0% | |
| CATGTTGTCCTTAACATTAC+AGG | - | Chr7:1321619-1321638 | MsG0780036014.01.T01:CDS | 35.0% | |
| GCTGTATACAATACACCAAA+TGG | + | Chr7:1320957-1320976 | None:intergenic | 35.0% | |
| TACTAACAAGGAAACAATCG+TGG | - | Chr7:1318836-1318855 | MsG0780036014.01.T01:intron | 35.0% | |
| TAGCGAAATGCATTTATCTC+CGG | + | Chr7:1319043-1319062 | None:intergenic | 35.0% | |
| TATGAATGACACCATTAGAG+AGG | - | Chr7:1320549-1320568 | MsG0780036014.01.T01:intron | 35.0% | |
| TGACATGTTGATGTGGATAA+GGG | - | Chr7:1319251-1319270 | MsG0780036014.01.T01:intron | 35.0% | |
| TGAGACAAGAGTTACTAACA+AGG | - | Chr7:1318824-1318843 | MsG0780036014.01.T01:intron | 35.0% | |
| ! | AAATAGCAACTTTTCTGCCT+CGG | + | Chr7:1319568-1319587 | None:intergenic | 35.0% |
| ! | AAGTAGCTTTTCATACGTAG+AGG | + | Chr7:1320074-1320093 | None:intergenic | 35.0% |
| ! | AGTGAAACTGTTGATAGAGA+AGG | - | Chr7:1319008-1319027 | MsG0780036014.01.T01:intron | 35.0% |
| ! | CTGTTTTATGTCTCATGGTA+AGG | - | Chr7:1321789-1321808 | MsG0780036014.01.T01:CDS | 35.0% |
| ! | CTTTTCCCTTCAAAAACTAC+AGG | - | Chr7:1318669-1318688 | MsG0780036014.01.T01:CDS | 35.0% |
| ! | GTTGATAAAATGTGTGAAGC+AGG | - | Chr7:1320332-1320351 | MsG0780036014.01.T01:intron | 35.0% |
| ! | TTGTTGTTGTTGCTCATCAA+TGG | + | Chr7:1318890-1318909 | None:intergenic | 35.0% |
| ! | TTTTAGTATCGCTTTCTTGC+TGG | + | Chr7:1319908-1319927 | None:intergenic | 35.0% |
| ! | TTTTGTATTGAACCGAGTAC+CGG | + | Chr7:1321985-1322004 | None:intergenic | 35.0% |
| !! | CTGTAGTTTTTGAAGGGAAA+AGG | + | Chr7:1318671-1318690 | None:intergenic | 35.0% |
| !! | TCTAGTAGTTCTAGTTGAAC+TGG | + | Chr7:1319105-1319124 | None:intergenic | 35.0% |
| !! | TGGAAAGATTTACTGGCTTT+CGG | - | Chr7:1321291-1321310 | MsG0780036014.01.T01:CDS | 35.0% |
| !!! | AAGCTACTTTTGTATTGCTG+TGG | - | Chr7:1320085-1320104 | MsG0780036014.01.T01:intron | 35.0% |
| !!! | TGTTGCAGAAAGCTACTTTT+TGG | - | Chr7:1319416-1319435 | MsG0780036014.01.T01:intron | 35.0% |
| AAATATGCTCCAGCATGTGT+AGG | - | Chr7:1320913-1320932 | MsG0780036014.01.T01:intron | 40.0% | |
| AACAATCGTGGATAAAACCG+TGG | - | Chr7:1318848-1318867 | MsG0780036014.01.T01:intron | 40.0% | |
| AATATGCTCCAGCATGTGTA+GGG | - | Chr7:1320914-1320933 | MsG0780036014.01.T01:intron | 40.0% | |
| AATCAAGCCTTAAGTGGAGT+GGG | + | Chr7:1320821-1320840 | None:intergenic | 40.0% | |
| AATGTAACCCACTCCACTTA+AGG | - | Chr7:1320811-1320830 | MsG0780036014.01.T01:intron | 40.0% | |
| ACAAAGAGTAGATCAGATGG+AGG | - | Chr7:1320663-1320682 | MsG0780036014.01.T01:intron | 40.0% | |
| ACAACTTTACCATTGCTCCA+AGG | - | Chr7:1321051-1321070 | MsG0780036014.01.T01:intron | 40.0% | |
| ACACCATTAGAGAGGGATTT+GGG | - | Chr7:1320557-1320576 | MsG0780036014.01.T01:intron | 40.0% | |
| ATCTAGCTACCTCGTAAATC+AGG | + | Chr7:1319333-1319352 | None:intergenic | 40.0% | |
| CAAAAACTTCTTCTGCGAAG+TGG | + | Chr7:1321478-1321497 | None:intergenic | 40.0% | |
| GATGCAGGTGAAATTTCGAA+CGG | + | Chr7:1320052-1320071 | None:intergenic | 40.0% | |
| GTATTGCTGTGGTAAGAACA+AGG | - | Chr7:1320096-1320115 | MsG0780036014.01.T01:intron | 40.0% | |
| GTGAATCATACGAACAAGAG+TGG | + | Chr7:1318947-1318966 | None:intergenic | 40.0% | |
| TACAGATTGCATTTCCTGAC+TGG | + | Chr7:1320369-1320388 | None:intergenic | 40.0% | |
| TATATGTTGCGTTGGATGAG+TGG | - | Chr7:1320505-1320524 | MsG0780036014.01.T01:intron | 40.0% | |
| TCATACAGTCATCCATGAGA+AGG | - | Chr7:1320176-1320195 | MsG0780036014.01.T01:intron | 40.0% | |
| TCTTGAAATCGTAACAGCGA+TGG | + | Chr7:1321267-1321286 | None:intergenic | 40.0% | |
| TGGTAGAAAATAGGCTAAGG+TGG | - | Chr7:1320602-1320621 | MsG0780036014.01.T01:intron | 40.0% | |
| TTGGAGGAAATCAAGAAAGC+TGG | - | Chr7:1321746-1321765 | MsG0780036014.01.T01:CDS | 40.0% | |
| ! | AACTGTTGATAGAGAAGGCT+AGG | - | Chr7:1319013-1319032 | MsG0780036014.01.T01:intron | 40.0% |
| ! | TAACGAGTTGGATCCAGATA+TGG | - | Chr7:1320756-1320775 | MsG0780036014.01.T01:intron | 40.0% |
| ! | TTTTCATACGTAGAGGATGC+AGG | + | Chr7:1320067-1320086 | None:intergenic | 40.0% |
| !!! | TAAAAGTTTTAGGGGAGCCT+TGG | + | Chr7:1321071-1321090 | None:intergenic | 40.0% |
| AAGAGTAGATCAGATGGAGG+AGG | - | Chr7:1320666-1320685 | MsG0780036014.01.T01:intron | 45.0% | |
| AAGGCTACAGTTGAAATCCG+AGG | - | Chr7:1319548-1319567 | MsG0780036014.01.T01:CDS | 45.0% | |
| AAGGTTGCGAAATGGTTCTC+CGG | - | Chr7:1321963-1321982 | MsG0780036014.01.T01:CDS | 45.0% | |
| ACGTGCATGGTTCGTCAATA+GGG | - | Chr7:1318965-1318984 | MsG0780036014.01.T01:intron | 45.0% | |
| AGAGTAGATCAGATGGAGGA+GGG | - | Chr7:1320667-1320686 | MsG0780036014.01.T01:intron | 45.0% | |
| AGATTGCATTTCCTGACTGG+AGG | + | Chr7:1320366-1320385 | None:intergenic | 45.0% | |
| ATCAACGCATACCAGTGAAG+TGG | - | Chr7:1321651-1321670 | MsG0780036014.01.T01:CDS | 45.0% | |
| ATCATGGAGTTTGCGGGATA+AGG | + | Chr7:1318767-1318786 | None:intergenic | 45.0% | |
| ATTTACACGGCGAGTTGTAG+AGG | - | Chr7:1321897-1321916 | MsG0780036014.01.T01:CDS | 45.0% | |
| CAAACTCCATGATGCTCCTT+TGG | - | Chr7:1318774-1318793 | MsG0780036014.01.T01:intron | 45.0% | |
| CAATCAAGCCTTAAGTGGAG+TGG | + | Chr7:1320822-1320841 | None:intergenic | 45.0% | |
| CACCATTAGAGAGGGATTTG+GGG | - | Chr7:1320558-1320577 | MsG0780036014.01.T01:intron | 45.0% | |
| CATCCGAAATCTGTTCCTTG+CGG | + | Chr7:1319458-1319477 | None:intergenic | 45.0% | |
| CATGTGTAGGGACCAAGAAT+GGG | - | Chr7:1320926-1320945 | MsG0780036014.01.T01:intron | 45.0% | |
| CTCCAACAAAACAAGTGCCT+CGG | + | Chr7:1321732-1321751 | None:intergenic | 45.0% | |
| CTTCGCACTATATGTTGCGT+TGG | - | Chr7:1320497-1320516 | MsG0780036014.01.T01:intron | 45.0% | |
| CTTTCGGAGTGACCTTGTAA+AGG | - | Chr7:1321590-1321609 | MsG0780036014.01.T01:CDS | 45.0% | |
| GACACCATTAGAGAGGGATT+TGG | - | Chr7:1320556-1320575 | MsG0780036014.01.T01:intron | 45.0% | |
| GATGAGTGGTAAGACTAGAC+AGG | - | Chr7:1320519-1320538 | MsG0780036014.01.T01:intron | 45.0% | |
| GATTGCATTTCCTGACTGGA+GGG | + | Chr7:1320365-1320384 | None:intergenic | 45.0% | |
| GTGGATAAGGGTTAATGACG+AGG | - | Chr7:1319263-1319282 | MsG0780036014.01.T01:intron | 45.0% | |
| GTTCGTATGATTCACGTGCA+TGG | - | Chr7:1318952-1318971 | MsG0780036014.01.T01:intron | 45.0% | |
| TACCCCAAATCCCTCTCTAA+TGG | + | Chr7:1320563-1320582 | None:intergenic | 45.0% | |
| TCATGGAGTTTGCGGGATAA+GGG | + | Chr7:1318766-1318785 | None:intergenic | 45.0% | |
| TCCATGATGCTCCTTTGGTT+AGG | - | Chr7:1318779-1318798 | MsG0780036014.01.T01:intron | 45.0% | |
| TCCTGAAGCTTCCTAACCAA+AGG | + | Chr7:1318793-1318812 | None:intergenic | 45.0% | |
| TCCTTTGGTTAGGAAGCTTC+AGG | - | Chr7:1318789-1318808 | MsG0780036014.01.T01:intron | 45.0% | |
| TCTTTGTGAAAGTGACCGCA+AGG | - | Chr7:1319440-1319459 | MsG0780036014.01.T01:intron | 45.0% | |
| TGACCGCAAGGAACAGATTT+CGG | - | Chr7:1319452-1319471 | MsG0780036014.01.T01:intron | 45.0% | |
| TTGGGTTCAAGGTTGCGAAA+TGG | - | Chr7:1321955-1321974 | MsG0780036014.01.T01:CDS | 45.0% | |
| TTTACACGGCGAGTTGTAGA+GGG | - | Chr7:1321898-1321917 | MsG0780036014.01.T01:CDS | 45.0% | |
| ! | GGAAGCATACCTGATTTACG+AGG | - | Chr7:1319321-1319340 | MsG0780036014.01.T01:CDS | 45.0% |
| !! | AAAACCGTGGCTTGGTATAG+AGG | - | Chr7:1318861-1318880 | MsG0780036014.01.T01:CDS | 45.0% |
| !! | AAACCGTGGCTTGGTATAGA+GGG | - | Chr7:1318862-1318881 | MsG0780036014.01.T01:CDS | 45.0% |
| !! | AAGGAGCATCATGGAGTTTG+CGG | + | Chr7:1318774-1318793 | None:intergenic | 45.0% |
| !! | TCCTAACCAAAGGAGCATCA+TGG | + | Chr7:1318783-1318802 | None:intergenic | 45.0% |
| !! | TTGTTTAAAAAAAAAATATA+TGG | + | Chr7:1320984-1321003 | None:intergenic | 5.0% |
| !!! | AATTTTCTTATATAATTTTT+TGG | - | Chr7:1319977-1319996 | MsG0780036014.01.T01:intron | 5.0% |
| ACAGCGATGGCGACTTAAGA+TGG | + | Chr7:1321254-1321273 | None:intergenic | 50.0% | |
| AGTGGCGAAGATTGGGTTCA+AGG | - | Chr7:1321944-1321963 | MsG0780036014.01.T01:CDS | 50.0% | |
| AGTTTGCGGGATAAGGGGAT+AGG | + | Chr7:1318760-1318779 | None:intergenic | 50.0% | |
| ATAGAGAAGGCTAGGTCGAC+CGG | - | Chr7:1319021-1319040 | MsG0780036014.01.T01:intron | 50.0% | |
| CAAATGGCGTGACCCATTCT+TGG | + | Chr7:1320941-1320960 | None:intergenic | 50.0% | |
| CAAGAATGGGTCACGCCATT+TGG | - | Chr7:1320939-1320958 | MsG0780036014.01.T01:intron | 50.0% | |
| CACGTGCATGGTTCGTCAAT+AGG | - | Chr7:1318964-1318983 | MsG0780036014.01.T01:intron | 50.0% | |
| CATGGAGTTTGCGGGATAAG+GGG | + | Chr7:1318765-1318784 | None:intergenic | 50.0% | |
| CGAAATGGTTCTCCGGTACT+CGG | - | Chr7:1321970-1321989 | MsG0780036014.01.T01:CDS | 50.0% | |
| GCATGGTTCGTCAATAGGGT+TGG | - | Chr7:1318969-1318988 | MsG0780036014.01.T01:intron | 50.0% | |
| GCATGTGTAGGGACCAAGAA+TGG | - | Chr7:1320925-1320944 | MsG0780036014.01.T01:intron | 50.0% | |
| GGAGTTGAGTGGCGAAGATT+GGG | - | Chr7:1321937-1321956 | MsG0780036014.01.T01:CDS | 50.0% | |
| GGCAGTCAAGGCAAAATCGA+CGG | + | Chr7:1319887-1319906 | None:intergenic | 50.0% | |
| GTACCCTCTATACCAAGCCA+CGG | + | Chr7:1318868-1318887 | None:intergenic | 50.0% | |
| GTCTCATCTCTTGCATCGCA+CGG | - | Chr7:1321698-1321717 | MsG0780036014.01.T01:CDS | 50.0% | |
| GTTTGCGGGATAAGGGGATA+GGG | + | Chr7:1318759-1318778 | None:intergenic | 50.0% | |
| TAGATCAGATGGAGGAGGGT+GGG | - | Chr7:1320671-1320690 | MsG0780036014.01.T01:intron | 50.0% | |
| TCGTGGATAAAACCGTGGCT+TGG | - | Chr7:1318853-1318872 | MsG0780036014.01.T01:intron | 50.0% | |
| TCTCATCTCTTGCATCGCAC+GGG | - | Chr7:1321699-1321718 | MsG0780036014.01.T01:CDS | 50.0% | |
| TGGTTCGTCAATAGGGTTGG+CGG | - | Chr7:1318972-1318991 | MsG0780036014.01.T01:intron | 50.0% | |
| TTACACGGCGAGTTGTAGAG+GGG | - | Chr7:1321899-1321918 | MsG0780036014.01.T01:CDS | 50.0% | |
| TTCTTGGTCCCTACACATGC+TGG | + | Chr7:1320925-1320944 | None:intergenic | 50.0% | |
| ! | TTCACAAGCATCGCGGATCA+TGG | + | Chr7:1319289-1319308 | None:intergenic | 50.0% |
| !! | AGGAGCATCATGGAGTTTGC+GGG | + | Chr7:1318773-1318792 | None:intergenic | 50.0% |
| !!! | CGAGGCACTTGTTTTGTTGG+AGG | - | Chr7:1321730-1321749 | MsG0780036014.01.T01:CDS | 50.0% |
| !!! | CTCCGAGGCACTTGTTTTGT+TGG | - | Chr7:1321727-1321746 | MsG0780036014.01.T01:CDS | 50.0% |
| ATCGCACGGGAAATTCTCCG+AGG | - | Chr7:1321712-1321731 | MsG0780036014.01.T01:CDS | 55.0% | |
| CGCTTTCTTGCTGGCAGTCA+AGG | + | Chr7:1319899-1319918 | None:intergenic | 55.0% | |
| CGGAGTTGAGTGGCGAAGAT+TGG | - | Chr7:1321936-1321955 | MsG0780036014.01.T01:CDS | 55.0% | |
| CTCCTATGCACGGAGTTGAG+TGG | - | Chr7:1321926-1321945 | MsG0780036014.01.T01:CDS | 55.0% | |
| GAGGGGTCTTCTCCTATGCA+CGG | - | Chr7:1321916-1321935 | MsG0780036014.01.T01:CDS | 55.0% | |
| GTAGATCAGATGGAGGAGGG+TGG | - | Chr7:1320670-1320689 | MsG0780036014.01.T01:intron | 55.0% | |
| TTAGGGGAGCCTTGGAGCAA+TGG | + | Chr7:1321063-1321082 | None:intergenic | 55.0% | |
| ! | AGGCTTTATGCCCTCCAGTC+AGG | - | Chr7:1320352-1320371 | MsG0780036014.01.T01:intron | 55.0% |
| ! | GGTTCGTCAATAGGGTTGGC+GGG | - | Chr7:1318973-1318992 | MsG0780036014.01.T01:intron | 55.0% |
| ! | GTTCGTCAATAGGGTTGGCG+GGG | - | Chr7:1318974-1318993 | MsG0780036014.01.T01:intron | 55.0% |
| CGCCACTCAACTCCGTGCAT+AGG | + | Chr7:1321931-1321950 | None:intergenic | 60.0% | |
| GAGGAGGGTGGGATCAGAAG+AGG | - | Chr7:1320682-1320701 | MsG0780036014.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 1318655 | 1322183 | 1318655 | ID=MsG0780036014.01;Name=MsG0780036014.01 |
| Chr7 | mRNA | 1318655 | 1322183 | 1318655 | ID=MsG0780036014.01.T01;Parent=MsG0780036014.01;Name=MsG0780036014.01.T01;_AED=0.51;_eAED=0.51;_QI=0|0.25|0.33|1|0.5|0.44|9|0|484 |
| Chr7 | exon | 1318655 | 1318751 | 1318655 | ID=MsG0780036014.01.T01:exon:1719;Parent=MsG0780036014.01.T01 |
| Chr7 | exon | 1318854 | 1318921 | 1318854 | ID=MsG0780036014.01.T01:exon:1718;Parent=MsG0780036014.01.T01 |
| Chr7 | exon | 1319033 | 1319197 | 1319033 | ID=MsG0780036014.01.T01:exon:1717;Parent=MsG0780036014.01.T01 |
| Chr7 | exon | 1319288 | 1319392 | 1319288 | ID=MsG0780036014.01.T01:exon:1716;Parent=MsG0780036014.01.T01 |
| Chr7 | exon | 1319499 | 1319653 | 1319499 | ID=MsG0780036014.01.T01:exon:1715;Parent=MsG0780036014.01.T01 |
| Chr7 | exon | 1321238 | 1321414 | 1321238 | ID=MsG0780036014.01.T01:exon:1714;Parent=MsG0780036014.01.T01 |
| Chr7 | exon | 1321496 | 1322183 | 1321496 | ID=MsG0780036014.01.T01:exon:1713;Parent=MsG0780036014.01.T01 |
| Chr7 | CDS | 1321496 | 1322183 | 1321496 | ID=MsG0780036014.01.T01:cds;Parent=MsG0780036014.01.T01 |
| Chr7 | CDS | 1321238 | 1321414 | 1321238 | ID=MsG0780036014.01.T01:cds;Parent=MsG0780036014.01.T01 |
| Chr7 | CDS | 1319499 | 1319653 | 1319499 | ID=MsG0780036014.01.T01:cds;Parent=MsG0780036014.01.T01 |
| Chr7 | CDS | 1319288 | 1319392 | 1319288 | ID=MsG0780036014.01.T01:cds;Parent=MsG0780036014.01.T01 |
| Chr7 | CDS | 1319033 | 1319197 | 1319033 | ID=MsG0780036014.01.T01:cds;Parent=MsG0780036014.01.T01 |
| Chr7 | CDS | 1318854 | 1318921 | 1318854 | ID=MsG0780036014.01.T01:cds;Parent=MsG0780036014.01.T01 |
| Chr7 | CDS | 1318655 | 1318751 | 1318655 | ID=MsG0780036014.01.T01:cds;Parent=MsG0780036014.01.T01 |
| Gene Sequence |
| Protein sequence |
