Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041735.01.T01 | XP_003626548.1 | 94.433 | 485 | 16 | 3 | 1 | 485 | 1 | 474 | 0 | 936 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041735.01.T01 | P38557 | 91.079 | 482 | 32 | 3 | 1 | 482 | 1 | 471 | 0 | 905 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041735.01.T01 | G7L416 | 94.433 | 485 | 16 | 3 | 1 | 485 | 1 | 474 | 0.0 | 936 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047974.01 | MsG0780041735.01 | 0.802880 | 4.547091e-49 | 2.252632e-46 |
MsG0080048996.01 | MsG0780041735.01 | 0.887354 | 1.535512e-72 | 1.138083e-68 |
MsG0080049140.01 | MsG0780041735.01 | 0.805215 | 1.486320e-49 | 7.818493e-47 |
MsG0180000275.01 | MsG0780041735.01 | 0.820776 | 5.734957e-53 | 4.580492e-50 |
MsG0180000314.01 | MsG0780041735.01 | 0.815263 | 1.011285e-51 | 6.938649e-49 |
MsG0180000348.01 | MsG0780041735.01 | 0.801810 | 7.553344e-49 | 3.641353e-46 |
MsG0180002486.01 | MsG0780041735.01 | 0.832033 | 1.190354e-55 | 1.314733e-52 |
MsG0180003427.01 | MsG0780041735.01 | 0.801851 | 7.409689e-49 | 3.575797e-46 |
MsG0180003656.01 | MsG0780041735.01 | 0.816366 | 5.737842e-52 | 4.057918e-49 |
MsG0180003786.01 | MsG0780041735.01 | 0.811551 | 6.615748e-51 | 4.107450e-48 |
MsG0180003920.01 | MsG0780041735.01 | 0.821892 | 3.171321e-53 | 2.613395e-50 |
MsG0180004049.01 | MsG0780041735.01 | 0.804382 | 2.218559e-49 | 1.142275e-46 |
MsG0180004099.01 | MsG0780041735.01 | 0.803566 | 3.280101e-49 | 1.653850e-46 |
MsG0180004375.01 | MsG0780041735.01 | 0.823282 | 1.506703e-53 | 1.291585e-50 |
MsG0180004711.01 | MsG0780041735.01 | 0.806763 | 7.023814e-50 | 3.844182e-47 |
MsG0180005529.01 | MsG0780041735.01 | 0.822119 | 2.809547e-53 | 2.330161e-50 |
MsG0180005530.01 | MsG0780041735.01 | 0.819540 | 1.100722e-52 | 8.494744e-50 |
MsG0180005746.01 | MsG0780041735.01 | 0.820036 | 8.480431e-53 | 6.636076e-50 |
MsG0180005919.01 | MsG0780041735.01 | 0.828013 | 1.138422e-54 | 1.117693e-51 |
MsG0180006000.01 | MsG0780041735.01 | 0.875817 | 2.285363e-68 | 1.082519e-64 |
MsG0280006311.01 | MsG0780041735.01 | 0.812093 | 5.042026e-51 | 3.176059e-48 |
MsG0780040307.01 | MsG0780041735.01 | 0.800551 | 1.366861e-48 | 6.382620e-46 |
MsG0780040365.01 | MsG0780041735.01 | 0.836805 | 7.542732e-57 | 9.611036e-54 |
MsG0780040472.01 | MsG0780041735.01 | 0.869124 | 3.916854e-66 | 1.453168e-62 |
MsG0780040509.01 | MsG0780041735.01 | 0.860430 | 2.076487e-63 | 5.674737e-60 |
MsG0780040529.01 | MsG0780041735.01 | 0.827486 | 1.523394e-54 | 1.472802e-51 |
MsG0780040765.01 | MsG0780041735.01 | 0.830119 | 3.513622e-55 | 3.667871e-52 |
MsG0780040828.01 | MsG0780041735.01 | 0.807819 | 4.195299e-50 | 2.359983e-47 |
MsG0780040926.01 | MsG0780041735.01 | 0.802517 | 5.403407e-49 | 2.652093e-46 |
MsG0780041063.01 | MsG0780041735.01 | 0.862876 | 3.715241e-64 | 1.104871e-60 |
MsG0780041735.01 | MsG0880042380.01 | 0.809492 | 1.842651e-50 | 1.083398e-47 |
MsG0780041735.01 | MsG0880042544.01 | 0.822755 | 1.998999e-53 | 1.688457e-50 |
MsG0780041735.01 | MsG0880042773.01 | 0.874043 | 9.193379e-68 | 4.077740e-64 |
MsG0780041735.01 | MsG0880042779.01 | 0.804195 | 2.427177e-49 | 1.243636e-46 |
MsG0780041735.01 | MsG0880042791.01 | 0.822966 | 1.785143e-53 | 1.516761e-50 |
MsG0780041735.01 | MsG0880042813.01 | 0.808208 | 3.466853e-50 | 1.970416e-47 |
MsG0780041735.01 | MsG0880043614.01 | 0.870541 | 1.349618e-66 | 5.269852e-63 |
MsG0780041735.01 | MsG0880043637.01 | 0.858808 | 6.387209e-63 | 1.650663e-59 |
MsG0780041735.01 | MsG0880043944.01 | 0.800051 | 1.727928e-48 | 7.966927e-46 |
MsG0780041735.01 | MsG0880044555.01 | 0.820669 | 6.069503e-53 | 4.833003e-50 |
MsG0780041735.01 | MsG0880044782.01 | 0.832165 | 1.104313e-55 | 1.224290e-52 |
MsG0780041735.01 | MsG0880045294.01 | 0.802091 | 6.612723e-49 | 3.210747e-46 |
MsG0780041735.01 | MsG0880045483.01 | 0.839238 | 1.786236e-57 | 2.451642e-54 |
MsG0780041735.01 | MsG0880045915.01 | 0.808274 | 3.356170e-50 | 1.910867e-47 |
MsG0780041735.01 | MsG0880046834.01 | 0.809574 | 1.769551e-50 | 1.042742e-47 |
MsG0780041735.01 | MsG0880046922.01 | 0.800118 | 1.674276e-48 | 7.732742e-46 |
MsG0780041735.01 | MsG0880047226.01 | 0.800787 | 1.223152e-48 | 5.745800e-46 |
MsG0280010977.01 | MsG0780041735.01 | 0.858219 | 9.570340e-63 | 2.424567e-59 |
MsG0280011416.01 | MsG0780041735.01 | 0.859616 | 3.657818e-63 | 9.718702e-60 |
MsG0380014668.01 | MsG0780041735.01 | 0.812325 | 4.487880e-51 | 2.844876e-48 |
MsG0380014808.01 | MsG0780041735.01 | 0.834558 | 2.796166e-56 | 3.330478e-53 |
MsG0680030865.01 | MsG0780041735.01 | 0.803594 | 3.235390e-49 | 1.632471e-46 |
MsG0680032935.01 | MsG0780041735.01 | 0.800516 | 1.389459e-48 | 6.482537e-46 |
MsG0680034853.01 | MsG0780041735.01 | 0.813088 | 3.055459e-51 | 1.976292e-48 |
MsG0480019710.01 | MsG0780041735.01 | 0.810070 | 1.383513e-50 | 8.259706e-48 |
MsG0480019922.01 | MsG0780041735.01 | 0.807351 | 5.274601e-50 | 2.931212e-47 |
MsG0480020402.01 | MsG0780041735.01 | 0.840601 | 7.882440e-58 | 1.128428e-54 |
MsG0480020699.01 | MsG0780041735.01 | 0.839755 | 1.311004e-57 | 1.828027e-54 |
MsG0480020847.01 | MsG0780041735.01 | 0.855186 | 7.469554e-62 | 1.709894e-58 |
MsG0480020909.01 | MsG0780041735.01 | 0.825713 | 4.033316e-54 | 3.705285e-51 |
MsG0480020965.01 | MsG0780041735.01 | 0.820385 | 7.052546e-53 | 5.572559e-50 |
MsG0480021013.01 | MsG0780041735.01 | 0.834476 | 2.932212e-56 | 3.483847e-53 |
MsG0480021322.01 | MsG0780041735.01 | 0.817116 | 3.896683e-52 | 2.812767e-49 |
MsG0480021719.01 | MsG0780041735.01 | 0.812091 | 5.046810e-51 | 3.178903e-48 |
MsG0480021984.01 | MsG0780041735.01 | 0.813946 | 1.978139e-51 | 1.309688e-48 |
MsG0480022045.01 | MsG0780041735.01 | 0.803086 | 4.123107e-49 | 2.053195e-46 |
MsG0480022313.01 | MsG0780041735.01 | 0.842657 | 2.262032e-58 | 3.452949e-55 |
MsG0480022325.01 | MsG0780041735.01 | 0.810533 | 1.099691e-50 | 6.645321e-48 |
MsG0480022549.01 | MsG0780041735.01 | 0.844055 | 9.579096e-59 | 1.528210e-55 |
MsG0480022755.01 | MsG0780041735.01 | 0.826406 | 2.760575e-54 | 2.586695e-51 |
MsG0480022796.01 | MsG0780041735.01 | 0.848891 | 4.591427e-60 | 8.550856e-57 |
MsG0480022952.01 | MsG0780041735.01 | 0.813010 | 3.177874e-51 | 2.051302e-48 |
MsG0480022998.01 | MsG0780041735.01 | 0.839912 | 1.193042e-57 | 1.671923e-54 |
MsG0480023146.01 | MsG0780041735.01 | 0.848250 | 6.907661e-60 | 1.259908e-56 |
MsG0480023262.01 | MsG0780041735.01 | 0.822581 | 2.194301e-53 | 1.844299e-50 |
MsG0480023296.01 | MsG0780041735.01 | 0.809408 | 1.920584e-50 | 1.126775e-47 |
MsG0480023463.01 | MsG0780041735.01 | 0.812546 | 4.015575e-51 | 2.560566e-48 |
MsG0480023620.01 | MsG0780041735.01 | 0.811352 | 7.306689e-51 | 4.512434e-48 |
MsG0480023671.01 | MsG0780041735.01 | 0.800413 | 1.458135e-48 | 6.785378e-46 |
MsG0480023762.01 | MsG0780041735.01 | 0.839946 | 1.168857e-57 | 1.639807e-54 |
MsG0580024317.01 | MsG0780041735.01 | 0.841511 | 4.544677e-58 | 6.693305e-55 |
MsG0580024358.01 | MsG0780041735.01 | 0.823164 | 1.604701e-53 | 1.371072e-50 |
MsG0580024489.01 | MsG0780041735.01 | 0.823041 | 1.714263e-53 | 1.459732e-50 |
MsG0580024722.01 | MsG0780041735.01 | 0.821101 | 4.829550e-53 | 3.892587e-50 |
MsG0580024758.01 | MsG0780041735.01 | 0.817131 | 3.865806e-52 | 2.791703e-49 |
MsG0580025645.01 | MsG0780041735.01 | 0.850689 | 1.443440e-60 | 2.850600e-57 |
MsG0580026059.01 | MsG0780041735.01 | 0.813432 | 2.566719e-51 | 1.675954e-48 |
MsG0380015350.01 | MsG0780041735.01 | 0.841452 | 4.712270e-58 | 6.927556e-55 |
MsG0380015363.01 | MsG0780041735.01 | 0.824349 | 8.467974e-54 | 7.481113e-51 |
MsG0380015548.01 | MsG0780041735.01 | 0.821662 | 3.584406e-53 | 2.934473e-50 |
MsG0380016140.01 | MsG0780041735.01 | 0.858687 | 6.944267e-63 | 1.787199e-59 |
MsG0380016247.01 | MsG0780041735.01 | 0.819320 | 1.235708e-52 | 9.477083e-50 |
MsG0380016703.01 | MsG0780041735.01 | 0.854020 | 1.624769e-61 | 3.579524e-58 |
MsG0380016893.01 | MsG0780041735.01 | 0.814894 | 1.221249e-51 | 8.295402e-49 |
MsG0380016920.01 | MsG0780041735.01 | 0.872250 | 3.674542e-67 | 1.526984e-63 |
MsG0380016994.01 | MsG0780041735.01 | 0.800535 | 1.376883e-48 | 6.426886e-46 |
MsG0380017061.01 | MsG0780041735.01 | 0.832584 | 8.694937e-56 | 9.761292e-53 |
MsG0380017159.01 | MsG0780041735.01 | 0.860168 | 2.492008e-63 | 6.750055e-60 |
MsG0380017559.01 | MsG0780041735.01 | 0.824174 | 9.312547e-54 | 8.186873e-51 |
MsG0480018397.01 | MsG0780041735.01 | 0.840787 | 7.046833e-58 | 1.014689e-54 |
MsG0580026145.01 | MsG0780041735.01 | 0.870741 | 1.160714e-66 | 4.564354e-63 |
MsG0580027618.01 | MsG0780041735.01 | 0.804444 | 2.153819e-49 | 1.110659e-46 |
MsG0580028060.01 | MsG0780041735.01 | 0.821210 | 4.558269e-53 | 3.685117e-50 |
MsG0580028756.01 | MsG0780041735.01 | 0.801922 | 7.162185e-49 | 3.462561e-46 |
MsG0580028923.01 | MsG0780041735.01 | 0.800464 | 1.423986e-48 | 6.634564e-46 |
MsG0580030062.01 | MsG0780041735.01 | 0.802826 | 4.665935e-49 | 2.308517e-46 |
MsG0680030400.01 | MsG0780041735.01 | 0.807865 | 4.101937e-50 | 2.310186e-47 |
MsG0280007067.01 | MsG0780041735.01 | 0.804695 | 1.908958e-49 | 9.908413e-47 |
MsG0280007359.01 | MsG0780041735.01 | 0.809248 | 2.078408e-50 | 1.214160e-47 |
MsG0280007452.01 | MsG0780041735.01 | 0.807615 | 4.634876e-50 | 2.593364e-47 |
MsG0280009783.01 | MsG0780041735.01 | 0.836766 | 7.717698e-57 | 9.822896e-54 |
MsG0280009794.01 | MsG0780041735.01 | 0.847489 | 1.119714e-59 | 1.993517e-56 |
MsG0280010015.01 | MsG0780041735.01 | 0.849324 | 3.479636e-60 | 6.572859e-57 |
MsG0680035878.01 | MsG0780041735.01 | 0.801753 | 7.757840e-49 | 3.734387e-46 |
MsG0780035954.01 | MsG0780041735.01 | 0.837122 | 6.260863e-57 | 8.053972e-54 |
MsG0780036752.01 | MsG0780041735.01 | 0.840913 | 6.527726e-58 | 9.436693e-55 |
MsG0780036815.01 | MsG0780041735.01 | 0.814956 | 1.182862e-51 | 8.048437e-49 |
MsG0780036816.01 | MsG0780041735.01 | 0.832615 | 8.543047e-56 | 9.599429e-53 |
MsG0780036941.01 | MsG0780041735.01 | 0.814444 | 1.535903e-51 | 1.030753e-48 |
MsG0780038332.01 | MsG0780041735.01 | 0.876861 | 9.967437e-69 | 4.908751e-65 |
MsG0780038603.01 | MsG0780041735.01 | 0.822325 | 2.516499e-53 | 2.099571e-50 |
MsG0780038987.01 | MsG0780041735.01 | 0.838569 | 2.660324e-57 | 3.577484e-54 |
MsG0780039189.01 | MsG0780041735.01 | 0.857732 | 1.336017e-62 | 3.330073e-59 |
MsG0780039866.01 | MsG0780041735.01 | 0.806907 | 6.547756e-50 | 3.597014e-47 |
MsG0780040068.01 | MsG0780041735.01 | 0.847125 | 1.408859e-59 | 2.479436e-56 |
MsG0780040076.01 | MsG0780041735.01 | 0.801106 | 1.053074e-48 | 4.987422e-46 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0780041735.01 | MsG0280006563.01 | PPI |
MsG0780041735.01 | MsG0480018845.01 | PPI |
MsG0780041735.01 | MsG0780040365.01 | PPI |
MsG0780041735.01 | MsG0480022744.01 | PPI |
MsG0780041735.01 | MsG0480018846.01 | PPI |
MsG0780041735.01 | MsG0280010352.01 | PPI |
MsG0480022744.01 | MsG0780041735.01 | PPI |
MsG0780041735.01 | MsG0280007740.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041735.01.T01 | MTR_7g117050 | 94.433 | 485 | 16 | 3 | 1 | 485 | 1 | 474 | 0.0 | 936 |
MsG0780041735.01.T01 | MTR_4g017630 | 34.967 | 449 | 264 | 9 | 3 | 450 | 2 | 423 | 6.56e-83 | 263 |
MsG0780041735.01.T01 | MTR_4g019110 | 34.076 | 449 | 268 | 9 | 3 | 450 | 2 | 423 | 4.51e-81 | 259 |
MsG0780041735.01.T01 | MTR_1g101130 | 34.076 | 449 | 268 | 9 | 3 | 450 | 2 | 423 | 7.21e-81 | 258 |
MsG0780041735.01.T01 | MTR_4g019090 | 34.076 | 449 | 268 | 9 | 3 | 450 | 2 | 423 | 7.69e-81 | 258 |
MsG0780041735.01.T01 | MTR_2g031310 | 34.076 | 449 | 268 | 9 | 3 | 450 | 2 | 423 | 1.17e-80 | 258 |
MsG0780041735.01.T01 | MTR_8g098360 | 33.185 | 449 | 272 | 7 | 3 | 450 | 2 | 423 | 1.41e-80 | 257 |
MsG0780041735.01.T01 | MTR_3g113970 | 34.581 | 454 | 261 | 11 | 3 | 450 | 2 | 425 | 3.92e-80 | 256 |
MsG0780041735.01.T01 | MTR_4g094535 | 34.076 | 449 | 268 | 9 | 3 | 450 | 2 | 423 | 4.07e-80 | 256 |
MsG0780041735.01.T01 | MTR_7g089120 | 33.853 | 449 | 269 | 9 | 3 | 450 | 2 | 423 | 6.72e-79 | 253 |
MsG0780041735.01.T01 | MTR_8g107250 | 33.556 | 450 | 270 | 9 | 3 | 450 | 2 | 424 | 7.82e-78 | 250 |
MsG0780041735.01.T01 | MTR_7g085800 | 30.973 | 452 | 288 | 9 | 3 | 450 | 2 | 433 | 9.97e-66 | 219 |
MsG0780041735.01.T01 | MTR_4g097830 | 30.197 | 457 | 285 | 10 | 3 | 450 | 2 | 433 | 2.73e-63 | 213 |
MsG0780041735.01.T01 | MTR_8g085980 | 29.167 | 456 | 291 | 9 | 3 | 450 | 2 | 433 | 5.98e-63 | 211 |
MsG0780041735.01.T01 | MTR_3g110720 | 30.197 | 457 | 285 | 10 | 3 | 450 | 2 | 433 | 6.54e-63 | 211 |
MsG0780041735.01.T01 | MTR_1g106005 | 29.978 | 457 | 286 | 10 | 3 | 450 | 2 | 433 | 2.51e-62 | 210 |
MsG0780041735.01.T01 | MTR_6g029190 | 30.044 | 456 | 286 | 9 | 3 | 449 | 2 | 433 | 4.39e-62 | 209 |
MsG0780041735.01.T01 | MTR_2g041670 | 31.738 | 397 | 251 | 8 | 3 | 392 | 2 | 385 | 2.24e-50 | 179 |
MsG0780041735.01.T01 | MTR_2g041400 | 31.313 | 396 | 252 | 8 | 3 | 391 | 2 | 384 | 3.66e-49 | 174 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041735.01.T01 | AT3G61650 | 91.079 | 482 | 32 | 3 | 1 | 482 | 1 | 471 | 0.0 | 905 |
MsG0780041735.01.T01 | AT5G05620 | 90.041 | 482 | 37 | 3 | 1 | 482 | 1 | 471 | 0.0 | 897 |
MsG0780041735.01.T01 | AT5G44340 | 34.967 | 449 | 264 | 9 | 3 | 450 | 2 | 423 | 3.86e-83 | 264 |
MsG0780041735.01.T01 | AT4G20890 | 34.521 | 449 | 266 | 9 | 3 | 450 | 2 | 423 | 3.20e-82 | 262 |
MsG0780041735.01.T01 | AT5G23860 | 34.298 | 449 | 267 | 9 | 3 | 450 | 2 | 423 | 2.49e-81 | 259 |
MsG0780041735.01.T01 | AT5G23860 | 34.298 | 449 | 267 | 9 | 3 | 450 | 2 | 423 | 2.49e-81 | 259 |
MsG0780041735.01.T01 | AT2G29550 | 34.744 | 449 | 265 | 9 | 3 | 450 | 2 | 423 | 2.83e-81 | 259 |
MsG0780041735.01.T01 | AT1G75780 | 34.889 | 450 | 264 | 10 | 3 | 450 | 2 | 424 | 1.58e-80 | 257 |
MsG0780041735.01.T01 | AT5G62700 | 34.076 | 449 | 268 | 9 | 3 | 450 | 2 | 423 | 3.61e-80 | 256 |
MsG0780041735.01.T01 | AT5G62690 | 34.076 | 449 | 268 | 9 | 3 | 450 | 2 | 423 | 3.61e-80 | 256 |
MsG0780041735.01.T01 | AT1G20010 | 34.889 | 450 | 264 | 10 | 3 | 450 | 2 | 424 | 7.41e-80 | 256 |
MsG0780041735.01.T01 | AT5G12250 | 34.076 | 449 | 268 | 9 | 3 | 450 | 2 | 423 | 1.92e-79 | 254 |
MsG0780041735.01.T01 | AT1G64740 | 29.167 | 456 | 291 | 9 | 3 | 450 | 2 | 433 | 1.55e-63 | 213 |
MsG0780041735.01.T01 | AT5G19780 | 29.386 | 456 | 290 | 9 | 3 | 450 | 2 | 433 | 4.83e-63 | 212 |
MsG0780041735.01.T01 | AT5G19770 | 29.386 | 456 | 290 | 9 | 3 | 450 | 2 | 433 | 4.83e-63 | 212 |
MsG0780041735.01.T01 | AT4G14960 | 29.978 | 457 | 286 | 10 | 3 | 450 | 2 | 433 | 1.28e-62 | 211 |
MsG0780041735.01.T01 | AT1G04820 | 29.978 | 457 | 286 | 10 | 3 | 450 | 2 | 433 | 1.58e-62 | 210 |
MsG0780041735.01.T01 | AT1G50010 | 29.978 | 457 | 286 | 10 | 3 | 450 | 2 | 433 | 1.58e-62 | 210 |
MsG0780041735.01.T01 | AT4G14960 | 33.154 | 371 | 234 | 7 | 3 | 369 | 2 | 362 | 1.66e-59 | 202 |
Find 135 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCTTCATACTACTGATTT+TGG | 0.178192 | 7:+94553748 | None:intergenic |
TTGGAACCAAGGGTTATTAA+TGG | 0.245426 | 7:-94557617 | MsG0780041735.01.T01:CDS |
TTTAGCTTGGCTAGCATCTT+TGG | 0.260486 | 7:+94555211 | None:intergenic |
AAGAGACATTATTGAGAGTT+TGG | 0.287511 | 7:-94553952 | MsG0780041735.01.T01:CDS |
ATTCCCCATTTGATATAATC+TGG | 0.291812 | 7:+94553903 | None:intergenic |
TGCTGCATCTGTTCTGTACT+TGG | 0.297536 | 7:-94554066 | MsG0780041735.01.T01:CDS |
CCGTGCTTTATTGATTGATT+TGG | 0.301583 | 7:-94557636 | MsG0780041735.01.T01:CDS |
GTTCTATGTCATTCAATTGC+TGG | 0.305453 | 7:-94556372 | MsG0780041735.01.T01:CDS |
ACCAGATCGGTATGGAATTC+TGG | 0.309683 | 7:-94557864 | MsG0780041735.01.T01:CDS |
TATATCCTGTCATTAGAAAA+TGG | 0.320239 | 7:+94555613 | None:intergenic |
CAATATGGTTGGTTTGTTAT+TGG | 0.325071 | 7:-94553309 | MsG0780041735.01.T01:three_prime_UTR |
TGTATTGTTTGTTTATCATT+TGG | 0.325442 | 7:-94553361 | MsG0780041735.01.T01:three_prime_UTR |
GAGTTTGGTTGACGAATATA+AGG | 0.328007 | 7:-94553937 | MsG0780041735.01.T01:CDS |
TCACTTGTCTCCATTTGGTT+AGG | 0.344251 | 7:+94555894 | None:intergenic |
CCACATCACTTGTCTCCATT+TGG | 0.361567 | 7:+94555889 | None:intergenic |
GTGGGGTCCTGCTAGTATTC+AGG | 0.370913 | 7:-94554581 | MsG0780041735.01.T01:intron |
ACAGAATACCACTGTCAATA+TGG | 0.372776 | 7:-94553324 | MsG0780041735.01.T01:three_prime_UTR |
TCTCATGATTGTAAAGATTA+CGG | 0.376121 | 7:+94557576 | None:intergenic |
GTGGTGGTGCTGGTAACAAT+TGG | 0.384508 | 7:-94557532 | MsG0780041735.01.T01:CDS |
GGTCATTCAGAGTCTCTAAA+AGG | 0.387096 | 7:+94555955 | None:intergenic |
AATATTGTCATTACCTGAGT+TGG | 0.398405 | 7:+94555149 | None:intergenic |
AATCCCCAGATTATATCAAA+TGG | 0.399374 | 7:-94553908 | MsG0780041735.01.T01:CDS |
CTGTGTGCAGTTTGAACATA+TGG | 0.400407 | 7:+94554437 | None:intergenic |
AAGAAAAGCAGAGTGCAATT+TGG | 0.403095 | 7:-94558110 | MsG0780041735.01.T01:five_prime_UTR |
CACTAACAATAGAATAGAAA+TGG | 0.404089 | 7:+94557971 | None:intergenic |
GAATGTTGAAGAAGACATAA+TGG | 0.419103 | 7:-94556442 | MsG0780041735.01.T01:CDS |
TCTCCTGTCATCATATTATT+CGG | 0.421502 | 7:+94553796 | None:intergenic |
CTGGCAGGTGACGAGCAATA+AGG | 0.421976 | 7:-94553462 | MsG0780041735.01.T01:intron |
ACAGGAGAGGGCAGTGCTGC+AGG | 0.426001 | 7:-94553781 | MsG0780041735.01.T01:CDS |
CTGGCAGGCAAAGAATATTA+TGG | 0.438413 | 7:-94555252 | MsG0780041735.01.T01:intron |
CACTTGTCTCCATTTGGTTA+GGG | 0.438949 | 7:+94555895 | None:intergenic |
CATTCAATTGCTGGAGGGAC+AGG | 0.443706 | 7:-94556363 | MsG0780041735.01.T01:CDS |
CTGATGCTACCAATGACAAT+TGG | 0.448469 | 7:-94554008 | MsG0780041735.01.T01:CDS |
TCCAGAATTCCATACCGATC+TGG | 0.449492 | 7:+94557863 | None:intergenic |
ATTGCTGGAGGGACAGGCTC+AGG | 0.449849 | 7:-94556357 | MsG0780041735.01.T01:intron |
GCCTCTGACAGTGGAACGTC+AGG | 0.450901 | 7:-94555589 | MsG0780041735.01.T01:intron |
GAATTTGTTTGAGCAAATGT+TGG | 0.452915 | 7:+94555744 | None:intergenic |
ATCCCCAGATTATATCAAAT+GGG | 0.456784 | 7:-94553907 | MsG0780041735.01.T01:CDS |
TTATCCTGTCCAATTGTCAT+TGG | 0.458417 | 7:+94553999 | None:intergenic |
GCTGATCATGGTGGTGGTGC+TGG | 0.458497 | 7:-94557542 | MsG0780041735.01.T01:CDS |
GGGCAGTGCTGCAGGATCAC+TGG | 0.459086 | 7:-94553773 | MsG0780041735.01.T01:CDS |
TGAATTCCATTAATAACCCT+TGG | 0.461984 | 7:+94557611 | None:intergenic |
GGCTCAGACATTTACTGAAA+AGG | 0.462594 | 7:+94554199 | None:intergenic |
GATATAATCTGGGGATTCAC+AGG | 0.462754 | 7:+94553914 | None:intergenic |
CAGACATCACAGTAGAAACT+AGG | 0.469353 | 7:+94555721 | None:intergenic |
GTCATTAGAAAATGGCATCT+TGG | 0.471437 | 7:+94555621 | None:intergenic |
CAGTGTGTTCCCTAACCAAA+TGG | 0.473529 | 7:-94555904 | MsG0780041735.01.T01:CDS |
TTCCCCATTTGATATAATCT+GGG | 0.474962 | 7:+94553904 | None:intergenic |
AAGTCATTATTCATGTATCC+TGG | 0.481660 | 7:+94555675 | None:intergenic |
GCTAGTTAACTTTATTGAGT+GGG | 0.483561 | 7:-94554599 | MsG0780041735.01.T01:CDS |
ATATTGTCATTACCTGAGTT+GGG | 0.490303 | 7:+94555150 | None:intergenic |
AGAAAATGGCATCTTGGTGT+TGG | 0.491952 | 7:+94555627 | None:intergenic |
CCTGAGTAGCGAAATCTTCG+AGG | 0.493935 | 7:+94557800 | None:intergenic |
AGAATTTCTTTGTTTAGTAG+TGG | 0.496021 | 7:+94558006 | None:intergenic |
CAAATCAATCAATAAAGCAC+GGG | 0.496031 | 7:+94557637 | None:intergenic |
AGTGTCAAAAGTGAGTTATA+TGG | 0.497975 | 7:+94555858 | None:intergenic |
CCTCGAAGATTTCGCTACTC+AGG | 0.506650 | 7:-94557800 | MsG0780041735.01.T01:intron |
GAGTTGGGTCAACCTCTCCT+TGG | 0.508239 | 7:+94555165 | None:intergenic |
TTAGGTCAGCGGCCTTATGT+TGG | 0.508961 | 7:-94554244 | MsG0780041735.01.T01:intron |
GATGGCAGTGACAGTCTTGA+GGG | 0.509882 | 7:-94556399 | MsG0780041735.01.T01:CDS |
TTGGGCTAGTGGCTACCATC+AGG | 0.512567 | 7:-94557513 | MsG0780041735.01.T01:intron |
GAATTGATATATATTTAGCT+TGG | 0.513871 | 7:+94555198 | None:intergenic |
TCTTAATGCTGATTGTGTTG+TGG | 0.515975 | 7:-94555823 | MsG0780041735.01.T01:CDS |
ATTGATTGATTTGGAACCAA+GGG | 0.524085 | 7:-94557627 | MsG0780041735.01.T01:CDS |
TAGTATGACTAGCCAACATA+AGG | 0.524461 | 7:+94554232 | None:intergenic |
ACAACCACTCTTCGTTATCC+AGG | 0.524939 | 7:-94555693 | MsG0780041735.01.T01:CDS |
GATCCGAATAATATGATGAC+AGG | 0.524991 | 7:-94553799 | MsG0780041735.01.T01:CDS |
TTTGTTGCTGATCATGGTGG+TGG | 0.525133 | 7:-94557548 | MsG0780041735.01.T01:CDS |
AGGATATACGCCTCTGACAG+TGG | 0.526564 | 7:-94555598 | MsG0780041735.01.T01:CDS |
ACTATTGACACGAAGAATGC+TGG | 0.527775 | 7:-94553227 | MsG0780041735.01.T01:three_prime_UTR |
TGGTGGTGCTGGTAACAATT+GGG | 0.531520 | 7:-94557531 | MsG0780041735.01.T01:CDS |
AAAAGCAGAGTGCAATTTGG+CGG | 0.543842 | 7:-94558107 | MsG0780041735.01.T01:five_prime_UTR |
AGATTATATCAAATGGGGAA+TGG | 0.549783 | 7:-94553901 | MsG0780041735.01.T01:CDS |
AGCTAGTTAACTTTATTGAG+TGG | 0.551550 | 7:-94554600 | MsG0780041735.01.T01:CDS |
GCATCTGTTCTGTACTTGGA+TGG | 0.552762 | 7:-94554062 | MsG0780041735.01.T01:CDS |
GGCGGTTGAAAAGTAGAGAG+TGG | 0.555759 | 7:-94558089 | MsG0780041735.01.T01:five_prime_UTR |
AATACCACTGTCAATATGGT+TGG | 0.559593 | 7:-94553320 | MsG0780041735.01.T01:three_prime_UTR |
AATAATATGATGACAGGAGA+GGG | 0.566951 | 7:-94553793 | MsG0780041735.01.T01:CDS |
AGATGGCAGTGACAGTCTTG+AGG | 0.567168 | 7:-94556400 | MsG0780041735.01.T01:CDS |
CTAGTTAACTTTATTGAGTG+GGG | 0.569176 | 7:-94554598 | MsG0780041735.01.T01:CDS |
GCTACCAATGACAATTGGAC+AGG | 0.570687 | 7:-94554003 | MsG0780041735.01.T01:CDS |
TGTCATGAGGAGACTTCTGC+AGG | 0.571604 | 7:-94555341 | MsG0780041735.01.T01:intron |
ACCTGACGTTCCACTGTCAG+AGG | 0.573775 | 7:+94555588 | None:intergenic |
AGAGATAATCACACTTCAAG+TGG | 0.576431 | 7:-94557899 | MsG0780041735.01.T01:CDS |
ATGCGGAAACCAGATCGGTA+TGG | 0.576564 | 7:-94557872 | MsG0780041735.01.T01:CDS |
CCAAATCAATCAATAAAGCA+CGG | 0.577216 | 7:+94557636 | None:intergenic |
TTATGGTCTCTTCTTATGCA+CGG | 0.578464 | 7:-94555235 | MsG0780041735.01.T01:CDS |
CTATGTCATTCAATTGCTGG+AGG | 0.585953 | 7:-94556369 | MsG0780041735.01.T01:CDS |
TCCCCATTTGATATAATCTG+GGG | 0.589500 | 7:+94553905 | None:intergenic |
TCGCATACCTGAATACTAGC+AGG | 0.597022 | 7:+94554574 | None:intergenic |
GACAGTGGTATTCTGTACTA+CGG | 0.597610 | 7:+94553331 | None:intergenic |
TGCACTTAATAGAATTGCTG+TGG | 0.599504 | 7:-94555787 | MsG0780041735.01.T01:CDS |
GCTGGTAACAATTGGGCTAG+TGG | 0.599621 | 7:-94557524 | MsG0780041735.01.T01:CDS |
GGTGACGAGCAATAAGGAAG+TGG | 0.600143 | 7:-94553456 | MsG0780041735.01.T01:three_prime_UTR |
TTTGCTGTTTATTAGGTCAG+CGG | 0.602175 | 7:-94554255 | MsG0780041735.01.T01:intron |
ATAACGAAGAGTGGTTGTGC+TGG | 0.603190 | 7:+94555698 | None:intergenic |
AGGAGAGGTTGACCCAACTC+AGG | 0.603351 | 7:-94555162 | MsG0780041735.01.T01:intron |
ATATGTTCAAACTGCACACA+GGG | 0.604079 | 7:-94554435 | MsG0780041735.01.T01:intron |
TCAATTCTGAATATCATCCA+AGG | 0.606426 | 7:-94555182 | MsG0780041735.01.T01:CDS |
AGACATCACAGTAGAAACTA+GGG | 0.607333 | 7:+94555722 | None:intergenic |
GACATTTACTGAAAAGGTGA+CGG | 0.609104 | 7:+94554205 | None:intergenic |
TATTGATTGATTTGGAACCA+AGG | 0.610327 | 7:-94557628 | MsG0780041735.01.T01:CDS |
TCAAAAGTGAGTTATATGGT+TGG | 0.610753 | 7:+94555862 | None:intergenic |
GAACATGGTATCAGCAAAGA+CGG | 0.611540 | 7:-94557826 | MsG0780041735.01.T01:CDS |
GGACAATGCGGAAACCAGAT+CGG | 0.618984 | 7:-94557877 | MsG0780041735.01.T01:CDS |
GAGATAATCACACTTCAAGT+GGG | 0.619478 | 7:-94557898 | MsG0780041735.01.T01:CDS |
AGGATACATGAATAATGACT+TGG | 0.619688 | 7:-94555673 | MsG0780041735.01.T01:CDS |
AAACAACTCTGTCTCGAACA+TGG | 0.619782 | 7:-94557841 | MsG0780041735.01.T01:CDS |
ATGATTGACAGAGAAGCAGA+TGG | 0.626844 | 7:-94556417 | MsG0780041735.01.T01:CDS |
TACATGAATAATGACTTGGT+TGG | 0.628614 | 7:-94555669 | MsG0780041735.01.T01:CDS |
CATATGTTCAAACTGCACAC+AGG | 0.630458 | 7:-94554436 | MsG0780041735.01.T01:CDS |
GTGTTGGAATCAAAGAGGCA+AGG | 0.634632 | 7:+94555643 | None:intergenic |
TCCCCAGATTATATCAAATG+GGG | 0.635043 | 7:-94553906 | MsG0780041735.01.T01:CDS |
TTATATCAAATGGGGAATGG+AGG | 0.637675 | 7:-94553898 | MsG0780041735.01.T01:intron |
TGTGTGCAGTTTGAACATAT+GGG | 0.640655 | 7:+94554438 | None:intergenic |
AGGTTCATGAAAGTTTGCAG+AGG | 0.643924 | 7:-94554636 | MsG0780041735.01.T01:CDS |
GTGTGCAGTTTGAACATATG+GGG | 0.646116 | 7:+94554439 | None:intergenic |
TATGTCATTCAATTGCTGGA+GGG | 0.647449 | 7:-94556368 | MsG0780041735.01.T01:CDS |
TCTGAATATCATCCAAGGAG+AGG | 0.649229 | 7:-94555177 | MsG0780041735.01.T01:CDS |
TTGATTCATCAAACTCTGAG+AGG | 0.650287 | 7:+94553973 | None:intergenic |
TGAAGTGTGATTATCTCTCG+AGG | 0.657196 | 7:+94557904 | None:intergenic |
AAGAATGTTCAAAAGGTGTG+TGG | 0.660389 | 7:+94553192 | None:intergenic |
GAATAATATGATGACAGGAG+AGG | 0.675044 | 7:-94553794 | MsG0780041735.01.T01:CDS |
TCTTGGTGTTGGAATCAAAG+AGG | 0.676873 | 7:+94555638 | None:intergenic |
ACACGAAGAATGCTGGCAAG+TGG | 0.679689 | 7:-94553220 | MsG0780041735.01.T01:three_prime_UTR |
GGTTGAAAAGTAGAGAGTGG+TGG | 0.684934 | 7:-94558086 | MsG0780041735.01.T01:five_prime_UTR |
GTATCCTGGATAACGAAGAG+TGG | 0.693788 | 7:+94555689 | None:intergenic |
CCACTGTGCTTGATGTCATG+AGG | 0.693936 | 7:-94555354 | MsG0780041735.01.T01:CDS |
AAATCAATCAATAAAGCACG+GGG | 0.701160 | 7:+94557638 | None:intergenic |
ACACTTCAAGTGGGACAATG+CGG | 0.701458 | 7:-94557889 | MsG0780041735.01.T01:CDS |
CAAACCAACCATATTGACAG+TGG | 0.705654 | 7:+94553316 | None:intergenic |
AATGGAGACAAGTGATGTGG+TGG | 0.707586 | 7:-94555886 | MsG0780041735.01.T01:CDS |
CCAAATGGAGACAAGTGATG+TGG | 0.730166 | 7:-94555889 | MsG0780041735.01.T01:CDS |
CCTCATGACATCAAGCACAG+TGG | 0.730325 | 7:+94555354 | None:intergenic |
AGTGGTATTCTGTACTACGG+CGG | 0.752433 | 7:+94553334 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATAATAAATAAAATTGCA+AGG | + | Chr7:94554610-94554629 | None:intergenic | 10.0% |
!! | TATAATAAATAAAATTGCAA+GGG | + | Chr7:94554609-94554628 | None:intergenic | 10.0% |
!! | TATTTATTATATAACTAGAA+AGG | - | Chr7:94554618-94554637 | MsG0780041735.01.T01:CDS | 10.0% |
!!! | AAATAATTTTAAAAAAACAG+AGG | + | Chr7:94555298-94555317 | None:intergenic | 10.0% |
!!! | ATAGTTTAACATATATTTTT+AGG | - | Chr7:94557003-94557022 | MsG0780041735.01.T01:intron | 10.0% |
!!! | ATATTTTTTTAGATATTTGT+TGG | + | Chr7:94558070-94558089 | None:intergenic | 10.0% |
!!! | TATTTTTTTAGATATTTGTT+GGG | + | Chr7:94558069-94558088 | None:intergenic | 10.0% |
!!! | TTTATATTTTTTCTTTGTAT+AGG | - | Chr7:94557513-94557532 | MsG0780041735.01.T01:intron | 10.0% |
!! | AAATTCTCAATAAAGTTAAA+GGG | + | Chr7:94555066-94555085 | None:intergenic | 15.0% |
!! | TCTAATAATAATATCTTACT+TGG | + | Chr7:94557612-94557631 | None:intergenic | 15.0% |
!! | TGAAAATATTGATATGAAAT+TGG | + | Chr7:94557235-94557254 | None:intergenic | 15.0% |
!! | TTGTAGAATATTTAATAACT+TGG | + | Chr7:94554089-94554108 | None:intergenic | 15.0% |
!!! | AGATTAATTTCAATTTTTCA+AGG | + | Chr7:94556509-94556528 | None:intergenic | 15.0% |
!!! | ATTATGAAAACTTTCTTTTT+TGG | - | Chr7:94557917-94557936 | MsG0780041735.01.T01:exon | 15.0% |
!!! | ATTTTTTATTTATCTTGCTA+GGG | + | Chr7:94557682-94557701 | None:intergenic | 15.0% |
!!! | TCAACTATTTTAAAATGTAA+GGG | - | Chr7:94554771-94554790 | MsG0780041735.01.T01:intron | 15.0% |
!!! | TTAACATATATTTTTAGGAA+TGG | - | Chr7:94557008-94557027 | MsG0780041735.01.T01:intron | 15.0% |
!!! | TTAGTGTTATTTTTTCAAAA+AGG | - | Chr7:94553380-94553399 | MsG0780041735.01.T01:three_prime_UTR | 15.0% |
!! | AATCATAATACAGTTTAGAA+AGG | + | Chr7:94556658-94556677 | None:intergenic | 20.0% |
!! | AATTCTCAATAAAGTTAAAG+GGG | + | Chr7:94555065-94555084 | None:intergenic | 20.0% |
!! | ATCATAATACAGTTTAGAAA+GGG | + | Chr7:94556657-94556676 | None:intergenic | 20.0% |
!! | CAAATTCTCAATAAAGTTAA+AGG | + | Chr7:94555067-94555086 | None:intergenic | 20.0% |
!! | GAATTGATATATATTTAGCT+TGG | + | Chr7:94556139-94556158 | None:intergenic | 20.0% |
!! | GATAAGCATAAAAATAAAGA+CGG | + | Chr7:94556949-94556968 | None:intergenic | 20.0% |
!! | TCTTCTATTAAAAAATACCA+CGG | + | Chr7:94556308-94556327 | None:intergenic | 20.0% |
!! | TGTATTGTTTGTTTATCATT+TGG | - | Chr7:94557973-94557992 | MsG0780041735.01.T01:five_prime_UTR | 20.0% |
!!! | CATTTTTTATTTATCTTGCT+AGG | + | Chr7:94557683-94557702 | None:intergenic | 20.0% |
!!! | GTCAACTATTTTAAAATGTA+AGG | - | Chr7:94554770-94554789 | MsG0780041735.01.T01:intron | 20.0% |
!!! | TATGATTTTAATGTTCTCTA+TGG | - | Chr7:94556671-94556690 | MsG0780041735.01.T01:intron | 20.0% |
!!! | TGGTATTTTTTAATAGAAGA+TGG | - | Chr7:94556308-94556327 | MsG0780041735.01.T01:intron | 20.0% |
!!! | TTTTTTATTTATCTTGCTAG+GGG | + | Chr7:94557681-94557700 | None:intergenic | 20.0% |
! | AAACAAAAAAATGAAAAGCG+AGG | + | Chr7:94557476-94557495 | None:intergenic | 25.0% |
! | AAATAAAGAAGGAAATCAAG+AGG | + | Chr7:94554291-94554310 | None:intergenic | 25.0% |
! | ACAAGAATCTTAGACATTTA+TGG | + | Chr7:94557844-94557863 | None:intergenic | 25.0% |
! | AGGTTATCCATCTTAAATAT+AGG | + | Chr7:94555253-94555272 | None:intergenic | 25.0% |
! | ATGAAAAACATAAAGGTTGA+AGG | - | Chr7:94554572-94554591 | MsG0780041735.01.T01:intron | 25.0% |
! | ATTAATTTCCAGCAAATTGT+CGG | + | Chr7:94555112-94555131 | None:intergenic | 25.0% |
! | ATTATTATTAGACCATAAGC+AGG | - | Chr7:94557620-94557639 | MsG0780041735.01.T01:CDS | 25.0% |
! | ATTCTCAATAAAGTTAAAGG+GGG | + | Chr7:94555064-94555083 | None:intergenic | 25.0% |
! | CACTAACAATAGAATAGAAA+TGG | + | Chr7:94553366-94553385 | None:intergenic | 25.0% |
! | CATCAAACTAAATATGAAAG+AGG | + | Chr7:94556830-94556849 | None:intergenic | 25.0% |
! | GTGAGAAATATTTAAGCAAT+CGG | + | Chr7:94555276-94555295 | None:intergenic | 25.0% |
! | TACGGAGGAAATATAAAATA+GGG | + | Chr7:94555914-94555933 | None:intergenic | 25.0% |
! | TATATCCTGTCATTAGAAAA+TGG | + | Chr7:94555724-94555743 | None:intergenic | 25.0% |
! | TCTCATGATTGTAAAGATTA+CGG | + | Chr7:94553761-94553780 | None:intergenic | 25.0% |
! | TCTTAAATATAGGAAGTCAA+AGG | + | Chr7:94555243-94555262 | None:intergenic | 25.0% |
! | TCTTTACAGGACAAAAATTT+AGG | + | Chr7:94555827-94555846 | None:intergenic | 25.0% |
! | TGAAAAACATAAAGGTTGAA+GGG | - | Chr7:94554573-94554592 | MsG0780041735.01.T01:intron | 25.0% |
! | TGAAATATGAACGTTAAATG+TGG | - | Chr7:94557701-94557720 | MsG0780041735.01.T01:intron | 25.0% |
! | TGAAATTAATCTTCAACTGA+TGG | - | Chr7:94556517-94556536 | MsG0780041735.01.T01:intron | 25.0% |
! | TTAATGTTCTCTATGGATTT+AGG | - | Chr7:94556678-94556697 | MsG0780041735.01.T01:intron | 25.0% |
! | TTACGGAGGAAATATAAAAT+AGG | + | Chr7:94555915-94555934 | None:intergenic | 25.0% |
! | TTGACTTCCTATATTTAAGA+TGG | - | Chr7:94555243-94555262 | MsG0780041735.01.T01:CDS | 25.0% |
!! | AGAATTTCTTTGTTTAGTAG+TGG | + | Chr7:94553331-94553350 | None:intergenic | 25.0% |
!!! | AAATTGCTTTTAACGCATAA+TGG | - | Chr7:94555193-94555212 | MsG0780041735.01.T01:CDS | 25.0% |
!!! | AATATTTTTGTTGCTGATCA+TGG | - | Chr7:94553780-94553799 | MsG0780041735.01.T01:CDS | 25.0% |
!!! | TGAAAACTTTCTTTTTTGGA+TGG | - | Chr7:94557921-94557940 | MsG0780041735.01.T01:exon | 25.0% |
!!! | TGCTCGAAATATCATTTTTA+TGG | + | Chr7:94555793-94555812 | None:intergenic | 25.0% |
!!! | TTTCTTCATACTACTGATTT+TGG | + | Chr7:94557589-94557608 | None:intergenic | 25.0% |
AAAAACTACCGTATTATGGA+AGG | + | Chr7:94554674-94554693 | None:intergenic | 30.0% | |
AAATCAATCAATAAAGCACG+GGG | + | Chr7:94553699-94553718 | None:intergenic | 30.0% | |
AAATGAGCTCAACAAATGAA+TGG | + | Chr7:94556281-94556300 | None:intergenic | 30.0% | |
AACTGAAACTGAGTTACAAA+AGG | - | Chr7:94556248-94556267 | MsG0780041735.01.T01:intron | 30.0% | |
AAGAGACATTATTGAGAGTT+TGG | - | Chr7:94557382-94557401 | MsG0780041735.01.T01:intron | 30.0% | |
AAGTCATTATTCATGTATCC+TGG | + | Chr7:94555662-94555681 | None:intergenic | 30.0% | |
AATAATATGATGACAGGAGA+GGG | - | Chr7:94557541-94557560 | MsG0780041735.01.T01:CDS | 30.0% | |
AATATCATCCGATCAGATTA+CGG | + | Chr7:94555932-94555951 | None:intergenic | 30.0% | |
AATATTGTCATTACCTGAGT+TGG | + | Chr7:94556188-94556207 | None:intergenic | 30.0% | |
AATCCCCAGATTATATCAAA+TGG | - | Chr7:94557426-94557445 | MsG0780041735.01.T01:intron | 30.0% | |
ACGGAGGAAATATAAAATAG+GGG | + | Chr7:94555913-94555932 | None:intergenic | 30.0% | |
ACTAGAGACTGAATACATAA+AGG | + | Chr7:94554324-94554343 | None:intergenic | 30.0% | |
ACTCAGTTTCAGTTAACAAA+TGG | + | Chr7:94556242-94556261 | None:intergenic | 30.0% | |
AGAAATATTTAAGCAATCGG+AGG | + | Chr7:94555273-94555292 | None:intergenic | 30.0% | |
AGAAGGAATAGAAATTAGAG+AGG | - | Chr7:94554215-94554234 | MsG0780041735.01.T01:CDS | 30.0% | |
AGATTATATCAAATGGGGAA+TGG | - | Chr7:94557433-94557452 | MsG0780041735.01.T01:intron | 30.0% | |
AGCTAGTTAACTTTATTGAG+TGG | - | Chr7:94556734-94556753 | MsG0780041735.01.T01:intron | 30.0% | |
AGGATACATGAATAATGACT+TGG | - | Chr7:94555661-94555680 | MsG0780041735.01.T01:CDS | 30.0% | |
AGTGTCAAAAGTGAGTTATA+TGG | + | Chr7:94555479-94555498 | None:intergenic | 30.0% | |
ATATTGTCATTACCTGAGTT+GGG | + | Chr7:94556187-94556206 | None:intergenic | 30.0% | |
ATCCCCAGATTATATCAAAT+GGG | - | Chr7:94557427-94557446 | MsG0780041735.01.T01:intron | 30.0% | |
ATGTGACGTTAATTAGAAGA+AGG | + | Chr7:94556438-94556457 | None:intergenic | 30.0% | |
ATTAAAGTAAGCATACCTGA+TGG | + | Chr7:94553839-94553858 | None:intergenic | 30.0% | |
ATTAATCTTACACTCAAGAG+CGG | - | Chr7:94555126-94555145 | MsG0780041735.01.T01:intron | 30.0% | |
ATTCCCCATTTGATATAATC+TGG | + | Chr7:94557434-94557453 | None:intergenic | 30.0% | |
CAAAACAACAGAATCTTTAC+AGG | + | Chr7:94555840-94555859 | None:intergenic | 30.0% | |
CAAATCAATCAATAAAGCAC+GGG | + | Chr7:94553700-94553719 | None:intergenic | 30.0% | |
CATCTAAAAAACACAAAACC+AGG | + | Chr7:94554705-94554724 | None:intergenic | 30.0% | |
CCAAATCAATCAATAAAGCA+CGG | + | Chr7:94553701-94553720 | None:intergenic | 30.0% | |
CTAGTTAACTTTATTGAGTG+GGG | - | Chr7:94556736-94556755 | MsG0780041735.01.T01:intron | 30.0% | |
GAAACTTATATGATGTCCTA+AGG | + | Chr7:94555033-94555052 | None:intergenic | 30.0% | |
GAAGGAATAGAAATTAGAGA+GGG | - | Chr7:94554216-94554235 | MsG0780041735.01.T01:CDS | 30.0% | |
GAATGTTGAAGAAGACATAA+TGG | - | Chr7:94554892-94554911 | MsG0780041735.01.T01:intron | 30.0% | |
GAGAACTGGAAAAATAAAGA+AGG | + | Chr7:94554302-94554321 | None:intergenic | 30.0% | |
GCTAGTTAACTTTATTGAGT+GGG | - | Chr7:94556735-94556754 | MsG0780041735.01.T01:intron | 30.0% | |
GCTTCACATGAAAAACATAA+AGG | - | Chr7:94554565-94554584 | MsG0780041735.01.T01:intron | 30.0% | |
GTACAAAAACTACCGTATTA+TGG | + | Chr7:94554678-94554697 | None:intergenic | 30.0% | |
GTTATTCCATTCATTTATGC+AGG | - | Chr7:94555344-94555363 | MsG0780041735.01.T01:CDS | 30.0% | |
TAGGAATGGTTATTATTCTG+AGG | - | Chr7:94557022-94557041 | MsG0780041735.01.T01:intron | 30.0% | |
TCAAAAGTGAGTTATATGGT+TGG | + | Chr7:94555475-94555494 | None:intergenic | 30.0% | |
TCAAATTCAATCAATGACTC+TGG | - | Chr7:94554490-94554509 | MsG0780041735.01.T01:intron | 30.0% | |
TCAATTCTGAATATCATCCA+AGG | - | Chr7:94556152-94556171 | MsG0780041735.01.T01:intron | 30.0% | |
TCAGCAAAATTAGTAGTGAA+TGG | - | Chr7:94554119-94554138 | MsG0780041735.01.T01:intron | 30.0% | |
TCGTCAACATTACATTCAAA+TGG | + | Chr7:94557792-94557811 | None:intergenic | 30.0% | |
TCTCCTGTCATCATATTATT+CGG | + | Chr7:94557541-94557560 | None:intergenic | 30.0% | |
TGAATTCCATTAATAACCCT+TGG | + | Chr7:94553726-94553745 | None:intergenic | 30.0% | |
TGGTTGTTAATATCTGATCA+GGG | - | Chr7:94554866-94554885 | MsG0780041735.01.T01:intron | 30.0% | |
TTATGGAGAAAATGACACAA+AGG | + | Chr7:94555776-94555795 | None:intergenic | 30.0% | |
TTCCCCATTTGATATAATCT+GGG | + | Chr7:94557433-94557452 | None:intergenic | 30.0% | |
! | AGTGTCTTTTGCTTGTAAAT+TGG | - | Chr7:94554341-94554360 | MsG0780041735.01.T01:intron | 30.0% |
! | ATTAGTTTACCTTCCTTCTA+GGG | - | Chr7:94557755-94557774 | MsG0780041735.01.T01:intron | 30.0% |
! | ATTCATTTGTTGAGCTCATT+TGG | - | Chr7:94556280-94556299 | MsG0780041735.01.T01:intron | 30.0% |
! | GAATTTGTTTGAGCAAATGT+TGG | + | Chr7:94555593-94555612 | None:intergenic | 30.0% |
! | GATTTTCTTTAGCATGCTAA+TGG | - | Chr7:94554040-94554059 | MsG0780041735.01.T01:CDS | 30.0% |
! | TGAGTGATGAGTTACATTTT+TGG | - | Chr7:94554818-94554837 | MsG0780041735.01.T01:intron | 30.0% |
! | TTTTTCCTAGTATTTGCCTT+AGG | - | Chr7:94555014-94555033 | MsG0780041735.01.T01:intron | 30.0% |
!! | AATGGTTATTATTCTGAGGT+TGG | - | Chr7:94557026-94557045 | MsG0780041735.01.T01:intron | 30.0% |
!! | ACAATCTTATCTTGCTTTTC+TGG | - | Chr7:94556850-94556869 | MsG0780041735.01.T01:intron | 30.0% |
!! | ATTGATTGATTTGGAACCAA+GGG | - | Chr7:94553707-94553726 | MsG0780041735.01.T01:intron | 30.0% |
!! | CAATATGGTTGGTTTGTTAT+TGG | - | Chr7:94558025-94558044 | MsG0780041735.01.T01:five_prime_UTR | 30.0% |
!! | TACATGAATAATGACTTGGT+TGG | - | Chr7:94555665-94555684 | MsG0780041735.01.T01:CDS | 30.0% |
!! | TATTGATTGATTTGGAACCA+AGG | - | Chr7:94553706-94553725 | MsG0780041735.01.T01:intron | 30.0% |
!!! | ATTCTGTTGTTTTGTTGAAC+TGG | - | Chr7:94555846-94555865 | MsG0780041735.01.T01:CDS | 30.0% |
!!! | ATTTCTTTTTCAGCTTCTAC+TGG | - | Chr7:94556389-94556408 | MsG0780041735.01.T01:CDS | 30.0% |
!!! | TGGCTCATTTTGAGTTAAAA+AGG | + | Chr7:94557824-94557843 | None:intergenic | 30.0% |
!!! | TTTCTTTTTTGGATGGTTTG+CGG | - | Chr7:94557928-94557947 | MsG0780041735.01.T01:exon | 30.0% |
AACGCATAATGGCTAAGAAT+TGG | - | Chr7:94555204-94555223 | MsG0780041735.01.T01:CDS | 35.0% | |
AAGAAAAGCAGAGTGCAATT+TGG | - | Chr7:94553224-94553243 | MsG0780041735.01.T01:three_prime_UTR | 35.0% | |
AAGATTCTTGTGTACTTGAC+TGG | - | Chr7:94557853-94557872 | MsG0780041735.01.T01:CDS | 35.0% | |
AAGGGAAGGAATATGTGTAA+GGG | - | Chr7:94554179-94554198 | MsG0780041735.01.T01:intron | 35.0% | |
AATACCACTGTCAATATGGT+TGG | - | Chr7:94558014-94558033 | MsG0780041735.01.T01:five_prime_UTR | 35.0% | |
ACAGAATACCACTGTCAATA+TGG | - | Chr7:94558010-94558029 | MsG0780041735.01.T01:five_prime_UTR | 35.0% | |
ACGCATAATGGCTAAGAATT+GGG | - | Chr7:94555205-94555224 | MsG0780041735.01.T01:CDS | 35.0% | |
AGACATCACAGTAGAAACTA+GGG | + | Chr7:94555615-94555634 | None:intergenic | 35.0% | |
AGAGATAATCACACTTCAAG+TGG | - | Chr7:94553435-94553454 | MsG0780041735.01.T01:three_prime_UTR | 35.0% | |
AGTCACAATTCCTGTAATCA+AGG | - | Chr7:94554160-94554179 | MsG0780041735.01.T01:intron | 35.0% | |
AGTCAGTGTATAAACTAAGG+AGG | + | Chr7:94554375-94554394 | None:intergenic | 35.0% | |
ATAGTTGACTAAGACTCCTA+TGG | + | Chr7:94554759-94554778 | None:intergenic | 35.0% | |
ATATGTTCAAACTGCACACA+GGG | - | Chr7:94556899-94556918 | MsG0780041735.01.T01:intron | 35.0% | |
ATATTCCTTCCCTTGATTAC+AGG | + | Chr7:94554173-94554192 | None:intergenic | 35.0% | |
ATCCTGATAGATCATTCCAT+AGG | - | Chr7:94554740-94554759 | MsG0780041735.01.T01:intron | 35.0% | |
ATCGTCAACCTTCCATAATA+CGG | - | Chr7:94554663-94554682 | MsG0780041735.01.T01:intron | 35.0% | |
CAATCAGATGTAATGCAGAA+AGG | + | Chr7:94556975-94556994 | None:intergenic | 35.0% | |
CCATTCATTTATGCAGGTAT+GGG | - | Chr7:94555350-94555369 | MsG0780041735.01.T01:CDS | 35.0% | |
CGGAGGAAATATAAAATAGG+GGG | + | Chr7:94555912-94555931 | None:intergenic | 35.0% | |
CTCTATTGACATTAAGTTCC+TGG | - | Chr7:94556063-94556082 | MsG0780041735.01.T01:intron | 35.0% | |
CTGAATACATAAAGGAGAAC+TGG | + | Chr7:94554316-94554335 | None:intergenic | 35.0% | |
GAAATCAAGAGGAGAAAGAT+CGG | + | Chr7:94554280-94554299 | None:intergenic | 35.0% | |
GAACACTTACAGCAAACATT+GGG | + | Chr7:94557213-94557232 | None:intergenic | 35.0% | |
GAATAATATGATGACAGGAG+AGG | - | Chr7:94557540-94557559 | MsG0780041735.01.T01:CDS | 35.0% | |
GACATTTACTGAAAAGGTGA+CGG | + | Chr7:94557132-94557151 | None:intergenic | 35.0% | |
GACTTGAGTATAAGATTGCT+TGG | + | Chr7:94556482-94556501 | None:intergenic | 35.0% | |
GAGATAATCACACTTCAAGT+GGG | - | Chr7:94553436-94553455 | MsG0780041735.01.T01:three_prime_UTR | 35.0% | |
GAGTTTGGTTGACGAATATA+AGG | - | Chr7:94557397-94557416 | MsG0780041735.01.T01:intron | 35.0% | |
GATCCGAATAATATGATGAC+AGG | - | Chr7:94557535-94557554 | MsG0780041735.01.T01:CDS | 35.0% | |
GGAGGAAATATAAAATAGGG+GGG | + | Chr7:94555911-94555930 | None:intergenic | 35.0% | |
GGCAATTTACAACATAAGTC+TGG | - | Chr7:94554011-94554030 | MsG0780041735.01.T01:CDS | 35.0% | |
GTCACAATTCCTGTAATCAA+GGG | - | Chr7:94554161-94554180 | MsG0780041735.01.T01:intron | 35.0% | |
GTCATTAGAAAATGGCATCT+TGG | + | Chr7:94555716-94555735 | None:intergenic | 35.0% | |
GTGGTTGTTAATATCTGATC+AGG | - | Chr7:94554865-94554884 | MsG0780041735.01.T01:intron | 35.0% | |
GTTCTATGTCATTCAATTGC+TGG | - | Chr7:94554962-94554981 | MsG0780041735.01.T01:intron | 35.0% | |
TAATAAACAGCAAAGCACAC+AGG | + | Chr7:94557073-94557092 | None:intergenic | 35.0% | |
TAATCTTCAACTGATGGTTG+TGG | - | Chr7:94556523-94556542 | MsG0780041735.01.T01:intron | 35.0% | |
TATGTCATTCAATTGCTGGA+GGG | - | Chr7:94554966-94554985 | MsG0780041735.01.T01:intron | 35.0% | |
TATTTCCTCCGTAATCTGAT+CGG | - | Chr7:94555921-94555940 | MsG0780041735.01.T01:CDS | 35.0% | |
TCAGATATTAACAACCACAC+AGG | + | Chr7:94554863-94554882 | None:intergenic | 35.0% | |
TCCATTCATTTATGCAGGTA+TGG | - | Chr7:94555349-94555368 | MsG0780041735.01.T01:CDS | 35.0% | |
TCCCCAGATTATATCAAATG+GGG | - | Chr7:94557428-94557447 | MsG0780041735.01.T01:intron | 35.0% | |
TCCCCATTTGATATAATCTG+GGG | + | Chr7:94557432-94557451 | None:intergenic | 35.0% | |
TCCTTAGTTTATACACTGAC+TGG | - | Chr7:94554374-94554393 | MsG0780041735.01.T01:intron | 35.0% | |
TGCACTTAATAGAATTGCTG+TGG | - | Chr7:94555547-94555566 | MsG0780041735.01.T01:intron | 35.0% | |
TGCATTACATCTGATTGCAT+TGG | - | Chr7:94556978-94556997 | MsG0780041735.01.T01:intron | 35.0% | |
TGTGTGCAGTTTGAACATAT+GGG | + | Chr7:94556899-94556918 | None:intergenic | 35.0% | |
TTAGTAGTGAATGGACAGAT+AGG | - | Chr7:94554128-94554147 | MsG0780041735.01.T01:intron | 35.0% | |
TTATATCAAATGGGGAATGG+AGG | - | Chr7:94557436-94557455 | MsG0780041735.01.T01:intron | 35.0% | |
TTATCCTGTCCAATTGTCAT+TGG | + | Chr7:94557338-94557357 | None:intergenic | 35.0% | |
TTATGGTCTCTTCTTATGCA+CGG | - | Chr7:94556099-94556118 | MsG0780041735.01.T01:intron | 35.0% | |
TTGATTCATCAAACTCTGAG+AGG | + | Chr7:94557364-94557383 | None:intergenic | 35.0% | |
TTGGAACCAAGGGTTATTAA+TGG | - | Chr7:94553717-94553736 | MsG0780041735.01.T01:intron | 35.0% | |
! | ATTTTTGTTGCTGATCATGG+TGG | - | Chr7:94553783-94553802 | MsG0780041735.01.T01:CDS | 35.0% |
! | CATTAGTTTACCTTCCTTCT+AGG | - | Chr7:94557754-94557773 | MsG0780041735.01.T01:intron | 35.0% |
! | CCGTGCTTTATTGATTGATT+TGG | - | Chr7:94553698-94553717 | MsG0780041735.01.T01:intron | 35.0% |
! | CCTTAGTTTATACACTGACT+GGG | - | Chr7:94554375-94554394 | MsG0780041735.01.T01:intron | 35.0% |
! | TAGTATGACTAGCCAACATA+AGG | + | Chr7:94557105-94557124 | None:intergenic | 35.0% |
! | TCTTAATGCTGATTGTGTTG+TGG | - | Chr7:94555511-94555530 | MsG0780041735.01.T01:intron | 35.0% |
! | TTGAACATATGGGGATTTTC+TGG | + | Chr7:94556889-94556908 | None:intergenic | 35.0% |
!! | ACAAGTGAAGCATTGTGTAA+TGG | + | Chr7:94554462-94554481 | None:intergenic | 35.0% |
!! | TCTTATCTTGCTTTTCTGGT+AGG | - | Chr7:94556854-94556873 | MsG0780041735.01.T01:intron | 35.0% |
!! | TGTGTGCTTTGCTGTTTATT+AGG | - | Chr7:94557072-94557091 | MsG0780041735.01.T01:intron | 35.0% |
!! | TTTGCTGTTTATTAGGTCAG+CGG | - | Chr7:94557079-94557098 | MsG0780041735.01.T01:intron | 35.0% |
!!! | AGATGCCATTTTCTAATGAC+AGG | - | Chr7:94555716-94555735 | MsG0780041735.01.T01:CDS | 35.0% |
!!! | ATCTCTCGAGGCATTTTTTA+GGG | + | Chr7:94553421-94553440 | None:intergenic | 35.0% |
!!! | GAACCAGTTTTTTGCTGTAT+CGG | + | Chr7:94555403-94555422 | None:intergenic | 35.0% |
!!! | TATCTCTCGAGGCATTTTTT+AGG | + | Chr7:94553422-94553441 | None:intergenic | 35.0% |
AAAAGCAGAGTGCAATTTGG+CGG | - | Chr7:94553227-94553246 | MsG0780041735.01.T01:three_prime_UTR | 40.0% | |
AAACAACTCTGTCTCGAACA+TGG | - | Chr7:94553493-94553512 | MsG0780041735.01.T01:intron | 40.0% | |
AAGGAATATGTGTAAGGGCA+AGG | - | Chr7:94554184-94554203 | MsG0780041735.01.T01:intron | 40.0% | |
AAGGTTGACGATATTCCTGT+CGG | + | Chr7:94554655-94554674 | None:intergenic | 40.0% | |
AAGTTGTTGAGAGAGAGAAG+GGG | + | Chr7:94553568-94553587 | None:intergenic | 40.0% | |
ACTATTGACACGAAGAATGC+TGG | - | Chr7:94558107-94558126 | MsG0780041735.01.T01:five_prime_UTR | 40.0% | |
ACTCGAAGAAAACCTGCTTA+TGG | + | Chr7:94557635-94557654 | None:intergenic | 40.0% | |
AGAAGTTGTTGAGAGAGAGA+AGG | + | Chr7:94553570-94553589 | None:intergenic | 40.0% | |
AGGTTCATGAAAGTTTGCAG+AGG | - | Chr7:94556698-94556717 | MsG0780041735.01.T01:intron | 40.0% | |
ATAACTAGAAAGGCCTCAGA+TGG | - | Chr7:94554628-94554647 | MsG0780041735.01.T01:CDS | 40.0% | |
ATCGGATGATATTTCCTTGC+AGG | - | Chr7:94555939-94555958 | MsG0780041735.01.T01:CDS | 40.0% | |
ATGATTGACAGAGAAGCAGA+TGG | - | Chr7:94554917-94554936 | MsG0780041735.01.T01:intron | 40.0% | |
ATTGACATTAAGTTCCTGGC+AGG | - | Chr7:94556067-94556086 | MsG0780041735.01.T01:intron | 40.0% | |
CAAACCAACCATATTGACAG+TGG | + | Chr7:94558021-94558040 | None:intergenic | 40.0% | |
CAAGGGAAGGAATATGTGTA+AGG | - | Chr7:94554178-94554197 | MsG0780041735.01.T01:intron | 40.0% | |
CAATTCCTGTAATCAAGGGA+AGG | - | Chr7:94554165-94554184 | MsG0780041735.01.T01:intron | 40.0% | |
CACTTGTCTCCATTTGGTTA+GGG | + | Chr7:94555442-94555461 | None:intergenic | 40.0% | |
CAGACATCACAGTAGAAACT+AGG | + | Chr7:94555616-94555635 | None:intergenic | 40.0% | |
CATAATATTCTTTGCCTGCC+AGG | + | Chr7:94556084-94556103 | None:intergenic | 40.0% | |
CATATGTTCAAACTGCACAC+AGG | - | Chr7:94556898-94556917 | MsG0780041735.01.T01:intron | 40.0% | |
CCCAGTCAGTGTATAAACTA+AGG | + | Chr7:94554378-94554397 | None:intergenic | 40.0% | |
CCCATACCTGCATAAATGAA+TGG | + | Chr7:94555353-94555372 | None:intergenic | 40.0% | |
CTATGTCATTCAATTGCTGG+AGG | - | Chr7:94554965-94554984 | MsG0780041735.01.T01:intron | 40.0% | |
CTCCTATGGAATGATCTATC+AGG | + | Chr7:94554745-94554764 | None:intergenic | 40.0% | |
CTGATGCTACCAATGACAAT+TGG | - | Chr7:94557326-94557345 | MsG0780041735.01.T01:intron | 40.0% | |
CTGGCAGGCAAAGAATATTA+TGG | - | Chr7:94556082-94556101 | MsG0780041735.01.T01:intron | 40.0% | |
CTGTGTGCAGTTTGAACATA+TGG | + | Chr7:94556900-94556919 | None:intergenic | 40.0% | |
CTTAAGAACCGACAATTTGC+TGG | - | Chr7:94555101-94555120 | MsG0780041735.01.T01:intron | 40.0% | |
GAACATGGTATCAGCAAAGA+CGG | - | Chr7:94553508-94553527 | MsG0780041735.01.T01:intron | 40.0% | |
GAAGTTGTTGAGAGAGAGAA+GGG | + | Chr7:94553569-94553588 | None:intergenic | 40.0% | |
GAATCAATTGTGAACCTGTG+TGG | - | Chr7:94554846-94554865 | MsG0780041735.01.T01:intron | 40.0% | |
GACAGTGGTATTCTGTACTA+CGG | + | Chr7:94558006-94558025 | None:intergenic | 40.0% | |
GATATAATCTGGGGATTCAC+AGG | + | Chr7:94557423-94557442 | None:intergenic | 40.0% | |
GATGTCCTAAGGCAAATACT+AGG | + | Chr7:94555022-94555041 | None:intergenic | 40.0% | |
GGAACACTTACAGCAAACAT+TGG | + | Chr7:94557214-94557233 | None:intergenic | 40.0% | |
GGCTCAGACATTTACTGAAA+AGG | + | Chr7:94557138-94557157 | None:intergenic | 40.0% | |
GGTCATTCAGAGTCTCTAAA+AGG | + | Chr7:94555382-94555401 | None:intergenic | 40.0% | |
GTGTGCAGTTTGAACATATG+GGG | + | Chr7:94556898-94556917 | None:intergenic | 40.0% | |
GTTTGCACAGTTCTCAATGT+TGG | - | Chr7:94553990-94554009 | MsG0780041735.01.T01:CDS | 40.0% | |
TCAAGAGCGGAAATTGAACA+GGG | - | Chr7:94555139-94555158 | MsG0780041735.01.T01:intron | 40.0% | |
TCACTTGTCTCCATTTGGTT+AGG | + | Chr7:94555443-94555462 | None:intergenic | 40.0% | |
TCCTTCTCAACTTATCGTAC+TGG | + | Chr7:94557159-94557178 | None:intergenic | 40.0% | |
TCTGAATATCATCCAAGGAG+AGG | - | Chr7:94556157-94556176 | MsG0780041735.01.T01:intron | 40.0% | |
TGAAGTGTGATTATCTCTCG+AGG | + | Chr7:94553433-94553452 | None:intergenic | 40.0% | |
TGACCGATACAGCAAAAAAC+TGG | - | Chr7:94555397-94555416 | MsG0780041735.01.T01:intron | 40.0% | |
! | AAGTCTTATCCGACTAAGTG+AGG | + | Chr7:94553878-94553897 | None:intergenic | 40.0% |
! | ACGAATTACATTAGCCTGCA+AGG | + | Chr7:94555956-94555975 | None:intergenic | 40.0% |
! | AGAAAATGGCATCTTGGTGT+TGG | + | Chr7:94555710-94555729 | None:intergenic | 40.0% |
! | GGTAGTTTTTGTACAGTACC+TGG | - | Chr7:94554684-94554703 | MsG0780041735.01.T01:intron | 40.0% |
! | TTTATACACTGACTGGGAGT+TGG | - | Chr7:94554381-94554400 | MsG0780041735.01.T01:intron | 40.0% |
!! | GCAATAAGGAAGTGGTTTTG+TGG | - | Chr7:94557886-94557905 | MsG0780041735.01.T01:CDS | 40.0% |
!! | TCTTGGTGTTGGAATCAAAG+AGG | + | Chr7:94555699-94555718 | None:intergenic | 40.0% |
!! | TTTAGCTTGGCTAGCATCTT+TGG | + | Chr7:94556126-94556145 | None:intergenic | 40.0% |
!!! | ATAAGGAAGTGGTTTTGTGG+CGG | - | Chr7:94557889-94557908 | MsG0780041735.01.T01:CDS | 40.0% |
!!! | CGAGGCATTTTTTAGGGTTT+CGG | + | Chr7:94553415-94553434 | None:intergenic | 40.0% |
!!! | GCATTTTTTAGGGTTTCGGA+GGG | + | Chr7:94553411-94553430 | None:intergenic | 40.0% |
AAGAGCGGAAATTGAACAGG+GGG | - | Chr7:94555141-94555160 | MsG0780041735.01.T01:intron | 45.0% | |
AATGGAGACAAGTGATGTGG+TGG | - | Chr7:94555448-94555467 | MsG0780041735.01.T01:intron | 45.0% | |
ACAACCACTCTTCGTTATCC+AGG | - | Chr7:94555641-94555660 | MsG0780041735.01.T01:CDS | 45.0% | |
ACACTTCAAGTGGGACAATG+CGG | - | Chr7:94553445-94553464 | MsG0780041735.01.T01:three_prime_UTR | 45.0% | |
ACCAGATCGGTATGGAATTC+TGG | - | Chr7:94553470-94553489 | MsG0780041735.01.T01:intron | 45.0% | |
AGGGCAAGGTGTATAAGAGA+AGG | - | Chr7:94554198-94554217 | MsG0780041735.01.T01:CDS | 45.0% | |
AGTGGTATTCTGTACTACGG+CGG | + | Chr7:94558003-94558022 | None:intergenic | 45.0% | |
ATAACGAAGAGTGGTTGTGC+TGG | + | Chr7:94555639-94555658 | None:intergenic | 45.0% | |
ATCAAATGGGGAATGGAGGT+AGG | - | Chr7:94557440-94557459 | MsG0780041735.01.T01:intron | 45.0% | |
ATCATCCGATCAGATTACGG+AGG | + | Chr7:94555929-94555948 | None:intergenic | 45.0% | |
CAAGAGCGGAAATTGAACAG+GGG | - | Chr7:94555140-94555159 | MsG0780041735.01.T01:intron | 45.0% | |
CAATCAATGACTCTGGTGTC+TGG | - | Chr7:94554497-94554516 | MsG0780041735.01.T01:intron | 45.0% | |
CAGTGTGTTCCCTAACCAAA+TGG | - | Chr7:94555430-94555449 | MsG0780041735.01.T01:intron | 45.0% | |
CCAAATGGAGACAAGTGATG+TGG | - | Chr7:94555445-94555464 | MsG0780041735.01.T01:intron | 45.0% | |
CCACATCACTTGTCTCCATT+TGG | + | Chr7:94555448-94555467 | None:intergenic | 45.0% | |
CTCAAGAGCGGAAATTGAAC+AGG | - | Chr7:94555138-94555157 | MsG0780041735.01.T01:intron | 45.0% | |
CTTATCCGACTAAGTGAGGT+CGG | + | Chr7:94553874-94553893 | None:intergenic | 45.0% | |
GCATCTGTTCTGTACTTGGA+TGG | - | Chr7:94557272-94557291 | MsG0780041735.01.T01:intron | 45.0% | |
GCTACCAATGACAATTGGAC+AGG | - | Chr7:94557331-94557350 | MsG0780041735.01.T01:intron | 45.0% | |
GCTTGTGAAGACATTCGTCA+CGG | - | Chr7:94553954-94553973 | MsG0780041735.01.T01:CDS | 45.0% | |
GGGTGTGAATTATGTGAGGA+TGG | - | Chr7:94554236-94554255 | MsG0780041735.01.T01:CDS | 45.0% | |
GGTTGAAAAGTAGAGAGTGG+TGG | - | Chr7:94553248-94553267 | MsG0780041735.01.T01:three_prime_UTR | 45.0% | |
GTATCCTGGATAACGAAGAG+TGG | + | Chr7:94555648-94555667 | None:intergenic | 45.0% | |
GTATTCAGGTATGCGATCTG+TGG | - | Chr7:94556767-94556786 | MsG0780041735.01.T01:intron | 45.0% | |
GTGTTGGAATCAAAGAGGCA+AGG | + | Chr7:94555694-94555713 | None:intergenic | 45.0% | |
TCCAGAATTCCATACCGATC+TGG | + | Chr7:94553474-94553493 | None:intergenic | 45.0% | |
TCGCATACCTGAATACTAGC+AGG | + | Chr7:94556763-94556782 | None:intergenic | 45.0% | |
TGCTGCATCTGTTCTGTACT+TGG | - | Chr7:94557268-94557287 | MsG0780041735.01.T01:intron | 45.0% | |
TTATCCGACTAAGTGAGGTC+GGG | + | Chr7:94553873-94553892 | None:intergenic | 45.0% | |
TTCTTGTGTACTTGACTGGC+AGG | - | Chr7:94557857-94557876 | MsG0780041735.01.T01:CDS | 45.0% | |
TTTGTTGCTGATCATGGTGG+TGG | - | Chr7:94553786-94553805 | MsG0780041735.01.T01:CDS | 45.0% | |
! | ACTATTTTACCCATGCTCGC+TGG | - | Chr7:94553613-94553632 | MsG0780041735.01.T01:intron | 45.0% |
! | GAGAGGGTGTGAATTATGTG+AGG | - | Chr7:94554232-94554251 | MsG0780041735.01.T01:CDS | 45.0% |
! | GCCAGTACGATAAGTTGAGA+AGG | - | Chr7:94557155-94557174 | MsG0780041735.01.T01:intron | 45.0% |
!! | TGGTGGTGCTGGTAACAATT+GGG | - | Chr7:94553803-94553822 | MsG0780041735.01.T01:intron | 45.0% |
!!! | GGCATTTTTTAGGGTTTCGG+AGG | + | Chr7:94553412-94553431 | None:intergenic | 45.0% |
ACACGAAGAATGCTGGCAAG+TGG | - | Chr7:94558114-94558133 | MsG0780041735.01.T01:five_prime_UTR | 50.0% | |
ACTAAGTGAGGTCGGGTACA+TGG | + | Chr7:94553866-94553885 | None:intergenic | 50.0% | |
AGAGCGGAAATTGAACAGGG+GGG | - | Chr7:94555142-94555161 | MsG0780041735.01.T01:intron | 50.0% | |
AGATGGCAGTGACAGTCTTG+AGG | - | Chr7:94554934-94554953 | MsG0780041735.01.T01:intron | 50.0% | |
AGGATATACGCCTCTGACAG+TGG | - | Chr7:94555736-94555755 | MsG0780041735.01.T01:CDS | 50.0% | |
ATGCGGAAACCAGATCGGTA+TGG | - | Chr7:94553462-94553481 | MsG0780041735.01.T01:intron | 50.0% | |
CAAGAGGAGAAAGATCGGAG+AGG | + | Chr7:94554275-94554294 | None:intergenic | 50.0% | |
CAAGCACAACCCTAGAAGGA+AGG | + | Chr7:94557767-94557786 | None:intergenic | 50.0% | |
CATTCAATTGCTGGAGGGAC+AGG | - | Chr7:94554971-94554990 | MsG0780041735.01.T01:intron | 50.0% | |
CCACTGTGCTTGATGTCATG+AGG | - | Chr7:94555980-94555999 | MsG0780041735.01.T01:intron | 50.0% | |
CCTCATGACATCAAGCACAG+TGG | + | Chr7:94555983-94556002 | None:intergenic | 50.0% | |
CCTCGAAGATTTCGCTACTC+AGG | - | Chr7:94553534-94553553 | MsG0780041735.01.T01:intron | 50.0% | |
CCTGAGTAGCGAAATCTTCG+AGG | + | Chr7:94553537-94553556 | None:intergenic | 50.0% | |
GACTCTGGTGTCTGGTCTAT+TGG | - | Chr7:94554505-94554524 | MsG0780041735.01.T01:intron | 50.0% | |
GATGGCAGTGACAGTCTTGA+GGG | - | Chr7:94554935-94554954 | MsG0780041735.01.T01:intron | 50.0% | |
GGACAATGCGGAAACCAGAT+CGG | - | Chr7:94553457-94553476 | MsG0780041735.01.T01:three_prime_UTR | 50.0% | |
GGCGGTTGAAAAGTAGAGAG+TGG | - | Chr7:94553245-94553264 | MsG0780041735.01.T01:three_prime_UTR | 50.0% | |
GGTGACGAGCAATAAGGAAG+TGG | - | Chr7:94557878-94557897 | MsG0780041735.01.T01:CDS | 50.0% | |
GTTCAAACTGCACACAGGGT+AGG | - | Chr7:94556903-94556922 | MsG0780041735.01.T01:intron | 50.0% | |
GTTGAGCTCATTTGGTACCG+TGG | - | Chr7:94556288-94556307 | MsG0780041735.01.T01:intron | 50.0% | |
TATTCCTGTCGGACCATCTG+AGG | + | Chr7:94554644-94554663 | None:intergenic | 50.0% | |
TGTACCCGACCTCACTTAGT+CGG | - | Chr7:94553866-94553885 | MsG0780041735.01.T01:intron | 50.0% | |
TGTCATGAGGAGACTTCTGC+AGG | - | Chr7:94555993-94556012 | MsG0780041735.01.T01:intron | 50.0% | |
TGTTGAGAGAGAGAAGGGGA+TGG | + | Chr7:94553564-94553583 | None:intergenic | 50.0% | |
! | GAGGCAAAAGTATGCAGCTG+TGG | + | Chr7:94556811-94556830 | None:intergenic | 50.0% |
! | GCTGGTAACAATTGGGCTAG+TGG | - | Chr7:94553810-94553829 | MsG0780041735.01.T01:intron | 50.0% |
! | TTAGGTCAGCGGCCTTATGT+TGG | - | Chr7:94557090-94557109 | MsG0780041735.01.T01:intron | 50.0% |
!! | GTGGTGGTGCTGGTAACAAT+TGG | - | Chr7:94553802-94553821 | MsG0780041735.01.T01:CDS | 50.0% |
ACCTGACGTTCCACTGTCAG+AGG | + | Chr7:94555749-94555768 | None:intergenic | 55.0% | |
AGGAGAGGTTGACCCAACTC+AGG | - | Chr7:94556172-94556191 | MsG0780041735.01.T01:intron | 55.0% | |
AGTGAGGTCGGGTACATGGA+TGG | + | Chr7:94553862-94553881 | None:intergenic | 55.0% | |
CTGGCAGGTGACGAGCAATA+AGG | - | Chr7:94557872-94557891 | MsG0780041735.01.T01:CDS | 55.0% | |
GAGCGGAAATTGAACAGGGG+GGG | - | Chr7:94555143-94555162 | MsG0780041735.01.T01:intron | 55.0% | |
GAGTTGGGTCAACCTCTCCT+TGG | + | Chr7:94556172-94556191 | None:intergenic | 55.0% | |
GGCACAAGCACAACCCTAGA+AGG | + | Chr7:94557771-94557790 | None:intergenic | 55.0% | |
GTGGGGTCCTGCTAGTATTC+AGG | - | Chr7:94556753-94556772 | MsG0780041735.01.T01:intron | 55.0% | |
!! | TTGGGCTAGTGGCTACCATC+AGG | - | Chr7:94553821-94553840 | MsG0780041735.01.T01:intron | 55.0% |
AAGGCCTCAGATGGTCCGAC+AGG | - | Chr7:94554637-94554656 | MsG0780041735.01.T01:CDS | 60.0% | |
ATTGCTGGAGGGACAGGCTC+AGG | - | Chr7:94554977-94554996 | MsG0780041735.01.T01:intron | 60.0% | |
GCCTCTGACAGTGGAACGTC+AGG | - | Chr7:94555745-94555764 | MsG0780041735.01.T01:CDS | 60.0% | |
!! | GCTGATCATGGTGGTGGTGC+TGG | - | Chr7:94553792-94553811 | MsG0780041735.01.T01:CDS | 60.0% |
ACAGGAGAGGGCAGTGCTGC+AGG | - | Chr7:94557553-94557572 | MsG0780041735.01.T01:CDS | 65.0% | |
GGGCAGTGCTGCAGGATCAC+TGG | - | Chr7:94557561-94557580 | MsG0780041735.01.T01:CDS | 65.0% | |
TCCCTGCAGCCAGCGAGCAT+GGG | + | Chr7:94553625-94553644 | None:intergenic | 65.0% | |
! | ACCCATGCTCGCTGGCTGCA+GGG | - | Chr7:94553621-94553640 | MsG0780041735.01.T01:intron | 65.0% |
! | TACCCATGCTCGCTGGCTGC+AGG | - | Chr7:94553620-94553639 | MsG0780041735.01.T01:intron | 65.0% |
CTCCCTGCAGCCAGCGAGCA+TGG | + | Chr7:94553626-94553645 | None:intergenic | 70.0% | |
! | CATGCTCGCTGGCTGCAGGG+AGG | - | Chr7:94553624-94553643 | MsG0780041735.01.T01:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 94553203 | 94558153 | 94553203 | ID=MsG0780041735.01;Name=MsG0780041735.01 |
Chr7 | mRNA | 94553203 | 94558153 | 94553203 | ID=MsG0780041735.01.T01;Parent=MsG0780041735.01;Name=MsG0780041735.01.T01;_AED=0.49;_eAED=0.51;_QI=224|0.90|0.83|1|0.72|0.66|12|284|485 |
Chr7 | exon | 94553203 | 94553477 | 94553203 | ID=MsG0780041735.01.T01:exon:22621;Parent=MsG0780041735.01.T01 |
Chr7 | exon | 94553744 | 94553821 | 94553744 | ID=MsG0780041735.01.T01:exon:22620;Parent=MsG0780041735.01.T01 |
Chr7 | exon | 94553899 | 94554100 | 94553899 | ID=MsG0780041735.01.T01:exon:22619;Parent=MsG0780041735.01.T01 |
Chr7 | exon | 94554198 | 94554262 | 94554198 | ID=MsG0780041735.01.T01:exon:22618;Parent=MsG0780041735.01.T01 |
Chr7 | exon | 94554436 | 94554480 | 94554436 | ID=MsG0780041735.01.T01:exon:22617;Parent=MsG0780041735.01.T01 |
Chr7 | exon | 94554582 | 94554656 | 94554582 | ID=MsG0780041735.01.T01:exon:22616;Parent=MsG0780041735.01.T01 |
Chr7 | exon | 94555163 | 94555267 | 94555163 | ID=MsG0780041735.01.T01:exon:22615;Parent=MsG0780041735.01.T01 |
Chr7 | exon | 94555342 | 94555395 | 94555342 | ID=MsG0780041735.01.T01:exon:22614;Parent=MsG0780041735.01.T01 |
Chr7 | exon | 94555590 | 94555990 | 94555590 | ID=MsG0780041735.01.T01:exon:22613;Parent=MsG0780041735.01.T01 |
Chr7 | exon | 94556358 | 94556469 | 94556358 | ID=MsG0780041735.01.T01:exon:22612;Parent=MsG0780041735.01.T01 |
Chr7 | exon | 94557514 | 94557714 | 94557514 | ID=MsG0780041735.01.T01:exon:22611;Parent=MsG0780041735.01.T01 |
Chr7 | exon | 94557801 | 94558153 | 94557801 | ID=MsG0780041735.01.T01:exon:22610;Parent=MsG0780041735.01.T01 |
Chr7 | five_prime_UTR | 94557930 | 94558153 | 94557930 | ID=MsG0780041735.01.T01:five_prime_utr;Parent=MsG0780041735.01.T01 |
Chr7 | CDS | 94557801 | 94557929 | 94557801 | ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01 |
Chr7 | CDS | 94557514 | 94557714 | 94557514 | ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01 |
Chr7 | CDS | 94556358 | 94556469 | 94556358 | ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01 |
Chr7 | CDS | 94555590 | 94555990 | 94555590 | ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01 |
Chr7 | CDS | 94555342 | 94555395 | 94555342 | ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01 |
Chr7 | CDS | 94555163 | 94555267 | 94555163 | ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01 |
Chr7 | CDS | 94554582 | 94554656 | 94554582 | ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01 |
Chr7 | CDS | 94554436 | 94554480 | 94554436 | ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01 |
Chr7 | CDS | 94554198 | 94554262 | 94554198 | ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01 |
Chr7 | CDS | 94553899 | 94554100 | 94553899 | ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01 |
Chr7 | CDS | 94553753 | 94553821 | 94553753 | ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01 |
Chr7 | three_prime_UTR | 94553744 | 94553752 | 94553744 | ID=MsG0780041735.01.T01:three_prime_utr;Parent=MsG0780041735.01.T01 |
Chr7 | three_prime_UTR | 94553203 | 94553477 | 94553203 | ID=MsG0780041735.01.T01:three_prime_utr;Parent=MsG0780041735.01.T01 |
Gene Sequence |
Protein sequence |