AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027618.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027618.01.T01 MTR_5g062430 96.593 587 17 1 9 592 1 587 0.0 1175
MsG0580027618.01.T01 MTR_5g062320 90.598 585 54 1 9 592 1 585 0.0 1111
MsG0580027618.01.T01 MTR_5g062370 89.267 587 60 1 9 592 1 587 0.0 1092
MsG0580027618.01.T01 MTR_5g062370 89.267 587 60 1 9 592 1 587 0.0 1089
MsG0580027618.01.T01 MTR_5g062650 83.390 590 92 3 9 592 1 590 0.0 1023
MsG0580027618.01.T01 MTR_3g074060 71.280 578 159 3 16 592 10 581 0.0 870
MsG0580027618.01.T01 MTR_1g106860 54.367 561 248 7 35 592 18 573 0.0 612
MsG0580027618.01.T01 MTR_1g087240 50.000 582 271 6 13 592 3 566 0.0 599
MsG0580027618.01.T01 MTR_5g030860 50.084 593 263 10 13 591 8 581 0.0 597
MsG0580027618.01.T01 MTR_7g109390 50.903 554 260 5 41 592 28 571 0.0 596
MsG0580027618.01.T01 MTR_2g034720 50.256 585 272 8 9 591 1 568 0.0 587
MsG0580027618.01.T01 MTR_4g094285 48.810 588 281 9 11 591 10 584 0.0 580
MsG0580027618.01.T01 MTR_2g008240 51.434 558 252 8 41 591 40 585 0.0 579
MsG0580027618.01.T01 MTR_6g028090 27.524 614 333 25 43 589 16 584 3.59e-38 149
MsG0580027618.01.T01 MTR_6g028120 27.953 601 327 28 53 589 7 565 2.86e-37 147
MsG0580027618.01.T01 MTR_3g462820 26.476 593 344 22 55 590 22 579 1.09e-36 145
MsG0580027618.01.T01 MTR_2g030000 27.243 602 312 26 62 589 37 586 1.23e-36 145
MsG0580027618.01.T01 MTR_3g079750 26.568 606 345 25 45 589 18 584 5.42e-36 143
MsG0580027618.01.T01 MTR_6g028100 27.713 599 313 28 62 589 35 584 9.96e-35 139
MsG0580027618.01.T01 MTR_7g086030 27.451 612 312 27 55 589 4 560 6.43e-34 137
MsG0580027618.01.T01 MTR_7g086030 27.451 612 312 27 55 589 29 585 1.29e-33 136
MsG0580027618.01.T01 MTR_6g028110 26.290 620 337 27 41 589 15 585 2.43e-33 135
MsG0580027618.01.T01 MTR_6g028110 25.968 620 339 27 41 589 15 585 3.96e-33 135
MsG0580027618.01.T01 MTR_5g069800 24.916 594 349 22 57 590 7 563 1.96e-31 129
MsG0580027618.01.T01 MTR_5g069740 24.486 584 342 21 62 590 12 551 2.58e-26 114
MsG0580027618.01.T01 MTR_7g086010 25.942 451 249 18 52 441 26 452 2.18e-23 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027618.01.T01 AT1G78060 67.266 556 178 3 39 592 22 575 0.0 784
MsG0580027618.01.T01 AT5G10560 53.065 571 246 6 39 592 28 593 0.0 626
MsG0580027618.01.T01 AT3G19620 54.054 555 244 9 41 591 27 574 0.0 619
MsG0580027618.01.T01 AT5G09730 52.316 583 262 9 12 591 9 578 0.0 608
MsG0580027618.01.T01 AT5G64570 52.265 574 264 8 20 591 23 588 0.0 603
MsG0580027618.01.T01 AT5G64570 52.265 574 264 8 20 591 23 588 0.0 603
MsG0580027618.01.T01 AT1G02640 50.000 588 274 7 7 592 4 573 0.0 597
MsG0580027618.01.T01 AT5G49360 50.000 582 270 10 14 592 14 577 0.0 581
MsG0580027618.01.T01 AT5G64570 53.653 438 194 7 155 591 1 430 2.45e-161 475
MsG0580027618.01.T01 AT5G09700 49.481 289 142 3 305 591 45 331 1.78e-88 284
MsG0580027618.01.T01 AT3G47040 27.041 588 348 23 55 590 10 568 1.05e-38 151
MsG0580027618.01.T01 AT3G47010 26.555 595 342 26 55 590 11 569 1.78e-37 147
MsG0580027618.01.T01 AT3G47000 26.825 589 348 23 55 590 10 568 2.43e-36 144
MsG0580027618.01.T01 AT3G47040 26.281 605 356 24 55 590 10 593 4.80e-36 143
MsG0580027618.01.T01 AT3G47010 26.387 595 342 27 55 590 11 568 7.97e-36 142
MsG0580027618.01.T01 AT3G47040 29.817 436 237 17 55 441 10 425 3.06e-35 138
MsG0580027618.01.T01 AT3G47050 26.377 599 344 23 51 590 6 566 2.45e-34 138
MsG0580027618.01.T01 AT3G47000 29.245 424 230 16 55 429 10 412 7.42e-33 131
MsG0580027618.01.T01 AT5G20950 28.019 414 227 16 65 429 114 505 7.71e-33 134
MsG0580027618.01.T01 AT5G20950 28.019 414 227 16 65 429 36 427 8.54e-33 134
MsG0580027618.01.T01 AT5G20950 28.019 414 227 16 65 429 36 427 8.54e-33 134
MsG0580027618.01.T01 AT3G47010 27.902 448 249 19 55 453 11 433 1.41e-31 128
MsG0580027618.01.T01 AT5G04885 24.662 592 341 23 61 589 36 585 7.51e-31 128
MsG0580027618.01.T01 AT5G04885 24.662 592 341 23 61 589 36 585 7.51e-31 128
MsG0580027618.01.T01 AT5G04885 24.662 592 341 23 61 589 53 602 9.28e-31 128
MsG0580027618.01.T01 AT5G20940 27.660 423 242 17 65 441 42 446 2.33e-29 123
MsG0580027618.01.T01 AT3G62710 28.718 390 224 17 67 441 105 455 1.87e-27 117
MsG0580027618.01.T01 AT3G47040 25.162 616 357 26 55 590 10 601 9.40e-27 115
MsG0580027618.01.T01 AT3G47050 27.128 376 214 12 51 382 6 365 1.20e-24 106
MsG0580027618.01.T01 AT3G47010 26.747 415 250 20 201 590 5 390 2.78e-23 103

Find 154 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAAATTGGAGGGATTATT+TGG 0.068417 5:-64447908 MsG0580027618.01.T01:CDS
AACAACTTTAGATGATTTAT+TGG 0.151178 5:+64448274 None:intergenic
AATAAGTGATTATGTTATTT+TGG 0.156153 5:-64448102 MsG0580027618.01.T01:CDS
CACCAAACATAAACATATTT+AGG 0.158019 5:-64451650 MsG0580027618.01.T01:CDS
TTCTAAGAAGCCGGTTATTT+TGG 0.173735 5:-64447979 MsG0580027618.01.T01:CDS
GCTAAGAATAATGACAAAAT+TGG 0.212120 5:-64447921 MsG0580027618.01.T01:CDS
AAGCCCAAGGGATGACGTTT+TGG 0.232154 5:-64451674 MsG0580027618.01.T01:CDS
TTTGAAGGTGGGAAACTAAT+TGG 0.240728 5:-64451528 MsG0580027618.01.T01:CDS
TCTTGTCCTCTTCCCCATCT+TGG 0.274411 5:+64451624 None:intergenic
ACTGATTTGGTACCAAAGTT+TGG 0.274907 5:+64452050 None:intergenic
GTAAATACCCTTGGAGTTAT+AGG 0.279725 5:-64448305 MsG0580027618.01.T01:CDS
TCAGGTCACTTTGCAAGATT+TGG 0.297826 5:-64450505 MsG0580027618.01.T01:intron
TAGATGATTTATTGGCATTA+GGG 0.300640 5:+64448282 None:intergenic
CTTGTCCTCTTCCCCATCTT+GGG 0.306397 5:+64451625 None:intergenic
TTAGATGATTTATTGGCATT+AGG 0.307293 5:+64448281 None:intergenic
GCACGGTCAATTTGAGATAT+TGG 0.320652 5:+64448515 None:intergenic
AGATTAGTACCAATATTAAA+AGG 0.321384 5:-64448224 MsG0580027618.01.T01:CDS
AACCGGCTTCTTAGAAGCTT+TGG 0.321699 5:+64447986 None:intergenic
TCTTTAGAGCAGACTTGGTT+TGG 0.327651 5:+64448410 None:intergenic
AGTTACTAACCTTACTGATT+TGG 0.329121 5:+64452037 None:intergenic
CTGCCTATGATTTGGATCAT+TGG 0.352319 5:-64451467 MsG0580027618.01.T01:CDS
CTGATTTGGTACCAAAGTTT+GGG 0.352627 5:+64452051 None:intergenic
TATCGTTCTGGATGTCTTGA+TGG 0.362209 5:-64448173 MsG0580027618.01.T01:CDS
TTAAAATGTATGTAGGTGAT+TGG 0.364123 5:-64451729 MsG0580027618.01.T01:intron
CACAAAATTACCAAAATAAC+CGG 0.364275 5:+64447969 None:intergenic
TTTGGATCATTGGAAGGGTT+TGG 0.364911 5:-64451457 MsG0580027618.01.T01:CDS
TGGTGGAAGGGCTCTTGCTC+AGG 0.371596 5:-64447865 MsG0580027618.01.T01:CDS
TCCCTAAATATGTTTATGTT+TGG 0.371836 5:+64451648 None:intergenic
AGCCAAACACATTATCGTTC+TGG 0.371977 5:-64448185 MsG0580027618.01.T01:CDS
GCTCTTGCTCAGGTTGTGTT+TGG 0.377174 5:-64447855 MsG0580027618.01.T01:CDS
TTGGACCAATTGTGCCATAT+TGG 0.378543 5:+64448429 None:intergenic
CAAAATTGGAGGGATTATTT+GGG 0.380232 5:-64447907 MsG0580027618.01.T01:CDS
AGATTGAATGGCAGTGTTGC+AGG 0.383130 5:-64452120 MsG0580027618.01.T01:CDS
CTTCAAGGAGATTCCTTTGA+AGG 0.385860 5:-64451543 MsG0580027618.01.T01:CDS
ATTATTTGGGCTGGTTATCC+TGG 0.393707 5:-64447894 MsG0580027618.01.T01:CDS
CAAATTGTAATCTGCACAGT+TGG 0.398296 5:+64450392 None:intergenic
ACCAAACATAAACATATTTA+GGG 0.398770 5:-64451649 MsG0580027618.01.T01:CDS
GTACGATGCAACTATGAAAT+GGG 0.407324 5:+64450466 None:intergenic
CAAGCCTAGTCTTATTCTAA+TGG 0.410715 5:+64448475 None:intergenic
AATTGTGCCATATTGGAGTT+TGG 0.412583 5:+64448436 None:intergenic
GCTGGTTATCCTGGTGAACT+TGG 0.414067 5:-64447885 MsG0580027618.01.T01:CDS
ACTCCAAGGGTATTTACTCT+TGG 0.414446 5:+64448311 None:intergenic
TGTACGATGCAACTATGAAA+TGG 0.417595 5:+64450465 None:intergenic
AACAGCTGGTGAAGATCCTT+TGG 0.418172 5:-64451601 MsG0580027618.01.T01:CDS
AATCCAACCAAACTCCAATA+TGG 0.420174 5:-64448443 MsG0580027618.01.T01:CDS
ATAAGTTCTTGTTGCTTACC+AGG 0.420429 5:+64448020 None:intergenic
AAACTCCAATATGGCACAAT+TGG 0.421759 5:-64448434 MsG0580027618.01.T01:CDS
ATAAGACTAGGCTTGTTTGA+TGG 0.425928 5:-64448467 MsG0580027618.01.T01:CDS
GTGCCCAAAACGTCATCCCT+TGG 0.426062 5:+64451670 None:intergenic
ATCCAGAACGATAATGTGTT+TGG 0.439275 5:+64448183 None:intergenic
TCCTATGTAAGAGGACTTCA+AGG 0.442093 5:-64451558 MsG0580027618.01.T01:CDS
TGCCCAAAACGTCATCCCTT+GGG 0.443887 5:+64451671 None:intergenic
GTGTTTGGTGACTATAACCC+TGG 0.452505 5:-64447840 MsG0580027618.01.T01:CDS
TATGCTGTTTCCTATGTAAG+AGG 0.453127 5:-64451567 MsG0580027618.01.T01:CDS
CTTCCAATGATCCAAATCAT+AGG 0.458620 5:+64451464 None:intergenic
AATTAGTTTCCCACCTTCAA+AGG 0.461085 5:+64451530 None:intergenic
TAAGACTAGGCTTGTTTGAT+GGG 0.462964 5:-64448466 MsG0580027618.01.T01:CDS
ACATATTTAGGGACCCAAGA+TGG 0.464899 5:-64451638 MsG0580027618.01.T01:CDS
TTAGCAAAAGTAATATCAAC+AGG 0.467973 5:+64447939 None:intergenic
TGGCTCTTTGAGTGATGGTA+AGG 0.468209 5:+64452286 None:intergenic
GGTAAGGTTGAGATTGCAAA+AGG 0.475896 5:+64452302 None:intergenic
GCAAGAGGAGTGTACAGTGC+TGG 0.477994 5:-64451699 MsG0580027618.01.T01:CDS
CATATTTAGGGACCCAAGAT+GGG 0.480274 5:-64451637 MsG0580027618.01.T01:CDS
GAGCCGTGACACAATGTCTT+TGG 0.481669 5:+64452266 None:intergenic
TTTCATAGTTGCATCGTACA+AGG 0.486662 5:-64450462 MsG0580027618.01.T01:CDS
CTATGATTTGGATCATTGGA+AGG 0.493202 5:-64451463 MsG0580027618.01.T01:CDS
CAAGGAGATTCCTTTGAAGG+TGG 0.495290 5:-64451540 MsG0580027618.01.T01:CDS
GGTTATCCTGGTGAACTTGG+TGG 0.497246 5:-64447882 MsG0580027618.01.T01:CDS
GGTGTTGCTAATGCTGGTAA+AGG 0.497484 5:-64452147 MsG0580027618.01.T01:CDS
GTGTTGCTAATGCTGGTAAA+GGG 0.502533 5:-64452146 MsG0580027618.01.T01:CDS
TCATCCCACCATTGGTAACT+CGG 0.503578 5:+64452180 None:intergenic
AGGTACATTAGTCGGTGAAT+CGG 0.504246 5:+64452368 None:intergenic
GTCTTTGGCTCTTTGAGTGA+TGG 0.506861 5:+64452281 None:intergenic
ATCCTGGTGAACTTGGTGGA+AGG 0.508629 5:-64447878 MsG0580027618.01.T01:CDS
AAGAATAATGACAAAATTGG+AGG 0.510297 5:-64447918 MsG0580027618.01.T01:CDS
TTGGAGATGTCACAGGAGTA+AGG 0.511401 5:+64452345 None:intergenic
CGGTATACCGAGTCGAGGAA+TGG 0.513844 5:+64452200 None:intergenic
AGAGATGATTTAGAGTTGCC+TGG 0.517802 5:-64448038 MsG0580027618.01.T01:CDS
CTTTGGCATCAAAATCAAAA+CGG 0.518275 5:+64451433 None:intergenic
AGCATAGAAGAAAACTAACC+AGG 0.519401 5:+64447822 None:intergenic
ACATCAGCTACAGCATCCTC+TGG 0.521946 5:+64449924 None:intergenic
GGTCACTTTGCAAGATTTGG+CGG 0.522111 5:-64450502 MsG0580027618.01.T01:CDS
TGCCAAAGCTTCTAAGAAGC+CGG 0.524198 5:-64447988 MsG0580027618.01.T01:CDS
CAGCTTCAAGAGCAACGTCT+AGG 0.524868 5:+64448384 None:intergenic
TACAGTGCTGGGCAAGCCCA+AGG 0.526959 5:-64451687 MsG0580027618.01.T01:CDS
CTTCCAAGAGTAAATACCCT+TGG 0.531258 5:-64448314 MsG0580027618.01.T01:CDS
ATACCGAGTCGAGGAATGGC+AGG 0.534851 5:+64452204 None:intergenic
CAAGAGGAGTGTACAGTGCT+GGG 0.536393 5:-64451698 MsG0580027618.01.T01:CDS
TCCTGGTGAACTTGGTGGAA+GGG 0.537602 5:-64447877 MsG0580027618.01.T01:CDS
AGGGTATTTACTCTTGGAAG+CGG 0.539975 5:+64448317 None:intergenic
CAGCAGTAAGAATAACTTGA+GGG 0.540873 5:+64452085 None:intergenic
GGTAAAGGGATAAGATTGAA+TGG 0.541496 5:-64452132 MsG0580027618.01.T01:CDS
AGAATCATATATGATAATCA+AGG 0.545803 5:-64449960 MsG0580027618.01.T01:CDS
TCTTGGAAGCGGGAGAATTG+AGG 0.545957 5:+64448328 None:intergenic
GTGCCATATTGGAGTTTGGT+TGG 0.546323 5:+64448440 None:intergenic
AAATTGTAATCTGCACAGTT+GGG 0.547401 5:+64450393 None:intergenic
ATTGGAGGGATTATTTGGGC+TGG 0.549271 5:-64447903 MsG0580027618.01.T01:CDS
AAGGAGATTCCTTTGAAGGT+GGG 0.551664 5:-64451539 MsG0580027618.01.T01:CDS
GCCCTTCCACCAAGTTCACC+AGG 0.555057 5:+64447876 None:intergenic
GGGTATTTACTCTTGGAAGC+GGG 0.555910 5:+64448318 None:intergenic
AATGGTGAATAGATTGTGTA+GGG 0.557476 5:+64448493 None:intergenic
GCAACGCTTCATCCCACCAT+TGG 0.558380 5:+64452172 None:intergenic
ACTTTGGTACCAAATCAGTA+AGG 0.558508 5:-64452046 MsG0580027618.01.T01:intron
TAAGGTTGAGATTGCAAAAG+GGG 0.559131 5:+64452304 None:intergenic
AATATTGGTACTAATCTACA+AGG 0.562148 5:+64448230 None:intergenic
AGGGACCCAAGATGGGGAAG+AGG 0.563005 5:-64451630 MsG0580027618.01.T01:CDS
TGTGCTTACAACCGTGTCAA+TGG 0.565395 5:-64450420 MsG0580027618.01.T01:CDS
GTGAATCGGCATGAACGAGT+TGG 0.570073 5:+64452382 None:intergenic
GAAGGTGGGAAACTAATTGG+AGG 0.571323 5:-64451525 MsG0580027618.01.T01:CDS
TCCTTGAAGTCCTCTTACAT+AGG 0.571602 5:+64451557 None:intergenic
TAATGGTGAATAGATTGTGT+AGG 0.575658 5:+64448492 None:intergenic
GTAAGGTTGAGATTGCAAAA+GGG 0.580172 5:+64452303 None:intergenic
ACATACATCCCCTCACAGCA+TGG 0.580506 5:-64452457 MsG0580027618.01.T01:CDS
CATTGTGTCACGGCTCACAT+TGG 0.582035 5:-64452259 MsG0580027618.01.T01:CDS
TTGCACGGTGTTGCTAATGC+TGG 0.589612 5:-64452153 MsG0580027618.01.T01:CDS
TATGATTTGGATCATTGGAA+GGG 0.590213 5:-64451462 MsG0580027618.01.T01:CDS
GAGTAAGGAGGTACATTAGT+CGG 0.591459 5:+64452360 None:intergenic
GTAGCTGATGTACTTCAAGC+TGG 0.594292 5:-64449912 MsG0580027618.01.T01:intron
CATTAGGGCCTATAACTCCA+AGG 0.594911 5:+64448297 None:intergenic
AAAAGTGACCCATGCTGTGA+GGG 0.599006 5:+64452448 None:intergenic
GCATAGAAGAAAACTAACCA+GGG 0.603236 5:+64447823 None:intergenic
GGAAGAGGACAAGAAACAGC+TGG 0.605215 5:-64451615 MsG0580027618.01.T01:CDS
AGAATAATGACAAAATTGGA+GGG 0.611667 5:-64447917 MsG0580027618.01.T01:CDS
ACGTGGGTTGGAGATGTCAC+AGG 0.612949 5:+64452338 None:intergenic
TACGATGCAACTATGAAATG+GGG 0.620644 5:+64450467 None:intergenic
ATCGTACAAGGACGATCTAG+TGG 0.621077 5:-64450450 MsG0580027618.01.T01:CDS
AGTTGGGAACGCCATTGACA+CGG 0.622852 5:+64450409 None:intergenic
CATACATCCCCTCACAGCAT+GGG 0.623938 5:-64452456 MsG0580027618.01.T01:CDS
GCTCCTGCCATTCCTCGACT+CGG 0.625159 5:-64452207 MsG0580027618.01.T01:CDS
GCAGCAGTAAGAATAACTTG+AGG 0.626019 5:+64452084 None:intergenic
GCTCTTGAAGCTGCAAGAAG+CGG 0.632910 5:-64448374 MsG0580027618.01.T01:CDS
TGAATAGATTGTGTAGGGCA+CGG 0.634890 5:+64448498 None:intergenic
ATTGGATCAAAGTCAAGAGA+GGG 0.636383 5:-64448072 MsG0580027618.01.T01:CDS
TCGGTATACCGAGTTACCAA+TGG 0.640416 5:-64452188 MsG0580027618.01.T01:CDS
TAAAATCAGGTATATTACGT+CGG 0.641041 5:-64449997 MsG0580027618.01.T01:intron
GTGATTGGAACTGAGGCAAG+AGG 0.644411 5:-64451714 MsG0580027618.01.T01:CDS
ACAGTGCTGGGCAAGCCCAA+GGG 0.654556 5:-64451686 MsG0580027618.01.T01:CDS
GATTGGATCAAAGTCAAGAG+AGG 0.658616 5:-64448073 MsG0580027618.01.T01:CDS
GTATACCGAGTTACCAATGG+TGG 0.659642 5:-64452185 MsG0580027618.01.T01:CDS
ATTAGGGCCTATAACTCCAA+GGG 0.662705 5:+64448298 None:intergenic
GAGCCAAAGACATTGTGTCA+CGG 0.665561 5:-64452269 MsG0580027618.01.T01:CDS
TTGGTACTAATCTACAAGGA+CGG 0.668059 5:+64448234 None:intergenic
TTACTTGACAAAGCATGCAA+AGG 0.671287 5:-64448561 MsG0580027618.01.T01:CDS
TGGTGGGATGAAGCGTTGCA+CGG 0.676038 5:-64452168 MsG0580027618.01.T01:CDS
TATGTAGGTGATTGGAACTG+AGG 0.676313 5:-64451721 MsG0580027618.01.T01:intron
ATATTTAGGGACCCAAGATG+GGG 0.678025 5:-64451636 MsG0580027618.01.T01:CDS
TTCACCATTAGAATAAGACT+AGG 0.688029 5:-64448479 MsG0580027618.01.T01:CDS
TATACCGAGTTACCAATGGT+GGG 0.695458 5:-64452184 MsG0580027618.01.T01:CDS
TCAGGGATGGATGTAGAGTG+TGG 0.708529 5:-64448587 MsG0580027618.01.T01:intron
TAACTCGGTATACCGAGTCG+AGG 0.711678 5:+64452195 None:intergenic
GAGATGTCACAGGAGTAAGG+AGG 0.715685 5:+64452348 None:intergenic
GAAAAGTGACCCATGCTGTG+AGG 0.718805 5:+64452447 None:intergenic
AAAGTGACCCATGCTGTGAG+GGG 0.726647 5:+64452449 None:intergenic
ACGATGCAACTATGAAATGG+GGG 0.769347 5:+64450468 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTAATAAGAATTATTTTT+TGG - Chr5:64450275-64450294 MsG0580027618.01.T01:intron 10.0%
!! AAAAATAAGTATGAAGTAAA+GGG + Chr5:64450847-64450866 None:intergenic 15.0%
!! AAACAATATATTTAACAATG+TGG - Chr5:64450114-64450133 MsG0580027618.01.T01:intron 15.0%
!! AACAATATATTTAACAATGT+GGG - Chr5:64450115-64450134 MsG0580027618.01.T01:intron 15.0%
!! AACTAAAATACAAAATGATA+AGG + Chr5:64451220-64451239 None:intergenic 15.0%
!! ATCTTAATTAAAATGTATGT+AGG - Chr5:64448562-64448581 MsG0580027618.01.T01:CDS 15.0%
!! GAAATTAAAAAATGACAAAT+AGG - Chr5:64449440-64449459 MsG0580027618.01.T01:intron 15.0%
!!! AATAAGTGATTATGTTATTT+TGG - Chr5:64452196-64452215 MsG0580027618.01.T01:CDS 15.0%
!!! AGTTTAAAGATTTTAGTTTT+TGG - Chr5:64448357-64448376 MsG0580027618.01.T01:CDS 15.0%
!!! CTTATTTATAAGAGAAATTT+TGG - Chr5:64449107-64449126 MsG0580027618.01.T01:intron 15.0%
!!! TATTAAATCAACTATTCTTT+TGG + Chr5:64449418-64449437 None:intergenic 15.0%
!! AACAACTTTAGATGATTTAT+TGG + Chr5:64452027-64452046 None:intergenic 20.0%
!! AATTCAAAATGTGAAACAAA+AGG + Chr5:64449569-64449588 None:intergenic 20.0%
!! ACCAAACATAAACATATTTA+GGG - Chr5:64448649-64448668 MsG0580027618.01.T01:intron 20.0%
!! ACGGATTTAGATTATTTAAA+TGG + Chr5:64449764-64449783 None:intergenic 20.0%
!! AGAATCATATATGATAATCA+AGG - Chr5:64450338-64450357 MsG0580027618.01.T01:intron 20.0%
!! AGATTAGTACCAATATTAAA+AGG - Chr5:64452074-64452093 MsG0580027618.01.T01:CDS 20.0%
!! ATTTCTCTTATAAATAAGAC+CGG + Chr5:64449105-64449124 None:intergenic 20.0%
!! CTTAAAATGAATTTCAAACA+TGG + Chr5:64448295-64448314 None:intergenic 20.0%
!! GAAAAATAAGTATGAAGTAA+AGG + Chr5:64450848-64450867 None:intergenic 20.0%
!! GTTCTTACAAATTACAAAAT+TGG - Chr5:64450018-64450037 MsG0580027618.01.T01:intron 20.0%
!! TAATATAATTAGACCTACAT+TGG - Chr5:64451047-64451066 MsG0580027618.01.T01:intron 20.0%
!! TGAAAGAGATCTTAAAAAAA+AGG - Chr5:64451090-64451109 MsG0580027618.01.T01:intron 20.0%
!!! AAATCATCTAAAGTTGTTTT+AGG - Chr5:64452029-64452048 MsG0580027618.01.T01:intron 20.0%
!!! CTAATTGAAAGAAAGTTTTT+AGG + Chr5:64450808-64450827 None:intergenic 20.0%
!!! GATTATGTTATTTTGGTTAT+GGG - Chr5:64452203-64452222 MsG0580027618.01.T01:CDS 20.0%
!!! GTGTAAAATCCTTTTAATAT+TGG + Chr5:64452086-64452105 None:intergenic 20.0%
!!! GTTTTATATGTTTACCTTTT+AGG - Chr5:64450966-64450985 MsG0580027618.01.T01:intron 20.0%
!!! TATTTTTTGGTGTTAAAATC+AGG - Chr5:64450288-64450307 MsG0580027618.01.T01:intron 20.0%
!!! TGATTATGTTATTTTGGTTA+TGG - Chr5:64452202-64452221 MsG0580027618.01.T01:CDS 20.0%
! AAAAATGAAAGTAATGGTGA+TGG + Chr5:64447876-64447895 None:intergenic 25.0%
! AAACTAAACAAACAAGAACT+TGG + Chr5:64449520-64449539 None:intergenic 25.0%
! AAATATGTAGCTTCAAAAAG+AGG + Chr5:64450203-64450222 None:intergenic 25.0%
! AAATGTAGAAATGATACTTG+TGG - Chr5:64449045-64449064 MsG0580027618.01.T01:intron 25.0%
! AACTTATTCTCTATCCTAAA+AGG + Chr5:64450983-64451002 None:intergenic 25.0%
! AAGAATAATGACAAAATTGG+AGG - Chr5:64452380-64452399 MsG0580027618.01.T01:CDS 25.0%
! AAGTATCTATTTACCAATGT+AGG + Chr5:64451063-64451082 None:intergenic 25.0%
! AATATTGGTACTAATCTACA+AGG + Chr5:64452071-64452090 None:intergenic 25.0%
! AGAATAATGACAAAATTGGA+GGG - Chr5:64452381-64452400 MsG0580027618.01.T01:CDS 25.0%
! AGACAAAAATGGAATTTCAA+TGG - Chr5:64449944-64449963 MsG0580027618.01.T01:CDS 25.0%
! AGAGAAAAGAAAACTTACTT+TGG + Chr5:64448885-64448904 None:intergenic 25.0%
! ATATAGCTATTACGTGTTTA+CGG - Chr5:64450453-64450472 MsG0580027618.01.T01:CDS 25.0%
! ATCACGAGAATTAAAAAAGT+TGG - Chr5:64450912-64450931 MsG0580027618.01.T01:intron 25.0%
! ATTACTAGCAAAATCACATA+TGG - Chr5:64450637-64450656 MsG0580027618.01.T01:intron 25.0%
! CAATTATCTTTAGTCATGTT+AGG - Chr5:64449384-64449403 MsG0580027618.01.T01:intron 25.0%
! CACAAAATTACCAAAATAAC+CGG + Chr5:64452332-64452351 None:intergenic 25.0%
! CACAAGTACTATTATAATCA+AGG - Chr5:64451660-64451679 MsG0580027618.01.T01:CDS 25.0%
! CACCAAACATAAACATATTT+AGG - Chr5:64448648-64448667 MsG0580027618.01.T01:intron 25.0%
! CCAAACATTCTCTTATAAAT+AGG - Chr5:64449189-64449208 MsG0580027618.01.T01:intron 25.0%
! CCTATTTATAAGAGAATGTT+TGG + Chr5:64449192-64449211 None:intergenic 25.0%
! GAAGAGAAAAATGAAAGTAA+TGG + Chr5:64447882-64447901 None:intergenic 25.0%
! GACAAAAATGGAATTTCAAT+GGG - Chr5:64449945-64449964 MsG0580027618.01.T01:CDS 25.0%
! GACAATGTGACATTTAATTA+TGG - Chr5:64450533-64450552 MsG0580027618.01.T01:intron 25.0%
! GCTAAGAATAATGACAAAAT+TGG - Chr5:64452377-64452396 MsG0580027618.01.T01:CDS 25.0%
! TAAAATCAGGTATATTACGT+CGG - Chr5:64450301-64450320 MsG0580027618.01.T01:intron 25.0%
! TAAATCCGTTCTAATAATTC+AGG - Chr5:64449775-64449794 MsG0580027618.01.T01:intron 25.0%
! TAAGTGATTATAGAACTTAG+AGG + Chr5:64451445-64451464 None:intergenic 25.0%
! TAATAGTACTTGTGTATGTT+TGG + Chr5:64451654-64451673 None:intergenic 25.0%
! TAGATGATTTATTGGCATTA+GGG + Chr5:64452019-64452038 None:intergenic 25.0%
! TCCCTAAATATGTTTATGTT+TGG + Chr5:64448653-64448672 None:intergenic 25.0%
! TGGATCAATCTTAATTATCA+TGG + Chr5:64451298-64451317 None:intergenic 25.0%
! TGGTTATCTTACTTTATCAA+TGG - Chr5:64450553-64450572 MsG0580027618.01.T01:intron 25.0%
! TTAAAATGTATGTAGGTGAT+TGG - Chr5:64448569-64448588 MsG0580027618.01.T01:CDS 25.0%
! TTAGATGATTTATTGGCATT+AGG + Chr5:64452020-64452039 None:intergenic 25.0%
! TTAGCAAAAGTAATATCAAC+AGG + Chr5:64452362-64452381 None:intergenic 25.0%
! TTTAACCATAAAACTTAGAG+TGG + Chr5:64451322-64451341 None:intergenic 25.0%
! TTTCTCTTATAAATAAGACC+GGG + Chr5:64449104-64449123 None:intergenic 25.0%
! TTTGACCTAAACTAAAACTA+AGG + Chr5:64451414-64451433 None:intergenic 25.0%
!! AAAAGTTCACTTTCACATTT+TGG + Chr5:64450241-64450260 None:intergenic 25.0%
!! ACTTTTCTCAATTTGTAGTT+TGG - Chr5:64450590-64450609 MsG0580027618.01.T01:intron 25.0%
!! AGTAAGTTTTCTTTTCTCTA+TGG - Chr5:64448886-64448905 MsG0580027618.01.T01:intron 25.0%
!! TTGTGTAATCAAACTTTTCA+GGG - Chr5:64451694-64451713 MsG0580027618.01.T01:CDS 25.0%
!!! ATTTGCCTTAGTTTTAGTTT+AGG - Chr5:64451406-64451425 MsG0580027618.01.T01:intron 25.0%
!!! CATTTTAGTTGTTTAAGTTC+TGG - Chr5:64451174-64451193 MsG0580027618.01.T01:intron 25.0%
!!! GCATATTTTGAATTTACCAA+AGG + Chr5:64448716-64448735 None:intergenic 25.0%
!!! GTCTTAATTTTTTCACATTG+TGG - Chr5:64451348-64451367 MsG0580027618.01.T01:intron 25.0%
!!! GTTATTTTGGTAATTTTGTG+TGG - Chr5:64452332-64452351 MsG0580027618.01.T01:CDS 25.0%
!!! TTAACAAAAGTTGATGTATC+TGG + Chr5:64449169-64449188 None:intergenic 25.0%
!!! TTCATACTTATTTTTCTGAG+AGG - Chr5:64450852-64450871 MsG0580027618.01.T01:intron 25.0%
AAATTGTAATCTGCACAGTT+GGG + Chr5:64449908-64449927 None:intergenic 30.0%
AATGGTGAATAGATTGTGTA+GGG + Chr5:64451808-64451827 None:intergenic 30.0%
ACAAAATTGGAGGGATTATT+TGG - Chr5:64452390-64452409 MsG0580027618.01.T01:CDS 30.0%
AGTGACCTGAATTATTAGAA+CGG + Chr5:64449783-64449802 None:intergenic 30.0%
CAAAATTGGAGGGATTATTT+GGG - Chr5:64452391-64452410 MsG0580027618.01.T01:CDS 30.0%
CATTCTCTTATAAATAGGAC+CGG - Chr5:64449194-64449213 MsG0580027618.01.T01:intron 30.0%
CTTGGTTTAATGTCTATCAT+TGG - Chr5:64450770-64450789 MsG0580027618.01.T01:intron 30.0%
CTTTGGCATCAAAATCAAAA+CGG + Chr5:64448868-64448887 None:intergenic 30.0%
GACACTAAAATGATTCAAAC+CGG + Chr5:64448520-64448539 None:intergenic 30.0%
TAATGGTGAATAGATTGTGT+AGG + Chr5:64451809-64451828 None:intergenic 30.0%
TGATTTAGTCGATTAGATCT+TGG + Chr5:64450896-64450915 None:intergenic 30.0%
TTCATCAACGACATAAATCA+AGG + Chr5:64449324-64449343 None:intergenic 30.0%
TTCTCTTATAAATAAGACCG+GGG + Chr5:64449103-64449122 None:intergenic 30.0%
! ACATTTTACTGCCTATGATT+TGG - Chr5:64448823-64448842 MsG0580027618.01.T01:intron 30.0%
! AGTTACTAACCTTACTGATT+TGG + Chr5:64448264-64448283 None:intergenic 30.0%
! ATTGGAAGCACAAAATATGT+AGG - Chr5:64450036-64450055 MsG0580027618.01.T01:intron 30.0%
! CTTTTGGATGATTAATTCTG+CGG - Chr5:64448918-64448937 MsG0580027618.01.T01:intron 30.0%
! GTTGTGTAATCAAACTTTTC+AGG - Chr5:64451693-64451712 MsG0580027618.01.T01:CDS 30.0%
! TAAATCCAGCTGTGAATTTT+TGG + Chr5:64450729-64450748 None:intergenic 30.0%
! TATGATTTGGATCATTGGAA+GGG - Chr5:64448836-64448855 MsG0580027618.01.T01:intron 30.0%
! TCTATGGTATATAGTCCTTT+TGG - Chr5:64448902-64448921 MsG0580027618.01.T01:intron 30.0%
! TTATGTCGTTGATGAATACT+TGG - Chr5:64449328-64449347 MsG0580027618.01.T01:intron 30.0%
!! AGTATGCTATTTAACTTGCT+TGG + Chr5:64450706-64450725 None:intergenic 30.0%
!! ATTTTGGTAATTTTGTGTGG+TGG - Chr5:64452335-64452354 MsG0580027618.01.T01:CDS 30.0%
!!! GTTGTTTTAGGAAACTACTT+TGG - Chr5:64452041-64452060 MsG0580027618.01.T01:intron 30.0%
!!! TGTTATTTTGGTTATGGGAT+TGG - Chr5:64452208-64452227 MsG0580027618.01.T01:CDS 30.0%
AAACTCCAATATGGCACAAT+TGG - Chr5:64451864-64451883 MsG0580027618.01.T01:intron 35.0%
AACAATGTCTTACATAGCTC+TGG - Chr5:64449626-64449645 MsG0580027618.01.T01:intron 35.0%
AATCCAACCAAACTCCAATA+TGG - Chr5:64451855-64451874 MsG0580027618.01.T01:intron 35.0%
AATTGTGCCATATTGGAGTT+TGG + Chr5:64451865-64451884 None:intergenic 35.0%
ACCATAAAACTTAGAGTGGA+TGG + Chr5:64451318-64451337 None:intergenic 35.0%
ACGAAACTGAAAGACAAATC+AGG + Chr5:64449244-64449263 None:intergenic 35.0%
ACTTTGGTACCAAATCAGTA+AGG - Chr5:64448252-64448271 MsG0580027618.01.T01:CDS 35.0%
ATACTCCAAAAATTCACAGC+TGG - Chr5:64450721-64450740 MsG0580027618.01.T01:intron 35.0%
ATCCAGAACGATAATGTGTT+TGG + Chr5:64452118-64452137 None:intergenic 35.0%
ATTGGATCAAAGTCAAGAGA+GGG - Chr5:64452226-64452245 MsG0580027618.01.T01:CDS 35.0%
CAAATTGTAATCTGCACAGT+TGG + Chr5:64449909-64449928 None:intergenic 35.0%
CAGCAGTAAGAATAACTTGA+GGG + Chr5:64448216-64448235 None:intergenic 35.0%
CCAAAACTGCTAGACAAAAA+TGG - Chr5:64449933-64449952 MsG0580027618.01.T01:CDS 35.0%
CGCAGAATTAATCATCCAAA+AGG + Chr5:64448920-64448939 None:intergenic 35.0%
CTAAGTTTCACCAACTAAGT+AGG + Chr5:64450151-64450170 None:intergenic 35.0%
CTCACTATAAGACACAAATG+AGG + Chr5:64451259-64451278 None:intergenic 35.0%
CTCATTTGTGTCTTATAGTG+AGG - Chr5:64451257-64451276 MsG0580027618.01.T01:intron 35.0%
CTTCCAATGATCCAAATCAT+AGG + Chr5:64448837-64448856 None:intergenic 35.0%
CTTCGAGTATACTCTTCTAA+TGG - Chr5:64448491-64448510 MsG0580027618.01.T01:CDS 35.0%
GGTAAAGGGATAAGATTGAA+TGG - Chr5:64448166-64448185 MsG0580027618.01.T01:CDS 35.0%
GTAAATACCCTTGGAGTTAT+AGG - Chr5:64451993-64452012 MsG0580027618.01.T01:intron 35.0%
GTAAGGTTGAGATTGCAAAA+GGG + Chr5:64447998-64448017 None:intergenic 35.0%
GTACGATGCAACTATGAAAT+GGG + Chr5:64449835-64449854 None:intergenic 35.0%
TAAGGTTGAGATTGCAAAAG+GGG + Chr5:64447997-64448016 None:intergenic 35.0%
TACGATGCAACTATGAAATG+GGG + Chr5:64449834-64449853 None:intergenic 35.0%
TACTTTATCAATGGTCCCAA+TGG - Chr5:64450562-64450581 MsG0580027618.01.T01:intron 35.0%
TATACTCTTCTAATGGTCTC+CGG - Chr5:64448498-64448517 MsG0580027618.01.T01:CDS 35.0%
TCTCTTATAAATAAGACCGG+GGG + Chr5:64449102-64449121 None:intergenic 35.0%
TGTACGATGCAACTATGAAA+TGG + Chr5:64449836-64449855 None:intergenic 35.0%
TGTGTATCAAAGACTGTACT+TGG - Chr5:64450752-64450771 MsG0580027618.01.T01:intron 35.0%
TTACTTGACAAAGCATGCAA+AGG - Chr5:64451737-64451756 MsG0580027618.01.T01:intron 35.0%
TTGATCAACGGCATAAAACA+AGG + Chr5:64449593-64449612 None:intergenic 35.0%
TTGGTACTAATCTACAAGGA+CGG + Chr5:64452067-64452086 None:intergenic 35.0%
TTTCATAGTTGCATCGTACA+AGG - Chr5:64449836-64449855 MsG0580027618.01.T01:intron 35.0%
TTTGAAGGTGGGAAACTAAT+TGG - Chr5:64448770-64448789 MsG0580027618.01.T01:intron 35.0%
! AATTAGTTTCCCACCTTCAA+AGG + Chr5:64448771-64448790 None:intergenic 35.0%
! ATAAGTTCTTGTTGCTTACC+AGG + Chr5:64452281-64452300 None:intergenic 35.0%
! CATTAGAAGAGTATACTCGA+AGG + Chr5:64448493-64448512 None:intergenic 35.0%
! CTATGATTTGGATCATTGGA+AGG - Chr5:64448835-64448854 MsG0580027618.01.T01:intron 35.0%
! CTTCTTTTGATCCCAAACTT+TGG - Chr5:64448236-64448255 MsG0580027618.01.T01:CDS 35.0%
! TCCATCCACTCTAAGTTTTA+TGG - Chr5:64451314-64451333 MsG0580027618.01.T01:intron 35.0%
! TTACATCATTTTCTGCAACC+TGG + Chr5:64451030-64451049 None:intergenic 35.0%
! TTTTAGCAACTTCAACTGCT+CGG + Chr5:64452178-64452197 None:intergenic 35.0%
!! AAGTTCCAAGCATTGATCAA+CGG + Chr5:64449605-64449624 None:intergenic 35.0%
!! ACTGATTTGGTACCAAAGTT+TGG + Chr5:64448251-64448270 None:intergenic 35.0%
!! CCATTTTTGTCTAGCAGTTT+TGG + Chr5:64449936-64449955 None:intergenic 35.0%
!! CTGATTTGGTACCAAAGTTT+GGG + Chr5:64448250-64448269 None:intergenic 35.0%
!! GTAATCAAACTTTTCAGGGA+TGG - Chr5:64451698-64451717 MsG0580027618.01.T01:CDS 35.0%
!! TATGCTGTTTCCTATGTAAG+AGG - Chr5:64448731-64448750 MsG0580027618.01.T01:intron 35.0%
!! TGAGAAAAGTACCTTCCATT+GGG + Chr5:64450580-64450599 None:intergenic 35.0%
!! TTCTAAGAAGCCGGTTATTT+TGG - Chr5:64452319-64452338 MsG0580027618.01.T01:CDS 35.0%
!! TTGAGAAAAGTACCTTCCAT+TGG + Chr5:64450581-64450600 None:intergenic 35.0%
ACATATTTAGGGACCCAAGA+TGG - Chr5:64448660-64448679 MsG0580027618.01.T01:intron 40.0%
ACGATGCAACTATGAAATGG+GGG + Chr5:64449833-64449852 None:intergenic 40.0%
AGCCAAACACATTATCGTTC+TGG - Chr5:64452113-64452132 MsG0580027618.01.T01:CDS 40.0%
AGGTACATTAGTCGGTGAAT+CGG + Chr5:64447933-64447952 None:intergenic 40.0%
AGGTTATGCAAAAACACCAG+AGG - Chr5:64450358-64450377 MsG0580027618.01.T01:CDS 40.0%
ATATTTAGGGACCCAAGATG+GGG - Chr5:64448662-64448681 MsG0580027618.01.T01:intron 40.0%
ATTAGGGCCTATAACTCCAA+GGG + Chr5:64452003-64452022 None:intergenic 40.0%
CATATTTAGGGACCCAAGAT+GGG - Chr5:64448661-64448680 MsG0580027618.01.T01:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG - Chr5:64449198-64449217 MsG0580027618.01.T01:intron 40.0%
CTTCAAGGAGATTCCTTTGA+AGG - Chr5:64448755-64448774 MsG0580027618.01.T01:intron 40.0%
CTTCCAAGAGTAAATACCCT+TGG - Chr5:64451984-64452003 MsG0580027618.01.T01:intron 40.0%
GATTGGATCAAAGTCAAGAG+AGG - Chr5:64452225-64452244 MsG0580027618.01.T01:CDS 40.0%
GCAGCAGTAAGAATAACTTG+AGG + Chr5:64448217-64448236 None:intergenic 40.0%
GGGAGTGAGCACAAATAAAA+TGG + Chr5:64449082-64449101 None:intergenic 40.0%
GGGGACTCTAATGAAAATGT+GGG + Chr5:64450667-64450686 None:intergenic 40.0%
GGTAAGGTTGAGATTGCAAA+AGG + Chr5:64447999-64448018 None:intergenic 40.0%
GTCGATTAGATCTTGGTATG+AGG + Chr5:64450889-64450908 None:intergenic 40.0%
TATACCGAGTTACCAATGGT+GGG - Chr5:64448114-64448133 MsG0580027618.01.T01:CDS 40.0%
TATGTAGGTGATTGGAACTG+AGG - Chr5:64448577-64448596 MsG0580027618.01.T01:CDS 40.0%
TCAACCAACGTATCTATTCC+AGG - Chr5:64451009-64451028 MsG0580027618.01.T01:intron 40.0%
TCCTATGTAAGAGGACTTCA+AGG - Chr5:64448740-64448759 MsG0580027618.01.T01:intron 40.0%
TCCTTGAAGTCCTCTTACAT+AGG + Chr5:64448744-64448763 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - Chr5:64449197-64449216 MsG0580027618.01.T01:intron 40.0%
TGAATAGATTGTGTAGGGCA+CGG + Chr5:64451803-64451822 None:intergenic 40.0%
TGGGGACTCTAATGAAAATG+TGG + Chr5:64450668-64450687 None:intergenic 40.0%
TTAACAATGTGGGTGAGCAA+TGG - Chr5:64450125-64450144 MsG0580027618.01.T01:intron 40.0%
TTATCAATGGTCCCAATGGA+AGG - Chr5:64450566-64450585 MsG0580027618.01.T01:intron 40.0%
TTATGCCGTTGATCAATGCT+TGG - Chr5:64449597-64449616 MsG0580027618.01.T01:intron 40.0%
TTGGACCAATTGTGCCATAT+TGG + Chr5:64451872-64451891 None:intergenic 40.0%
TTTAGTTATGCCTTTGCCAG+TGG - Chr5:64451233-64451252 MsG0580027618.01.T01:intron 40.0%
TTTGGATCATTGGAAGGGTT+TGG - Chr5:64448841-64448860 MsG0580027618.01.T01:intron 40.0%
! AAGGAGATTCCTTTGAAGGT+GGG - Chr5:64448759-64448778 MsG0580027618.01.T01:intron 40.0%
! AAGGGGAAGAATTTTGTACG+TGG + Chr5:64447980-64447999 None:intergenic 40.0%
! AGAGATGATTTAGAGTTGCC+TGG - Chr5:64452260-64452279 MsG0580027618.01.T01:CDS 40.0%
! AGGGGAAGAATTTTGTACGT+GGG + Chr5:64447979-64447998 None:intergenic 40.0%
! AGGGTATTTACTCTTGGAAG+CGG + Chr5:64451984-64452003 None:intergenic 40.0%
! CTGCCTATGATTTGGATCAT+TGG - Chr5:64448831-64448850 MsG0580027618.01.T01:intron 40.0%
! GAAGAATTTTGTACGTGGGT+TGG + Chr5:64447975-64447994 None:intergenic 40.0%
! GAGTAAGGAGGTACATTAGT+CGG + Chr5:64447941-64447960 None:intergenic 40.0%
! GCACGGTCAATTTGAGATAT+TGG + Chr5:64451786-64451805 None:intergenic 40.0%
! GTGTTGCTAATGCTGGTAAA+GGG - Chr5:64448152-64448171 MsG0580027618.01.T01:CDS 40.0%
! TATCGTTCTGGATGTCTTGA+TGG - Chr5:64452125-64452144 MsG0580027618.01.T01:CDS 40.0%
! TCAGGTCACTTTGCAAGATT+TGG - Chr5:64449793-64449812 MsG0580027618.01.T01:intron 40.0%
! TTTGGATCATGAGGTGGTTT+TGG - Chr5:64449650-64449669 MsG0580027618.01.T01:intron 40.0%
!! ACTCCAAGGGTATTTACTCT+TGG + Chr5:64451990-64452009 None:intergenic 40.0%
!! ATTATTTGGGCTGGTTATCC+TGG - Chr5:64452404-64452423 MsG0580027618.01.T01:CDS 40.0%
!! CTATTTAACTTGCTTGGCGT+GGG + Chr5:64450700-64450719 None:intergenic 40.0%
!! TATTTAACTTGCTTGGCGTG+GGG + Chr5:64450699-64450718 None:intergenic 40.0%
!! TCTTTAGAGCAGACTTGGTT+TGG + Chr5:64451891-64451910 None:intergenic 40.0%
!!! GAGGTGGTTTTGGATACATT+TGG - Chr5:64449660-64449679 MsG0580027618.01.T01:intron 40.0%
!!! GGTTTTCTTTAGAGCAGACT+TGG + Chr5:64451896-64451915 None:intergenic 40.0%
!!! GTCTTACATAGCTCTGGTTT+TGG - Chr5:64449632-64449651 MsG0580027618.01.T01:intron 40.0%
AAAAGTGACCCATGCTGTGA+GGG + Chr5:64447853-64447872 None:intergenic 45.0%
AACAGCTGGTGAAGATCCTT+TGG - Chr5:64448697-64448716 MsG0580027618.01.T01:intron 45.0%
AGATTGAATGGCAGTGTTGC+AGG - Chr5:64448178-64448197 MsG0580027618.01.T01:CDS 45.0%
ATCGTACAAGGACGATCTAG+TGG - Chr5:64449848-64449867 MsG0580027618.01.T01:intron 45.0%
ATTGGAGGGATTATTTGGGC+TGG - Chr5:64452395-64452414 MsG0580027618.01.T01:CDS 45.0%
CATTAGGGCCTATAACTCCA+AGG + Chr5:64452004-64452023 None:intergenic 45.0%
CTGAAAGACAAATCAGGCGA+CGG + Chr5:64449238-64449257 None:intergenic 45.0%
GAAGGTGGGAAACTAATTGG+AGG - Chr5:64448773-64448792 MsG0580027618.01.T01:intron 45.0%
GAGCCAAAGACATTGTGTCA+CGG - Chr5:64448029-64448048 MsG0580027618.01.T01:CDS 45.0%
GCAACCTGGAATAGATACGT+TGG + Chr5:64451016-64451035 None:intergenic 45.0%
GCTTTGTCTAATACTCCCTC+CGG + Chr5:64449216-64449235 None:intergenic 45.0%
GGGTATTTACTCTTGGAAGC+GGG + Chr5:64451983-64452002 None:intergenic 45.0%
GTAGCTGATGTACTTCAAGC+TGG - Chr5:64450386-64450405 MsG0580027618.01.T01:CDS 45.0%
GTATACCGAGTTACCAATGG+TGG - Chr5:64448113-64448132 MsG0580027618.01.T01:CDS 45.0%
GTGCCATATTGGAGTTTGGT+TGG + Chr5:64451861-64451880 None:intergenic 45.0%
TAAGACACAAATGAGGCCAC+TGG + Chr5:64451252-64451271 None:intergenic 45.0%
TCGGTATACCGAGTTACCAA+TGG - Chr5:64448110-64448129 MsG0580027618.01.T01:CDS 45.0%
TGAGCAATGGCCTACTTAGT+TGG - Chr5:64450138-64450157 MsG0580027618.01.T01:intron 45.0%
TGGCTCTTTGAGTGATGGTA+AGG + Chr5:64448015-64448034 None:intergenic 45.0%
TGTGCTTACAACCGTGTCAA+TGG - Chr5:64449878-64449897 MsG0580027618.01.T01:intron 45.0%
TTGGAGATGTCACAGGAGTA+AGG + Chr5:64447956-64447975 None:intergenic 45.0%
TTGGCGTGGGGAATATATGT+GGG + Chr5:64450687-64450706 None:intergenic 45.0%
TTTATTTGTGCTCACTCCCC+CGG - Chr5:64449083-64449102 MsG0580027618.01.T01:intron 45.0%
! AACCGGCTTCTTAGAAGCTT+TGG + Chr5:64452315-64452334 None:intergenic 45.0%
! CAAGGAGATTCCTTTGAAGG+TGG - Chr5:64448758-64448777 MsG0580027618.01.T01:intron 45.0%
! GGTCACTTTGCAAGATTTGG+CGG - Chr5:64449796-64449815 MsG0580027618.01.T01:intron 45.0%
! GTGTTTGGTGACTATAACCC+TGG - Chr5:64452458-64452477 MsG0580027618.01.T01:CDS 45.0%
! TCATCCCACCATTGGTAACT+CGG + Chr5:64448121-64448140 None:intergenic 45.0%
! TGCCAAAGCTTCTAAGAAGC+CGG - Chr5:64452310-64452329 MsG0580027618.01.T01:CDS 45.0%
!! GCTATTTAACTTGCTTGGCG+TGG + Chr5:64450701-64450720 None:intergenic 45.0%
!! GGTGTTGCTAATGCTGGTAA+AGG - Chr5:64448151-64448170 MsG0580027618.01.T01:CDS 45.0%
!! GTCTTTGGCTCTTTGAGTGA+TGG + Chr5:64448020-64448039 None:intergenic 45.0%
!!! AGCTCTGGTTTTGGATCATG+AGG - Chr5:64449641-64449660 MsG0580027618.01.T01:intron 45.0%
!!! TCTGGTTTTGGATCATGAGG+TGG - Chr5:64449644-64449663 MsG0580027618.01.T01:intron 45.0%
AAAGTGACCCATGCTGTGAG+GGG + Chr5:64447852-64447871 None:intergenic 50.0%
ACAAATGAGGCCACTGGCAA+AGG + Chr5:64451246-64451265 None:intergenic 50.0%
ACATACATCCCCTCACAGCA+TGG - Chr5:64447841-64447860 MsG0580027618.01.T01:CDS 50.0%
ACATCAGCTACAGCATCCTC+TGG + Chr5:64450377-64450396 None:intergenic 50.0%
AGTTGGGAACGCCATTGACA+CGG + Chr5:64449892-64449911 None:intergenic 50.0%
CAGCTTCAAGAGCAACGTCT+AGG + Chr5:64451917-64451936 None:intergenic 50.0%
CATACATCCCCTCACAGCAT+GGG - Chr5:64447842-64447861 MsG0580027618.01.T01:CDS 50.0%
CATTGTGTCACGGCTCACAT+TGG - Chr5:64448039-64448058 MsG0580027618.01.T01:CDS 50.0%
CTTGGCGTGGGGAATATATG+TGG + Chr5:64450688-64450707 None:intergenic 50.0%
CTTGTCCTCTTCCCCATCTT+GGG + Chr5:64448676-64448695 None:intergenic 50.0%
GAAAAGTGACCCATGCTGTG+AGG + Chr5:64447854-64447873 None:intergenic 50.0%
GAGATGTCACAGGAGTAAGG+AGG + Chr5:64447953-64447972 None:intergenic 50.0%
GAGCCGTGACACAATGTCTT+TGG + Chr5:64448035-64448054 None:intergenic 50.0%
GCTCTTGAAGCTGCAAGAAG+CGG - Chr5:64451924-64451943 MsG0580027618.01.T01:intron 50.0%
GCTGGTTATCCTGGTGAACT+TGG - Chr5:64452413-64452432 MsG0580027618.01.T01:CDS 50.0%
GGAAGAGGACAAGAAACAGC+TGG - Chr5:64448683-64448702 MsG0580027618.01.T01:intron 50.0%
GGTTATCCTGGTGAACTTGG+TGG - Chr5:64452416-64452435 MsG0580027618.01.T01:CDS 50.0%
GTGAATCGGCATGAACGAGT+TGG + Chr5:64447919-64447938 None:intergenic 50.0%
GTGATTGGAACTGAGGCAAG+AGG - Chr5:64448584-64448603 MsG0580027618.01.T01:CDS 50.0%
TAACTCGGTATACCGAGTCG+AGG + Chr5:64448106-64448125 None:intergenic 50.0%
TCAGGGATGGATGTAGAGTG+TGG - Chr5:64451711-64451730 MsG0580027618.01.T01:CDS 50.0%
TCTTGGAAGCGGGAGAATTG+AGG + Chr5:64451973-64451992 None:intergenic 50.0%
TCTTGTCCTCTTCCCCATCT+TGG + Chr5:64448677-64448696 None:intergenic 50.0%
TGCCCAAAACGTCATCCCTT+GGG + Chr5:64448630-64448649 None:intergenic 50.0%
TGGCGTGGGGAATATATGTG+GGG + Chr5:64450686-64450705 None:intergenic 50.0%
! AAGCCCAAGGGATGACGTTT+TGG - Chr5:64448624-64448643 MsG0580027618.01.T01:intron 50.0%
! AGCCCAAGGGATGACGTTTT+GGG - Chr5:64448625-64448644 MsG0580027618.01.T01:intron 50.0%
! ATCCTGGTGAACTTGGTGGA+AGG - Chr5:64452420-64452439 MsG0580027618.01.T01:CDS 50.0%
! CAAGAGGAGTGTACAGTGCT+GGG - Chr5:64448600-64448619 MsG0580027618.01.T01:intron 50.0%
! GCTCTTGCTCAGGTTGTGTT+TGG - Chr5:64452443-64452462 MsG0580027618.01.T01:CDS 50.0%
! TCCTGGTGAACTTGGTGGAA+GGG - Chr5:64452421-64452440 MsG0580027618.01.T01:CDS 50.0%
!! TTGCACGGTGTTGCTAATGC+TGG - Chr5:64448145-64448164 MsG0580027618.01.T01:CDS 50.0%
ATACCGAGTCGAGGAATGGC+AGG + Chr5:64448097-64448116 None:intergenic 55.0%
CGGTATACCGAGTCGAGGAA+TGG + Chr5:64448101-64448120 None:intergenic 55.0%
GCAACGCTTCATCCCACCAT+TGG + Chr5:64448129-64448148 None:intergenic 55.0%
GTGCCCAAAACGTCATCCCT+TGG + Chr5:64448631-64448650 None:intergenic 55.0%
! GCAAGAGGAGTGTACAGTGC+TGG - Chr5:64448599-64448618 MsG0580027618.01.T01:intron 55.0%
!! ACGTGGGTTGGAGATGTCAC+AGG + Chr5:64447963-64447982 None:intergenic 55.0%
!! TGGTGGGATGAAGCGTTGCA+CGG - Chr5:64448130-64448149 MsG0580027618.01.T01:CDS 55.0%
AGGGACCCAAGATGGGGAAG+AGG - Chr5:64448668-64448687 MsG0580027618.01.T01:intron 60.0%
GCCCTTCCACCAAGTTCACC+AGG + Chr5:64452425-64452444 None:intergenic 60.0%
GCTCCTGCCATTCCTCGACT+CGG - Chr5:64448091-64448110 MsG0580027618.01.T01:CDS 60.0%
TGGTGGAAGGGCTCTTGCTC+AGG - Chr5:64452433-64452452 MsG0580027618.01.T01:CDS 60.0%
! ACAGTGCTGGGCAAGCCCAA+GGG - Chr5:64448612-64448631 MsG0580027618.01.T01:intron 60.0%
! TACAGTGCTGGGCAAGCCCA+AGG - Chr5:64448611-64448630 MsG0580027618.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 64447836 64452484 64447836 ID=MsG0580027618.01;Name=MsG0580027618.01
Chr5 mRNA 64447836 64452484 64447836 ID=MsG0580027618.01.T01;Parent=MsG0580027618.01;Name=MsG0580027618.01.T01;_AED=0.49;_eAED=0.49;_QI=0|1|0.6|1|1|1|5|0|592
Chr5 exon 64452047 64452484 64452047 ID=MsG0580027618.01.T01:exon:23096;Parent=MsG0580027618.01.T01
Chr5 exon 64451434 64451736 64451434 ID=MsG0580027618.01.T01:exon:23095;Parent=MsG0580027618.01.T01
Chr5 exon 64450354 64450523 64450354 ID=MsG0580027618.01.T01:exon:23094;Parent=MsG0580027618.01.T01
Chr5 exon 64449913 64450010 64449913 ID=MsG0580027618.01.T01:exon:23093;Parent=MsG0580027618.01.T01
Chr5 exon 64447836 64448605 64447836 ID=MsG0580027618.01.T01:exon:23092;Parent=MsG0580027618.01.T01
Chr5 CDS 64452047 64452484 64452047 ID=MsG0580027618.01.T01:cds;Parent=MsG0580027618.01.T01
Chr5 CDS 64451434 64451736 64451434 ID=MsG0580027618.01.T01:cds;Parent=MsG0580027618.01.T01
Chr5 CDS 64450354 64450523 64450354 ID=MsG0580027618.01.T01:cds;Parent=MsG0580027618.01.T01
Chr5 CDS 64449913 64450010 64449913 ID=MsG0580027618.01.T01:cds;Parent=MsG0580027618.01.T01
Chr5 CDS 64447836 64448605 64447836 ID=MsG0580027618.01.T01:cds;Parent=MsG0580027618.01.T01
Gene Sequence

>MsG0580027618.01.T01

CTGTTACATACATCCCCTCACAGCATGGGTCACTTTTCCATCACCATTACTTTCATTTTTCTCTTCTTAACTCGCTACAACCAACTCGTTCATGCCGATTCACCGACTAATGTACCTCCTTACTCCTGTGACATCTCCAACCCACGTACAAAATTCTTCCCCTTTTGCAATCTCAACCTTACCATCACTCAAAGAGCCAAAGACATTGTGTCACGGCTCACATTGGATGAGAAAATCTCTCAACTCGTTAACACAGCTCCTGCCATTCCTCGACTCGGTATACCGAGTTACCAATGGTGGGATGAAGCGTTGCACGGTGTTGCTAATGCTGGTAAAGGGATAAGATTGAATGGCAGTGTTGCAGGTGCTACTAGTTTCCCTCAAGTTATTCTTACTGCTGCTTCTTTTGATCCCAAACTTTGGTACCAAATCAGTAAGGTGATTGGAACTGAGGCAAGAGGAGTGTACAGTGCTGGGCAAGCCCAAGGGATGACGTTTTGGGCACCAAACATAAACATATTTAGGGACCCAAGATGGGGAAGAGGACAAGAAACAGCTGGTGAAGATCCTTTGGTAAATTCAAAATATGCTGTTTCCTATGTAAGAGGACTTCAAGGAGATTCCTTTGAAGGTGGGAAACTAATTGGAGGTCGTCTTAAAGCTTCTGCTTGTTGCAAACATTTTACTGCCTATGATTTGGATCATTGGAAGGGTTTGGACCGTTTTGATTTTGATGCCAAAGTCACTTTGCAAGATTTGGCGGATACGTATCAACCCCCATTTCATAGTTGCATCGTACAAGGACGATCTAGTGGAATAATGTGTGCTTACAACCGTGTCAATGGCGTTCCCAACTGTGCAGATTACAATTTGTTAACCAAAACTGCTAGACAAAAATGGAATTTCAATGGGTATATTACGTCGGATTGTGAAGCAGTAAGAATCATATATGATAATCAAGGTTATGCAAAAACACCAGAGGATGCTGTAGCTGATGTACTTCAAGCTGGGATGGATGTAGAGTGTGGTGATTACTTGACAAAGCATGCAAAGGCAGCAGTACTACAAAAAAAAGTACCAATATCTCAAATTGACCGTGCCCTACACAATCTATTCACCATTAGAATAAGACTAGGCTTGTTTGATGGGAATCCAACCAAACTCCAATATGGCACAATTGGTCCAAACCAAGTCTGCTCTAAAGAAAACCTAGACGTTGCTCTTGAAGCTGCAAGAAGCGGCATTGTACTTTTAAAAAACACTGCCTCAATTCTCCCGCTTCCAAGAGTAAATACCCTTGGAGTTATAGGCCCTAATGCCAATAAATCATCTAAAGTTGTTTTAGGAAACTACTTTGGCCGTCCTTGTAGATTAGTACCAATATTAAAAGGATTTTACACTTATGCTAGCCAAACACATTATCGTTCTGGATGTCTTGATGGAACAAAGTGTGCTTCAGCTGAAATCGACCGAGCAGTTGAAGTTGCTAAAATAAGTGATTATGTTATTTTGGTTATGGGATTGGATCAAAGTCAAGAGAGGGAATCACGCGATAGAGATGATTTAGAGTTGCCTGGTAAGCAACAAGAACTTATTAATAGTGTTGCCAAAGCTTCTAAGAAGCCGGTTATTTTGGTAATTTTGTGTGGTGGTCCTGTTGATATTACTTTTGCTAAGAATAATGACAAAATTGGAGGGATTATTTGGGCTGGTTATCCTGGTGAACTTGGTGGAAGGGCTCTTGCTCAGGTTGTGTTTGGTGACTATAACCCTGGTTAG
Protein sequence

>MsG0580027618.01.T01

LLHTSPHSMGHFSITITFIFLFLTRYNQLVHADSPTNVPPYSCDISNPRTKFFPFCNLNLTITQRAKDIVSRLTLDEKISQLVNTAPAIPRLGIPSYQWWDEALHGVANAGKGIRLNGSVAGATSFPQVILTAASFDPKLWYQISKVIGTEARGVYSAGQAQGMTFWAPNINIFRDPRWGRGQETAGEDPLVNSKYAVSYVRGLQGDSFEGGKLIGGRLKASACCKHFTAYDLDHWKGLDRFDFDAKVTLQDLADTYQPPFHSCIVQGRSSGIMCAYNRVNGVPNCADYNLLTKTARQKWNFNGYITSDCEAVRIIYDNQGYAKTPEDAVADVLQAGMDVECGDYLTKHAKAAVLQKKVPISQIDRALHNLFTIRIRLGLFDGNPTKLQYGTIGPNQVCSKENLDVALEAARSGIVLLKNTASILPLPRVNTLGVIGPNANKSSKVVLGNYFGRPCRLVPILKGFYTYASQTHYRSGCLDGTKCASAEIDRAVEVAKISDYVILVMGLDQSQERESRDRDDLELPGKQQELINSVAKASKKPVILVILCGGPVDITFAKNNDKIGGIIWAGYPGELGGRALAQVVFGDYNPG*