Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020847.01.T01 | XP_013456037.1 | 97.258 | 620 | 17 | 0 | 1 | 620 | 1 | 620 | 0 | 1210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020847.01.T01 | Q9LSS5 | 44.872 | 624 | 280 | 13 | 1 | 620 | 1 | 564 | 2.04E-145 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020847.01.T01 | A0A072ULW0 | 97.258 | 620 | 17 | 0 | 1 | 620 | 1 | 620 | 0.0 | 1210 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047974.01 | MsG0480020847.01 | 0.818082 | 2.359259e-52 | 1.748652e-49 |
| MsG0080048291.01 | MsG0480020847.01 | 0.825714 | 4.031430e-54 | 3.703642e-51 |
| MsG0080048298.01 | MsG0480020847.01 | 0.822398 | 2.419496e-53 | 2.022994e-50 |
| MsG0080048996.01 | MsG0480020847.01 | 0.824257 | 8.903029e-54 | 7.844823e-51 |
| MsG0080049140.01 | MsG0480020847.01 | 0.839430 | 1.592515e-57 | 2.198777e-54 |
| MsG0180000115.01 | MsG0480020847.01 | 0.804192 | 2.430350e-49 | 1.245175e-46 |
| MsG0180000314.01 | MsG0480020847.01 | 0.848545 | 5.725309e-60 | 1.054314e-56 |
| MsG0180000557.01 | MsG0480020847.01 | 0.827230 | 1.754441e-54 | 1.683513e-51 |
| MsG0180000983.01 | MsG0480020847.01 | 0.815150 | 1.071094e-51 | 7.326309e-49 |
| MsG0180002421.01 | MsG0480020847.01 | 0.835747 | 1.401544e-56 | 1.729874e-53 |
| MsG0180003427.01 | MsG0480020847.01 | 0.813815 | 2.114916e-51 | 1.395331e-48 |
| MsG0180003485.01 | MsG0480020847.01 | 0.810583 | 1.072384e-50 | 6.489271e-48 |
| MsG0180003656.01 | MsG0480020847.01 | 0.830400 | 3.000267e-55 | 3.157458e-52 |
| MsG0180003696.01 | MsG0480020847.01 | 0.828863 | 7.097209e-55 | 7.141407e-52 |
| MsG0180003920.01 | MsG0480020847.01 | 0.807974 | 3.887916e-50 | 2.196031e-47 |
| MsG0180004049.01 | MsG0480020847.01 | 0.849873 | 2.444696e-60 | 4.700864e-57 |
| MsG0180004099.01 | MsG0480020847.01 | 0.849783 | 2.591215e-60 | 4.967583e-57 |
| MsG0180004661.01 | MsG0480020847.01 | 0.803162 | 3.975413e-49 | 1.983672e-46 |
| MsG0180004711.01 | MsG0480020847.01 | 0.810810 | 9.577653e-51 | 5.830928e-48 |
| MsG0180004754.01 | MsG0480020847.01 | 0.818316 | 2.089454e-52 | 1.558751e-49 |
| MsG0180004958.01 | MsG0480020847.01 | 0.808590 | 2.874249e-50 | 1.649900e-47 |
| MsG0180005530.01 | MsG0480020847.01 | 0.812290 | 4.567738e-51 | 2.892782e-48 |
| MsG0180005587.01 | MsG0480020847.01 | 0.806657 | 7.395335e-50 | 4.036314e-47 |
| MsG0180005919.01 | MsG0480020847.01 | 0.829142 | 6.072267e-55 | 6.160939e-52 |
| MsG0180006000.01 | MsG0480020847.01 | 0.892447 | 1.573969e-74 | 1.439524e-70 |
| MsG0280006311.01 | MsG0480020847.01 | 0.828548 | 8.457086e-55 | 8.433114e-52 |
| MsG0280010650.01 | MsG0480020847.01 | 0.823746 | 1.173590e-53 | 1.019451e-50 |
| MsG0280010779.01 | MsG0480020847.01 | 0.850055 | 2.174956e-60 | 4.207703e-57 |
| MsG0280010886.01 | MsG0480020847.01 | 0.810751 | 9.863717e-51 | 5.995748e-48 |
| MsG0280010977.01 | MsG0480020847.01 | 0.890366 | 1.051531e-73 | 8.816181e-70 |
| MsG0280011014.01 | MsG0480020847.01 | 0.810114 | 1.354105e-50 | 8.093404e-48 |
| MsG0280011154.01 | MsG0480020847.01 | 0.820596 | 6.311028e-53 | 5.015015e-50 |
| MsG0280011416.01 | MsG0480020847.01 | 0.818376 | 2.024778e-52 | 1.513146e-49 |
| MsG0380012788.01 | MsG0480020847.01 | 0.809005 | 2.342607e-50 | 1.359559e-47 |
| MsG0380014668.01 | MsG0480020847.01 | 0.813883 | 2.043149e-51 | 1.350455e-48 |
| MsG0480018507.01 | MsG0480020847.01 | 0.801034 | 1.088955e-48 | 5.148095e-46 |
| MsG0480018517.01 | MsG0480020847.01 | 0.812178 | 4.831424e-51 | 3.050475e-48 |
| MsG0480019350.01 | MsG0480020847.01 | 0.803517 | 3.357593e-49 | 1.690718e-46 |
| MsG0480019710.01 | MsG0480020847.01 | 0.804245 | 2.369501e-49 | 1.215621e-46 |
| MsG0480019922.01 | MsG0480020847.01 | 0.823779 | 1.152506e-53 | 1.002073e-50 |
| MsG0480020402.01 | MsG0480020847.01 | 0.831331 | 1.773859e-55 | 1.918776e-52 |
| MsG0480020463.01 | MsG0480020847.01 | 0.836077 | 1.156084e-56 | 1.441257e-53 |
| MsG0480020495.01 | MsG0480020847.01 | 0.849571 | 2.968390e-60 | 5.651075e-57 |
| MsG0480020699.01 | MsG0480020847.01 | 0.872677 | 2.647079e-67 | 1.117571e-63 |
| MsG0480020847.01 | MsG0480020909.01 | 0.821189 | 4.607348e-53 | 3.722745e-50 |
| MsG0480020847.01 | MsG0480020965.01 | 0.846637 | 1.916525e-59 | 3.320141e-56 |
| MsG0480020847.01 | MsG0480021013.01 | 0.827913 | 1.203058e-54 | 1.177616e-51 |
| MsG0480020847.01 | MsG0480021450.01 | 0.824309 | 8.653596e-54 | 7.636053e-51 |
| MsG0480020847.01 | MsG0480022045.01 | 0.814629 | 1.397752e-51 | 9.427430e-49 |
| MsG0480020847.01 | MsG0480022076.01 | 0.860709 | 1.709794e-63 | 4.717659e-60 |
| MsG0480020847.01 | MsG0480022313.01 | 0.837503 | 5.001117e-57 | 6.509945e-54 |
| MsG0480020847.01 | MsG0480022325.01 | 0.806170 | 9.366830e-50 | 5.049668e-47 |
| MsG0480020847.01 | MsG0480022331.01 | 0.832108 | 1.141002e-55 | 1.262810e-52 |
| MsG0480020847.01 | MsG0480022549.01 | 0.813571 | 2.392662e-51 | 1.568151e-48 |
| MsG0480020847.01 | MsG0480022796.01 | 0.821555 | 3.794577e-53 | 3.097237e-50 |
| MsG0480020847.01 | MsG0480022998.01 | 0.877887 | 4.381190e-69 | 2.240466e-65 |
| MsG0480020847.01 | MsG0480023262.01 | 0.835087 | 2.058388e-56 | 2.490432e-53 |
| MsG0480020847.01 | MsG0480023296.01 | 0.840480 | 8.477267e-58 | 1.209060e-54 |
| MsG0480020847.01 | MsG0480023463.01 | 0.813657 | 2.291356e-51 | 1.505263e-48 |
| MsG0480020847.01 | MsG0480023647.01 | 0.828807 | 7.319784e-55 | 7.353753e-52 |
| MsG0480020847.01 | MsG0480023672.01 | 0.812970 | 3.242167e-51 | 2.090470e-48 |
| MsG0480020847.01 | MsG0480023762.01 | 0.839935 | 1.176268e-57 | 1.649591e-54 |
| MsG0480020847.01 | MsG0580024109.01 | 0.802349 | 5.852931e-49 | 2.860660e-46 |
| MsG0480020847.01 | MsG0580024317.01 | 0.863889 | 1.803669e-64 | 5.554728e-61 |
| MsG0480020847.01 | MsG0580024330.01 | 0.816425 | 5.566987e-52 | 3.943132e-49 |
| MsG0480020847.01 | MsG0580024358.01 | 0.854057 | 1.585616e-61 | 3.497892e-58 |
| MsG0480020847.01 | MsG0580024380.01 | 0.805789 | 1.126518e-49 | 6.014060e-47 |
| MsG0480020847.01 | MsG0580024462.01 | 0.845172 | 4.792859e-59 | 7.918802e-56 |
| MsG0480020847.01 | MsG0580024489.01 | 0.850225 | 1.948944e-60 | 3.791398e-57 |
| MsG0480020847.01 | MsG0580024722.01 | 0.860506 | 1.969371e-63 | 5.395885e-60 |
| MsG0480020847.01 | MsG0580024758.01 | 0.840563 | 8.064911e-58 | 1.153212e-54 |
| MsG0480020847.01 | MsG0580025124.01 | 0.804662 | 1.940173e-49 | 1.006150e-46 |
| MsG0480020847.01 | MsG0580025645.01 | 0.850573 | 1.556224e-60 | 3.061752e-57 |
| MsG0480020847.01 | MsG0580025766.01 | 0.801233 | 9.919176e-49 | 4.712708e-46 |
| MsG0480020847.01 | MsG0580026059.01 | 0.824388 | 8.293615e-54 | 7.335234e-51 |
| MsG0480020847.01 | MsG0580026089.01 | 0.818616 | 1.786158e-52 | 1.343515e-49 |
| MsG0480020847.01 | MsG0580026145.01 | 0.830762 | 2.446926e-55 | 2.602701e-52 |
| MsG0480020847.01 | MsG0580026186.01 | 0.800793 | 1.220001e-48 | 5.731831e-46 |
| MsG0480020847.01 | MsG0580026593.01 | 0.814886 | 1.225747e-51 | 8.324264e-49 |
| MsG0480020847.01 | MsG0580027431.01 | 0.807647 | 4.564032e-50 | 2.555838e-47 |
| MsG0480020847.01 | MsG0580027618.01 | 0.816189 | 6.288249e-52 | 4.425530e-49 |
| MsG0480020847.01 | MsG0580028060.01 | 0.807148 | 5.824078e-50 | 3.219456e-47 |
| MsG0480020847.01 | MsG0580028756.01 | 0.852230 | 5.291807e-61 | 1.098425e-57 |
| MsG0480020847.01 | MsG0580028776.01 | 0.809709 | 1.654498e-50 | 9.784636e-48 |
| MsG0480020847.01 | MsG0580029127.01 | 0.802322 | 5.928105e-49 | 2.895462e-46 |
| MsG0480020847.01 | MsG0580029298.01 | 0.833148 | 6.297555e-56 | 7.190208e-53 |
| MsG0480020847.01 | MsG0680030949.01 | 0.840172 | 1.020646e-57 | 1.442028e-54 |
| MsG0480020847.01 | MsG0680032935.01 | 0.809504 | 1.831158e-50 | 1.077013e-47 |
| MsG0480020847.01 | MsG0680034618.01 | 0.849078 | 4.072999e-60 | 7.632361e-57 |
| MsG0480020847.01 | MsG0680034853.01 | 0.843359 | 1.471011e-58 | 2.295947e-55 |
| MsG0480020847.01 | MsG0680035878.01 | 0.830284 | 3.201937e-55 | 3.358480e-52 |
| MsG0480020847.01 | MsG0780035954.01 | 0.868959 | 4.428802e-66 | 1.632749e-62 |
| MsG0480020847.01 | MsG0780036702.01 | 0.813277 | 2.776993e-51 | 1.805540e-48 |
| MsG0480020847.01 | MsG0780036752.01 | 0.856998 | 2.201540e-62 | 5.353117e-59 |
| MsG0480020847.01 | MsG0780036815.01 | 0.821664 | 3.580547e-53 | 2.931515e-50 |
| MsG0480020847.01 | MsG0780036816.01 | 0.821281 | 4.387851e-53 | 3.554110e-50 |
| MsG0480020847.01 | MsG0780038332.01 | 0.863835 | 1.874992e-64 | 5.763542e-61 |
| MsG0480020847.01 | MsG0780038987.01 | 0.810745 | 9.894008e-51 | 6.013201e-48 |
| MsG0480020847.01 | MsG0780039527.01 | 0.804461 | 2.136270e-49 | 1.102106e-46 |
| MsG0480020847.01 | MsG0780039866.01 | 0.802711 | 4.927712e-49 | 2.430738e-46 |
| MsG0480020847.01 | MsG0780040076.01 | 0.814294 | 1.657392e-51 | 1.107814e-48 |
| MsG0480020847.01 | MsG0780040100.01 | 0.809157 | 2.173663e-50 | 1.266731e-47 |
| MsG0480020847.01 | MsG0780040307.01 | 0.867280 | 1.537190e-65 | 5.336465e-62 |
| MsG0480020847.01 | MsG0780040472.01 | 0.808205 | 3.472492e-50 | 1.973446e-47 |
| MsG0480020847.01 | MsG0780040509.01 | 0.830902 | 2.260767e-55 | 2.414760e-52 |
| MsG0480020847.01 | MsG0780040533.01 | 0.813477 | 2.509164e-51 | 1.640399e-48 |
| MsG0480020847.01 | MsG0780040683.01 | 0.805148 | 1.535596e-49 | 8.063819e-47 |
| MsG0480020847.01 | MsG0780040828.01 | 0.806637 | 7.468110e-50 | 4.073905e-47 |
| MsG0480020847.01 | MsG0780040924.01 | 0.803297 | 3.728870e-49 | 1.867004e-46 |
| MsG0480020847.01 | MsG0780041063.01 | 0.899864 | 1.299066e-77 | 1.636203e-73 |
| MsG0480020847.01 | MsG0780041132.01 | 0.826936 | 2.063351e-54 | 1.963015e-51 |
| MsG0480020847.01 | MsG0780041579.01 | 0.831370 | 1.734440e-55 | 1.878412e-52 |
| MsG0480020847.01 | MsG0780041735.01 | 0.855186 | 7.469554e-62 | 1.709894e-58 |
| MsG0480020847.01 | MsG0880042091.01 | 0.811326 | 7.405280e-51 | 4.570063e-48 |
| MsG0480020847.01 | MsG0880042380.01 | 0.803839 | 2.878241e-49 | 1.461410e-46 |
| MsG0480020847.01 | MsG0880042544.01 | 0.830729 | 2.492923e-55 | 2.649085e-52 |
| MsG0480020847.01 | MsG0880042773.01 | 0.868371 | 6.861897e-66 | 2.476249e-62 |
| MsG0480020847.01 | MsG0880042791.01 | 0.824882 | 6.345182e-54 | 5.693237e-51 |
| MsG0480020847.01 | MsG0880042813.01 | 0.829489 | 5.003478e-55 | 5.128443e-52 |
| MsG0480020847.01 | MsG0880043516.01 | 0.802052 | 6.735660e-49 | 3.267189e-46 |
| MsG0480020847.01 | MsG0880043614.01 | 0.855637 | 5.521094e-62 | 1.283083e-58 |
| MsG0480020847.01 | MsG0880043637.01 | 0.871216 | 8.094115e-67 | 3.238768e-63 |
| MsG0480020847.01 | MsG0880044782.01 | 0.828088 | 1.091994e-54 | 1.074417e-51 |
| MsG0480020847.01 | MsG0880045430.01 | 0.859151 | 5.043608e-63 | 1.318859e-59 |
| MsG0480020847.01 | MsG0880045483.01 | 0.824251 | 8.933417e-54 | 7.870171e-51 |
| MsG0480020847.01 | MsG0880045785.01 | 0.800245 | 1.577325e-48 | 7.308617e-46 |
| MsG0480020847.01 | MsG0880045890.01 | 0.823970 | 1.039945e-53 | 9.089906e-51 |
| MsG0480020847.01 | MsG0880045915.01 | 0.837446 | 5.173125e-57 | 6.721697e-54 |
| MsG0480020847.01 | MsG0880046885.01 | 0.820323 | 7.289278e-53 | 5.748977e-50 |
| MsG0480020847.01 | MsG0880047059.01 | 0.813788 | 2.143610e-51 | 1.413204e-48 |
| MsG0480020847.01 | MsG0880047226.01 | 0.822736 | 2.019545e-53 | 1.704851e-50 |
| MsG0480020847.01 | MsG0880047666.01 | 0.801898 | 7.245582e-49 | 3.500858e-46 |
| MsG0380015350.01 | MsG0480020847.01 | 0.817320 | 3.505077e-52 | 2.544288e-49 |
| MsG0380015548.01 | MsG0480020847.01 | 0.835440 | 1.676292e-56 | 2.049950e-53 |
| MsG0380015549.01 | MsG0480020847.01 | 0.826834 | 2.182170e-54 | 2.069767e-51 |
| MsG0380015816.01 | MsG0480020847.01 | 0.806643 | 7.447813e-50 | 4.063416e-47 |
| MsG0380016140.01 | MsG0480020847.01 | 0.846927 | 1.596371e-59 | 2.791177e-56 |
| MsG0380016247.01 | MsG0480020847.01 | 0.815725 | 7.981089e-52 | 5.546284e-49 |
| MsG0380016703.01 | MsG0480020847.01 | 0.857800 | 1.275305e-62 | 3.185591e-59 |
| MsG0380016893.01 | MsG0480020847.01 | 0.825312 | 5.021293e-54 | 4.560501e-51 |
| MsG0380016920.01 | MsG0480020847.01 | 0.874218 | 8.021487e-68 | 3.581029e-64 |
| MsG0380016994.01 | MsG0480020847.01 | 0.811066 | 8.428751e-51 | 5.166629e-48 |
| MsG0380017061.01 | MsG0480020847.01 | 0.829728 | 4.375929e-55 | 4.517232e-52 |
| MsG0380017159.01 | MsG0480020847.01 | 0.858515 | 7.816510e-63 | 2.000030e-59 |
| MsG0380017164.01 | MsG0480020847.01 | 0.827613 | 1.420283e-54 | 1.377970e-51 |
| MsG0380017559.01 | MsG0480020847.01 | 0.809712 | 1.652436e-50 | 9.773098e-48 |
| MsG0380017996.01 | MsG0480020847.01 | 0.810804 | 9.606568e-51 | 5.847567e-48 |
| MsG0380018029.01 | MsG0480020847.01 | 0.806725 | 7.154372e-50 | 3.911877e-47 |
| MsG0480018397.01 | MsG0480020847.01 | 0.852377 | 4.803658e-61 | 1.001788e-57 |
| MsG0280006487.01 | MsG0480020847.01 | 0.817904 | 2.588599e-52 | 1.909332e-49 |
| MsG0280006540.01 | MsG0480020847.01 | 0.843635 | 1.241510e-58 | 1.954712e-55 |
| MsG0280006762.01 | MsG0480020847.01 | 0.839111 | 1.926748e-57 | 2.634047e-54 |
| MsG0280007359.01 | MsG0480020847.01 | 0.829145 | 6.065116e-55 | 6.154060e-52 |
| MsG0280007452.01 | MsG0480020847.01 | 0.806264 | 8.950190e-50 | 4.836679e-47 |
| MsG0280007997.01 | MsG0480020847.01 | 0.815080 | 1.110393e-51 | 7.580676e-49 |
| MsG0280008764.01 | MsG0480020847.01 | 0.803621 | 3.194172e-49 | 1.612718e-46 |
| MsG0280009752.01 | MsG0480020847.01 | 0.818252 | 2.160199e-52 | 1.608622e-49 |
| MsG0280009783.01 | MsG0480020847.01 | 0.824576 | 7.489154e-54 | 6.660601e-51 |
| MsG0280009794.01 | MsG0480020847.01 | 0.857439 | 1.631064e-62 | 4.025726e-59 |
| MsG0280010015.01 | MsG0480020847.01 | 0.838520 | 2.738615e-57 | 3.677274e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680035445.01 | MsG0480020847.01 | PPI |
| MsG0480020847.01 | MsG0380017686.01 | PPI |
| MsG0480020847.01 | MsG0180005941.01 | PPI |
| MsG0480020847.01 | MsG0680035359.01 | PPI |
| MsG0480020847.01 | MsG0880043487.01 | PPI |
| MsG0780039963.01 | MsG0480020847.01 | PPI |
| MsG0480020847.01 | MsG0780039966.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020847.01.T01 | MTR_4g461060 | 97.258 | 620 | 17 | 0 | 1 | 620 | 1 | 620 | 0.0 | 1210 |
| MsG0480020847.01.T01 | MTR_4g461060 | 97.236 | 615 | 17 | 0 | 6 | 620 | 3 | 617 | 0.0 | 1197 |
| MsG0480020847.01.T01 | MTR_7g100730 | 45.208 | 626 | 315 | 6 | 1 | 617 | 1 | 607 | 4.19e-143 | 429 |
| MsG0480020847.01.T01 | MTR_1g066850 | 44.532 | 631 | 288 | 10 | 1 | 617 | 1 | 583 | 1.35e-130 | 396 |
| MsG0480020847.01.T01 | MTR_2g093260 | 52.573 | 447 | 159 | 9 | 188 | 620 | 78 | 485 | 8.65e-119 | 362 |
| MsG0480020847.01.T01 | MTR_7g061150 | 46.543 | 376 | 177 | 5 | 248 | 617 | 3 | 360 | 5.63e-80 | 257 |
| MsG0480020847.01.T01 | MTR_2g093250 | 55.814 | 129 | 53 | 1 | 306 | 434 | 93 | 217 | 2.86e-32 | 125 |
| MsG0480020847.01.T01 | MTR_2g093240 | 46.296 | 108 | 29 | 2 | 513 | 620 | 3 | 81 | 5.35e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020847.01.T01 | AT5G60210 | 44.872 | 624 | 280 | 13 | 1 | 620 | 1 | 564 | 2.08e-146 | 436 |
| MsG0480020847.01.T01 | AT5G60210 | 44.872 | 624 | 280 | 13 | 1 | 620 | 1 | 564 | 2.08e-146 | 436 |
| MsG0480020847.01.T01 | AT5G60210 | 44.872 | 624 | 280 | 13 | 1 | 620 | 1 | 564 | 2.08e-146 | 436 |
| MsG0480020847.01.T01 | AT5G60210 | 44.872 | 624 | 280 | 13 | 1 | 620 | 1 | 564 | 2.08e-146 | 436 |
| MsG0480020847.01.T01 | AT5G60210 | 44.750 | 619 | 278 | 13 | 6 | 620 | 30 | 588 | 1.37e-143 | 429 |
| MsG0480020847.01.T01 | AT5G60210 | 44.750 | 619 | 278 | 13 | 6 | 620 | 30 | 588 | 1.37e-143 | 429 |
| MsG0480020847.01.T01 | AT2G37080 | 40.769 | 650 | 286 | 13 | 1 | 620 | 1 | 581 | 1.12e-120 | 370 |
| MsG0480020847.01.T01 | AT2G37080 | 40.644 | 652 | 286 | 14 | 1 | 620 | 1 | 583 | 1.35e-118 | 365 |
| MsG0480020847.01.T01 | AT2G37080 | 40.644 | 652 | 286 | 14 | 1 | 620 | 1 | 583 | 1.35e-118 | 365 |
| MsG0480020847.01.T01 | AT3G53350 | 40.838 | 191 | 88 | 4 | 1 | 187 | 1 | 170 | 2.99e-30 | 123 |
| MsG0480020847.01.T01 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 176 | 394 | 2.76e-23 | 102 |
| MsG0480020847.01.T01 | AT3G53350 | 40.838 | 191 | 88 | 4 | 1 | 187 | 1 | 170 | 2.99e-30 | 123 |
| MsG0480020847.01.T01 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 176 | 394 | 2.76e-23 | 102 |
| MsG0480020847.01.T01 | AT3G53350 | 40.415 | 193 | 88 | 5 | 1 | 187 | 1 | 172 | 1.79e-28 | 118 |
| MsG0480020847.01.T01 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 178 | 396 | 3.07e-23 | 102 |
| MsG0480020847.01.T01 | AT3G53350 | 40.415 | 193 | 88 | 5 | 1 | 187 | 1 | 172 | 1.79e-28 | 118 |
| MsG0480020847.01.T01 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 178 | 396 | 3.07e-23 | 102 |
| MsG0480020847.01.T01 | AT3G53350 | 40.415 | 193 | 88 | 5 | 1 | 187 | 1 | 172 | 1.79e-28 | 118 |
| MsG0480020847.01.T01 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 178 | 396 | 3.07e-23 | 102 |
| MsG0480020847.01.T01 | AT3G53350 | 40.000 | 185 | 86 | 4 | 7 | 187 | 18 | 181 | 1.91e-26 | 112 |
| MsG0480020847.01.T01 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 187 | 405 | 1.09e-22 | 101 |
| MsG0480020847.01.T01 | AT3G53350 | 40.642 | 187 | 84 | 5 | 7 | 187 | 18 | 183 | 7.92e-25 | 107 |
| MsG0480020847.01.T01 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 189 | 407 | 8.37e-23 | 101 |
| MsG0480020847.01.T01 | AT3G53350 | 40.642 | 187 | 84 | 5 | 7 | 187 | 18 | 183 | 7.92e-25 | 107 |
| MsG0480020847.01.T01 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 189 | 407 | 8.37e-23 | 101 |
| MsG0480020847.01.T01 | AT3G53350 | 36.199 | 221 | 86 | 5 | 1 | 187 | 1 | 200 | 1.55e-24 | 107 |
| MsG0480020847.01.T01 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 206 | 424 | 1.00e-22 | 101 |
| MsG0480020847.01.T01 | AT1G78430 | 37.640 | 178 | 99 | 5 | 444 | 617 | 151 | 320 | 1.68e-18 | 87.4 |
| MsG0480020847.01.T01 | AT1G17140 | 34.254 | 181 | 98 | 4 | 449 | 617 | 169 | 340 | 4.03e-14 | 74.7 |
| MsG0480020847.01.T01 | AT1G17140 | 34.254 | 181 | 98 | 4 | 449 | 617 | 169 | 340 | 4.03e-14 | 74.7 |
Find 102 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATTTGTGCCTGAGTTTC+AGG | 0.158972 | 4:-49582577 | None:intergenic |
| TACCTCAGGAACTGGGCTTC+TGG | 0.169803 | 4:-49581566 | None:intergenic |
| TTTGAAGATTACCTTGTCTT+AGG | 0.184407 | 4:-49580564 | None:intergenic |
| AAAGAACCGTCGAGATTCTA+AGG | 0.289339 | 4:+49582635 | MsG0480020847.01.T01:CDS |
| TCAACATCTTCAGCATAATT+AGG | 0.312004 | 4:-49583639 | None:intergenic |
| ACCTCAGGAACTGGGCTTCT+GGG | 0.316608 | 4:-49581565 | None:intergenic |
| TACTGAGAGATCTGTGTCTT+TGG | 0.319421 | 4:+49583590 | MsG0480020847.01.T01:CDS |
| TCTTAGTTCGCTTTCCATTT+CGG | 0.319511 | 4:-49583484 | None:intergenic |
| TGCTTTGTCTTCTGCATTGA+AGG | 0.331152 | 4:+49582387 | MsG0480020847.01.T01:CDS |
| GGAAACATGCTGAAGAAGTT+TGG | 0.339421 | 4:+49583687 | MsG0480020847.01.T01:CDS |
| ATAATTAGGTGAATACTTAT+AGG | 0.350218 | 4:-49583625 | None:intergenic |
| CGGTCACCCTCGCCACTTTA+CGG | 0.350515 | 4:-49583431 | None:intergenic |
| TGACTTGCGATCAGCGAGTT+TGG | 0.351529 | 4:-49581542 | None:intergenic |
| GCACGCGGAGAAACTTTCTT+AGG | 0.360740 | 4:-49581427 | None:intergenic |
| ATCTCTTCTTCAATATGATT+AGG | 0.361618 | 4:-49582862 | None:intergenic |
| CCCCAGCAAAATATCTGAAT+TGG | 0.366490 | 4:+49582084 | MsG0480020847.01.T01:CDS |
| CAGCAATGCGTACGAGTTGA+TGG | 0.372307 | 4:+49582981 | MsG0480020847.01.T01:CDS |
| TGAAGAAGTTTGGAGTCTTA+TGG | 0.383316 | 4:+49583697 | MsG0480020847.01.T01:CDS |
| TTGAAGATTACCTTGTCTTA+GGG | 0.385906 | 4:-49580563 | None:intergenic |
| GTTCTTTGCTATTCTTGAGT+TGG | 0.389004 | 4:-49582555 | None:intergenic |
| CAACTCCATTGCTTTGGAGT+TGG | 0.399162 | 4:+49582687 | MsG0480020847.01.T01:CDS |
| AAACTTGTTACCTCAGGAAC+TGG | 0.401038 | 4:-49581574 | None:intergenic |
| GGCAGCTGCTGCTATGATTT+CGG | 0.401359 | 4:+49583548 | MsG0480020847.01.T01:CDS |
| CTTTAGCATCTCGTTCTCTT+CGG | 0.417380 | 4:-49583283 | None:intergenic |
| TCAAAAGGAACTCAAAAGAT+TGG | 0.417608 | 4:+49583197 | MsG0480020847.01.T01:CDS |
| TGGCTGCAACTCCATTGCTT+TGG | 0.418359 | 4:+49582681 | MsG0480020847.01.T01:CDS |
| CGCGAGGCGGTTACGAAACT+CGG | 0.423677 | 4:+49583378 | MsG0480020847.01.T01:CDS |
| GCTGAAAGCACAACTTGAAT+TGG | 0.425528 | 4:+49582420 | MsG0480020847.01.T01:CDS |
| GAAAGTGAAATATTGAGAAA+TGG | 0.426244 | 4:+49582832 | MsG0480020847.01.T01:CDS |
| AACTGATATTGAAGAGTTGA+AGG | 0.430741 | 4:+49583068 | MsG0480020847.01.T01:CDS |
| TATCTAGAGCTATGTGCTAC+TGG | 0.432289 | 4:+49582262 | MsG0480020847.01.T01:CDS |
| TGTTCTTTGAAATCTGAGAT+TGG | 0.434808 | 4:+49582886 | MsG0480020847.01.T01:CDS |
| AGAGTTGAAGGCTAATCTAA+TGG | 0.435601 | 4:+49583080 | MsG0480020847.01.T01:CDS |
| CCTCCAACTCACATTGTCTC+TGG | 0.446526 | 4:-49583026 | None:intergenic |
| AAATGAACATGGACTTCAAA+AGG | 0.449057 | 4:+49583182 | MsG0480020847.01.T01:CDS |
| GCAAGCTCAGCAAGACTTCG+AGG | 0.450128 | 4:+49582183 | MsG0480020847.01.T01:CDS |
| GTTGATGGAGCAGATAAAAT+CGG | 0.470705 | 4:+49582996 | MsG0480020847.01.T01:CDS |
| GAGCAGATAAAATCGGAATC+AGG | 0.477930 | 4:+49583003 | MsG0480020847.01.T01:CDS |
| AACCGAGTTGCAAGGTATCA+TGG | 0.481196 | 4:+49583110 | MsG0480020847.01.T01:CDS |
| AAGCGAACTAAGAAGGCTTA+AGG | 0.481520 | 4:+49583494 | MsG0480020847.01.T01:CDS |
| TAGGGCTAAGAGTTGCTCCT+TGG | 0.485611 | 4:-49582209 | None:intergenic |
| TCAAACTCAACAAGCTGAAT+CGG | 0.486664 | 4:+49582462 | MsG0480020847.01.T01:CDS |
| CAGAAGTGGTTCTTCTGAAG+TGG | 0.492122 | 4:+49581402 | MsG0480020847.01.T01:intron |
| ACAAGTGGCAAGCTCCGAAA+TGG | 0.492854 | 4:+49583470 | MsG0480020847.01.T01:CDS |
| TCATTCTGTTCAAAATCTTG+TGG | 0.494055 | 4:+49582789 | MsG0480020847.01.T01:CDS |
| GTCAACTGAGAGATGCTGTT+GGG | 0.495983 | 4:-49582359 | None:intergenic |
| GAAAATCAACAAGAGTTGCT+TGG | 0.499437 | 4:+49583308 | MsG0480020847.01.T01:CDS |
| CCAGAGACAATGTGAGTTGG+AGG | 0.499761 | 4:+49583026 | MsG0480020847.01.T01:CDS |
| TGATTTCGGCAGGGAACAAT+GGG | 0.505513 | 4:+49583562 | MsG0480020847.01.T01:CDS |
| ACTTCAAGATGATTTGAAGA+AGG | 0.507940 | 4:+49582123 | MsG0480020847.01.T01:CDS |
| GCTGCTGCTATGATTTCGGC+AGG | 0.511645 | 4:+49583552 | MsG0480020847.01.T01:CDS |
| ATGATTTCGGCAGGGAACAA+TGG | 0.513538 | 4:+49583561 | MsG0480020847.01.T01:CDS |
| CTTTGAAATCTGAGATTGGA+CGG | 0.519902 | 4:+49582890 | MsG0480020847.01.T01:CDS |
| TAGCAAAGAACCTGAAACTC+AGG | 0.524331 | 4:+49582567 | MsG0480020847.01.T01:CDS |
| GACGTTGCGAGAGACGTAGA+TGG | 0.528471 | 4:+49582661 | MsG0480020847.01.T01:CDS |
| ACGTGATAGCGCATGGAAGT+CGG | 0.536408 | 4:+49582324 | MsG0480020847.01.T01:CDS |
| AAATGGAAAGCGAACTAAGA+AGG | 0.538764 | 4:+49583487 | MsG0480020847.01.T01:CDS |
| TTCCATGATACCTTGCAACT+CGG | 0.542413 | 4:-49583112 | None:intergenic |
| AGACAGAAGCAACCGTAAAG+TGG | 0.543135 | 4:+49583419 | MsG0480020847.01.T01:CDS |
| ATCAGAATCACTTTCTCAGA+TGG | 0.543609 | 4:+49582519 | MsG0480020847.01.T01:CDS |
| GCAGTTAGAAGCAGCACAAG+TGG | 0.544851 | 4:+49583455 | MsG0480020847.01.T01:CDS |
| TTGTGCTGCTTCTAACTGCT+CGG | 0.545994 | 4:-49583451 | None:intergenic |
| TTGTTCTTGATATTTAGTCT+CGG | 0.554617 | 4:-49582935 | None:intergenic |
| TGAAGATTACCTTGTCTTAG+GGG | 0.562136 | 4:-49580562 | None:intergenic |
| TGAAATATTGAGAAATGGAG+AGG | 0.570445 | 4:+49582837 | MsG0480020847.01.T01:CDS |
| AACTTGTTACCTCAGGAACT+GGG | 0.572563 | 4:-49581573 | None:intergenic |
| AGATGATTTGAAGAAGGTGA+AGG | 0.573247 | 4:+49582129 | MsG0480020847.01.T01:CDS |
| AGGCCAGAGACAATGTGAGT+TGG | 0.574082 | 4:+49583023 | MsG0480020847.01.T01:CDS |
| AGTTGGAACATTCTAGAGCA+AGG | 0.576110 | 4:+49582704 | MsG0480020847.01.T01:CDS |
| CAGAAGAACGTGATAGCGCA+TGG | 0.577018 | 4:+49582317 | MsG0480020847.01.T01:CDS |
| TCAAACTAGTAAAATATCAA+AGG | 0.580215 | 4:+49581510 | MsG0480020847.01.T01:CDS |
| GCAAGACTTCGAGGAATCCA+AGG | 0.582107 | 4:+49582192 | MsG0480020847.01.T01:CDS |
| TACGAAACTCGGGATTGTGA+TGG | 0.584576 | 4:+49583389 | MsG0480020847.01.T01:CDS |
| GAAACTCGGGATTGTGATGG+AGG | 0.585195 | 4:+49583392 | MsG0480020847.01.T01:CDS |
| ATGTTCCAACTCCAAAGCAA+TGG | 0.588382 | 4:-49582692 | None:intergenic |
| TTAAGGTACAGTCTGATCAA+TGG | 0.588594 | 4:+49583511 | MsG0480020847.01.T01:CDS |
| AGCCGAGGCTGCAAAACGCG+AGG | 0.589775 | 4:+49583362 | MsG0480020847.01.T01:CDS |
| CTTGAATTGGTAGCTACTTG+TGG | 0.590895 | 4:+49582433 | MsG0480020847.01.T01:CDS |
| TGAATTGAAAGCTGATATGA+TGG | 0.591704 | 4:+49583233 | MsG0480020847.01.T01:CDS |
| ATGATTCAGACGAAATAAGC+TGG | 0.598473 | 4:-49582153 | None:intergenic |
| GGATGACAGTAAAGTGAGAG+AGG | 0.601699 | 4:+49583329 | MsG0480020847.01.T01:CDS |
| GAGTAGTCGTAGTTCTCAGT+TGG | 0.604285 | 4:-49581456 | None:intergenic |
| GGATGATTGTAAATTCGAGA+AGG | 0.605294 | 4:+49582810 | MsG0480020847.01.T01:CDS |
| GTTGGAACATTCTAGAGCAA+GGG | 0.613738 | 4:+49582705 | MsG0480020847.01.T01:CDS |
| ACCCAGAAGCCCAGTTCCTG+AGG | 0.615333 | 4:+49581564 | MsG0480020847.01.T01:CDS |
| ATGTCATCACAAAATGAACA+TGG | 0.616779 | 4:+49583171 | MsG0480020847.01.T01:CDS |
| CTCAGTTGGCGTACAGCACG+CGG | 0.616898 | 4:-49581442 | None:intergenic |
| GACAAGGAAACCGAGTTGCA+AGG | 0.617966 | 4:+49583102 | MsG0480020847.01.T01:CDS |
| CGAGGCTGCAAAACGCGAGG+CGG | 0.620966 | 4:+49583365 | MsG0480020847.01.T01:CDS |
| AAGCAACCGTAAAGTGGCGA+GGG | 0.625212 | 4:+49583425 | MsG0480020847.01.T01:CDS |
| ACAGTCTGATCAATGGAGGA+AGG | 0.630704 | 4:+49583518 | MsG0480020847.01.T01:CDS |
| GCGAGGCGGTTACGAAACTC+GGG | 0.631591 | 4:+49583379 | MsG0480020847.01.T01:CDS |
| AGTCAACTGAGAGATGCTGT+TGG | 0.631624 | 4:-49582360 | None:intergenic |
| CAATGCATACCCCTAAGACA+AGG | 0.632189 | 4:+49580553 | None:intergenic |
| TCAATGGAGGAAGGCTGCAG+AGG | 0.637395 | 4:+49583527 | MsG0480020847.01.T01:CDS |
| GAAGCAACCGTAAAGTGGCG+AGG | 0.639605 | 4:+49583424 | MsG0480020847.01.T01:CDS |
| GAAGGCTAATCTAATGGACA+AGG | 0.644778 | 4:+49583086 | MsG0480020847.01.T01:CDS |
| AGGTACAGTCTGATCAATGG+AGG | 0.656687 | 4:+49583514 | MsG0480020847.01.T01:CDS |
| GTCATCCCTTAGAATCTCGA+CGG | 0.658533 | 4:-49582641 | None:intergenic |
| CTGCTGCTATGATTTCGGCA+GGG | 0.663851 | 4:+49583553 | MsG0480020847.01.T01:CDS |
| AGAGGAAATAGAGAAAGCCG+AGG | 0.674506 | 4:+49583347 | MsG0480020847.01.T01:CDS |
| AAGAACCGTCGAGATTCTAA+GGG | 0.684529 | 4:+49582636 | MsG0480020847.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAACTATTATAATTGA+TGG | + | Chr4:49581966-49581985 | MsG0480020847.01.T01:intron | 10.0% |
| !! | AATACAAAAAAGTTATAATG+TGG | - | Chr4:49581177-49581196 | None:intergenic | 15.0% |
| !! | ATAATAACTGATAAAATAAG+CGG | - | Chr4:49581830-49581849 | None:intergenic | 15.0% |
| !!! | AATAACTTTTCTTTTTTTGA+AGG | + | Chr4:49581853-49581872 | MsG0480020847.01.T01:intron | 15.0% |
| !!! | TACTAGTACTTTTTTTTTAT+TGG | + | Chr4:49581147-49581166 | MsG0480020847.01.T01:intron | 15.0% |
| !!! | TTTTGGATTTTTTTTTTCAT+AGG | - | Chr4:49580857-49580876 | None:intergenic | 15.0% |
| !! | ATAATTAGGTGAATACTTAT+AGG | - | Chr4:49583628-49583647 | None:intergenic | 20.0% |
| !! | ATATAAGTTGTTTATACAAG+CGG | - | Chr4:49581782-49581801 | None:intergenic | 20.0% |
| !! | ATTGTTTAATAATGACAACA+AGG | + | Chr4:49581292-49581311 | MsG0480020847.01.T01:intron | 20.0% |
| !! | TACAAAATCTATGTTGTAAA+TGG | - | Chr4:49581352-49581371 | None:intergenic | 20.0% |
| !! | TACGAAAACAACATTTATAT+AGG | - | Chr4:49580615-49580634 | None:intergenic | 20.0% |
| !! | TCAAACTAGTAAAATATCAA+AGG | + | Chr4:49581510-49581529 | MsG0480020847.01.T01:CDS | 20.0% |
| !!! | ATTCTGATAAGTTTTGATTT+AGG | - | Chr4:49582507-49582526 | None:intergenic | 20.0% |
| !!! | CATTGTGATAAAATGAATTT+TGG | - | Chr4:49580874-49580893 | None:intergenic | 20.0% |
| !!! | TCATTATTGTATTTCCTTTT+TGG | + | Chr4:49581019-49581038 | MsG0480020847.01.T01:intron | 20.0% |
| !!! | TTTTATTGAAATTTCAGAAG+TGG | + | Chr4:49581388-49581407 | MsG0480020847.01.T01:intron | 20.0% |
| ! | AAAATCTTCTCAACCAAAAA+AGG | - | Chr4:49582030-49582049 | None:intergenic | 25.0% |
| ! | AAGGTTGTGGATTTAAAAAA+AGG | - | Chr4:49580696-49580715 | None:intergenic | 25.0% |
| ! | ACAACAAGGTATAAATTGAT+TGG | + | Chr4:49581306-49581325 | MsG0480020847.01.T01:intron | 25.0% |
| ! | ATCTAACATTTACAACAGAA+TGG | + | Chr4:49581206-49581225 | MsG0480020847.01.T01:intron | 25.0% |
| ! | ATCTCTTCTTCAATATGATT+AGG | - | Chr4:49582865-49582884 | None:intergenic | 25.0% |
| ! | GAAAGTGAAATATTGAGAAA+TGG | + | Chr4:49582832-49582851 | MsG0480020847.01.T01:CDS | 25.0% |
| ! | TATAATTGATGTTGCATTAG+AGG | + | Chr4:49582056-49582075 | MsG0480020847.01.T01:intron | 25.0% |
| ! | TATCCAACAGTCTATATTTA+AGG | - | Chr4:49581627-49581646 | None:intergenic | 25.0% |
| ! | TTGTTCTTGATATTTAGTCT+CGG | - | Chr4:49582938-49582957 | None:intergenic | 25.0% |
| !! | TCAGTACATTTTTCCTTTTT+TGG | + | Chr4:49582014-49582033 | MsG0480020847.01.T01:intron | 25.0% |
| !! | TGTCATTGATTAGTTCTTTA+TGG | - | Chr4:49580906-49580925 | None:intergenic | 25.0% |
| !! | TGTTGACTGAATAAAACAAA+AGG | - | Chr4:49581121-49581140 | None:intergenic | 25.0% |
| !!! | ACTGTTTGTTATGTTTTAGT+TGG | + | Chr4:49583870-49583889 | MsG0480020847.01.T01:three_prime_UTR | 25.0% |
| !!! | TTAAGTTGATTATCCAAACA+AGG | + | Chr4:49581904-49581923 | MsG0480020847.01.T01:intron | 25.0% |
| AAATGAACATGGACTTCAAA+AGG | + | Chr4:49583182-49583201 | MsG0480020847.01.T01:CDS | 30.0% | |
| AACTGATATTGAAGAGTTGA+AGG | + | Chr4:49583068-49583087 | MsG0480020847.01.T01:CDS | 30.0% | |
| ACTTCAAGATGATTTGAAGA+AGG | + | Chr4:49582123-49582142 | MsG0480020847.01.T01:CDS | 30.0% | |
| AGTTACCATTTATGTGTGAA+AGG | + | Chr4:49581257-49581276 | MsG0480020847.01.T01:intron | 30.0% | |
| ATGTCATCACAAAATGAACA+TGG | + | Chr4:49583171-49583190 | MsG0480020847.01.T01:CDS | 30.0% | |
| ATTTAGGCAAGGTGATAAAA+GGG | - | Chr4:49580979-49580998 | None:intergenic | 30.0% | |
| GATTTCCAGAGAAAGAAAAA+TGG | + | Chr4:49583666-49583685 | MsG0480020847.01.T01:CDS | 30.0% | |
| TCAAAAGGAACTCAAAAGAT+TGG | + | Chr4:49583197-49583216 | MsG0480020847.01.T01:CDS | 30.0% | |
| TCAACATCTTCAGCATAATT+AGG | - | Chr4:49583642-49583661 | None:intergenic | 30.0% | |
| TCATTCTGTTCAAAATCTTG+TGG | + | Chr4:49582789-49582808 | MsG0480020847.01.T01:CDS | 30.0% | |
| TGAAATATTGAGAAATGGAG+AGG | + | Chr4:49582837-49582856 | MsG0480020847.01.T01:CDS | 30.0% | |
| TGAATTGAAAGCTGATATGA+TGG | + | Chr4:49583233-49583252 | MsG0480020847.01.T01:CDS | 30.0% | |
| TGAGACATGATTATGCATTT+AGG | - | Chr4:49580995-49581014 | None:intergenic | 30.0% | |
| TGTCCTTAAATATAGACTGT+TGG | + | Chr4:49581621-49581640 | MsG0480020847.01.T01:intron | 30.0% | |
| TTGAAGATTACCTTGTCTTA+GGG | - | Chr4:49580566-49580585 | None:intergenic | 30.0% | |
| TTTGAAGATTACCTTGTCTT+AGG | - | Chr4:49580567-49580586 | None:intergenic | 30.0% | |
| ! | CAGAGGTAGTATTTTATTAC+TGG | - | Chr4:49581603-49581622 | None:intergenic | 30.0% |
| ! | CATTTTATCACAATGCATCA+AGG | + | Chr4:49580879-49580898 | MsG0480020847.01.T01:intron | 30.0% |
| ! | TCCAATTCAGATATTTTGCT+GGG | - | Chr4:49582088-49582107 | None:intergenic | 30.0% |
| ! | TTCCAATTCAGATATTTTGC+TGG | - | Chr4:49582089-49582108 | None:intergenic | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | + | Chr4:49581731-49581750 | MsG0480020847.01.T01:intron | 30.0% |
| !! | TGTTCTTTGAAATCTGAGAT+TGG | + | Chr4:49582886-49582905 | MsG0480020847.01.T01:CDS | 30.0% |
| !! | TGTTTCCATTTTTCTTTCTC+TGG | - | Chr4:49583674-49583693 | None:intergenic | 30.0% |
| !!! | ATTTCCTTTTTGGTTGAAGT+AGG | + | Chr4:49581029-49581048 | MsG0480020847.01.T01:intron | 30.0% |
| !!! | GAGTTGTTACCTCTTTTTTA+AGG | + | Chr4:49581093-49581112 | MsG0480020847.01.T01:intron | 30.0% |
| !!! | TCAATCAGTCACTATTTTTG+AGG | - | Chr4:49583729-49583748 | None:intergenic | 30.0% |
| AAATGGAAAGCGAACTAAGA+AGG | + | Chr4:49583487-49583506 | MsG0480020847.01.T01:CDS | 35.0% | |
| AGAGTTGAAGGCTAATCTAA+TGG | + | Chr4:49583080-49583099 | MsG0480020847.01.T01:CDS | 35.0% | |
| AGATGATTTGAAGAAGGTGA+AGG | + | Chr4:49582129-49582148 | MsG0480020847.01.T01:CDS | 35.0% | |
| ATCAGAATCACTTTCTCAGA+TGG | + | Chr4:49582519-49582538 | MsG0480020847.01.T01:CDS | 35.0% | |
| ATGATTCAGACGAAATAAGC+TGG | - | Chr4:49582156-49582175 | None:intergenic | 35.0% | |
| ATGTGGATATCTCTCTTAGT+CGG | - | Chr4:49580791-49580810 | None:intergenic | 35.0% | |
| CAGTCTATATTTAAGGACAG+AGG | - | Chr4:49581620-49581639 | None:intergenic | 35.0% | |
| CAGTTCCTTTCACACATAAA+TGG | - | Chr4:49581265-49581284 | None:intergenic | 35.0% | |
| CATGATTATGCATTTAGGCA+AGG | - | Chr4:49580990-49581009 | None:intergenic | 35.0% | |
| CATTTAGGCAAGGTGATAAA+AGG | - | Chr4:49580980-49580999 | None:intergenic | 35.0% | |
| GAAAATCAACAAGAGTTGCT+TGG | + | Chr4:49583308-49583327 | MsG0480020847.01.T01:CDS | 35.0% | |
| GATATCCACATTTAGTTGAG+AGG | + | Chr4:49580800-49580819 | MsG0480020847.01.T01:intron | 35.0% | |
| GGATGATTGTAAATTCGAGA+AGG | + | Chr4:49582810-49582829 | MsG0480020847.01.T01:CDS | 35.0% | |
| TCAAACTCAACAAGCTGAAT+CGG | + | Chr4:49582462-49582481 | MsG0480020847.01.T01:CDS | 35.0% | |
| TCATAGGTTTCTTCAACAAG+AGG | - | Chr4:49580841-49580860 | None:intergenic | 35.0% | |
| TCTTAGTTCGCTTTCCATTT+CGG | - | Chr4:49583487-49583506 | None:intergenic | 35.0% | |
| TGAAGATTACCTTGTCTTAG+GGG | - | Chr4:49580565-49580584 | None:intergenic | 35.0% | |
| TGTTAATCAATAGAGCGGAA+GGG | + | Chr4:49580727-49580746 | MsG0480020847.01.T01:intron | 35.0% | |
| TTAAGGTACAGTCTGATCAA+TGG | + | Chr4:49583511-49583530 | MsG0480020847.01.T01:CDS | 35.0% | |
| TTGTTAATCAATAGAGCGGA+AGG | + | Chr4:49580726-49580745 | MsG0480020847.01.T01:intron | 35.0% | |
| TTTATGTGTGAAAGGAACTG+AGG | + | Chr4:49581265-49581284 | MsG0480020847.01.T01:intron | 35.0% | |
| ! | AAGTTATGCATTGCCTTGTT+TGG | - | Chr4:49581920-49581939 | None:intergenic | 35.0% |
| ! | CCAATTCAGATATTTTGCTG+GGG | - | Chr4:49582087-49582106 | None:intergenic | 35.0% |
| ! | GTTGATGGAGCAGATAAAAT+CGG | + | Chr4:49582996-49583015 | MsG0480020847.01.T01:CDS | 35.0% |
| ! | TCCGCTCTATTGATTAACAA+GGG | - | Chr4:49580726-49580745 | None:intergenic | 35.0% |
| ! | TGAAGAAGTTTGGAGTCTTA+TGG | + | Chr4:49583697-49583716 | MsG0480020847.01.T01:CDS | 35.0% |
| ! | TTCCGCTCTATTGATTAACA+AGG | - | Chr4:49580727-49580746 | None:intergenic | 35.0% |
| !! | CAAAAGGTGCCTTAAAAAAG+AGG | - | Chr4:49581105-49581124 | None:intergenic | 35.0% |
| !! | CTTTGAAATCTGAGATTGGA+CGG | + | Chr4:49582890-49582909 | MsG0480020847.01.T01:CDS | 35.0% |
| !! | GTTCTTTGCTATTCTTGAGT+TGG | - | Chr4:49582558-49582577 | None:intergenic | 35.0% |
| !! | TGGTAAAAACTTGTTACCTC+AGG | - | Chr4:49581583-49581602 | None:intergenic | 35.0% |
| AAAAGAGGTAACAACTCCCT+TGG | - | Chr4:49581090-49581109 | None:intergenic | 40.0% | |
| AAAGAACCGTCGAGATTCTA+AGG | + | Chr4:49582635-49582654 | MsG0480020847.01.T01:CDS | 40.0% | |
| AAAGAGGTAACAACTCCCTT+GGG | - | Chr4:49581089-49581108 | None:intergenic | 40.0% | |
| AAGAACCGTCGAGATTCTAA+GGG | + | Chr4:49582636-49582655 | MsG0480020847.01.T01:CDS | 40.0% | |
| AAGATTTGTGCCTGAGTTTC+AGG | - | Chr4:49582580-49582599 | None:intergenic | 40.0% | |
| AAGCGAACTAAGAAGGCTTA+AGG | + | Chr4:49583494-49583513 | MsG0480020847.01.T01:CDS | 40.0% | |
| AAGCTATCTTGGAGAGCTTA+TGG | + | Chr4:49581742-49581761 | MsG0480020847.01.T01:intron | 40.0% | |
| ATCTCCCATTCCTCAGTTAA+AGG | - | Chr4:49581061-49581080 | None:intergenic | 40.0% | |
| ATGTTCCAACTCCAAAGCAA+TGG | - | Chr4:49582695-49582714 | None:intergenic | 40.0% | |
| CCCCAGCAAAATATCTGAAT+TGG | + | Chr4:49582084-49582103 | MsG0480020847.01.T01:CDS | 40.0% | |
| CCCCTTGTTAATCAATAGAG+CGG | + | Chr4:49580722-49580741 | MsG0480020847.01.T01:intron | 40.0% | |
| CTTTAGCATCTCGTTCTCTT+CGG | - | Chr4:49583286-49583305 | None:intergenic | 40.0% | |
| GAGCAGATAAAATCGGAATC+AGG | + | Chr4:49583003-49583022 | MsG0480020847.01.T01:CDS | 40.0% | |
| GATTAACAAGGGGAGTCATA+AGG | - | Chr4:49580715-49580734 | None:intergenic | 40.0% | |
| GGAAACATGCTGAAGAAGTT+TGG | + | Chr4:49583687-49583706 | MsG0480020847.01.T01:CDS | 40.0% | |
| GGAACCTACTTCAACCAAAA+AGG | - | Chr4:49581036-49581055 | None:intergenic | 40.0% | |
| GTTAATCAATAGAGCGGAAG+GGG | + | Chr4:49580728-49580747 | MsG0480020847.01.T01:intron | 40.0% | |
| TAACTGAGGAATGGGAGATT+GGG | + | Chr4:49581062-49581081 | MsG0480020847.01.T01:intron | 40.0% | |
| TACTGAGAGATCTGTGTCTT+TGG | + | Chr4:49583590-49583609 | MsG0480020847.01.T01:CDS | 40.0% | |
| TAGCAAAGAACCTGAAACTC+AGG | + | Chr4:49582567-49582586 | MsG0480020847.01.T01:CDS | 40.0% | |
| TCTCCCATTCCTCAGTTAAA+GGG | - | Chr4:49581060-49581079 | None:intergenic | 40.0% | |
| TGCTTTGTCTTCTGCATTGA+AGG | + | Chr4:49582387-49582406 | MsG0480020847.01.T01:CDS | 40.0% | |
| TGTGGATATCTCTCTTAGTC+GGG | - | Chr4:49580790-49580809 | None:intergenic | 40.0% | |
| TTAACTGAGGAATGGGAGAT+TGG | + | Chr4:49581061-49581080 | MsG0480020847.01.T01:intron | 40.0% | |
| TTCCATGATACCTTGCAACT+CGG | - | Chr4:49583115-49583134 | None:intergenic | 40.0% | |
| ! | CACGTTCTTCTGTGATTTTC+TGG | - | Chr4:49582309-49582328 | None:intergenic | 40.0% |
| ! | CCGCTCTATTGATTAACAAG+GGG | - | Chr4:49580725-49580744 | None:intergenic | 40.0% |
| ! | CTTGAATTGGTAGCTACTTG+TGG | + | Chr4:49582433-49582452 | MsG0480020847.01.T01:CDS | 40.0% |
| ! | GAAGGCTAATCTAATGGACA+AGG | + | Chr4:49583086-49583105 | MsG0480020847.01.T01:CDS | 40.0% |
| ! | GCTGAAAGCACAACTTGAAT+TGG | + | Chr4:49582420-49582439 | MsG0480020847.01.T01:CDS | 40.0% |
| ! | TATCTAGAGCTATGTGCTAC+TGG | + | Chr4:49582262-49582281 | MsG0480020847.01.T01:CDS | 40.0% |
| !! | AAACTTGTTACCTCAGGAAC+TGG | - | Chr4:49581577-49581596 | None:intergenic | 40.0% |
| !! | AACTTGTTACCTCAGGAACT+GGG | - | Chr4:49581576-49581595 | None:intergenic | 40.0% |
| !! | ACTCTTCGAGTTTTGCAGAT+AGG | - | Chr4:49582231-49582250 | None:intergenic | 40.0% |
| !! | AGTTGGAACATTCTAGAGCA+AGG | + | Chr4:49582704-49582723 | MsG0480020847.01.T01:CDS | 40.0% |
| !! | CTCTTCGAGTTTTGCAGATA+GGG | - | Chr4:49582230-49582249 | None:intergenic | 40.0% |
| !! | GTTGGAACATTCTAGAGCAA+GGG | + | Chr4:49582705-49582724 | MsG0480020847.01.T01:CDS | 40.0% |
| ACAGTCTGATCAATGGAGGA+AGG | + | Chr4:49583518-49583537 | MsG0480020847.01.T01:CDS | 45.0% | |
| AGACAGAAGCAACCGTAAAG+TGG | + | Chr4:49583419-49583438 | MsG0480020847.01.T01:CDS | 45.0% | |
| AGAGGAAATAGAGAAAGCCG+AGG | + | Chr4:49583347-49583366 | MsG0480020847.01.T01:CDS | 45.0% | |
| AGGCACCTCTCAACTAAATG+TGG | - | Chr4:49580808-49580827 | None:intergenic | 45.0% | |
| AGGTACAGTCTGATCAATGG+AGG | + | Chr4:49583514-49583533 | MsG0480020847.01.T01:CDS | 45.0% | |
| AGTCAACTGAGAGATGCTGT+TGG | - | Chr4:49582363-49582382 | None:intergenic | 45.0% | |
| ATGATTTCGGCAGGGAACAA+TGG | + | Chr4:49583561-49583580 | MsG0480020847.01.T01:CDS | 45.0% | |
| CAACAAGAGGTCATCGTATC+AGG | - | Chr4:49580828-49580847 | None:intergenic | 45.0% | |
| CCTCCCTTTAACTGAGGAAT+GGG | + | Chr4:49581054-49581073 | MsG0480020847.01.T01:intron | 45.0% | |
| GAGTAGTCGTAGTTCTCAGT+TGG | - | Chr4:49581459-49581478 | None:intergenic | 45.0% | |
| GGATGACAGTAAAGTGAGAG+AGG | + | Chr4:49583329-49583348 | MsG0480020847.01.T01:CDS | 45.0% | |
| GTCAACTGAGAGATGCTGTT+GGG | - | Chr4:49582362-49582381 | None:intergenic | 45.0% | |
| GTCATCCCTTAGAATCTCGA+CGG | - | Chr4:49582644-49582663 | None:intergenic | 45.0% | |
| TACGAAACTCGGGATTGTGA+TGG | + | Chr4:49583389-49583408 | MsG0480020847.01.T01:CDS | 45.0% | |
| TAGGTTCCTCCCTTTAACTG+AGG | + | Chr4:49581048-49581067 | MsG0480020847.01.T01:intron | 45.0% | |
| TCCTCCCTTTAACTGAGGAA+TGG | + | Chr4:49581053-49581072 | MsG0480020847.01.T01:intron | 45.0% | |
| TGATTTCGGCAGGGAACAAT+GGG | + | Chr4:49583562-49583581 | MsG0480020847.01.T01:CDS | 45.0% | |
| ! | AACCGAGTTGCAAGGTATCA+TGG | + | Chr4:49583110-49583129 | MsG0480020847.01.T01:CDS | 45.0% |
| ! | CAGAAGTGGTTCTTCTGAAG+TGG | + | Chr4:49581402-49581421 | MsG0480020847.01.T01:intron | 45.0% |
| !! | CAACTCCATTGCTTTGGAGT+TGG | + | Chr4:49582687-49582706 | MsG0480020847.01.T01:CDS | 45.0% |
| !! | TTGTGCTGCTTCTAACTGCT+CGG | - | Chr4:49583454-49583473 | None:intergenic | 45.0% |
| !! | TATAATTAAAGATAAATTAA+AGG | + | Chr4:49581683-49581702 | MsG0480020847.01.T01:intron | 5.0% |
| !! | TTTATCTTTAATTATAAAAA+TGG | - | Chr4:49581679-49581698 | None:intergenic | 5.0% |
| AAGCAACCGTAAAGTGGCGA+GGG | + | Chr4:49583425-49583444 | MsG0480020847.01.T01:CDS | 50.0% | |
| AATGGGAGATTGGGACCCAA+GGG | + | Chr4:49581071-49581090 | MsG0480020847.01.T01:intron | 50.0% | |
| ACAAGTGGCAAGCTCCGAAA+TGG | + | Chr4:49583470-49583489 | MsG0480020847.01.T01:CDS | 50.0% | |
| AGGCCAGAGACAATGTGAGT+TGG | + | Chr4:49583023-49583042 | MsG0480020847.01.T01:CDS | 50.0% | |
| CAAGGGGAGTCATAAGGTTG+TGG | - | Chr4:49580709-49580728 | None:intergenic | 50.0% | |
| CCCATTCCTCAGTTAAAGGG+AGG | - | Chr4:49581057-49581076 | None:intergenic | 50.0% | |
| CCTCCAACTCACATTGTCTC+TGG | - | Chr4:49583029-49583048 | None:intergenic | 50.0% | |
| CTGCTGCTATGATTTCGGCA+GGG | + | Chr4:49583553-49583572 | MsG0480020847.01.T01:CDS | 50.0% | |
| GAAACTCGGGATTGTGATGG+AGG | + | Chr4:49583392-49583411 | MsG0480020847.01.T01:CDS | 50.0% | |
| GACAAGGAAACCGAGTTGCA+AGG | + | Chr4:49583102-49583121 | MsG0480020847.01.T01:CDS | 50.0% | |
| GCAAGACTTCGAGGAATCCA+AGG | + | Chr4:49582192-49582211 | MsG0480020847.01.T01:CDS | 50.0% | |
| GCACGCGGAGAAACTTTCTT+AGG | - | Chr4:49581430-49581449 | None:intergenic | 50.0% | |
| GCAGTTAGAAGCAGCACAAG+TGG | + | Chr4:49583455-49583474 | MsG0480020847.01.T01:CDS | 50.0% | |
| GGCAGCTGCTGCTATGATTT+CGG | + | Chr4:49583548-49583567 | MsG0480020847.01.T01:CDS | 50.0% | |
| TAGGGCTAAGAGTTGCTCCT+TGG | - | Chr4:49582212-49582231 | None:intergenic | 50.0% | |
| TGGCTGCAACTCCATTGCTT+TGG | + | Chr4:49582681-49582700 | MsG0480020847.01.T01:CDS | 50.0% | |
| ! | ACGTGATAGCGCATGGAAGT+CGG | + | Chr4:49582324-49582343 | MsG0480020847.01.T01:CDS | 50.0% |
| ! | CAGAAGAACGTGATAGCGCA+TGG | + | Chr4:49582317-49582336 | MsG0480020847.01.T01:CDS | 50.0% |
| ! | CAGCAATGCGTACGAGTTGA+TGG | + | Chr4:49582981-49583000 | MsG0480020847.01.T01:CDS | 50.0% |
| ! | CCAGAGACAATGTGAGTTGG+AGG | + | Chr4:49583026-49583045 | MsG0480020847.01.T01:CDS | 50.0% |
| ! | TGACTTGCGATCAGCGAGTT+TGG | - | Chr4:49581545-49581564 | None:intergenic | 50.0% |
| ACCTCAGGAACTGGGCTTCT+GGG | - | Chr4:49581568-49581587 | None:intergenic | 55.0% | |
| GAAGCAACCGTAAAGTGGCG+AGG | + | Chr4:49583424-49583443 | MsG0480020847.01.T01:CDS | 55.0% | |
| GAATGGGAGATTGGGACCCA+AGG | + | Chr4:49581070-49581089 | MsG0480020847.01.T01:intron | 55.0% | |
| GACGTTGCGAGAGACGTAGA+TGG | + | Chr4:49582661-49582680 | MsG0480020847.01.T01:CDS | 55.0% | |
| GCAAGCTCAGCAAGACTTCG+AGG | + | Chr4:49582183-49582202 | MsG0480020847.01.T01:CDS | 55.0% | |
| GCTGCTGCTATGATTTCGGC+AGG | + | Chr4:49583552-49583571 | MsG0480020847.01.T01:CDS | 55.0% | |
| TACCTCAGGAACTGGGCTTC+TGG | - | Chr4:49581569-49581588 | None:intergenic | 55.0% | |
| TCAATGGAGGAAGGCTGCAG+AGG | + | Chr4:49583527-49583546 | MsG0480020847.01.T01:CDS | 55.0% | |
| ACCCAGAAGCCCAGTTCCTG+AGG | + | Chr4:49581564-49581583 | MsG0480020847.01.T01:CDS | 60.0% | |
| CGCGAGGCGGTTACGAAACT+CGG | + | Chr4:49583378-49583397 | MsG0480020847.01.T01:CDS | 60.0% | |
| CTCAGTTGGCGTACAGCACG+CGG | - | Chr4:49581445-49581464 | None:intergenic | 60.0% | |
| GCGAGGCGGTTACGAAACTC+GGG | + | Chr4:49583379-49583398 | MsG0480020847.01.T01:CDS | 60.0% | |
| ! | CGGTCACCCTCGCCACTTTA+CGG | - | Chr4:49583434-49583453 | None:intergenic | 60.0% |
| AGCCGAGGCTGCAAAACGCG+AGG | + | Chr4:49583362-49583381 | MsG0480020847.01.T01:CDS | 65.0% | |
| CGAGGCTGCAAAACGCGAGG+CGG | + | Chr4:49583365-49583384 | MsG0480020847.01.T01:CDS | 65.0% | |
| ! | CGCCTCGCGTTTTGCAGCCT+CGG | - | Chr4:49583367-49583386 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 49580555 | 49583913 | 49580555 | ID=MsG0480020847.01;Name=MsG0480020847.01 |
| Chr4 | mRNA | 49580555 | 49583913 | 49580555 | ID=MsG0480020847.01.T01;Parent=MsG0480020847.01;Name=MsG0480020847.01.T01;_AED=0.38;_eAED=0.38;_QI=0|1|1|1|0.33|0.5|4|176|620 |
| Chr4 | exon | 49580555 | 49580574 | 49580555 | ID=MsG0480020847.01.T01:exon:134;Parent=MsG0480020847.01.T01 |
| Chr4 | exon | 49581405 | 49581585 | 49581405 | ID=MsG0480020847.01.T01:exon:135;Parent=MsG0480020847.01.T01 |
| Chr4 | exon | 49582076 | 49583913 | 49582076 | ID=MsG0480020847.01.T01:exon:136;Parent=MsG0480020847.01.T01 |
| Chr4 | CDS | 49580555 | 49580574 | 49580555 | ID=MsG0480020847.01.T01:cds;Parent=MsG0480020847.01.T01 |
| Chr4 | CDS | 49581405 | 49581585 | 49581405 | ID=MsG0480020847.01.T01:cds;Parent=MsG0480020847.01.T01 |
| Chr4 | CDS | 49582076 | 49583737 | 49582076 | ID=MsG0480020847.01.T01:cds;Parent=MsG0480020847.01.T01 |
| Chr4 | three_prime_UTR | 49583738 | 49583913 | 49583738 | ID=MsG0480020847.01.T01:three_prime_utr;Parent=MsG0480020847.01.T01 |
| Gene Sequence |
| Protein sequence |
