AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027566.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027566.01.T01 MTR_5g060880 98.160 326 5 1 1 325 1 326 0.0 649
MsG0580027566.01.T01 MTR_3g073480 71.517 323 82 3 12 326 5 325 3.31e-160 450
MsG0580027566.01.T01 MTR_5g460870 98.404 188 3 0 139 326 1 188 7.15e-131 374
MsG0580027566.01.T01 MTR_8g088750 51.923 312 142 3 18 326 14 320 4.62e-108 318
MsG0580027566.01.T01 MTR_2g006850 52.564 312 125 7 15 320 7 301 8.52e-99 294
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027566.01.T01 AT1G77855 52.147 326 130 9 13 326 6 317 1.14e-103 306
MsG0580027566.01.T01 AT1G22030 53.172 331 135 7 13 326 6 333 1.25e-103 307

Find 81 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTAAAGTCTGGTATTTC+TGG 0.051195 5:-63283270 MsG0580027566.01.T01:CDS
TTTGAACCAAAAGGACTAAT+TGG 0.189146 5:+63283370 None:intergenic
ATCTCCCAGTTGGTGATAAA+TGG 0.219348 5:-63283341 MsG0580027566.01.T01:CDS
GGATGTTGTTGTACGAATTT+AGG 0.224304 5:-63282464 MsG0580027566.01.T01:CDS
AGAAGAAAACCGTGCATTAA+TGG 0.299852 5:-63282766 MsG0580027566.01.T01:CDS
TCACACCCAATTAGTCCTTT+TGG 0.316855 5:-63283376 MsG0580027566.01.T01:CDS
AGAAGGTAGGAAGAAGCTTT+TGG 0.321226 5:-63282253 MsG0580027566.01.T01:CDS
TCTGGTATTTCTGGATTTGA+TGG 0.342159 5:-63283261 MsG0580027566.01.T01:CDS
TACGAGGGTCGTTTGTTTCA+TGG 0.352387 5:-63282558 MsG0580027566.01.T01:CDS
CAGAAATACCAGACTTTAGA+AGG 0.365100 5:+63283271 None:intergenic
TTCTTTGATGAGATTGTAGA+AGG 0.377685 5:-63282270 MsG0580027566.01.T01:CDS
TTGAATTGACATCAAGTTGT+TGG 0.382894 5:+63283434 None:intergenic
TCAAGCCATTTATCACCAAC+TGG 0.389003 5:+63283336 None:intergenic
TGGATGAAAGCTCTAAGCTT+TGG 0.389798 5:-63283305 MsG0580027566.01.T01:CDS
TGAGTTTGTGTTGATGTTGT+TGG 0.391754 5:+63283518 None:intergenic
GCAACTGTGTCTGATGTTAC+AGG 0.398965 5:+63282585 None:intergenic
CACAATCTTGTTACACGGCT+TGG 0.402476 5:-63282619 MsG0580027566.01.T01:CDS
GGTCGTTTGTTTCATGGGTC+AGG 0.403517 5:-63282552 MsG0580027566.01.T01:CDS
TTGAACCAAAAGGACTAATT+GGG 0.411177 5:+63283371 None:intergenic
GAGATGAGCGAGGCAGAGCC+GGG 0.413207 5:-63282486 MsG0580027566.01.T01:CDS
TTTGATGGTTATTACTCGGC+TGG 0.414562 5:-63283246 MsG0580027566.01.T01:CDS
AGAGATGAGCGAGGCAGAGC+CGG 0.423697 5:-63282487 MsG0580027566.01.T01:CDS
GGATGAAAGCTCTAAGCTTT+GGG 0.426496 5:-63283304 MsG0580027566.01.T01:CDS
GTCAATTCAATTCCTTCAAA+GGG 0.434947 5:-63283421 MsG0580027566.01.T01:CDS
GAGAGTGTTAGAATGTGTTT+TGG 0.435765 5:-63282339 MsG0580027566.01.T01:CDS
ACGAGGGTCGTTTGTTTCAT+GGG 0.448540 5:-63282557 MsG0580027566.01.T01:CDS
GTATAGAAAGTACCCTTTGA+AGG 0.448867 5:+63283409 None:intergenic
CACTCCACAACTCTGGCGTC+AGG 0.455987 5:-63283184 MsG0580027566.01.T01:intron
TGTCAATTCAATTCCTTCAA+AGG 0.459089 5:-63283422 MsG0580027566.01.T01:CDS
GCAGGTTGTTCAATGGGAAA+TGG 0.463338 5:-63282385 MsG0580027566.01.T01:CDS
GTTCAATGGGAAATGGAAGA+TGG 0.470402 5:-63282378 MsG0580027566.01.T01:CDS
ACTTGTCACCTTCTAAAGTC+TGG 0.475022 5:-63283279 MsG0580027566.01.T01:CDS
GTCGTCGCAGGTTGTTCAAT+GGG 0.477774 5:-63282391 MsG0580027566.01.T01:CDS
GGAAATGGAAGATGGATTGA+GGG 0.478982 5:-63282370 MsG0580027566.01.T01:CDS
CGTCACCATCCACTGAGATT+CGG 0.490262 5:+63282106 None:intergenic
TGTCGTCGCAGGTTGTTCAA+TGG 0.498908 5:-63282392 MsG0580027566.01.T01:CDS
GCACGCGAGGGCATCGGTCG+AGG 0.499585 5:-63282442 MsG0580027566.01.T01:CDS
AAGGACTAATTGGGTGTGAA+AGG 0.501495 5:+63283380 None:intergenic
ACCGTTTAGCTTTGATTCGA+CGG 0.504065 5:+63282698 None:intergenic
TGGATTTGATGGTTATTACT+CGG 0.505316 5:-63283250 MsG0580027566.01.T01:CDS
ACGGTGTCGAAGAGAAGCTA+TGG 0.506540 5:-63282796 MsG0580027566.01.T01:CDS
CGCGAGGTTGCAGCAGAGAG+TGG 0.510580 5:-63282514 MsG0580027566.01.T01:CDS
GGGAAATGGAAGATGGATTG+AGG 0.510657 5:-63282371 MsG0580027566.01.T01:CDS
ATCAACACAAACTCAGTGAA+TGG 0.511345 5:-63283510 MsG0580027566.01.T01:CDS
CTCATTTCACTCCACAACTC+TGG 0.512605 5:-63283191 MsG0580027566.01.T01:CDS
TTGATGAGATTGTAGAAGGT+AGG 0.520675 5:-63282266 MsG0580027566.01.T01:CDS
CTCTTGTTTCCATTAATGCA+CGG 0.523173 5:+63282757 None:intergenic
CGAAACACAGAGAAAGTAGT+TGG 0.523250 5:+63282733 None:intergenic
TGTTGGAAGAATGAGAAGAA+AGG 0.537093 5:+63283535 None:intergenic
AGCTGAGAGGCGAGTTAGAG+AGG 0.537785 5:-63282419 MsG0580027566.01.T01:CDS
TTGATGGTTATTACTCGGCT+GGG 0.542793 5:-63283245 MsG0580027566.01.T01:CDS
ATTTAGGCACGCGAGGGCAT+CGG 0.544384 5:-63282448 MsG0580027566.01.T01:CDS
AGAGAGGAATGTGTCGTCGC+AGG 0.550993 5:-63282403 MsG0580027566.01.T01:CDS
TCCGTCGAATCAAAGCTAAA+CGG 0.553151 5:-63282699 MsG0580027566.01.T01:CDS
TTAACCTGACGCCAGAGTTG+TGG 0.553856 5:+63283180 None:intergenic
AACGGTTTCAACGGTTTCAG+AGG 0.558496 5:-63282681 MsG0580027566.01.T01:CDS
CGGTGTCGAAGAGAAGCTAT+GGG 0.560559 5:-63282795 MsG0580027566.01.T01:CDS
CTGCTCACAATCTTGTTACA+CGG 0.562715 5:-63282624 MsG0580027566.01.T01:CDS
TCGAAGAGAAGCTATGGGGT+TGG 0.563734 5:-63282790 MsG0580027566.01.T01:CDS
TCAAAGCTAAACGGTTTCAA+CGG 0.574286 5:-63282690 MsG0580027566.01.T01:CDS
TTCTACACATTTCTCAACAG+AGG 0.592064 5:-63283486 MsG0580027566.01.T01:CDS
AGATGAGCGAGGCAGAGCCG+GGG 0.594956 5:-63282485 MsG0580027566.01.T01:CDS
TTTGATTATCAGGTTCTTAG+GGG 0.607677 5:-63282825 MsG0580027566.01.T01:intron
CACTCTCTGCTGCAACCTCG+CGG 0.614502 5:+63282515 None:intergenic
AATTCGTACAACAACATCCC+CGG 0.616810 5:+63282468 None:intergenic
CAGAGTTGTGGAGTGAAATG+AGG 0.619958 5:+63283192 None:intergenic
TAAATGGCTTGATGAATACA+TGG 0.622099 5:-63283325 MsG0580027566.01.T01:CDS
TAACATCAGACACAGTTGCA+AGG 0.624542 5:-63282581 MsG0580027566.01.T01:CDS
GTACGAATTTAGGCACGCGA+GGG 0.624554 5:-63282454 MsG0580027566.01.T01:CDS
CAAGCCATTTATCACCAACT+GGG 0.628864 5:+63283337 None:intergenic
AGTGGCTGCAGAGATGAGCG+AGG 0.631656 5:-63282496 MsG0580027566.01.T01:CDS
AGACACAGTTGCAAGGTACG+AGG 0.637391 5:-63282574 MsG0580027566.01.T01:CDS
TGTACGAATTTAGGCACGCG+AGG 0.650152 5:-63282455 MsG0580027566.01.T01:CDS
CAACAAAGGCCGAATCTCAG+TGG 0.654993 5:-63282115 None:intergenic
GCGACCACAATTTAAAACAT+CGG 0.663825 5:+63282202 None:intergenic
GACACAGTTGCAAGGTACGA+GGG 0.665602 5:-63282573 MsG0580027566.01.T01:CDS
GCATCGGTCGAGGAGCTGAG+AGG 0.696891 5:-63282432 MsG0580027566.01.T01:CDS
AGGTTCTTAGGGGAATATCA+CGG 0.699519 5:-63282815 MsG0580027566.01.T01:CDS
GACTAATGATGTCAGCCGCG+AGG 0.705243 5:-63282530 MsG0580027566.01.T01:CDS
TGTCTGATGTTACAGGACAA+CGG 0.716157 5:+63282592 None:intergenic
GGTGTCGAAGAGAAGCTATG+GGG 0.745445 5:-63282794 MsG0580027566.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTCATTTAAAAAACTA+TGG + Chr5:63283538-63283557 None:intergenic 10.0%
!!! ATTAGATACAATTTTCCTAA+AGG - Chr5:63282745-63282764 MsG0580027566.01.T01:CDS 20.0%
! TAAGAATTCAAATAAGTCCT+CGG - Chr5:63282565-63282584 MsG0580027566.01.T01:CDS 25.0%
! TTATACTAGACTATACTTAC+CGG - Chr5:63282655-63282674 MsG0580027566.01.T01:CDS 25.0%
!! ATCTAATGCTTTGAATAAAC+TGG - Chr5:63282790-63282809 MsG0580027566.01.T01:CDS 25.0%
!! TTTTGGATTTTTGTAGTCAT+AGG - Chr5:63283443-63283462 MsG0580027566.01.T01:CDS 25.0%
!!! ATTACCGATGTTTTAAATTG+TGG - Chr5:63283473-63283492 MsG0580027566.01.T01:CDS 25.0%
!!! TTTTGATTATCAGGTTCTTA+GGG - Chr5:63282853-63282872 MsG0580027566.01.T01:intron 25.0%
AACATTGAATAGTTTCCGAA+AGG + Chr5:63282823-63282842 None:intergenic 30.0%
ACATTGAATAGTTTCCGAAA+GGG + Chr5:63282822-63282841 None:intergenic 30.0%
ACTAAATTCCAAAGTCCTTT+AGG + Chr5:63282763-63282782 None:intergenic 30.0%
GTCAATTCAATTCCTTCAAA+GGG - Chr5:63282258-63282277 MsG0580027566.01.T01:CDS 30.0%
TAAATGGCTTGATGAATACA+TGG - Chr5:63282354-63282373 MsG0580027566.01.T01:CDS 30.0%
TCTAGTTAATAGTTCCTATC+CGG + Chr5:63282677-63282696 None:intergenic 30.0%
TGAAAAATCGAAAGCAACAA+AGG - Chr5:63283550-63283569 MsG0580027566.01.T01:exon 30.0%
TGTCAATTCAATTCCTTCAA+AGG - Chr5:63282257-63282276 MsG0580027566.01.T01:CDS 30.0%
TTCTTTGATGAGATTGTAGA+AGG - Chr5:63283409-63283428 MsG0580027566.01.T01:CDS 30.0%
TTGAACCAAAAGGACTAATT+GGG + Chr5:63282311-63282330 None:intergenic 30.0%
TTTGAACCAAAAGGACTAAT+TGG + Chr5:63282312-63282331 None:intergenic 30.0%
TTTGATTATCAGGTTCTTAG+GGG - Chr5:63282854-63282873 MsG0580027566.01.T01:intron 30.0%
! ACAATTTTCCTAAAGGACTT+TGG - Chr5:63282752-63282771 MsG0580027566.01.T01:CDS 30.0%
! GATGAAGTTTTTGAACCAAA+AGG + Chr5:63282321-63282340 None:intergenic 30.0%
! TGGATTTGATGGTTATTACT+CGG - Chr5:63282429-63282448 MsG0580027566.01.T01:CDS 30.0%
! TTGAATTGACATCAAGTTGT+TGG + Chr5:63282248-63282267 None:intergenic 30.0%
!! CTTTTGATTATCAGGTTCTT+AGG - Chr5:63282852-63282871 MsG0580027566.01.T01:intron 30.0%
!! TGAAGTCTCTTTTGATTATC+AGG - Chr5:63282844-63282863 MsG0580027566.01.T01:intron 30.0%
AGAAGAAAACCGTGCATTAA+TGG - Chr5:63282913-63282932 MsG0580027566.01.T01:intron 35.0%
ATCAACACAAACTCAGTGAA+TGG - Chr5:63282169-63282188 MsG0580027566.01.T01:three_prime_UTR 35.0%
CAGAAATACCAGACTTTAGA+AGG + Chr5:63282411-63282430 None:intergenic 35.0%
GATCGTTGTAATAATCTCGA+TGG + Chr5:63282631-63282650 None:intergenic 35.0%
GGATGTTGTTGTACGAATTT+AGG - Chr5:63283215-63283234 MsG0580027566.01.T01:CDS 35.0%
TCAAAGCTAAACGGTTTCAA+CGG - Chr5:63282989-63283008 MsG0580027566.01.T01:intron 35.0%
TCATCTAAGAGTCTGTTTGA+TGG + Chr5:63282544-63282563 None:intergenic 35.0%
TGTTGGAAGAATGAGAAGAA+AGG + Chr5:63282147-63282166 None:intergenic 35.0%
TTCTACACATTTCTCAACAG+AGG - Chr5:63282193-63282212 MsG0580027566.01.T01:three_prime_UTR 35.0%
TTGATGAGATTGTAGAAGGT+AGG - Chr5:63283413-63283432 MsG0580027566.01.T01:CDS 35.0%
! CTCTTGTTTCCATTAATGCA+CGG + Chr5:63282925-63282944 None:intergenic 35.0%
! GCGACCACAATTTAAAACAT+CGG + Chr5:63283480-63283499 None:intergenic 35.0%
! TGAGTTTGTGTTGATGTTGT+TGG + Chr5:63282164-63282183 None:intergenic 35.0%
!! CTTCTAAAGTCTGGTATTTC+TGG - Chr5:63282409-63282428 MsG0580027566.01.T01:CDS 35.0%
!! GTATAGAAAGTACCCTTTGA+AGG + Chr5:63282273-63282292 None:intergenic 35.0%
!! TAAACTGGTTTGTACCCTTT+CGG - Chr5:63282805-63282824 MsG0580027566.01.T01:CDS 35.0%
!! TAAGTCCTCGGTTTTAATGT+TGG - Chr5:63282577-63282596 MsG0580027566.01.T01:CDS 35.0%
!! TCTGGTATTTCTGGATTTGA+TGG - Chr5:63282418-63282437 MsG0580027566.01.T01:CDS 35.0%
!!! GAGAGTGTTAGAATGTGTTT+TGG - Chr5:63283340-63283359 MsG0580027566.01.T01:CDS 35.0%
!!! TGTTTTGGTGTGCTTAAATC+TGG - Chr5:63283355-63283374 MsG0580027566.01.T01:CDS 35.0%
AAGGACTAATTGGGTGTGAA+AGG + Chr5:63282302-63282321 None:intergenic 40.0%
AATTCGTACAACAACATCCC+CGG + Chr5:63283214-63283233 None:intergenic 40.0%
AGGTTCTTAGGGGAATATCA+CGG - Chr5:63282864-63282883 MsG0580027566.01.T01:intron 40.0%
CAAAAACTTCATCTCCCAGT+TGG - Chr5:63282328-63282347 MsG0580027566.01.T01:CDS 40.0%
CAAGCCATTTATCACCAACT+GGG + Chr5:63282345-63282364 None:intergenic 40.0%
CGAAACACAGAGAAAGTAGT+TGG + Chr5:63282949-63282968 None:intergenic 40.0%
CTAGACCAACATTAAAACCG+AGG + Chr5:63282585-63282604 None:intergenic 40.0%
CTAGACTATACTTACCGGAT+AGG - Chr5:63282660-63282679 MsG0580027566.01.T01:CDS 40.0%
CTGCTCACAATCTTGTTACA+CGG - Chr5:63283055-63283074 MsG0580027566.01.T01:intron 40.0%
GTTCAATGGGAAATGGAAGA+TGG - Chr5:63283301-63283320 MsG0580027566.01.T01:CDS 40.0%
TAACATCAGACACAGTTGCA+AGG - Chr5:63283098-63283117 MsG0580027566.01.T01:intron 40.0%
TCAAGCCATTTATCACCAAC+TGG + Chr5:63282346-63282365 None:intergenic 40.0%
TCCGTCGAATCAAAGCTAAA+CGG - Chr5:63282980-63282999 MsG0580027566.01.T01:intron 40.0%
TCGATGGTTCAAACAACGAT+CGG + Chr5:63282615-63282634 None:intergenic 40.0%
TGTCTGATGTTACAGGACAA+CGG + Chr5:63283090-63283109 None:intergenic 40.0%
! AGAAGGTAGGAAGAAGCTTT+TGG - Chr5:63283426-63283445 MsG0580027566.01.T01:CDS 40.0%
! TAAGAGTCTGTTTGATGGTC+AGG + Chr5:63282539-63282558 None:intergenic 40.0%
! TCACACCCAATTAGTCCTTT+TGG - Chr5:63282303-63282322 MsG0580027566.01.T01:CDS 40.0%
! TTGATGGTTATTACTCGGCT+GGG - Chr5:63282434-63282453 MsG0580027566.01.T01:CDS 40.0%
! TTTGATGGTTATTACTCGGC+TGG - Chr5:63282433-63282452 MsG0580027566.01.T01:CDS 40.0%
!! ACCGTTTAGCTTTGATTCGA+CGG + Chr5:63282984-63283003 None:intergenic 40.0%
!! ACTTGTCACCTTCTAAAGTC+TGG - Chr5:63282400-63282419 MsG0580027566.01.T01:CDS 40.0%
!! ATCTCCCAGTTGGTGATAAA+TGG - Chr5:63282338-63282357 MsG0580027566.01.T01:CDS 40.0%
!! GGAAATGGAAGATGGATTGA+GGG - Chr5:63283309-63283328 MsG0580027566.01.T01:CDS 40.0%
!! GGATGAAAGCTCTAAGCTTT+GGG - Chr5:63282375-63282394 MsG0580027566.01.T01:CDS 40.0%
!! TGGATGAAAGCTCTAAGCTT+TGG - Chr5:63282374-63282393 MsG0580027566.01.T01:CDS 40.0%
AACGGTTTCAACGGTTTCAG+AGG - Chr5:63282998-63283017 MsG0580027566.01.T01:intron 45.0%
ACGAGGGTCGTTTGTTTCAT+GGG - Chr5:63283122-63283141 MsG0580027566.01.T01:intron 45.0%
CACAATCTTGTTACACGGCT+TGG - Chr5:63283060-63283079 MsG0580027566.01.T01:intron 45.0%
CAGAGTTGTGGAGTGAAATG+AGG + Chr5:63282490-63282509 None:intergenic 45.0%
CTCATTTCACTCCACAACTC+TGG - Chr5:63282488-63282507 MsG0580027566.01.T01:CDS 45.0%
GCAACTGTGTCTGATGTTAC+AGG + Chr5:63283097-63283116 None:intergenic 45.0%
GCAGGTTGTTCAATGGGAAA+TGG - Chr5:63283294-63283313 MsG0580027566.01.T01:CDS 45.0%
TACGAGGGTCGTTTGTTTCA+TGG - Chr5:63283121-63283140 MsG0580027566.01.T01:intron 45.0%
!! GGGAAATGGAAGATGGATTG+AGG - Chr5:63283308-63283327 MsG0580027566.01.T01:CDS 45.0%
!!! TAAAAATATCAATTTTTATT+TGG + Chr5:63282718-63282737 None:intergenic 5.0%
AGACACAGTTGCAAGGTACG+AGG - Chr5:63283105-63283124 MsG0580027566.01.T01:intron 50.0%
GACACAGTTGCAAGGTACGA+GGG - Chr5:63283106-63283125 MsG0580027566.01.T01:intron 50.0%
GGTCGTTTGTTTCATGGGTC+AGG - Chr5:63283127-63283146 MsG0580027566.01.T01:intron 50.0%
GTACGAATTTAGGCACGCGA+GGG - Chr5:63283225-63283244 MsG0580027566.01.T01:CDS 50.0%
GTCGTCGCAGGTTGTTCAAT+GGG - Chr5:63283288-63283307 MsG0580027566.01.T01:CDS 50.0%
TCGAAGAGAAGCTATGGGGT+TGG - Chr5:63282889-63282908 MsG0580027566.01.T01:intron 50.0%
TGTACGAATTTAGGCACGCG+AGG - Chr5:63283224-63283243 MsG0580027566.01.T01:CDS 50.0%
TGTCGTCGCAGGTTGTTCAA+TGG - Chr5:63283287-63283306 MsG0580027566.01.T01:CDS 50.0%
TTAACCTGACGCCAGAGTTG+TGG + Chr5:63282502-63282521 None:intergenic 50.0%
! ACGGTGTCGAAGAGAAGCTA+TGG - Chr5:63282883-63282902 MsG0580027566.01.T01:intron 50.0%
! CGGTGTCGAAGAGAAGCTAT+GGG - Chr5:63282884-63282903 MsG0580027566.01.T01:intron 50.0%
! GGTGTCGAAGAGAAGCTATG+GGG - Chr5:63282885-63282904 MsG0580027566.01.T01:intron 50.0%
AGAGAGGAATGTGTCGTCGC+AGG - Chr5:63283276-63283295 MsG0580027566.01.T01:CDS 55.0%
AGCTGAGAGGCGAGTTAGAG+AGG - Chr5:63283260-63283279 MsG0580027566.01.T01:CDS 55.0%
GACTAATGATGTCAGCCGCG+AGG - Chr5:63283149-63283168 MsG0580027566.01.T01:intron 55.0%
! ATTTAGGCACGCGAGGGCAT+CGG - Chr5:63283231-63283250 MsG0580027566.01.T01:CDS 55.0%
AGAGATGAGCGAGGCAGAGC+CGG - Chr5:63283192-63283211 MsG0580027566.01.T01:CDS 60.0%
AGTGGCTGCAGAGATGAGCG+AGG - Chr5:63283183-63283202 MsG0580027566.01.T01:intron 60.0%
CACTCCACAACTCTGGCGTC+AGG - Chr5:63282495-63282514 MsG0580027566.01.T01:CDS 60.0%
CACTCTCTGCTGCAACCTCG+CGG + Chr5:63283167-63283186 None:intergenic 60.0%
AGATGAGCGAGGCAGAGCCG+GGG - Chr5:63283194-63283213 MsG0580027566.01.T01:CDS 65.0%
CGCGAGGTTGCAGCAGAGAG+TGG - Chr5:63283165-63283184 MsG0580027566.01.T01:intron 65.0%
GAGATGAGCGAGGCAGAGCC+GGG - Chr5:63283193-63283212 MsG0580027566.01.T01:CDS 65.0%
! GCATCGGTCGAGGAGCTGAG+AGG - Chr5:63283247-63283266 MsG0580027566.01.T01:CDS 65.0%
!! GCACGCGAGGGCATCGGTCG+AGG - Chr5:63283237-63283256 MsG0580027566.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 63282118 63283583 63282118 ID=MsG0580027566.01;Name=MsG0580027566.01
Chr5 mRNA 63282118 63283583 63282118 ID=MsG0580027566.01.T01;Parent=MsG0580027566.01;Name=MsG0580027566.01.T01;_AED=0.13;_eAED=0.13;_QI=21|1|1|1|1|1|2|115|326
Chr5 exon 63283185 63283583 63283185 ID=MsG0580027566.01.T01:exon:34668;Parent=MsG0580027566.01.T01
Chr5 exon 63282118 63282835 63282118 ID=MsG0580027566.01.T01:exon:34669;Parent=MsG0580027566.01.T01
Chr5 five_prime_UTR 63283563 63283583 63283563 ID=MsG0580027566.01.T01:five_prime_utr;Parent=MsG0580027566.01.T01
Chr5 CDS 63283185 63283562 63283185 ID=MsG0580027566.01.T01:cds;Parent=MsG0580027566.01.T01
Chr5 CDS 63282233 63282835 63282233 ID=MsG0580027566.01.T01:cds;Parent=MsG0580027566.01.T01
Chr5 three_prime_UTR 63282118 63282232 63282118 ID=MsG0580027566.01.T01:three_prime_utr;Parent=MsG0580027566.01.T01
Gene Sequence

>MsG0580027566.01.T01

ATGAACCTTTCTTCTCATTCTTCCAACAACATCAACACAAACTCAGTGAATGGTTTCTACACATTTCTCAACAGAGGAATTGATGACTTAGAAAGAGCTTTTCTTTCCAACAACTTGATGTCAATTCAATTCCTTCAAAGGGTACTTTCTATACTTAGATCCTTTCACACCCAATTAGTCCTTTTGGTTCAAAAACTTCATCTCCCAGTTGGTGATAAATGGCTTGATGAATACATGGATGAAAGCTCTAAGCTTTGGGAAACTTGTCACCTTCTAAAGTCTGGTATTTCTGGATTTGATGGTTATTACTCGGCTGGGATCAACGTCACTAACTTCTTCGACTCTCATCCTCATTTCACTCCACAACTCTGGCGTCAGGTTCTTAGGGGAATATCACGGTGTCGAAGAGAAGCTATGGGGTTGGAAGAAGAAAACCGTGCATTAATGGAAACAAGAGTCCAACTACTTTCTCTGTGTTTCGACGAAAGAGTATCCGTCGAATCAAAGCTAAACGGTTTCAACGGTTTCAGAGGAGTTTTATACGCAATGAGAAACATCAGTTCAATGCTGCTCACAATCTTGTTACACGGCTTGGTTTACCGTTGTCCTGTAACATCAGACACAGTTGCAAGGTACGAGGGTCGTTTGTTTCATGGGTCAGGACTAATGATGTCAGCCGCGAGGTTGCAGCAGAGAGTGGCTGCAGAGATGAGCGAGGCAGAGCCGGGGATGTTGTTGTACGAATTTAGGCACGCGAGGGCATCGGTCGAGGAGCTGAGAGGCGAGTTAGAGAGGAATGTGTCGTCGCAGGTTGTTCAATGGGAAATGGAAGATGGATTGAGGGAGAGAGTAGAGAGTGTTAGAATGTGTTTTGGTGTGCTTAAATCTGGTGCTGATAATATTGTTTCTCAGCTTGATGATTTCTTTGATGAGATTGTAGAAGGTAGGAAGAAGCTTTTGGATTTTTGTAGTCATAGGTAA
Protein sequence

>MsG0580027566.01.T01

MNLSSHSSNNINTNSVNGFYTFLNRGIDDLERAFLSNNLMSIQFLQRVLSILRSFHTQLVLLVQKLHLPVGDKWLDEYMDESSKLWETCHLLKSGISGFDGYYSAGINVTNFFDSHPHFTPQLWRQVLRGISRCRREAMGLEEENRALMETRVQLLSLCFDERVSVESKLNGFNGFRGVLYAMRNISSMLLTILLHGLVYRCPVTSDTVARYEGRLFHGSGLMMSAARLQQRVAAEMSEAEPGMLLYEFRHARASVEELRGELERNVSSQVVQWEMEDGLRERVESVRMCFGVLKSGADNIVSQLDDFFDEIVEGRKKLLDFCSHR*