Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027431.01.T02 | XP_013453968.1 | 97.458 | 118 | 3 | 0 | 1 | 118 | 74 | 191 | 4.35E-79 | 241 |
MsG0580027431.01.T01 | XP_013453968.1 | 92.857 | 168 | 7 | 1 | 15 | 177 | 24 | 191 | 8.78E-109 | 318 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027431.01.T01 | G7JX88 | 92.857 | 168 | 7 | 1 | 15 | 177 | 24 | 191 | 4.19e-109 | 318 |
MsG0580027431.01.T02 | G7JX88 | 97.458 | 118 | 3 | 0 | 1 | 118 | 74 | 191 | 2.08e-79 | 241 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047814.01 | MsG0580027431.01 | 0.833322 | 5.700226e-56 | 6.542204e-53 |
MsG0080047974.01 | MsG0580027431.01 | 0.831272 | 1.834234e-55 | 1.980529e-52 |
MsG0080048291.01 | MsG0580027431.01 | 0.809083 | 2.254352e-50 | 1.311133e-47 |
MsG0080048462.01 | MsG0580027431.01 | 0.815065 | 1.118851e-51 | 7.635375e-49 |
MsG0080048856.01 | MsG0580027431.01 | 0.855235 | 7.228964e-62 | 1.657509e-58 |
MsG0080049140.01 | MsG0580027431.01 | 0.806718 | 7.178370e-50 | 3.924245e-47 |
MsG0180000139.01 | MsG0580027431.01 | 0.864060 | 1.595343e-64 | 4.942548e-61 |
MsG0180000145.01 | MsG0580027431.01 | 0.833030 | 6.739837e-56 | 7.667944e-53 |
MsG0180000178.01 | MsG0580027431.01 | 0.845239 | 4.598617e-59 | 7.614436e-56 |
MsG0180000195.01 | MsG0580027431.01 | 0.812606 | 3.895128e-51 | 2.487556e-48 |
MsG0180000332.01 | MsG0580027431.01 | 0.808902 | 2.465046e-50 | 1.426638e-47 |
MsG0180000334.01 | MsG0580027431.01 | 0.851604 | 7.962671e-61 | 1.620227e-57 |
MsG0180000335.01 | MsG0580027431.01 | 0.822443 | 2.361986e-53 | 1.977353e-50 |
MsG0180000470.01 | MsG0580027431.01 | 0.809527 | 1.810738e-50 | 1.065657e-47 |
MsG0180000557.01 | MsG0580027431.01 | 0.807030 | 6.167639e-50 | 3.399074e-47 |
MsG0180000824.01 | MsG0580027431.01 | 0.828487 | 8.750395e-55 | 8.710107e-52 |
MsG0180000835.01 | MsG0580027431.01 | 0.802946 | 4.407894e-49 | 2.187249e-46 |
MsG0180000983.01 | MsG0580027431.01 | 0.809811 | 1.573512e-50 | 9.330542e-48 |
MsG0180001173.01 | MsG0580027431.01 | 0.820064 | 8.355278e-53 | 6.543496e-50 |
MsG0180001892.01 | MsG0580027431.01 | 0.836755 | 7.770011e-57 | 9.886092e-54 |
MsG0180003094.01 | MsG0580027431.01 | 0.816446 | 5.506234e-52 | 3.902239e-49 |
MsG0180003371.01 | MsG0580027431.01 | 0.815376 | 9.542285e-52 | 6.567680e-49 |
MsG0180003455.01 | MsG0580027431.01 | 0.814184 | 1.752740e-51 | 1.168027e-48 |
MsG0180003651.01 | MsG0580027431.01 | 0.814796 | 1.283933e-51 | 8.698561e-49 |
MsG0180003656.01 | MsG0580027431.01 | 0.819806 | 9.572295e-53 | 7.442640e-50 |
MsG0180003669.01 | MsG0580027431.01 | 0.813680 | 2.263809e-51 | 1.488126e-48 |
MsG0180003786.01 | MsG0580027431.01 | 0.827444 | 1.559298e-54 | 1.505709e-51 |
MsG0180003920.01 | MsG0580027431.01 | 0.866599 | 2.534140e-65 | 8.590053e-62 |
MsG0180003943.01 | MsG0580027431.01 | 0.809230 | 2.096787e-50 | 1.224330e-47 |
MsG0180004049.01 | MsG0580027431.01 | 0.821473 | 3.962600e-53 | 3.226898e-50 |
MsG0180004099.01 | MsG0580027431.01 | 0.881440 | 2.396119e-70 | 1.404035e-66 |
MsG0180004148.01 | MsG0580027431.01 | 0.801627 | 8.236175e-49 | 3.951950e-46 |
MsG0180004152.01 | MsG0580027431.01 | 0.809696 | 1.665715e-50 | 9.847297e-48 |
MsG0180004259.01 | MsG0580027431.01 | 0.822487 | 2.307015e-53 | 1.933734e-50 |
MsG0180004389.01 | MsG0580027431.01 | 0.850996 | 1.182804e-60 | 2.359930e-57 |
MsG0180004463.01 | MsG0580027431.01 | 0.844223 | 8.633017e-59 | 1.384451e-55 |
MsG0180004481.01 | MsG0580027431.01 | 0.812021 | 5.228811e-51 | 3.287188e-48 |
MsG0180004482.01 | MsG0580027431.01 | 0.819850 | 9.352768e-53 | 7.280489e-50 |
MsG0180004509.01 | MsG0580027431.01 | 0.818321 | 2.083669e-52 | 1.554662e-49 |
MsG0180004711.01 | MsG0580027431.01 | 0.824003 | 1.021511e-53 | 8.936172e-51 |
MsG0180004754.01 | MsG0580027431.01 | 0.876618 | 1.210401e-68 | 5.907264e-65 |
MsG0180004928.01 | MsG0580027431.01 | 0.804723 | 1.883683e-49 | 9.784693e-47 |
MsG0180004970.01 | MsG0580027431.01 | 0.824930 | 6.181256e-54 | 5.553528e-51 |
MsG0180004975.01 | MsG0580027431.01 | 0.810427 | 1.158957e-50 | 6.983829e-48 |
MsG0180005250.01 | MsG0580027431.01 | 0.814752 | 1.312732e-51 | 8.883087e-49 |
MsG0180005393.01 | MsG0580027431.01 | 0.800862 | 1.181137e-48 | 5.559288e-46 |
MsG0180005575.01 | MsG0580027431.01 | 0.863007 | 3.384013e-64 | 1.010678e-60 |
MsG0180005659.01 | MsG0580027431.01 | 0.822346 | 2.487818e-53 | 2.076960e-50 |
MsG0180005664.01 | MsG0580027431.01 | 0.818521 | 1.876946e-52 | 1.408236e-49 |
MsG0180005746.01 | MsG0580027431.01 | 0.811973 | 5.355906e-51 | 3.362741e-48 |
MsG0180005921.01 | MsG0580027431.01 | 0.805442 | 1.332312e-49 | 7.049361e-47 |
MsG0180005954.01 | MsG0580027431.01 | 0.827062 | 1.924903e-54 | 1.838015e-51 |
MsG0180005962.01 | MsG0580027431.01 | -0.805298 | 1.427899e-49 | 7.527268e-47 |
MsG0180005993.01 | MsG0580027431.01 | 0.805340 | 1.399553e-49 | 7.385658e-47 |
MsG0180006000.01 | MsG0580027431.01 | 0.840493 | 8.413991e-58 | 1.200594e-54 |
MsG0180006024.01 | MsG0580027431.01 | 0.818012 | 2.447270e-52 | 1.810471e-49 |
MsG0180006224.01 | MsG0580027431.01 | 0.827377 | 1.618074e-54 | 1.559554e-51 |
MsG0280006299.01 | MsG0580027431.01 | 0.832522 | 9.009475e-56 | 1.009502e-52 |
MsG0280006405.01 | MsG0580027431.01 | 0.819382 | 1.196280e-52 | 9.190649e-50 |
MsG0280010698.01 | MsG0580027431.01 | 0.828362 | 9.378282e-55 | 9.300718e-52 |
MsG0280010778.01 | MsG0580027431.01 | 0.829916 | 3.937733e-55 | 4.086866e-52 |
MsG0280010779.01 | MsG0580027431.01 | 0.844344 | 8.012287e-59 | 1.289697e-55 |
MsG0280010788.01 | MsG0580027431.01 | 0.805426 | 1.342547e-49 | 7.100561e-47 |
MsG0280010907.01 | MsG0580027431.01 | 0.830270 | 3.227308e-55 | 3.383776e-52 |
MsG0280010980.01 | MsG0580027431.01 | 0.801380 | 9.253849e-49 | 4.412850e-46 |
MsG0280011014.01 | MsG0580027431.01 | 0.866369 | 2.999417e-65 | 1.008405e-61 |
MsG0280011101.01 | MsG0580027431.01 | 0.824232 | 9.024447e-54 | 7.946680e-51 |
MsG0280011156.01 | MsG0580027431.01 | 0.819803 | 9.588186e-53 | 7.454253e-50 |
MsG0280011258.01 | MsG0580027431.01 | 0.836963 | 6.874478e-57 | 8.801871e-54 |
MsG0280011282.01 | MsG0580027431.01 | 0.854306 | 1.344060e-61 | 2.988777e-58 |
MsG0280011339.01 | MsG0580027431.01 | 0.856637 | 2.811143e-62 | 6.753310e-59 |
MsG0280011341.01 | MsG0580027431.01 | 0.818810 | 1.614256e-52 | 1.220758e-49 |
MsG0280011388.01 | MsG0580027431.01 | 0.875862 | 2.204968e-68 | 1.046231e-64 |
MsG0280011416.01 | MsG0580027431.01 | 0.839103 | 1.935226e-57 | 2.645095e-54 |
MsG0380011609.01 | MsG0580027431.01 | 0.801689 | 7.998590e-49 | 3.843962e-46 |
MsG0380011925.01 | MsG0580027431.01 | 0.801284 | 9.682817e-49 | 4.606273e-46 |
MsG0380012460.01 | MsG0580027431.01 | 0.811471 | 6.884847e-51 | 4.265614e-48 |
MsG0380012471.01 | MsG0580027431.01 | 0.881739 | 1.868383e-70 | 1.107392e-66 |
MsG0380013178.01 | MsG0580027431.01 | 0.823683 | 1.214025e-53 | 1.052706e-50 |
MsG0380013183.01 | MsG0580027431.01 | 0.805474 | 1.312112e-49 | 6.948087e-47 |
MsG0380013475.01 | MsG0580027431.01 | 0.868005 | 8.999683e-66 | 3.205109e-62 |
MsG0380013476.01 | MsG0580027431.01 | 0.819231 | 1.294536e-52 | 9.904464e-50 |
MsG0380013549.01 | MsG0580027431.01 | 0.845576 | 3.726778e-59 | 6.238022e-56 |
MsG0380013834.01 | MsG0580027431.01 | 0.800026 | 1.748106e-48 | 8.054885e-46 |
MsG0380014537.01 | MsG0580027431.01 | 0.838840 | 2.264541e-57 | 3.070440e-54 |
MsG0380014647.01 | MsG0580027431.01 | 0.820728 | 5.883704e-53 | 4.692938e-50 |
MsG0380014701.01 | MsG0580027431.01 | 0.806126 | 9.570391e-50 | 5.153462e-47 |
MsG0380014703.01 | MsG0580027431.01 | 0.807068 | 6.054363e-50 | 3.339865e-47 |
MsG0380014778.01 | MsG0580027431.01 | 0.821190 | 4.606773e-53 | 3.722293e-50 |
MsG0480018507.01 | MsG0580027431.01 | 0.813237 | 2.833745e-51 | 1.840311e-48 |
MsG0480018894.01 | MsG0580027431.01 | 0.885078 | 1.108424e-71 | 7.501088e-68 |
MsG0480018919.01 | MsG0580027431.01 | 0.813899 | 2.025937e-51 | 1.339684e-48 |
MsG0480019276.01 | MsG0580027431.01 | 0.832402 | 9.647688e-56 | 1.077217e-52 |
MsG0480019350.01 | MsG0580027431.01 | 0.851415 | 9.009091e-61 | 1.822258e-57 |
MsG0480019710.01 | MsG0580027431.01 | 0.846326 | 2.330865e-59 | 3.996958e-56 |
MsG0480019922.01 | MsG0580027431.01 | 0.827313 | 1.676333e-54 | 1.612536e-51 |
MsG0480020495.01 | MsG0580027431.01 | 0.822565 | 2.213016e-53 | 1.859150e-50 |
MsG0480020699.01 | MsG0580027431.01 | 0.826494 | 2.630658e-54 | 2.470888e-51 |
MsG0480020739.01 | MsG0580027431.01 | 0.864242 | 1.400009e-64 | 4.365732e-61 |
MsG0480020780.01 | MsG0580027431.01 | 0.838622 | 2.577147e-57 | 3.471469e-54 |
MsG0480020847.01 | MsG0580027431.01 | 0.807647 | 4.564032e-50 | 2.555838e-47 |
MsG0480020874.01 | MsG0580027431.01 | 0.813919 | 2.006088e-51 | 1.327205e-48 |
MsG0480020909.01 | MsG0580027431.01 | 0.832822 | 7.591178e-56 | 8.582115e-53 |
MsG0480021138.01 | MsG0580027431.01 | 0.854193 | 1.449110e-61 | 3.210781e-58 |
MsG0480021452.01 | MsG0580027431.01 | 0.827166 | 1.817345e-54 | 1.740644e-51 |
MsG0480021491.01 | MsG0580027431.01 | 0.826059 | 3.338131e-54 | 3.096981e-51 |
MsG0480022045.01 | MsG0580027431.01 | 0.810909 | 9.116970e-51 | 5.565433e-48 |
MsG0480022052.01 | MsG0580027431.01 | -0.807538 | 4.813900e-50 | 2.688208e-47 |
MsG0480022164.01 | MsG0580027431.01 | 0.838412 | 2.920764e-57 | 3.908969e-54 |
MsG0480022325.01 | MsG0580027431.01 | 0.851126 | 1.087423e-60 | 2.178819e-57 |
MsG0480022549.01 | MsG0580027431.01 | 0.807455 | 5.012820e-50 | 2.793381e-47 |
MsG0480022620.01 | MsG0580027431.01 | 0.850151 | 2.044296e-60 | 3.966914e-57 |
MsG0480022696.01 | MsG0580027431.01 | 0.821841 | 3.257638e-53 | 2.680750e-50 |
MsG0480022788.01 | MsG0580027431.01 | 0.804396 | 2.203947e-49 | 1.135102e-46 |
MsG0480022795.01 | MsG0580027431.01 | 0.838586 | 2.634150e-57 | 3.544326e-54 |
MsG0480022836.01 | MsG0580027431.01 | 0.814601 | 1.417571e-51 | 9.553925e-49 |
MsG0480022855.01 | MsG0580027431.01 | 0.829057 | 6.368053e-55 | 6.444357e-52 |
MsG0480022877.01 | MsG0580027431.01 | 0.803395 | 3.557850e-49 | 1.785948e-46 |
MsG0480022985.01 | MsG0580027431.01 | 0.802677 | 5.007787e-49 | 2.468016e-46 |
MsG0480023221.01 | MsG0580027431.01 | 0.819320 | 1.235656e-52 | 9.476702e-50 |
MsG0480023272.01 | MsG0580027431.01 | 0.802267 | 6.084886e-49 | 2.967722e-46 |
MsG0480023361.01 | MsG0580027431.01 | 0.824962 | 6.072609e-54 | 5.460937e-51 |
MsG0480023463.01 | MsG0580027431.01 | 0.879949 | 8.203166e-70 | 4.536589e-66 |
MsG0480023600.01 | MsG0580027431.01 | 0.821860 | 3.225000e-53 | 2.655325e-50 |
MsG0480023636.01 | MsG0580027431.01 | 0.810945 | 8.955410e-51 | 5.472303e-48 |
MsG0480023657.01 | MsG0580027431.01 | 0.830319 | 3.139718e-55 | 3.296483e-52 |
MsG0480023707.01 | MsG0580027431.01 | 0.838620 | 2.581416e-57 | 3.476957e-54 |
MsG0480023762.01 | MsG0580027431.01 | 0.817091 | 3.947576e-52 | 2.847611e-49 |
MsG0480023832.01 | MsG0580027431.01 | 0.833613 | 4.822897e-56 | 5.583064e-53 |
MsG0580024129.01 | MsG0580027431.01 | 0.847250 | 1.302307e-59 | 2.300928e-56 |
MsG0580024197.01 | MsG0580027431.01 | 0.802648 | 5.076997e-49 | 2.500277e-46 |
MsG0580024358.01 | MsG0580027431.01 | 0.801392 | 9.199713e-49 | 4.388306e-46 |
MsG0580024382.01 | MsG0580027431.01 | 0.820381 | 7.068407e-53 | 5.584419e-50 |
MsG0580024463.01 | MsG0580027431.01 | 0.829279 | 5.627068e-55 | 5.733343e-52 |
MsG0580024489.01 | MsG0580027431.01 | 0.819513 | 1.116327e-52 | 8.608685e-50 |
MsG0580024618.01 | MsG0580027431.01 | 0.804855 | 1.767883e-49 | 9.214515e-47 |
MsG0580024758.01 | MsG0580027431.01 | 0.832544 | 8.895486e-56 | 9.974493e-53 |
MsG0580024981.01 | MsG0580027431.01 | 0.807173 | 5.751090e-50 | 3.181344e-47 |
MsG0580025316.01 | MsG0580027431.01 | 0.814012 | 1.912824e-51 | 1.268776e-48 |
MsG0580025409.01 | MsG0580027431.01 | 0.809329 | 1.996908e-50 | 1.169062e-47 |
MsG0580025587.01 | MsG0580027431.01 | 0.806728 | 7.145703e-50 | 3.907363e-47 |
MsG0580025766.01 | MsG0580027431.01 | 0.818117 | 2.317334e-52 | 1.719311e-49 |
MsG0580026059.01 | MsG0580027431.01 | 0.894805 | 1.744523e-75 | 1.761986e-71 |
MsG0580026075.01 | MsG0580027431.01 | 0.813128 | 2.993437e-51 | 1.938311e-48 |
MsG0580026081.01 | MsG0580027431.01 | 0.846259 | 2.430562e-59 | 4.159075e-56 |
MsG0380015168.01 | MsG0580027431.01 | 0.825102 | 5.627571e-54 | 5.080768e-51 |
MsG0380015196.01 | MsG0580027431.01 | 0.823164 | 1.605355e-53 | 1.371613e-50 |
MsG0380015332.01 | MsG0580027431.01 | 0.851936 | 6.414870e-61 | 1.318939e-57 |
MsG0380015435.01 | MsG0580027431.01 | 0.808384 | 3.179876e-50 | 1.815711e-47 |
MsG0380015548.01 | MsG0580027431.01 | 0.811043 | 8.527157e-51 | 5.223879e-48 |
MsG0380015555.01 | MsG0580027431.01 | 0.863224 | 2.900642e-64 | 8.729282e-61 |
MsG0380015566.01 | MsG0580027431.01 | 0.831094 | 2.028308e-55 | 2.178687e-52 |
MsG0380015631.01 | MsG0580027431.01 | 0.853160 | 2.871359e-61 | 6.145691e-58 |
MsG0380015677.01 | MsG0580027431.01 | 0.865894 | 4.240534e-65 | 1.402142e-61 |
MsG0380015720.01 | MsG0580027431.01 | 0.803910 | 2.781602e-49 | 1.414989e-46 |
MsG0380015831.01 | MsG0580027431.01 | 0.831211 | 1.898257e-55 | 2.046038e-52 |
MsG0380015944.01 | MsG0580027431.01 | 0.828872 | 7.061013e-55 | 7.106669e-52 |
MsG0380016126.01 | MsG0580027431.01 | 0.816028 | 6.830728e-52 | 4.786271e-49 |
MsG0380016131.01 | MsG0580027431.01 | 0.807543 | 4.802161e-50 | 2.682003e-47 |
MsG0380016140.01 | MsG0580027431.01 | 0.809276 | 2.049759e-50 | 1.198306e-47 |
MsG0380016247.01 | MsG0580027431.01 | 0.849826 | 2.520251e-60 | 4.838428e-57 |
MsG0380016407.01 | MsG0580027431.01 | 0.810659 | 1.032639e-50 | 6.261541e-48 |
MsG0380016553.01 | MsG0580027431.01 | 0.807152 | 5.811997e-50 | 3.213160e-47 |
MsG0380016703.01 | MsG0580027431.01 | 0.832130 | 1.126381e-55 | 1.247498e-52 |
MsG0380016765.01 | MsG0580027431.01 | 0.817931 | 2.552513e-52 | 1.884214e-49 |
MsG0380016778.01 | MsG0580027431.01 | 0.801392 | 9.202319e-49 | 4.389496e-46 |
MsG0380016893.01 | MsG0580027431.01 | 0.831255 | 1.851098e-55 | 1.997728e-52 |
MsG0380016919.01 | MsG0580027431.01 | 0.839117 | 1.919044e-57 | 2.624032e-54 |
MsG0380016920.01 | MsG0580027431.01 | 0.853908 | 1.750580e-61 | 3.841982e-58 |
MsG0380016970.01 | MsG0580027431.01 | 0.848134 | 7.436324e-60 | 1.351181e-56 |
MsG0380016994.01 | MsG0580027431.01 | 0.866877 | 2.067906e-65 | 7.078897e-62 |
MsG0380017159.01 | MsG0580027431.01 | 0.860978 | 1.416666e-63 | 3.945006e-60 |
MsG0380017996.01 | MsG0580027431.01 | 0.866228 | 3.324156e-65 | 1.111995e-61 |
MsG0480018163.01 | MsG0580027431.01 | 0.832164 | 1.104778e-55 | 1.224766e-52 |
MsG0480018313.01 | MsG0580027431.01 | 0.837425 | 5.239289e-57 | 6.802857e-54 |
MsG0480018397.01 | MsG0580027431.01 | 0.826351 | 2.845098e-54 | 2.661665e-51 |
MsG0580026089.01 | MsG0580027431.01 | 0.826685 | 2.368624e-54 | 2.237026e-51 |
MsG0580026145.01 | MsG0580027431.01 | 0.849861 | 2.464259e-60 | 4.736579e-57 |
MsG0580026309.01 | MsG0580027431.01 | 0.819598 | 1.067754e-52 | 8.253442e-50 |
MsG0580026593.01 | MsG0580027431.01 | 0.862656 | 4.341667e-64 | 1.281148e-60 |
MsG0580026610.01 | MsG0580027431.01 | 0.816881 | 4.399893e-52 | 3.155793e-49 |
MsG0580027031.01 | MsG0580027431.01 | 0.856391 | 3.321989e-62 | 7.917027e-59 |
MsG0580027091.01 | MsG0580027431.01 | 0.863794 | 1.930548e-64 | 5.926627e-61 |
MsG0580027243.01 | MsG0580027431.01 | 0.835758 | 1.392313e-56 | 1.719030e-53 |
MsG0580027431.01 | MsG0580027566.01 | 0.806217 | 9.155007e-50 | 4.941438e-47 |
MsG0580027431.01 | MsG0580027616.01 | 0.801407 | 9.137503e-49 | 4.360259e-46 |
MsG0580027431.01 | MsG0580027925.01 | 0.809539 | 1.799854e-50 | 1.059606e-47 |
MsG0580027431.01 | MsG0580028060.01 | 0.882558 | 9.422850e-71 | 5.765535e-67 |
MsG0580027431.01 | MsG0580028176.01 | 0.837270 | 5.739161e-57 | 7.415874e-54 |
MsG0580027431.01 | MsG0580028394.01 | 0.807985 | 3.868596e-50 | 2.185694e-47 |
MsG0580027431.01 | MsG0580028436.01 | 0.805302 | 1.425104e-49 | 7.513275e-47 |
MsG0580027431.01 | MsG0580028517.01 | 0.819444 | 1.157916e-52 | 8.912095e-50 |
MsG0580027431.01 | MsG0580028897.01 | 0.819624 | 1.053321e-52 | 8.147410e-50 |
MsG0580027431.01 | MsG0580029127.01 | 0.850474 | 1.658588e-60 | 3.252650e-57 |
MsG0580027431.01 | MsG0580029640.01 | 0.869608 | 2.726395e-66 | 1.029361e-62 |
MsG0580027431.01 | MsG0580029729.01 | 0.875038 | 4.220586e-68 | 1.942766e-64 |
MsG0580027431.01 | MsG0580029825.01 | 0.815489 | 9.005913e-52 | 6.218266e-49 |
MsG0580027431.01 | MsG0680030447.01 | 0.816917 | 4.318036e-52 | 3.100078e-49 |
MsG0580027431.01 | MsG0680030633.01 | 0.813520 | 2.455140e-51 | 1.606933e-48 |
MsG0580027431.01 | MsG0680030865.01 | 0.809597 | 1.748866e-50 | 1.031218e-47 |
MsG0580027431.01 | MsG0680030881.01 | 0.819281 | 1.260982e-52 | 9.660896e-50 |
MsG0580027431.01 | MsG0680030918.01 | 0.805446 | 1.329884e-49 | 7.037155e-47 |
MsG0580027431.01 | MsG0680031488.01 | 0.828145 | 1.057677e-54 | 1.042386e-51 |
MsG0580027431.01 | MsG0680031506.01 | 0.834316 | 3.216580e-56 | 3.803486e-53 |
MsG0580027431.01 | MsG0680031549.01 | 0.884607 | 1.659874e-71 | 1.102303e-67 |
MsG0580027431.01 | MsG0680031617.01 | 0.816414 | 5.598987e-52 | 3.964629e-49 |
MsG0580027431.01 | MsG0680031628.01 | 0.822640 | 2.125866e-53 | 1.789738e-50 |
MsG0580027431.01 | MsG0680032935.01 | 0.830358 | 3.072441e-55 | 3.229713e-52 |
MsG0580027431.01 | MsG0680034234.01 | 0.800039 | 1.737628e-48 | 8.009259e-46 |
MsG0580027431.01 | MsG0680034320.01 | 0.808177 | 3.520634e-50 | 1.999336e-47 |
MsG0580027431.01 | MsG0680034853.01 | 0.801214 | 1.000711e-48 | 4.752163e-46 |
MsG0580027431.01 | MsG0680034890.01 | 0.800342 | 1.507417e-48 | 7.002160e-46 |
MsG0580027431.01 | MsG0680035346.01 | 0.833394 | 5.469269e-56 | 6.290355e-53 |
MsG0580027431.01 | MsG0680035475.01 | 0.840775 | 7.097696e-58 | 1.021656e-54 |
MsG0580027431.01 | MsG0680035526.01 | 0.834212 | 3.414301e-56 | 4.024266e-53 |
MsG0580027431.01 | MsG0680035573.01 | 0.807794 | 4.247230e-50 | 2.387661e-47 |
MsG0580027431.01 | MsG0680035692.01 | 0.818929 | 1.516729e-52 | 1.150981e-49 |
MsG0580027431.01 | MsG0680035876.01 | 0.847944 | 8.391404e-60 | 1.515726e-56 |
MsG0580027431.01 | MsG0680035888.01 | 0.817036 | 4.060698e-52 | 2.924892e-49 |
MsG0580027431.01 | MsG0780035979.01 | 0.846568 | 2.001267e-59 | 3.459066e-56 |
MsG0580027431.01 | MsG0780036136.01 | 0.842794 | 2.079943e-58 | 3.188683e-55 |
MsG0580027431.01 | MsG0780036147.01 | 0.824207 | 9.147783e-54 | 8.049426e-51 |
MsG0580027431.01 | MsG0780036340.01 | 0.823567 | 1.292260e-53 | 1.116719e-50 |
MsG0580027431.01 | MsG0780036477.01 | 0.856252 | 3.648829e-62 | 8.654425e-59 |
MsG0580027431.01 | MsG0780036663.01 | 0.828077 | 1.098337e-54 | 1.080338e-51 |
MsG0580027431.01 | MsG0780036719.01 | 0.823006 | 1.747472e-53 | 1.486440e-50 |
MsG0580027431.01 | MsG0780036752.01 | 0.890087 | 1.351826e-73 | 1.120127e-69 |
MsG0580027431.01 | MsG0780036815.01 | 0.912938 | 1.096761e-83 | 2.530059e-79 |
MsG0580027431.01 | MsG0780036816.01 | 0.817112 | 3.904976e-52 | 2.818451e-49 |
MsG0580027431.01 | MsG0780037054.01 | 0.825209 | 5.310536e-54 | 4.809227e-51 |
MsG0580027431.01 | MsG0780037093.01 | 0.802731 | 4.880853e-49 | 2.408887e-46 |
MsG0580027431.01 | MsG0780037460.01 | 0.803670 | 3.120019e-49 | 1.577211e-46 |
MsG0580027431.01 | MsG0780038386.01 | 0.808043 | 3.759606e-50 | 2.127354e-47 |
MsG0580027431.01 | MsG0780038400.01 | 0.809275 | 2.051034e-50 | 1.199007e-47 |
MsG0580027431.01 | MsG0780038401.01 | 0.822525 | 2.260832e-53 | 1.897110e-50 |
MsG0580027431.01 | MsG0780038424.01 | 0.872580 | 2.851945e-67 | 1.199727e-63 |
MsG0580027431.01 | MsG0780038443.01 | 0.805630 | 1.216403e-49 | 6.467377e-47 |
MsG0580027431.01 | MsG0780038603.01 | 0.847686 | 9.884676e-60 | 1.771057e-56 |
MsG0580027431.01 | MsG0780038652.01 | 0.807397 | 5.156824e-50 | 2.869300e-47 |
MsG0580027431.01 | MsG0780038691.01 | 0.804590 | 2.008065e-49 | 1.039424e-46 |
MsG0580027431.01 | MsG0780038935.01 | 0.805646 | 1.207008e-49 | 6.420050e-47 |
MsG0580027431.01 | MsG0780039059.01 | 0.814958 | 1.181771e-51 | 8.041438e-49 |
MsG0580027431.01 | MsG0780039137.01 | 0.867722 | 1.109524e-65 | 3.912611e-62 |
MsG0580027431.01 | MsG0780039170.01 | 0.812774 | 3.579921e-51 | 2.296272e-48 |
MsG0580027431.01 | MsG0780039243.01 | 0.851852 | 6.772950e-61 | 1.389015e-57 |
MsG0580027431.01 | MsG0780039443.01 | 0.824430 | 8.108590e-54 | 7.180109e-51 |
MsG0580027431.01 | MsG0780039520.01 | 0.844054 | 9.588863e-59 | 1.529686e-55 |
MsG0580027431.01 | MsG0780039527.01 | 0.801740 | 7.806716e-49 | 3.756659e-46 |
MsG0580027431.01 | MsG0780039866.01 | 0.829035 | 6.449123e-55 | 6.522050e-52 |
MsG0580027431.01 | MsG0780040044.01 | 0.826270 | 2.974876e-54 | 2.776618e-51 |
MsG0580027431.01 | MsG0780040057.01 | 0.848605 | 5.509010e-60 | 1.016407e-56 |
MsG0580027431.01 | MsG0780040162.01 | 0.808684 | 2.744190e-50 | 1.579100e-47 |
MsG0580027431.01 | MsG0780040472.01 | 0.807218 | 5.627728e-50 | 3.116716e-47 |
MsG0580027431.01 | MsG0780040482.01 | 0.800838 | 1.194405e-48 | 5.618283e-46 |
MsG0580027431.01 | MsG0780040529.01 | 0.836439 | 9.350121e-57 | 1.178384e-53 |
MsG0580027431.01 | MsG0780040765.01 | 0.834939 | 2.242750e-56 | 2.701801e-53 |
MsG0580027431.01 | MsG0780040841.01 | 0.838201 | 3.310082e-57 | 4.401355e-54 |
MsG0580027431.01 | MsG0780040926.01 | 0.867905 | 9.697236e-66 | 3.441848e-62 |
MsG0580027431.01 | MsG0780041016.01 | 0.813985 | 1.939697e-51 | 1.285565e-48 |
MsG0580027431.01 | MsG0780041063.01 | 0.820921 | 5.311925e-53 | 4.260019e-50 |
MsG0580027431.01 | MsG0780041392.01 | 0.805880 | 1.077933e-49 | 5.768149e-47 |
MsG0580027431.01 | MsG0780041535.01 | 0.813138 | 2.979170e-51 | 1.929567e-48 |
MsG0580027431.01 | MsG0780041559.01 | 0.861996 | 6.928553e-64 | 1.997795e-60 |
MsG0580027431.01 | MsG0780041796.01 | 0.807297 | 5.414015e-50 | 3.004561e-47 |
MsG0580027431.01 | MsG0880041860.01 | 0.822096 | 2.843653e-53 | 2.356886e-50 |
MsG0580027431.01 | MsG0880041896.01 | 0.824218 | 9.090258e-54 | 8.001284e-51 |
MsG0580027431.01 | MsG0880041986.01 | 0.864197 | 1.445381e-64 | 4.499975e-61 |
MsG0580027431.01 | MsG0880042091.01 | 0.864289 | 1.353440e-64 | 4.227515e-61 |
MsG0580027431.01 | MsG0880042128.01 | 0.823003 | 1.750414e-53 | 1.488808e-50 |
MsG0580027431.01 | MsG0880042129.01 | 0.827157 | 1.827004e-54 | 1.749350e-51 |
MsG0580027431.01 | MsG0880042310.01 | 0.807409 | 5.127664e-50 | 2.853930e-47 |
MsG0580027431.01 | MsG0880042311.01 | 0.811837 | 5.731899e-51 | 3.585621e-48 |
MsG0580027431.01 | MsG0880042412.01 | 0.813859 | 2.067338e-51 | 1.365539e-48 |
MsG0580027431.01 | MsG0880042518.01 | 0.817808 | 2.720994e-52 | 2.001845e-49 |
MsG0580027431.01 | MsG0880042544.01 | 0.827927 | 1.193473e-54 | 1.168698e-51 |
MsG0580027431.01 | MsG0880042760.01 | 0.825475 | 4.593766e-54 | 4.191359e-51 |
MsG0580027431.01 | MsG0880042779.01 | 0.880277 | 6.269054e-70 | 3.509681e-66 |
MsG0580027431.01 | MsG0880042813.01 | 0.813192 | 2.898731e-51 | 1.880271e-48 |
MsG0580027431.01 | MsG0880042836.01 | 0.807957 | 3.920754e-50 | 2.213613e-47 |
MsG0580027431.01 | MsG0880042961.01 | 0.830199 | 3.359557e-55 | 3.515409e-52 |
MsG0580027431.01 | MsG0880043479.01 | 0.821330 | 4.275570e-53 | 3.468092e-50 |
MsG0580027431.01 | MsG0880043491.01 | 0.808383 | 3.181844e-50 | 1.816758e-47 |
MsG0580027431.01 | MsG0880043614.01 | 0.867092 | 1.765868e-65 | 6.089353e-62 |
MsG0580027431.01 | MsG0880043992.01 | 0.819878 | 9.215056e-53 | 7.179035e-50 |
MsG0580027431.01 | MsG0880043994.01 | 0.803718 | 3.049794e-49 | 1.543621e-46 |
MsG0580027431.01 | MsG0880044008.01 | 0.824815 | 6.577302e-54 | 5.890026e-51 |
MsG0580027431.01 | MsG0880044510.01 | 0.827378 | 1.616788e-54 | 1.558376e-51 |
MsG0580027431.01 | MsG0880044555.01 | 0.855272 | 7.051214e-62 | 1.618947e-58 |
MsG0580027431.01 | MsG0880044782.01 | 0.882954 | 6.754279e-71 | 4.198781e-67 |
MsG0580027431.01 | MsG0880045145.01 | 0.808779 | 2.618406e-50 | 1.510483e-47 |
MsG0580027431.01 | MsG0880045257.01 | 0.808693 | 2.731647e-50 | 1.572266e-47 |
MsG0580027431.01 | MsG0880045294.01 | 0.841281 | 5.225051e-58 | 7.639424e-55 |
MsG0580027431.01 | MsG0880045393.01 | 0.800823 | 1.202713e-48 | 5.655054e-46 |
MsG0580027431.01 | MsG0880045453.01 | 0.871460 | 6.720982e-67 | 2.713618e-63 |
MsG0580027431.01 | MsG0880045506.01 | 0.818344 | 2.058564e-52 | 1.537033e-49 |
MsG0580027431.01 | MsG0880045653.01 | 0.807670 | 4.512503e-50 | 2.528546e-47 |
MsG0580027431.01 | MsG0880045965.01 | 0.829907 | 3.957263e-55 | 4.106277e-52 |
MsG0580027431.01 | MsG0880046012.01 | 0.874063 | 9.046426e-68 | 4.015493e-64 |
MsG0580027431.01 | MsG0880046059.01 | 0.827686 | 1.364249e-54 | 1.326497e-51 |
MsG0580027431.01 | MsG0880046284.01 | 0.814862 | 1.241335e-51 | 8.424641e-49 |
MsG0580027431.01 | MsG0880046446.01 | 0.836069 | 1.161278e-56 | 1.447310e-53 |
MsG0580027431.01 | MsG0880046933.01 | 0.802310 | 5.962623e-49 | 2.911418e-46 |
MsG0580027431.01 | MsG0880047192.01 | 0.810175 | 1.313685e-50 | 7.863993e-48 |
MsG0580027431.01 | MsG0880047472.01 | 0.808463 | 3.059507e-50 | 1.750541e-47 |
MsG0580027431.01 | MsG0880047473.01 | 0.823954 | 1.048446e-53 | 9.160565e-51 |
MsG0280006712.01 | MsG0580027431.01 | 0.845367 | 4.243709e-59 | 7.055576e-56 |
MsG0280006993.01 | MsG0580027431.01 | 0.804443 | 2.154492e-49 | 1.110990e-46 |
MsG0280007101.01 | MsG0580027431.01 | 0.806787 | 6.941779e-50 | 3.801635e-47 |
MsG0280007196.01 | MsG0580027431.01 | 0.843687 | 1.202275e-58 | 1.895922e-55 |
MsG0280007321.01 | MsG0580027431.01 | 0.826182 | 3.122120e-54 | 2.906742e-51 |
MsG0280007392.01 | MsG0580027431.01 | 0.802997 | 4.300353e-49 | 2.136641e-46 |
MsG0280007452.01 | MsG0580027431.01 | 0.827917 | 1.200233e-54 | 1.174977e-51 |
MsG0280007506.01 | MsG0580027431.01 | 0.806900 | 6.571599e-50 | 3.609395e-47 |
MsG0280007527.01 | MsG0580027431.01 | 0.803675 | 3.112919e-49 | 1.573812e-46 |
MsG0280007609.01 | MsG0580027431.01 | 0.810939 | 8.983576e-51 | 5.488513e-48 |
MsG0280007632.01 | MsG0580027431.01 | 0.802219 | 6.224488e-49 | 3.032037e-46 |
MsG0280007955.01 | MsG0580027431.01 | 0.841169 | 5.591762e-58 | 8.147565e-55 |
MsG0280007960.01 | MsG0580027431.01 | 0.805679 | 1.188076e-49 | 6.324855e-47 |
MsG0280008280.01 | MsG0580027431.01 | 0.819799 | 9.609243e-53 | 7.469890e-50 |
MsG0280008378.01 | MsG0580027431.01 | 0.825158 | 5.459602e-54 | 4.937204e-51 |
MsG0280008457.01 | MsG0580027431.01 | 0.829455 | 5.098284e-55 | 5.220509e-52 |
MsG0280008614.01 | MsG0580027431.01 | 0.826020 | 3.410231e-54 | 3.160466e-51 |
MsG0280008615.01 | MsG0580027431.01 | 0.816237 | 6.132524e-52 | 4.321661e-49 |
MsG0280008909.01 | MsG0580027431.01 | 0.839912 | 1.192910e-57 | 1.671740e-54 |
MsG0280009493.01 | MsG0580027431.01 | 0.811583 | 6.511058e-51 | 4.045759e-48 |
MsG0280009514.01 | MsG0580027431.01 | 0.854621 | 1.089651e-61 | 2.448271e-58 |
MsG0280009748.01 | MsG0580027431.01 | 0.805754 | 1.145663e-49 | 6.111085e-47 |
MsG0280009794.01 | MsG0580027431.01 | 0.906080 | 2.174261e-80 | 3.624537e-76 |
MsG0280009983.01 | MsG0580027431.01 | 0.801358 | 9.351671e-49 | 4.457050e-46 |
MsG0280010002.01 | MsG0580027431.01 | 0.809334 | 1.991946e-50 | 1.166305e-47 |
MsG0280010015.01 | MsG0580027431.01 | 0.877444 | 6.255482e-69 | 3.146358e-65 |
MsG0280010176.01 | MsG0580027431.01 | 0.841532 | 4.488623e-58 | 6.614748e-55 |
MsG0280010489.01 | MsG0580027431.01 | 0.868123 | 8.247533e-66 | 2.950084e-62 |
MsG0280010491.01 | MsG0580027431.01 | 0.867803 | 1.044947e-65 | 3.695372e-62 |
MsG0280010533.01 | MsG0580027431.01 | 0.815491 | 8.995275e-52 | 6.211293e-49 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0580027431.01 | MsG0480022469.01 | PPI |
MsG0580027431.01 | MsG0480022420.01 | PPI |
MsG0580027431.01 | MsG0480022469.01 | PPI |
MsG0580027431.01 | MsG0480022420.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027431.01.T02 | MTR_5g057670 | 97.458 | 118 | 3 | 0 | 1 | 118 | 74 | 191 | 5.26e-83 | 241 |
MsG0580027431.01.T02 | MTR_5g057335 | 97.458 | 118 | 3 | 0 | 1 | 118 | 74 | 191 | 5.26e-83 | 241 |
MsG0580027431.01.T02 | MTR_4g089100 | 52.083 | 96 | 46 | 0 | 1 | 96 | 69 | 164 | 1.83e-33 | 115 |
MsG0580027431.01.T02 | MTR_1g109660 | 40.517 | 116 | 66 | 1 | 2 | 117 | 72 | 184 | 1.05e-26 | 98.2 |
MsG0580027431.01.T02 | MTR_2g079830 | 44.444 | 99 | 55 | 0 | 1 | 99 | 70 | 168 | 1.14e-23 | 90.1 |
MsG0580027431.01.T02 | MTR_1g109700 | 33.913 | 115 | 76 | 0 | 3 | 117 | 71 | 185 | 5.57e-21 | 83.6 |
MsG0580027431.01.T01 | MTR_5g057670 | 92.857 | 168 | 7 | 1 | 15 | 177 | 24 | 191 | 1.06e-112 | 318 |
MsG0580027431.01.T01 | MTR_5g057335 | 92.857 | 168 | 7 | 1 | 15 | 177 | 24 | 191 | 1.06e-112 | 318 |
MsG0580027431.01.T01 | MTR_4g089100 | 44.805 | 154 | 82 | 1 | 7 | 157 | 13 | 166 | 4.10e-44 | 144 |
MsG0580027431.01.T01 | MTR_2g079830 | 45.714 | 140 | 76 | 0 | 19 | 158 | 29 | 168 | 4.01e-37 | 127 |
MsG0580027431.01.T01 | MTR_1g109660 | 41.497 | 147 | 83 | 1 | 30 | 176 | 41 | 184 | 9.21e-37 | 126 |
MsG0580027431.01.T01 | MTR_1g109700 | 36.000 | 150 | 96 | 0 | 27 | 176 | 36 | 185 | 3.11e-30 | 109 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027431.01.T02 | AT1G13380 | 72.414 | 116 | 29 | 1 | 3 | 118 | 76 | 188 | 2.37e-59 | 181 |
MsG0580027431.01.T02 | AT4G27435 | 45.098 | 102 | 56 | 0 | 1 | 102 | 70 | 171 | 4.20e-30 | 106 |
MsG0580027431.01.T02 | AT1G61065 | 44.144 | 111 | 61 | 1 | 1 | 110 | 69 | 179 | 1.26e-28 | 102 |
MsG0580027431.01.T02 | AT1G68220 | 42.609 | 115 | 64 | 2 | 2 | 115 | 72 | 185 | 2.38e-27 | 100 |
MsG0580027431.01.T02 | AT3G15480 | 44.330 | 97 | 53 | 1 | 1 | 96 | 70 | 166 | 4.65e-26 | 96.3 |
MsG0580027431.01.T02 | AT1G52910 | 45.361 | 97 | 52 | 1 | 1 | 96 | 70 | 166 | 4.91e-25 | 93.6 |
MsG0580027431.01.T01 | AT1G13380 | 69.643 | 168 | 43 | 2 | 15 | 177 | 24 | 188 | 6.55e-71 | 213 |
MsG0580027431.01.T01 | AT4G27435 | 45.033 | 151 | 78 | 1 | 16 | 161 | 21 | 171 | 1.17e-43 | 143 |
MsG0580027431.01.T01 | AT1G61065 | 46.099 | 141 | 75 | 1 | 30 | 169 | 39 | 179 | 2.42e-41 | 137 |
MsG0580027431.01.T01 | AT3G15480 | 43.478 | 138 | 77 | 1 | 19 | 155 | 29 | 166 | 1.67e-39 | 132 |
MsG0580027431.01.T01 | AT1G52910 | 44.615 | 130 | 70 | 2 | 28 | 155 | 37 | 166 | 8.07e-35 | 120 |
MsG0580027431.01.T01 | AT1G68220 | 40.411 | 146 | 85 | 2 | 30 | 174 | 41 | 185 | 1.25e-33 | 118 |
MsG0580027431.01.T01 | AT5G17210 | 30.370 | 135 | 91 | 2 | 20 | 153 | 33 | 165 | 3.68e-11 | 59.7 |
Find 23 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTTTCCTATTTCTTCTTTC+AGG | 0.118110 | 5:+60548128 | MsG0580027431.01.T01:CDS |
TTCAGGTGAATCACTGCTTA+TGG | 0.206084 | 5:+60548145 | MsG0580027431.01.T01:CDS |
TCAGATGTTGCAACTGGTTA+TGG | 0.298329 | 5:+60548098 | MsG0580027431.01.T01:CDS |
TTTGGGAGGCCTTTAACCCC+TGG | 0.341537 | 5:+60548188 | MsG0580027431.01.T01:CDS |
TCAGGTGAATCACTGCTTAT+GGG | 0.342216 | 5:+60548146 | MsG0580027431.01.T01:CDS |
ATTCACCTGAAAGAAGAAAT+AGG | 0.343625 | 5:-60548133 | None:intergenic |
AGAAGAAAGAAAATATATAA+TGG | 0.392892 | 5:-60548228 | None:intergenic |
TTGGGAGGCCTTTAACCCCT+GGG | 0.398501 | 5:+60548189 | MsG0580027431.01.T01:CDS |
GTGACAAAGTGCATGTGCTT+TGG | 0.415268 | 5:+60548170 | MsG0580027431.01.T01:CDS |
CAATATGTTTCATTTGTTCC+AGG | 0.417026 | 5:-60548065 | None:intergenic |
TACAGTTCAGATGTTGCAAC+TGG | 0.428312 | 5:+60548092 | MsG0580027431.01.T01:CDS |
TCTCTTCGCTATTGCTTCAC+AGG | 0.429061 | 5:+60548025 | MsG0580027431.01.T01:CDS |
TGACAAAGTGCATGTGCTTT+GGG | 0.430960 | 5:+60548171 | MsG0580027431.01.T01:CDS |
TGTTCCAGGAGTTGTGTGAA+TGG | 0.489039 | 5:-60548051 | None:intergenic |
GGAACCATTCACACAACTCC+TGG | 0.515542 | 5:+60548047 | MsG0580027431.01.T01:CDS |
CTCTTCGCTATTGCTTCACA+GGG | 0.556348 | 5:+60548026 | MsG0580027431.01.T01:CDS |
TGGGAGGCCTTTAACCCCTG+GGG | 0.589713 | 5:+60548190 | MsG0580027431.01.T01:CDS |
GTTGCAACTGGTTATGGAGT+GGG | 0.613168 | 5:+60548104 | MsG0580027431.01.T01:CDS |
GGGAGGCCTTTAACCCCTGG+GGG | 0.642259 | 5:+60548191 | MsG0580027431.01.T01:CDS |
TGTGAAGCAATAGCGAAGAG+AGG | 0.658541 | 5:-60548023 | None:intergenic |
GAAGCAATAGCGAAGAGAGG+AGG | 0.663218 | 5:-60548020 | None:intergenic |
TGTTGCAACTGGTTATGGAG+TGG | 0.682410 | 5:+60548103 | MsG0580027431.01.T01:CDS |
CAAAGTGCATGTGCTTTGGG+AGG | 0.685983 | 5:+60548174 | MsG0580027431.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAGAAAGAAAATATATAA+TGG | - | Chr5:60548231-60548250 | None:intergenic | 15.0% |
!!! | ATTATTGGAAATTTCATTTT+TGG | + | Chr5:60548378-60548397 | MsG0580027431.01.T01:intron | 15.0% |
!!! | CTTCATATTTTACATTAATT+TGG | + | Chr5:60547997-60548016 | MsG0580027431.01.T01:CDS | 15.0% |
!!! | TTATATATTTTCTTTCTTCT+TGG | + | Chr5:60548231-60548250 | MsG0580027431.01.T01:CDS | 15.0% |
!! | ACTAACAAAGAACATATTTA+TGG | + | Chr5:60548591-60548610 | MsG0580027431.01.T01:intron | 20.0% |
!!! | TCATCTTTTCTTGATTTATT+TGG | + | Chr5:60548403-60548422 | MsG0580027431.01.T01:intron | 20.0% |
!!! | TTTCCAATAATTTTTTTCAC+TGG | - | Chr5:60548369-60548388 | None:intergenic | 20.0% |
! | AAAACAAAAAACACATACAG+TGG | - | Chr5:60548779-60548798 | None:intergenic | 25.0% |
! | ATGAAACAATGATTCCTATT+TGG | - | Chr5:60548755-60548774 | None:intergenic | 25.0% |
! | CAAATTTATTGTGATCTATG+AGG | + | Chr5:60548848-60548867 | MsG0580027431.01.T01:intron | 25.0% |
! | TCTTGATTTATTTGGTTGAT+TGG | + | Chr5:60548411-60548430 | MsG0580027431.01.T01:intron | 25.0% |
! | TGTCCAGTGAAAAAAATTAT+TGG | + | Chr5:60548363-60548382 | MsG0580027431.01.T01:intron | 25.0% |
! | TTTGGTTAGAATAACCAAAT+AGG | + | Chr5:60548738-60548757 | MsG0580027431.01.T01:intron | 25.0% |
!!! | TTTTTGTTTTGCTACATTGA+AGG | - | Chr5:60548465-60548484 | None:intergenic | 25.0% |
!!! | TTTTTTTTTCCTTTTTCCCA+GGG | + | Chr5:60548918-60548937 | MsG0580027431.01.T01:intron | 25.0% |
!!! | TTTTTTTTTTCCTTTTTCCC+AGG | + | Chr5:60548917-60548936 | MsG0580027431.01.T01:intron | 25.0% |
AAATGAGTAAGACACACTTT+GGG | - | Chr5:60548493-60548512 | None:intergenic | 30.0% | |
ATAAATAATTCCCCGGTATT+TGG | - | Chr5:60549004-60549023 | None:intergenic | 30.0% | |
ATGTTCTTTGTTAGTCAACT+TGG | - | Chr5:60548586-60548605 | None:intergenic | 30.0% | |
ATTCACCTGAAAGAAGAAAT+AGG | - | Chr5:60548136-60548155 | None:intergenic | 30.0% | |
ATTTATCCGTTAATTGTGTG+AGG | - | Chr5:60548662-60548681 | None:intergenic | 30.0% | |
CAATATGTTTCATTTGTTCC+AGG | - | Chr5:60548068-60548087 | None:intergenic | 30.0% | |
! | AATTTTCATCGTTGTAACGA+TGG | + | Chr5:60549077-60549096 | MsG0580027431.01.T01:CDS | 30.0% |
! | TCTTCACTAGTGAATCATTT+TGG | + | Chr5:60548881-60548900 | MsG0580027431.01.T01:intron | 30.0% |
!!! | ACTCATTTTGGCTATAGATT+TGG | + | Chr5:60548720-60548739 | MsG0580027431.01.T01:intron | 30.0% |
AAGTGTGTCTTACTCATTTC+AGG | + | Chr5:60548494-60548513 | MsG0580027431.01.T01:intron | 35.0% | |
ACAATGCCTCACACAATTAA+CGG | + | Chr5:60548653-60548672 | MsG0580027431.01.T01:intron | 35.0% | |
AGTGTGTCTTACTCATTTCA+GGG | + | Chr5:60548495-60548514 | MsG0580027431.01.T01:intron | 35.0% | |
CTATAGCCAAAATGAGTGAA+GGG | - | Chr5:60548717-60548736 | None:intergenic | 35.0% | |
GAAATGAGTAAGACACACTT+TGG | - | Chr5:60548494-60548513 | None:intergenic | 35.0% | |
TACAACGATGAAAATTGCTC+CGG | - | Chr5:60549073-60549092 | None:intergenic | 35.0% | |
TACTCATTTCAGGGTTCAAA+CGG | + | Chr5:60548504-60548523 | MsG0580027431.01.T01:intron | 35.0% | |
TCTATAGCCAAAATGAGTGA+AGG | - | Chr5:60548718-60548737 | None:intergenic | 35.0% | |
TCTGAGCATAAATAATTCCC+CGG | - | Chr5:60549011-60549030 | None:intergenic | 35.0% | |
TTTATTCACACGAAGCTTCT+TGG | + | Chr5:60548797-60548816 | MsG0580027431.01.T01:intron | 35.0% | |
! | GCTTTCCTATTTCTTCTTTC+AGG | + | Chr5:60548128-60548147 | MsG0580027431.01.T01:CDS | 35.0% |
!! | GGTTGATTGGTTTAAGTATG+TGG | + | Chr5:60548424-60548443 | MsG0580027431.01.T01:intron | 35.0% |
ACTTCTCCTGTGAAAGTTTG+AGG | + | Chr5:60549031-60549050 | MsG0580027431.01.T01:CDS | 40.0% | |
ACTTTCTCAGAAGACCAATC+GGG | + | Chr5:60549149-60549168 | MsG0580027431.01.T01:CDS | 40.0% | |
AGAGCCAAACTAACGAACAA+AGG | + | Chr5:60548547-60548566 | MsG0580027431.01.T01:intron | 40.0% | |
ATGCCTATCACACCAAATAC+CGG | + | Chr5:60548989-60549008 | MsG0580027431.01.T01:CDS | 40.0% | |
CACTTTCTCAGAAGACCAAT+CGG | + | Chr5:60549148-60549167 | MsG0580027431.01.T01:CDS | 40.0% | |
CTACTACCTGTACTTCACAA+AGG | + | Chr5:60549113-60549132 | MsG0580027431.01.T01:CDS | 40.0% | |
GCAGAATCATGCTTAATAGC+TGG | + | Chr5:60548955-60548974 | MsG0580027431.01.T01:CDS | 40.0% | |
GTGTCCTTTGTTCGTTAGTT+TGG | - | Chr5:60548554-60548573 | None:intergenic | 40.0% | |
TACAGTTCAGATGTTGCAAC+TGG | + | Chr5:60548092-60548111 | MsG0580027431.01.T01:CDS | 40.0% | |
TCAGATGTTGCAACTGGTTA+TGG | + | Chr5:60548098-60548117 | MsG0580027431.01.T01:CDS | 40.0% | |
TCAGGTGAATCACTGCTTAT+GGG | + | Chr5:60548146-60548165 | MsG0580027431.01.T01:CDS | 40.0% | |
TCCTGTGAAAGTTTGAGGAA+AGG | + | Chr5:60549036-60549055 | MsG0580027431.01.T01:CDS | 40.0% | |
TGACAAAGTGCATGTGCTTT+GGG | + | Chr5:60548171-60548190 | MsG0580027431.01.T01:CDS | 40.0% | |
TGATTCTGCAACCAGAAAAG+TGG | - | Chr5:60548944-60548963 | None:intergenic | 40.0% | |
TTCAGGTGAATCACTGCTTA+TGG | + | Chr5:60548145-60548164 | MsG0580027431.01.T01:CDS | 40.0% | |
TTCATCTGAACACGCTGATA+CGG | + | Chr5:60548289-60548308 | MsG0580027431.01.T01:intron | 40.0% | |
! | ACACAACCCTTCACTCATTT+TGG | + | Chr5:60548708-60548727 | MsG0580027431.01.T01:intron | 40.0% |
!! | AGGAAAGGCATCTTCATTAC+CGG | + | Chr5:60549051-60549070 | MsG0580027431.01.T01:CDS | 40.0% |
AATCGTGGAACTAACCCGAT+TGG | - | Chr5:60549166-60549185 | None:intergenic | 45.0% | |
AGTTCCACGATTGGAATGAC+CGG | + | Chr5:60549174-60549193 | MsG0580027431.01.T01:CDS | 45.0% | |
CTCTTCGCTATTGCTTCACA+GGG | + | Chr5:60548026-60548045 | MsG0580027431.01.T01:CDS | 45.0% | |
GCCTTTCCTCAAACTTTCAC+AGG | - | Chr5:60549040-60549059 | None:intergenic | 45.0% | |
GTGACAAAGTGCATGTGCTT+TGG | + | Chr5:60548170-60548189 | MsG0580027431.01.T01:CDS | 45.0% | |
GTTGCAACTGGTTATGGAGT+GGG | + | Chr5:60548104-60548123 | MsG0580027431.01.T01:CDS | 45.0% | |
TCTCTTCGCTATTGCTTCAC+AGG | + | Chr5:60548025-60548044 | MsG0580027431.01.T01:CDS | 45.0% | |
TGCCTATCACACCAAATACC+GGG | + | Chr5:60548990-60549009 | MsG0580027431.01.T01:CDS | 45.0% | |
TGGTTGCCTTTGTGAAGTAC+AGG | - | Chr5:60549122-60549141 | None:intergenic | 45.0% | |
TGTGAAGCAATAGCGAAGAG+AGG | - | Chr5:60548026-60548045 | None:intergenic | 45.0% | |
TGTTCCAGGAGTTGTGTGAA+TGG | - | Chr5:60548054-60548073 | None:intergenic | 45.0% | |
TGTTGCAACTGGTTATGGAG+TGG | + | Chr5:60548103-60548122 | MsG0580027431.01.T01:CDS | 45.0% | |
! | CTTCTGAGAAAGTGGAGTAG+TGG | - | Chr5:60549142-60549161 | None:intergenic | 45.0% |
!! | AATCGGGTTAGTTCCACGAT+TGG | + | Chr5:60549165-60549184 | MsG0580027431.01.T01:CDS | 45.0% |
!! | CGATTGGTCTTCTGAGAAAG+TGG | - | Chr5:60549150-60549169 | None:intergenic | 45.0% |
!! | CGTTAGTTTGGCTCTCGAAT+GGG | - | Chr5:60548542-60548561 | None:intergenic | 45.0% |
!! | TCGTTAGTTTGGCTCTCGAA+TGG | - | Chr5:60548543-60548562 | None:intergenic | 45.0% |
ATGTCCGGTCATTCCAATCG+TGG | - | Chr5:60549181-60549200 | None:intergenic | 50.0% | |
GAAAAGTGGCCCTGGGAAAA+AGG | - | Chr5:60548930-60548949 | None:intergenic | 50.0% | |
GAAGCAATAGCGAAGAGAGG+AGG | - | Chr5:60548023-60548042 | None:intergenic | 50.0% | |
GCCTATCACACCAAATACCG+GGG | + | Chr5:60548991-60549010 | MsG0580027431.01.T01:CDS | 50.0% | |
GGAACCATTCACACAACTCC+TGG | + | Chr5:60548047-60548066 | MsG0580027431.01.T01:CDS | 50.0% | |
! | CAAAGTGCATGTGCTTTGGG+AGG | + | Chr5:60548174-60548193 | MsG0580027431.01.T01:CDS | 50.0% |
!! | TCCCCGGTATTTGGTGTGAT+AGG | - | Chr5:60548995-60549014 | None:intergenic | 50.0% |
!!! | TTTTCCCAGGGCCACTTTTC+TGG | + | Chr5:60548930-60548949 | MsG0580027431.01.T01:intron | 50.0% |
ACCAAGCTCGATTTCCCCCA+GGG | - | Chr5:60548208-60548227 | None:intergenic | 55.0% | |
CGATTTCCCCCAGGGGTTAA+AGG | - | Chr5:60548200-60548219 | None:intergenic | 55.0% | |
GCAACCAGAAAAGTGGCCCT+GGG | - | Chr5:60548937-60548956 | None:intergenic | 55.0% | |
TGCAACCAGAAAAGTGGCCC+TGG | - | Chr5:60548938-60548957 | None:intergenic | 55.0% | |
TTGGGAGGCCTTTAACCCCT+GGG | + | Chr5:60548189-60548208 | MsG0580027431.01.T01:CDS | 55.0% | |
TTTGGGAGGCCTTTAACCCC+TGG | + | Chr5:60548188-60548207 | MsG0580027431.01.T01:CDS | 55.0% | |
CCAAGCTCGATTTCCCCCAG+GGG | - | Chr5:60548207-60548226 | None:intergenic | 60.0% | |
GACCAAGCTCGATTTCCCCC+AGG | - | Chr5:60548209-60548228 | None:intergenic | 60.0% | |
TGGGAGGCCTTTAACCCCTG+GGG | + | Chr5:60548190-60548209 | MsG0580027431.01.T01:CDS | 60.0% | |
CCCCTGGGGGAAATCGAGCT+TGG | + | Chr5:60548204-60548223 | MsG0580027431.01.T01:CDS | 65.0% | |
GGGAGGCCTTTAACCCCTGG+GGG | + | Chr5:60548191-60548210 | MsG0580027431.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 60547987 | 60549206 | 60547987 | ID=MsG0580027431.01;Name=MsG0580027431.01 |
Chr5 | mRNA | 60547987 | 60549206 | 60547987 | ID=MsG0580027431.01.T01;Parent=MsG0580027431.01;Name=MsG0580027431.01.T01;_AED=0.50;_eAED=0.54;_QI=0|0|0|1|0|0|2|0|177 |
Chr5 | exon | 60547987 | 60548252 | 60547987 | ID=MsG0580027431.01.T01:exon:22341;Parent=MsG0580027431.01.T01 |
Chr5 | CDS | 60547987 | 60548252 | 60547987 | ID=MsG0580027431.01.T01:cds;Parent=MsG0580027431.01.T01 |
Chr5 | CDS | 60548939 | 60549206 | 60548939 | ID=MsG0580027431.01.T01:cds;Parent=MsG0580027431.01.T01 |
Chr5 | mRNA | 60548164 | 60549206 | 60548164 | ID=MsG0580027431.01.T02;Parent=MsG0580027431.01;Name=MsG0580027431.01.T02;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|0|0|2|0|118 |
Chr5 | exon | 60548164 | 60548252 | 60548164 | ID=MsG0580027431.01.T02:exon:22343;Parent=MsG0580027431.01.T02 |
Chr5 | CDS | 60548164 | 60548252 | 60548164 | ID=MsG0580027431.01.T02:cds;Parent=MsG0580027431.01.T02 |
Chr5 | CDS | 60548939 | 60549206 | 60548939 | ID=MsG0580027431.01.T02:cds;Parent=MsG0580027431.01.T02 |
Gene Sequence |
Protein sequence |