AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041735.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041735.01.T01 MTR_7g117050 94.433 485 16 3 1 485 1 474 0.0 936
MsG0780041735.01.T01 MTR_4g017630 34.967 449 264 9 3 450 2 423 6.56e-83 263
MsG0780041735.01.T01 MTR_4g019110 34.076 449 268 9 3 450 2 423 4.51e-81 259
MsG0780041735.01.T01 MTR_1g101130 34.076 449 268 9 3 450 2 423 7.21e-81 258
MsG0780041735.01.T01 MTR_4g019090 34.076 449 268 9 3 450 2 423 7.69e-81 258
MsG0780041735.01.T01 MTR_2g031310 34.076 449 268 9 3 450 2 423 1.17e-80 258
MsG0780041735.01.T01 MTR_8g098360 33.185 449 272 7 3 450 2 423 1.41e-80 257
MsG0780041735.01.T01 MTR_3g113970 34.581 454 261 11 3 450 2 425 3.92e-80 256
MsG0780041735.01.T01 MTR_4g094535 34.076 449 268 9 3 450 2 423 4.07e-80 256
MsG0780041735.01.T01 MTR_7g089120 33.853 449 269 9 3 450 2 423 6.72e-79 253
MsG0780041735.01.T01 MTR_8g107250 33.556 450 270 9 3 450 2 424 7.82e-78 250
MsG0780041735.01.T01 MTR_7g085800 30.973 452 288 9 3 450 2 433 9.97e-66 219
MsG0780041735.01.T01 MTR_4g097830 30.197 457 285 10 3 450 2 433 2.73e-63 213
MsG0780041735.01.T01 MTR_8g085980 29.167 456 291 9 3 450 2 433 5.98e-63 211
MsG0780041735.01.T01 MTR_3g110720 30.197 457 285 10 3 450 2 433 6.54e-63 211
MsG0780041735.01.T01 MTR_1g106005 29.978 457 286 10 3 450 2 433 2.51e-62 210
MsG0780041735.01.T01 MTR_6g029190 30.044 456 286 9 3 449 2 433 4.39e-62 209
MsG0780041735.01.T01 MTR_2g041670 31.738 397 251 8 3 392 2 385 2.24e-50 179
MsG0780041735.01.T01 MTR_2g041400 31.313 396 252 8 3 391 2 384 3.66e-49 174
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041735.01.T01 AT3G61650 91.079 482 32 3 1 482 1 471 0.0 905
MsG0780041735.01.T01 AT5G05620 90.041 482 37 3 1 482 1 471 0.0 897
MsG0780041735.01.T01 AT5G44340 34.967 449 264 9 3 450 2 423 3.86e-83 264
MsG0780041735.01.T01 AT4G20890 34.521 449 266 9 3 450 2 423 3.20e-82 262
MsG0780041735.01.T01 AT5G23860 34.298 449 267 9 3 450 2 423 2.49e-81 259
MsG0780041735.01.T01 AT5G23860 34.298 449 267 9 3 450 2 423 2.49e-81 259
MsG0780041735.01.T01 AT2G29550 34.744 449 265 9 3 450 2 423 2.83e-81 259
MsG0780041735.01.T01 AT1G75780 34.889 450 264 10 3 450 2 424 1.58e-80 257
MsG0780041735.01.T01 AT5G62700 34.076 449 268 9 3 450 2 423 3.61e-80 256
MsG0780041735.01.T01 AT5G62690 34.076 449 268 9 3 450 2 423 3.61e-80 256
MsG0780041735.01.T01 AT1G20010 34.889 450 264 10 3 450 2 424 7.41e-80 256
MsG0780041735.01.T01 AT5G12250 34.076 449 268 9 3 450 2 423 1.92e-79 254
MsG0780041735.01.T01 AT1G64740 29.167 456 291 9 3 450 2 433 1.55e-63 213
MsG0780041735.01.T01 AT5G19780 29.386 456 290 9 3 450 2 433 4.83e-63 212
MsG0780041735.01.T01 AT5G19770 29.386 456 290 9 3 450 2 433 4.83e-63 212
MsG0780041735.01.T01 AT4G14960 29.978 457 286 10 3 450 2 433 1.28e-62 211
MsG0780041735.01.T01 AT1G04820 29.978 457 286 10 3 450 2 433 1.58e-62 210
MsG0780041735.01.T01 AT1G50010 29.978 457 286 10 3 450 2 433 1.58e-62 210
MsG0780041735.01.T01 AT4G14960 33.154 371 234 7 3 369 2 362 1.66e-59 202

Find 135 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTCATACTACTGATTT+TGG 0.178192 7:+94553748 None:intergenic
TTGGAACCAAGGGTTATTAA+TGG 0.245426 7:-94557617 MsG0780041735.01.T01:CDS
TTTAGCTTGGCTAGCATCTT+TGG 0.260486 7:+94555211 None:intergenic
AAGAGACATTATTGAGAGTT+TGG 0.287511 7:-94553952 MsG0780041735.01.T01:CDS
ATTCCCCATTTGATATAATC+TGG 0.291812 7:+94553903 None:intergenic
TGCTGCATCTGTTCTGTACT+TGG 0.297536 7:-94554066 MsG0780041735.01.T01:CDS
CCGTGCTTTATTGATTGATT+TGG 0.301583 7:-94557636 MsG0780041735.01.T01:CDS
GTTCTATGTCATTCAATTGC+TGG 0.305453 7:-94556372 MsG0780041735.01.T01:CDS
ACCAGATCGGTATGGAATTC+TGG 0.309683 7:-94557864 MsG0780041735.01.T01:CDS
TATATCCTGTCATTAGAAAA+TGG 0.320239 7:+94555613 None:intergenic
CAATATGGTTGGTTTGTTAT+TGG 0.325071 7:-94553309 MsG0780041735.01.T01:three_prime_UTR
TGTATTGTTTGTTTATCATT+TGG 0.325442 7:-94553361 MsG0780041735.01.T01:three_prime_UTR
GAGTTTGGTTGACGAATATA+AGG 0.328007 7:-94553937 MsG0780041735.01.T01:CDS
TCACTTGTCTCCATTTGGTT+AGG 0.344251 7:+94555894 None:intergenic
CCACATCACTTGTCTCCATT+TGG 0.361567 7:+94555889 None:intergenic
GTGGGGTCCTGCTAGTATTC+AGG 0.370913 7:-94554581 MsG0780041735.01.T01:intron
ACAGAATACCACTGTCAATA+TGG 0.372776 7:-94553324 MsG0780041735.01.T01:three_prime_UTR
TCTCATGATTGTAAAGATTA+CGG 0.376121 7:+94557576 None:intergenic
GTGGTGGTGCTGGTAACAAT+TGG 0.384508 7:-94557532 MsG0780041735.01.T01:CDS
GGTCATTCAGAGTCTCTAAA+AGG 0.387096 7:+94555955 None:intergenic
AATATTGTCATTACCTGAGT+TGG 0.398405 7:+94555149 None:intergenic
AATCCCCAGATTATATCAAA+TGG 0.399374 7:-94553908 MsG0780041735.01.T01:CDS
CTGTGTGCAGTTTGAACATA+TGG 0.400407 7:+94554437 None:intergenic
AAGAAAAGCAGAGTGCAATT+TGG 0.403095 7:-94558110 MsG0780041735.01.T01:five_prime_UTR
CACTAACAATAGAATAGAAA+TGG 0.404089 7:+94557971 None:intergenic
GAATGTTGAAGAAGACATAA+TGG 0.419103 7:-94556442 MsG0780041735.01.T01:CDS
TCTCCTGTCATCATATTATT+CGG 0.421502 7:+94553796 None:intergenic
CTGGCAGGTGACGAGCAATA+AGG 0.421976 7:-94553462 MsG0780041735.01.T01:intron
ACAGGAGAGGGCAGTGCTGC+AGG 0.426001 7:-94553781 MsG0780041735.01.T01:CDS
CTGGCAGGCAAAGAATATTA+TGG 0.438413 7:-94555252 MsG0780041735.01.T01:intron
CACTTGTCTCCATTTGGTTA+GGG 0.438949 7:+94555895 None:intergenic
CATTCAATTGCTGGAGGGAC+AGG 0.443706 7:-94556363 MsG0780041735.01.T01:CDS
CTGATGCTACCAATGACAAT+TGG 0.448469 7:-94554008 MsG0780041735.01.T01:CDS
TCCAGAATTCCATACCGATC+TGG 0.449492 7:+94557863 None:intergenic
ATTGCTGGAGGGACAGGCTC+AGG 0.449849 7:-94556357 MsG0780041735.01.T01:intron
GCCTCTGACAGTGGAACGTC+AGG 0.450901 7:-94555589 MsG0780041735.01.T01:intron
GAATTTGTTTGAGCAAATGT+TGG 0.452915 7:+94555744 None:intergenic
ATCCCCAGATTATATCAAAT+GGG 0.456784 7:-94553907 MsG0780041735.01.T01:CDS
TTATCCTGTCCAATTGTCAT+TGG 0.458417 7:+94553999 None:intergenic
GCTGATCATGGTGGTGGTGC+TGG 0.458497 7:-94557542 MsG0780041735.01.T01:CDS
GGGCAGTGCTGCAGGATCAC+TGG 0.459086 7:-94553773 MsG0780041735.01.T01:CDS
TGAATTCCATTAATAACCCT+TGG 0.461984 7:+94557611 None:intergenic
GGCTCAGACATTTACTGAAA+AGG 0.462594 7:+94554199 None:intergenic
GATATAATCTGGGGATTCAC+AGG 0.462754 7:+94553914 None:intergenic
CAGACATCACAGTAGAAACT+AGG 0.469353 7:+94555721 None:intergenic
GTCATTAGAAAATGGCATCT+TGG 0.471437 7:+94555621 None:intergenic
CAGTGTGTTCCCTAACCAAA+TGG 0.473529 7:-94555904 MsG0780041735.01.T01:CDS
TTCCCCATTTGATATAATCT+GGG 0.474962 7:+94553904 None:intergenic
AAGTCATTATTCATGTATCC+TGG 0.481660 7:+94555675 None:intergenic
GCTAGTTAACTTTATTGAGT+GGG 0.483561 7:-94554599 MsG0780041735.01.T01:CDS
ATATTGTCATTACCTGAGTT+GGG 0.490303 7:+94555150 None:intergenic
AGAAAATGGCATCTTGGTGT+TGG 0.491952 7:+94555627 None:intergenic
CCTGAGTAGCGAAATCTTCG+AGG 0.493935 7:+94557800 None:intergenic
AGAATTTCTTTGTTTAGTAG+TGG 0.496021 7:+94558006 None:intergenic
CAAATCAATCAATAAAGCAC+GGG 0.496031 7:+94557637 None:intergenic
AGTGTCAAAAGTGAGTTATA+TGG 0.497975 7:+94555858 None:intergenic
CCTCGAAGATTTCGCTACTC+AGG 0.506650 7:-94557800 MsG0780041735.01.T01:intron
GAGTTGGGTCAACCTCTCCT+TGG 0.508239 7:+94555165 None:intergenic
TTAGGTCAGCGGCCTTATGT+TGG 0.508961 7:-94554244 MsG0780041735.01.T01:intron
GATGGCAGTGACAGTCTTGA+GGG 0.509882 7:-94556399 MsG0780041735.01.T01:CDS
TTGGGCTAGTGGCTACCATC+AGG 0.512567 7:-94557513 MsG0780041735.01.T01:intron
GAATTGATATATATTTAGCT+TGG 0.513871 7:+94555198 None:intergenic
TCTTAATGCTGATTGTGTTG+TGG 0.515975 7:-94555823 MsG0780041735.01.T01:CDS
ATTGATTGATTTGGAACCAA+GGG 0.524085 7:-94557627 MsG0780041735.01.T01:CDS
TAGTATGACTAGCCAACATA+AGG 0.524461 7:+94554232 None:intergenic
ACAACCACTCTTCGTTATCC+AGG 0.524939 7:-94555693 MsG0780041735.01.T01:CDS
GATCCGAATAATATGATGAC+AGG 0.524991 7:-94553799 MsG0780041735.01.T01:CDS
TTTGTTGCTGATCATGGTGG+TGG 0.525133 7:-94557548 MsG0780041735.01.T01:CDS
AGGATATACGCCTCTGACAG+TGG 0.526564 7:-94555598 MsG0780041735.01.T01:CDS
ACTATTGACACGAAGAATGC+TGG 0.527775 7:-94553227 MsG0780041735.01.T01:three_prime_UTR
TGGTGGTGCTGGTAACAATT+GGG 0.531520 7:-94557531 MsG0780041735.01.T01:CDS
AAAAGCAGAGTGCAATTTGG+CGG 0.543842 7:-94558107 MsG0780041735.01.T01:five_prime_UTR
AGATTATATCAAATGGGGAA+TGG 0.549783 7:-94553901 MsG0780041735.01.T01:CDS
AGCTAGTTAACTTTATTGAG+TGG 0.551550 7:-94554600 MsG0780041735.01.T01:CDS
GCATCTGTTCTGTACTTGGA+TGG 0.552762 7:-94554062 MsG0780041735.01.T01:CDS
GGCGGTTGAAAAGTAGAGAG+TGG 0.555759 7:-94558089 MsG0780041735.01.T01:five_prime_UTR
AATACCACTGTCAATATGGT+TGG 0.559593 7:-94553320 MsG0780041735.01.T01:three_prime_UTR
AATAATATGATGACAGGAGA+GGG 0.566951 7:-94553793 MsG0780041735.01.T01:CDS
AGATGGCAGTGACAGTCTTG+AGG 0.567168 7:-94556400 MsG0780041735.01.T01:CDS
CTAGTTAACTTTATTGAGTG+GGG 0.569176 7:-94554598 MsG0780041735.01.T01:CDS
GCTACCAATGACAATTGGAC+AGG 0.570687 7:-94554003 MsG0780041735.01.T01:CDS
TGTCATGAGGAGACTTCTGC+AGG 0.571604 7:-94555341 MsG0780041735.01.T01:intron
ACCTGACGTTCCACTGTCAG+AGG 0.573775 7:+94555588 None:intergenic
AGAGATAATCACACTTCAAG+TGG 0.576431 7:-94557899 MsG0780041735.01.T01:CDS
ATGCGGAAACCAGATCGGTA+TGG 0.576564 7:-94557872 MsG0780041735.01.T01:CDS
CCAAATCAATCAATAAAGCA+CGG 0.577216 7:+94557636 None:intergenic
TTATGGTCTCTTCTTATGCA+CGG 0.578464 7:-94555235 MsG0780041735.01.T01:CDS
CTATGTCATTCAATTGCTGG+AGG 0.585953 7:-94556369 MsG0780041735.01.T01:CDS
TCCCCATTTGATATAATCTG+GGG 0.589500 7:+94553905 None:intergenic
TCGCATACCTGAATACTAGC+AGG 0.597022 7:+94554574 None:intergenic
GACAGTGGTATTCTGTACTA+CGG 0.597610 7:+94553331 None:intergenic
TGCACTTAATAGAATTGCTG+TGG 0.599504 7:-94555787 MsG0780041735.01.T01:CDS
GCTGGTAACAATTGGGCTAG+TGG 0.599621 7:-94557524 MsG0780041735.01.T01:CDS
GGTGACGAGCAATAAGGAAG+TGG 0.600143 7:-94553456 MsG0780041735.01.T01:three_prime_UTR
TTTGCTGTTTATTAGGTCAG+CGG 0.602175 7:-94554255 MsG0780041735.01.T01:intron
ATAACGAAGAGTGGTTGTGC+TGG 0.603190 7:+94555698 None:intergenic
AGGAGAGGTTGACCCAACTC+AGG 0.603351 7:-94555162 MsG0780041735.01.T01:intron
ATATGTTCAAACTGCACACA+GGG 0.604079 7:-94554435 MsG0780041735.01.T01:intron
TCAATTCTGAATATCATCCA+AGG 0.606426 7:-94555182 MsG0780041735.01.T01:CDS
AGACATCACAGTAGAAACTA+GGG 0.607333 7:+94555722 None:intergenic
GACATTTACTGAAAAGGTGA+CGG 0.609104 7:+94554205 None:intergenic
TATTGATTGATTTGGAACCA+AGG 0.610327 7:-94557628 MsG0780041735.01.T01:CDS
TCAAAAGTGAGTTATATGGT+TGG 0.610753 7:+94555862 None:intergenic
GAACATGGTATCAGCAAAGA+CGG 0.611540 7:-94557826 MsG0780041735.01.T01:CDS
GGACAATGCGGAAACCAGAT+CGG 0.618984 7:-94557877 MsG0780041735.01.T01:CDS
GAGATAATCACACTTCAAGT+GGG 0.619478 7:-94557898 MsG0780041735.01.T01:CDS
AGGATACATGAATAATGACT+TGG 0.619688 7:-94555673 MsG0780041735.01.T01:CDS
AAACAACTCTGTCTCGAACA+TGG 0.619782 7:-94557841 MsG0780041735.01.T01:CDS
ATGATTGACAGAGAAGCAGA+TGG 0.626844 7:-94556417 MsG0780041735.01.T01:CDS
TACATGAATAATGACTTGGT+TGG 0.628614 7:-94555669 MsG0780041735.01.T01:CDS
CATATGTTCAAACTGCACAC+AGG 0.630458 7:-94554436 MsG0780041735.01.T01:CDS
GTGTTGGAATCAAAGAGGCA+AGG 0.634632 7:+94555643 None:intergenic
TCCCCAGATTATATCAAATG+GGG 0.635043 7:-94553906 MsG0780041735.01.T01:CDS
TTATATCAAATGGGGAATGG+AGG 0.637675 7:-94553898 MsG0780041735.01.T01:intron
TGTGTGCAGTTTGAACATAT+GGG 0.640655 7:+94554438 None:intergenic
AGGTTCATGAAAGTTTGCAG+AGG 0.643924 7:-94554636 MsG0780041735.01.T01:CDS
GTGTGCAGTTTGAACATATG+GGG 0.646116 7:+94554439 None:intergenic
TATGTCATTCAATTGCTGGA+GGG 0.647449 7:-94556368 MsG0780041735.01.T01:CDS
TCTGAATATCATCCAAGGAG+AGG 0.649229 7:-94555177 MsG0780041735.01.T01:CDS
TTGATTCATCAAACTCTGAG+AGG 0.650287 7:+94553973 None:intergenic
TGAAGTGTGATTATCTCTCG+AGG 0.657196 7:+94557904 None:intergenic
AAGAATGTTCAAAAGGTGTG+TGG 0.660389 7:+94553192 None:intergenic
GAATAATATGATGACAGGAG+AGG 0.675044 7:-94553794 MsG0780041735.01.T01:CDS
TCTTGGTGTTGGAATCAAAG+AGG 0.676873 7:+94555638 None:intergenic
ACACGAAGAATGCTGGCAAG+TGG 0.679689 7:-94553220 MsG0780041735.01.T01:three_prime_UTR
GGTTGAAAAGTAGAGAGTGG+TGG 0.684934 7:-94558086 MsG0780041735.01.T01:five_prime_UTR
GTATCCTGGATAACGAAGAG+TGG 0.693788 7:+94555689 None:intergenic
CCACTGTGCTTGATGTCATG+AGG 0.693936 7:-94555354 MsG0780041735.01.T01:CDS
AAATCAATCAATAAAGCACG+GGG 0.701160 7:+94557638 None:intergenic
ACACTTCAAGTGGGACAATG+CGG 0.701458 7:-94557889 MsG0780041735.01.T01:CDS
CAAACCAACCATATTGACAG+TGG 0.705654 7:+94553316 None:intergenic
AATGGAGACAAGTGATGTGG+TGG 0.707586 7:-94555886 MsG0780041735.01.T01:CDS
CCAAATGGAGACAAGTGATG+TGG 0.730166 7:-94555889 MsG0780041735.01.T01:CDS
CCTCATGACATCAAGCACAG+TGG 0.730325 7:+94555354 None:intergenic
AGTGGTATTCTGTACTACGG+CGG 0.752433 7:+94553334 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATAAATAAAATTGCA+AGG + Chr7:94554610-94554629 None:intergenic 10.0%
!! TATAATAAATAAAATTGCAA+GGG + Chr7:94554609-94554628 None:intergenic 10.0%
!! TATTTATTATATAACTAGAA+AGG - Chr7:94554618-94554637 MsG0780041735.01.T01:CDS 10.0%
!!! AAATAATTTTAAAAAAACAG+AGG + Chr7:94555298-94555317 None:intergenic 10.0%
!!! ATAGTTTAACATATATTTTT+AGG - Chr7:94557003-94557022 MsG0780041735.01.T01:intron 10.0%
!!! ATATTTTTTTAGATATTTGT+TGG + Chr7:94558070-94558089 None:intergenic 10.0%
!!! TATTTTTTTAGATATTTGTT+GGG + Chr7:94558069-94558088 None:intergenic 10.0%
!!! TTTATATTTTTTCTTTGTAT+AGG - Chr7:94557513-94557532 MsG0780041735.01.T01:intron 10.0%
!! AAATTCTCAATAAAGTTAAA+GGG + Chr7:94555066-94555085 None:intergenic 15.0%
!! TCTAATAATAATATCTTACT+TGG + Chr7:94557612-94557631 None:intergenic 15.0%
!! TGAAAATATTGATATGAAAT+TGG + Chr7:94557235-94557254 None:intergenic 15.0%
!! TTGTAGAATATTTAATAACT+TGG + Chr7:94554089-94554108 None:intergenic 15.0%
!!! AGATTAATTTCAATTTTTCA+AGG + Chr7:94556509-94556528 None:intergenic 15.0%
!!! ATTATGAAAACTTTCTTTTT+TGG - Chr7:94557917-94557936 MsG0780041735.01.T01:exon 15.0%
!!! ATTTTTTATTTATCTTGCTA+GGG + Chr7:94557682-94557701 None:intergenic 15.0%
!!! TCAACTATTTTAAAATGTAA+GGG - Chr7:94554771-94554790 MsG0780041735.01.T01:intron 15.0%
!!! TTAACATATATTTTTAGGAA+TGG - Chr7:94557008-94557027 MsG0780041735.01.T01:intron 15.0%
!!! TTAGTGTTATTTTTTCAAAA+AGG - Chr7:94553380-94553399 MsG0780041735.01.T01:three_prime_UTR 15.0%
!! AATCATAATACAGTTTAGAA+AGG + Chr7:94556658-94556677 None:intergenic 20.0%
!! AATTCTCAATAAAGTTAAAG+GGG + Chr7:94555065-94555084 None:intergenic 20.0%
!! ATCATAATACAGTTTAGAAA+GGG + Chr7:94556657-94556676 None:intergenic 20.0%
!! CAAATTCTCAATAAAGTTAA+AGG + Chr7:94555067-94555086 None:intergenic 20.0%
!! GAATTGATATATATTTAGCT+TGG + Chr7:94556139-94556158 None:intergenic 20.0%
!! GATAAGCATAAAAATAAAGA+CGG + Chr7:94556949-94556968 None:intergenic 20.0%
!! TCTTCTATTAAAAAATACCA+CGG + Chr7:94556308-94556327 None:intergenic 20.0%
!! TGTATTGTTTGTTTATCATT+TGG - Chr7:94557973-94557992 MsG0780041735.01.T01:five_prime_UTR 20.0%
!!! CATTTTTTATTTATCTTGCT+AGG + Chr7:94557683-94557702 None:intergenic 20.0%
!!! GTCAACTATTTTAAAATGTA+AGG - Chr7:94554770-94554789 MsG0780041735.01.T01:intron 20.0%
!!! TATGATTTTAATGTTCTCTA+TGG - Chr7:94556671-94556690 MsG0780041735.01.T01:intron 20.0%
!!! TGGTATTTTTTAATAGAAGA+TGG - Chr7:94556308-94556327 MsG0780041735.01.T01:intron 20.0%
!!! TTTTTTATTTATCTTGCTAG+GGG + Chr7:94557681-94557700 None:intergenic 20.0%
! AAACAAAAAAATGAAAAGCG+AGG + Chr7:94557476-94557495 None:intergenic 25.0%
! AAATAAAGAAGGAAATCAAG+AGG + Chr7:94554291-94554310 None:intergenic 25.0%
! ACAAGAATCTTAGACATTTA+TGG + Chr7:94557844-94557863 None:intergenic 25.0%
! AGGTTATCCATCTTAAATAT+AGG + Chr7:94555253-94555272 None:intergenic 25.0%
! ATGAAAAACATAAAGGTTGA+AGG - Chr7:94554572-94554591 MsG0780041735.01.T01:intron 25.0%
! ATTAATTTCCAGCAAATTGT+CGG + Chr7:94555112-94555131 None:intergenic 25.0%
! ATTATTATTAGACCATAAGC+AGG - Chr7:94557620-94557639 MsG0780041735.01.T01:CDS 25.0%
! ATTCTCAATAAAGTTAAAGG+GGG + Chr7:94555064-94555083 None:intergenic 25.0%
! CACTAACAATAGAATAGAAA+TGG + Chr7:94553366-94553385 None:intergenic 25.0%
! CATCAAACTAAATATGAAAG+AGG + Chr7:94556830-94556849 None:intergenic 25.0%
! GTGAGAAATATTTAAGCAAT+CGG + Chr7:94555276-94555295 None:intergenic 25.0%
! TACGGAGGAAATATAAAATA+GGG + Chr7:94555914-94555933 None:intergenic 25.0%
! TATATCCTGTCATTAGAAAA+TGG + Chr7:94555724-94555743 None:intergenic 25.0%
! TCTCATGATTGTAAAGATTA+CGG + Chr7:94553761-94553780 None:intergenic 25.0%
! TCTTAAATATAGGAAGTCAA+AGG + Chr7:94555243-94555262 None:intergenic 25.0%
! TCTTTACAGGACAAAAATTT+AGG + Chr7:94555827-94555846 None:intergenic 25.0%
! TGAAAAACATAAAGGTTGAA+GGG - Chr7:94554573-94554592 MsG0780041735.01.T01:intron 25.0%
! TGAAATATGAACGTTAAATG+TGG - Chr7:94557701-94557720 MsG0780041735.01.T01:intron 25.0%
! TGAAATTAATCTTCAACTGA+TGG - Chr7:94556517-94556536 MsG0780041735.01.T01:intron 25.0%
! TTAATGTTCTCTATGGATTT+AGG - Chr7:94556678-94556697 MsG0780041735.01.T01:intron 25.0%
! TTACGGAGGAAATATAAAAT+AGG + Chr7:94555915-94555934 None:intergenic 25.0%
! TTGACTTCCTATATTTAAGA+TGG - Chr7:94555243-94555262 MsG0780041735.01.T01:CDS 25.0%
!! AGAATTTCTTTGTTTAGTAG+TGG + Chr7:94553331-94553350 None:intergenic 25.0%
!!! AAATTGCTTTTAACGCATAA+TGG - Chr7:94555193-94555212 MsG0780041735.01.T01:CDS 25.0%
!!! AATATTTTTGTTGCTGATCA+TGG - Chr7:94553780-94553799 MsG0780041735.01.T01:CDS 25.0%
!!! TGAAAACTTTCTTTTTTGGA+TGG - Chr7:94557921-94557940 MsG0780041735.01.T01:exon 25.0%
!!! TGCTCGAAATATCATTTTTA+TGG + Chr7:94555793-94555812 None:intergenic 25.0%
!!! TTTCTTCATACTACTGATTT+TGG + Chr7:94557589-94557608 None:intergenic 25.0%
AAAAACTACCGTATTATGGA+AGG + Chr7:94554674-94554693 None:intergenic 30.0%
AAATCAATCAATAAAGCACG+GGG + Chr7:94553699-94553718 None:intergenic 30.0%
AAATGAGCTCAACAAATGAA+TGG + Chr7:94556281-94556300 None:intergenic 30.0%
AACTGAAACTGAGTTACAAA+AGG - Chr7:94556248-94556267 MsG0780041735.01.T01:intron 30.0%
AAGAGACATTATTGAGAGTT+TGG - Chr7:94557382-94557401 MsG0780041735.01.T01:intron 30.0%
AAGTCATTATTCATGTATCC+TGG + Chr7:94555662-94555681 None:intergenic 30.0%
AATAATATGATGACAGGAGA+GGG - Chr7:94557541-94557560 MsG0780041735.01.T01:CDS 30.0%
AATATCATCCGATCAGATTA+CGG + Chr7:94555932-94555951 None:intergenic 30.0%
AATATTGTCATTACCTGAGT+TGG + Chr7:94556188-94556207 None:intergenic 30.0%
AATCCCCAGATTATATCAAA+TGG - Chr7:94557426-94557445 MsG0780041735.01.T01:intron 30.0%
ACGGAGGAAATATAAAATAG+GGG + Chr7:94555913-94555932 None:intergenic 30.0%
ACTAGAGACTGAATACATAA+AGG + Chr7:94554324-94554343 None:intergenic 30.0%
ACTCAGTTTCAGTTAACAAA+TGG + Chr7:94556242-94556261 None:intergenic 30.0%
AGAAATATTTAAGCAATCGG+AGG + Chr7:94555273-94555292 None:intergenic 30.0%
AGAAGGAATAGAAATTAGAG+AGG - Chr7:94554215-94554234 MsG0780041735.01.T01:CDS 30.0%
AGATTATATCAAATGGGGAA+TGG - Chr7:94557433-94557452 MsG0780041735.01.T01:intron 30.0%
AGCTAGTTAACTTTATTGAG+TGG - Chr7:94556734-94556753 MsG0780041735.01.T01:intron 30.0%
AGGATACATGAATAATGACT+TGG - Chr7:94555661-94555680 MsG0780041735.01.T01:CDS 30.0%
AGTGTCAAAAGTGAGTTATA+TGG + Chr7:94555479-94555498 None:intergenic 30.0%
ATATTGTCATTACCTGAGTT+GGG + Chr7:94556187-94556206 None:intergenic 30.0%
ATCCCCAGATTATATCAAAT+GGG - Chr7:94557427-94557446 MsG0780041735.01.T01:intron 30.0%
ATGTGACGTTAATTAGAAGA+AGG + Chr7:94556438-94556457 None:intergenic 30.0%
ATTAAAGTAAGCATACCTGA+TGG + Chr7:94553839-94553858 None:intergenic 30.0%
ATTAATCTTACACTCAAGAG+CGG - Chr7:94555126-94555145 MsG0780041735.01.T01:intron 30.0%
ATTCCCCATTTGATATAATC+TGG + Chr7:94557434-94557453 None:intergenic 30.0%
CAAAACAACAGAATCTTTAC+AGG + Chr7:94555840-94555859 None:intergenic 30.0%
CAAATCAATCAATAAAGCAC+GGG + Chr7:94553700-94553719 None:intergenic 30.0%
CATCTAAAAAACACAAAACC+AGG + Chr7:94554705-94554724 None:intergenic 30.0%
CCAAATCAATCAATAAAGCA+CGG + Chr7:94553701-94553720 None:intergenic 30.0%
CTAGTTAACTTTATTGAGTG+GGG - Chr7:94556736-94556755 MsG0780041735.01.T01:intron 30.0%
GAAACTTATATGATGTCCTA+AGG + Chr7:94555033-94555052 None:intergenic 30.0%
GAAGGAATAGAAATTAGAGA+GGG - Chr7:94554216-94554235 MsG0780041735.01.T01:CDS 30.0%
GAATGTTGAAGAAGACATAA+TGG - Chr7:94554892-94554911 MsG0780041735.01.T01:intron 30.0%
GAGAACTGGAAAAATAAAGA+AGG + Chr7:94554302-94554321 None:intergenic 30.0%
GCTAGTTAACTTTATTGAGT+GGG - Chr7:94556735-94556754 MsG0780041735.01.T01:intron 30.0%
GCTTCACATGAAAAACATAA+AGG - Chr7:94554565-94554584 MsG0780041735.01.T01:intron 30.0%
GTACAAAAACTACCGTATTA+TGG + Chr7:94554678-94554697 None:intergenic 30.0%
GTTATTCCATTCATTTATGC+AGG - Chr7:94555344-94555363 MsG0780041735.01.T01:CDS 30.0%
TAGGAATGGTTATTATTCTG+AGG - Chr7:94557022-94557041 MsG0780041735.01.T01:intron 30.0%
TCAAAAGTGAGTTATATGGT+TGG + Chr7:94555475-94555494 None:intergenic 30.0%
TCAAATTCAATCAATGACTC+TGG - Chr7:94554490-94554509 MsG0780041735.01.T01:intron 30.0%
TCAATTCTGAATATCATCCA+AGG - Chr7:94556152-94556171 MsG0780041735.01.T01:intron 30.0%
TCAGCAAAATTAGTAGTGAA+TGG - Chr7:94554119-94554138 MsG0780041735.01.T01:intron 30.0%
TCGTCAACATTACATTCAAA+TGG + Chr7:94557792-94557811 None:intergenic 30.0%
TCTCCTGTCATCATATTATT+CGG + Chr7:94557541-94557560 None:intergenic 30.0%
TGAATTCCATTAATAACCCT+TGG + Chr7:94553726-94553745 None:intergenic 30.0%
TGGTTGTTAATATCTGATCA+GGG - Chr7:94554866-94554885 MsG0780041735.01.T01:intron 30.0%
TTATGGAGAAAATGACACAA+AGG + Chr7:94555776-94555795 None:intergenic 30.0%
TTCCCCATTTGATATAATCT+GGG + Chr7:94557433-94557452 None:intergenic 30.0%
! AGTGTCTTTTGCTTGTAAAT+TGG - Chr7:94554341-94554360 MsG0780041735.01.T01:intron 30.0%
! ATTAGTTTACCTTCCTTCTA+GGG - Chr7:94557755-94557774 MsG0780041735.01.T01:intron 30.0%
! ATTCATTTGTTGAGCTCATT+TGG - Chr7:94556280-94556299 MsG0780041735.01.T01:intron 30.0%
! GAATTTGTTTGAGCAAATGT+TGG + Chr7:94555593-94555612 None:intergenic 30.0%
! GATTTTCTTTAGCATGCTAA+TGG - Chr7:94554040-94554059 MsG0780041735.01.T01:CDS 30.0%
! TGAGTGATGAGTTACATTTT+TGG - Chr7:94554818-94554837 MsG0780041735.01.T01:intron 30.0%
! TTTTTCCTAGTATTTGCCTT+AGG - Chr7:94555014-94555033 MsG0780041735.01.T01:intron 30.0%
!! AATGGTTATTATTCTGAGGT+TGG - Chr7:94557026-94557045 MsG0780041735.01.T01:intron 30.0%
!! ACAATCTTATCTTGCTTTTC+TGG - Chr7:94556850-94556869 MsG0780041735.01.T01:intron 30.0%
!! ATTGATTGATTTGGAACCAA+GGG - Chr7:94553707-94553726 MsG0780041735.01.T01:intron 30.0%
!! CAATATGGTTGGTTTGTTAT+TGG - Chr7:94558025-94558044 MsG0780041735.01.T01:five_prime_UTR 30.0%
!! TACATGAATAATGACTTGGT+TGG - Chr7:94555665-94555684 MsG0780041735.01.T01:CDS 30.0%
!! TATTGATTGATTTGGAACCA+AGG - Chr7:94553706-94553725 MsG0780041735.01.T01:intron 30.0%
!!! ATTCTGTTGTTTTGTTGAAC+TGG - Chr7:94555846-94555865 MsG0780041735.01.T01:CDS 30.0%
!!! ATTTCTTTTTCAGCTTCTAC+TGG - Chr7:94556389-94556408 MsG0780041735.01.T01:CDS 30.0%
!!! TGGCTCATTTTGAGTTAAAA+AGG + Chr7:94557824-94557843 None:intergenic 30.0%
!!! TTTCTTTTTTGGATGGTTTG+CGG - Chr7:94557928-94557947 MsG0780041735.01.T01:exon 30.0%
AACGCATAATGGCTAAGAAT+TGG - Chr7:94555204-94555223 MsG0780041735.01.T01:CDS 35.0%
AAGAAAAGCAGAGTGCAATT+TGG - Chr7:94553224-94553243 MsG0780041735.01.T01:three_prime_UTR 35.0%
AAGATTCTTGTGTACTTGAC+TGG - Chr7:94557853-94557872 MsG0780041735.01.T01:CDS 35.0%
AAGGGAAGGAATATGTGTAA+GGG - Chr7:94554179-94554198 MsG0780041735.01.T01:intron 35.0%
AATACCACTGTCAATATGGT+TGG - Chr7:94558014-94558033 MsG0780041735.01.T01:five_prime_UTR 35.0%
ACAGAATACCACTGTCAATA+TGG - Chr7:94558010-94558029 MsG0780041735.01.T01:five_prime_UTR 35.0%
ACGCATAATGGCTAAGAATT+GGG - Chr7:94555205-94555224 MsG0780041735.01.T01:CDS 35.0%
AGACATCACAGTAGAAACTA+GGG + Chr7:94555615-94555634 None:intergenic 35.0%
AGAGATAATCACACTTCAAG+TGG - Chr7:94553435-94553454 MsG0780041735.01.T01:three_prime_UTR 35.0%
AGTCACAATTCCTGTAATCA+AGG - Chr7:94554160-94554179 MsG0780041735.01.T01:intron 35.0%
AGTCAGTGTATAAACTAAGG+AGG + Chr7:94554375-94554394 None:intergenic 35.0%
ATAGTTGACTAAGACTCCTA+TGG + Chr7:94554759-94554778 None:intergenic 35.0%
ATATGTTCAAACTGCACACA+GGG - Chr7:94556899-94556918 MsG0780041735.01.T01:intron 35.0%
ATATTCCTTCCCTTGATTAC+AGG + Chr7:94554173-94554192 None:intergenic 35.0%
ATCCTGATAGATCATTCCAT+AGG - Chr7:94554740-94554759 MsG0780041735.01.T01:intron 35.0%
ATCGTCAACCTTCCATAATA+CGG - Chr7:94554663-94554682 MsG0780041735.01.T01:intron 35.0%
CAATCAGATGTAATGCAGAA+AGG + Chr7:94556975-94556994 None:intergenic 35.0%
CCATTCATTTATGCAGGTAT+GGG - Chr7:94555350-94555369 MsG0780041735.01.T01:CDS 35.0%
CGGAGGAAATATAAAATAGG+GGG + Chr7:94555912-94555931 None:intergenic 35.0%
CTCTATTGACATTAAGTTCC+TGG - Chr7:94556063-94556082 MsG0780041735.01.T01:intron 35.0%
CTGAATACATAAAGGAGAAC+TGG + Chr7:94554316-94554335 None:intergenic 35.0%
GAAATCAAGAGGAGAAAGAT+CGG + Chr7:94554280-94554299 None:intergenic 35.0%
GAACACTTACAGCAAACATT+GGG + Chr7:94557213-94557232 None:intergenic 35.0%
GAATAATATGATGACAGGAG+AGG - Chr7:94557540-94557559 MsG0780041735.01.T01:CDS 35.0%
GACATTTACTGAAAAGGTGA+CGG + Chr7:94557132-94557151 None:intergenic 35.0%
GACTTGAGTATAAGATTGCT+TGG + Chr7:94556482-94556501 None:intergenic 35.0%
GAGATAATCACACTTCAAGT+GGG - Chr7:94553436-94553455 MsG0780041735.01.T01:three_prime_UTR 35.0%
GAGTTTGGTTGACGAATATA+AGG - Chr7:94557397-94557416 MsG0780041735.01.T01:intron 35.0%
GATCCGAATAATATGATGAC+AGG - Chr7:94557535-94557554 MsG0780041735.01.T01:CDS 35.0%
GGAGGAAATATAAAATAGGG+GGG + Chr7:94555911-94555930 None:intergenic 35.0%
GGCAATTTACAACATAAGTC+TGG - Chr7:94554011-94554030 MsG0780041735.01.T01:CDS 35.0%
GTCACAATTCCTGTAATCAA+GGG - Chr7:94554161-94554180 MsG0780041735.01.T01:intron 35.0%
GTCATTAGAAAATGGCATCT+TGG + Chr7:94555716-94555735 None:intergenic 35.0%
GTGGTTGTTAATATCTGATC+AGG - Chr7:94554865-94554884 MsG0780041735.01.T01:intron 35.0%
GTTCTATGTCATTCAATTGC+TGG - Chr7:94554962-94554981 MsG0780041735.01.T01:intron 35.0%
TAATAAACAGCAAAGCACAC+AGG + Chr7:94557073-94557092 None:intergenic 35.0%
TAATCTTCAACTGATGGTTG+TGG - Chr7:94556523-94556542 MsG0780041735.01.T01:intron 35.0%
TATGTCATTCAATTGCTGGA+GGG - Chr7:94554966-94554985 MsG0780041735.01.T01:intron 35.0%
TATTTCCTCCGTAATCTGAT+CGG - Chr7:94555921-94555940 MsG0780041735.01.T01:CDS 35.0%
TCAGATATTAACAACCACAC+AGG + Chr7:94554863-94554882 None:intergenic 35.0%
TCCATTCATTTATGCAGGTA+TGG - Chr7:94555349-94555368 MsG0780041735.01.T01:CDS 35.0%
TCCCCAGATTATATCAAATG+GGG - Chr7:94557428-94557447 MsG0780041735.01.T01:intron 35.0%
TCCCCATTTGATATAATCTG+GGG + Chr7:94557432-94557451 None:intergenic 35.0%
TCCTTAGTTTATACACTGAC+TGG - Chr7:94554374-94554393 MsG0780041735.01.T01:intron 35.0%
TGCACTTAATAGAATTGCTG+TGG - Chr7:94555547-94555566 MsG0780041735.01.T01:intron 35.0%
TGCATTACATCTGATTGCAT+TGG - Chr7:94556978-94556997 MsG0780041735.01.T01:intron 35.0%
TGTGTGCAGTTTGAACATAT+GGG + Chr7:94556899-94556918 None:intergenic 35.0%
TTAGTAGTGAATGGACAGAT+AGG - Chr7:94554128-94554147 MsG0780041735.01.T01:intron 35.0%
TTATATCAAATGGGGAATGG+AGG - Chr7:94557436-94557455 MsG0780041735.01.T01:intron 35.0%
TTATCCTGTCCAATTGTCAT+TGG + Chr7:94557338-94557357 None:intergenic 35.0%
TTATGGTCTCTTCTTATGCA+CGG - Chr7:94556099-94556118 MsG0780041735.01.T01:intron 35.0%
TTGATTCATCAAACTCTGAG+AGG + Chr7:94557364-94557383 None:intergenic 35.0%
TTGGAACCAAGGGTTATTAA+TGG - Chr7:94553717-94553736 MsG0780041735.01.T01:intron 35.0%
! ATTTTTGTTGCTGATCATGG+TGG - Chr7:94553783-94553802 MsG0780041735.01.T01:CDS 35.0%
! CATTAGTTTACCTTCCTTCT+AGG - Chr7:94557754-94557773 MsG0780041735.01.T01:intron 35.0%
! CCGTGCTTTATTGATTGATT+TGG - Chr7:94553698-94553717 MsG0780041735.01.T01:intron 35.0%
! CCTTAGTTTATACACTGACT+GGG - Chr7:94554375-94554394 MsG0780041735.01.T01:intron 35.0%
! TAGTATGACTAGCCAACATA+AGG + Chr7:94557105-94557124 None:intergenic 35.0%
! TCTTAATGCTGATTGTGTTG+TGG - Chr7:94555511-94555530 MsG0780041735.01.T01:intron 35.0%
! TTGAACATATGGGGATTTTC+TGG + Chr7:94556889-94556908 None:intergenic 35.0%
!! ACAAGTGAAGCATTGTGTAA+TGG + Chr7:94554462-94554481 None:intergenic 35.0%
!! TCTTATCTTGCTTTTCTGGT+AGG - Chr7:94556854-94556873 MsG0780041735.01.T01:intron 35.0%
!! TGTGTGCTTTGCTGTTTATT+AGG - Chr7:94557072-94557091 MsG0780041735.01.T01:intron 35.0%
!! TTTGCTGTTTATTAGGTCAG+CGG - Chr7:94557079-94557098 MsG0780041735.01.T01:intron 35.0%
!!! AGATGCCATTTTCTAATGAC+AGG - Chr7:94555716-94555735 MsG0780041735.01.T01:CDS 35.0%
!!! ATCTCTCGAGGCATTTTTTA+GGG + Chr7:94553421-94553440 None:intergenic 35.0%
!!! GAACCAGTTTTTTGCTGTAT+CGG + Chr7:94555403-94555422 None:intergenic 35.0%
!!! TATCTCTCGAGGCATTTTTT+AGG + Chr7:94553422-94553441 None:intergenic 35.0%
AAAAGCAGAGTGCAATTTGG+CGG - Chr7:94553227-94553246 MsG0780041735.01.T01:three_prime_UTR 40.0%
AAACAACTCTGTCTCGAACA+TGG - Chr7:94553493-94553512 MsG0780041735.01.T01:intron 40.0%
AAGGAATATGTGTAAGGGCA+AGG - Chr7:94554184-94554203 MsG0780041735.01.T01:intron 40.0%
AAGGTTGACGATATTCCTGT+CGG + Chr7:94554655-94554674 None:intergenic 40.0%
AAGTTGTTGAGAGAGAGAAG+GGG + Chr7:94553568-94553587 None:intergenic 40.0%
ACTATTGACACGAAGAATGC+TGG - Chr7:94558107-94558126 MsG0780041735.01.T01:five_prime_UTR 40.0%
ACTCGAAGAAAACCTGCTTA+TGG + Chr7:94557635-94557654 None:intergenic 40.0%
AGAAGTTGTTGAGAGAGAGA+AGG + Chr7:94553570-94553589 None:intergenic 40.0%
AGGTTCATGAAAGTTTGCAG+AGG - Chr7:94556698-94556717 MsG0780041735.01.T01:intron 40.0%
ATAACTAGAAAGGCCTCAGA+TGG - Chr7:94554628-94554647 MsG0780041735.01.T01:CDS 40.0%
ATCGGATGATATTTCCTTGC+AGG - Chr7:94555939-94555958 MsG0780041735.01.T01:CDS 40.0%
ATGATTGACAGAGAAGCAGA+TGG - Chr7:94554917-94554936 MsG0780041735.01.T01:intron 40.0%
ATTGACATTAAGTTCCTGGC+AGG - Chr7:94556067-94556086 MsG0780041735.01.T01:intron 40.0%
CAAACCAACCATATTGACAG+TGG + Chr7:94558021-94558040 None:intergenic 40.0%
CAAGGGAAGGAATATGTGTA+AGG - Chr7:94554178-94554197 MsG0780041735.01.T01:intron 40.0%
CAATTCCTGTAATCAAGGGA+AGG - Chr7:94554165-94554184 MsG0780041735.01.T01:intron 40.0%
CACTTGTCTCCATTTGGTTA+GGG + Chr7:94555442-94555461 None:intergenic 40.0%
CAGACATCACAGTAGAAACT+AGG + Chr7:94555616-94555635 None:intergenic 40.0%
CATAATATTCTTTGCCTGCC+AGG + Chr7:94556084-94556103 None:intergenic 40.0%
CATATGTTCAAACTGCACAC+AGG - Chr7:94556898-94556917 MsG0780041735.01.T01:intron 40.0%
CCCAGTCAGTGTATAAACTA+AGG + Chr7:94554378-94554397 None:intergenic 40.0%
CCCATACCTGCATAAATGAA+TGG + Chr7:94555353-94555372 None:intergenic 40.0%
CTATGTCATTCAATTGCTGG+AGG - Chr7:94554965-94554984 MsG0780041735.01.T01:intron 40.0%
CTCCTATGGAATGATCTATC+AGG + Chr7:94554745-94554764 None:intergenic 40.0%
CTGATGCTACCAATGACAAT+TGG - Chr7:94557326-94557345 MsG0780041735.01.T01:intron 40.0%
CTGGCAGGCAAAGAATATTA+TGG - Chr7:94556082-94556101 MsG0780041735.01.T01:intron 40.0%
CTGTGTGCAGTTTGAACATA+TGG + Chr7:94556900-94556919 None:intergenic 40.0%
CTTAAGAACCGACAATTTGC+TGG - Chr7:94555101-94555120 MsG0780041735.01.T01:intron 40.0%
GAACATGGTATCAGCAAAGA+CGG - Chr7:94553508-94553527 MsG0780041735.01.T01:intron 40.0%
GAAGTTGTTGAGAGAGAGAA+GGG + Chr7:94553569-94553588 None:intergenic 40.0%
GAATCAATTGTGAACCTGTG+TGG - Chr7:94554846-94554865 MsG0780041735.01.T01:intron 40.0%
GACAGTGGTATTCTGTACTA+CGG + Chr7:94558006-94558025 None:intergenic 40.0%
GATATAATCTGGGGATTCAC+AGG + Chr7:94557423-94557442 None:intergenic 40.0%
GATGTCCTAAGGCAAATACT+AGG + Chr7:94555022-94555041 None:intergenic 40.0%
GGAACACTTACAGCAAACAT+TGG + Chr7:94557214-94557233 None:intergenic 40.0%
GGCTCAGACATTTACTGAAA+AGG + Chr7:94557138-94557157 None:intergenic 40.0%
GGTCATTCAGAGTCTCTAAA+AGG + Chr7:94555382-94555401 None:intergenic 40.0%
GTGTGCAGTTTGAACATATG+GGG + Chr7:94556898-94556917 None:intergenic 40.0%
GTTTGCACAGTTCTCAATGT+TGG - Chr7:94553990-94554009 MsG0780041735.01.T01:CDS 40.0%
TCAAGAGCGGAAATTGAACA+GGG - Chr7:94555139-94555158 MsG0780041735.01.T01:intron 40.0%
TCACTTGTCTCCATTTGGTT+AGG + Chr7:94555443-94555462 None:intergenic 40.0%
TCCTTCTCAACTTATCGTAC+TGG + Chr7:94557159-94557178 None:intergenic 40.0%
TCTGAATATCATCCAAGGAG+AGG - Chr7:94556157-94556176 MsG0780041735.01.T01:intron 40.0%
TGAAGTGTGATTATCTCTCG+AGG + Chr7:94553433-94553452 None:intergenic 40.0%
TGACCGATACAGCAAAAAAC+TGG - Chr7:94555397-94555416 MsG0780041735.01.T01:intron 40.0%
! AAGTCTTATCCGACTAAGTG+AGG + Chr7:94553878-94553897 None:intergenic 40.0%
! ACGAATTACATTAGCCTGCA+AGG + Chr7:94555956-94555975 None:intergenic 40.0%
! AGAAAATGGCATCTTGGTGT+TGG + Chr7:94555710-94555729 None:intergenic 40.0%
! GGTAGTTTTTGTACAGTACC+TGG - Chr7:94554684-94554703 MsG0780041735.01.T01:intron 40.0%
! TTTATACACTGACTGGGAGT+TGG - Chr7:94554381-94554400 MsG0780041735.01.T01:intron 40.0%
!! GCAATAAGGAAGTGGTTTTG+TGG - Chr7:94557886-94557905 MsG0780041735.01.T01:CDS 40.0%
!! TCTTGGTGTTGGAATCAAAG+AGG + Chr7:94555699-94555718 None:intergenic 40.0%
!! TTTAGCTTGGCTAGCATCTT+TGG + Chr7:94556126-94556145 None:intergenic 40.0%
!!! ATAAGGAAGTGGTTTTGTGG+CGG - Chr7:94557889-94557908 MsG0780041735.01.T01:CDS 40.0%
!!! CGAGGCATTTTTTAGGGTTT+CGG + Chr7:94553415-94553434 None:intergenic 40.0%
!!! GCATTTTTTAGGGTTTCGGA+GGG + Chr7:94553411-94553430 None:intergenic 40.0%
AAGAGCGGAAATTGAACAGG+GGG - Chr7:94555141-94555160 MsG0780041735.01.T01:intron 45.0%
AATGGAGACAAGTGATGTGG+TGG - Chr7:94555448-94555467 MsG0780041735.01.T01:intron 45.0%
ACAACCACTCTTCGTTATCC+AGG - Chr7:94555641-94555660 MsG0780041735.01.T01:CDS 45.0%
ACACTTCAAGTGGGACAATG+CGG - Chr7:94553445-94553464 MsG0780041735.01.T01:three_prime_UTR 45.0%
ACCAGATCGGTATGGAATTC+TGG - Chr7:94553470-94553489 MsG0780041735.01.T01:intron 45.0%
AGGGCAAGGTGTATAAGAGA+AGG - Chr7:94554198-94554217 MsG0780041735.01.T01:CDS 45.0%
AGTGGTATTCTGTACTACGG+CGG + Chr7:94558003-94558022 None:intergenic 45.0%
ATAACGAAGAGTGGTTGTGC+TGG + Chr7:94555639-94555658 None:intergenic 45.0%
ATCAAATGGGGAATGGAGGT+AGG - Chr7:94557440-94557459 MsG0780041735.01.T01:intron 45.0%
ATCATCCGATCAGATTACGG+AGG + Chr7:94555929-94555948 None:intergenic 45.0%
CAAGAGCGGAAATTGAACAG+GGG - Chr7:94555140-94555159 MsG0780041735.01.T01:intron 45.0%
CAATCAATGACTCTGGTGTC+TGG - Chr7:94554497-94554516 MsG0780041735.01.T01:intron 45.0%
CAGTGTGTTCCCTAACCAAA+TGG - Chr7:94555430-94555449 MsG0780041735.01.T01:intron 45.0%
CCAAATGGAGACAAGTGATG+TGG - Chr7:94555445-94555464 MsG0780041735.01.T01:intron 45.0%
CCACATCACTTGTCTCCATT+TGG + Chr7:94555448-94555467 None:intergenic 45.0%
CTCAAGAGCGGAAATTGAAC+AGG - Chr7:94555138-94555157 MsG0780041735.01.T01:intron 45.0%
CTTATCCGACTAAGTGAGGT+CGG + Chr7:94553874-94553893 None:intergenic 45.0%
GCATCTGTTCTGTACTTGGA+TGG - Chr7:94557272-94557291 MsG0780041735.01.T01:intron 45.0%
GCTACCAATGACAATTGGAC+AGG - Chr7:94557331-94557350 MsG0780041735.01.T01:intron 45.0%
GCTTGTGAAGACATTCGTCA+CGG - Chr7:94553954-94553973 MsG0780041735.01.T01:CDS 45.0%
GGGTGTGAATTATGTGAGGA+TGG - Chr7:94554236-94554255 MsG0780041735.01.T01:CDS 45.0%
GGTTGAAAAGTAGAGAGTGG+TGG - Chr7:94553248-94553267 MsG0780041735.01.T01:three_prime_UTR 45.0%
GTATCCTGGATAACGAAGAG+TGG + Chr7:94555648-94555667 None:intergenic 45.0%
GTATTCAGGTATGCGATCTG+TGG - Chr7:94556767-94556786 MsG0780041735.01.T01:intron 45.0%
GTGTTGGAATCAAAGAGGCA+AGG + Chr7:94555694-94555713 None:intergenic 45.0%
TCCAGAATTCCATACCGATC+TGG + Chr7:94553474-94553493 None:intergenic 45.0%
TCGCATACCTGAATACTAGC+AGG + Chr7:94556763-94556782 None:intergenic 45.0%
TGCTGCATCTGTTCTGTACT+TGG - Chr7:94557268-94557287 MsG0780041735.01.T01:intron 45.0%
TTATCCGACTAAGTGAGGTC+GGG + Chr7:94553873-94553892 None:intergenic 45.0%
TTCTTGTGTACTTGACTGGC+AGG - Chr7:94557857-94557876 MsG0780041735.01.T01:CDS 45.0%
TTTGTTGCTGATCATGGTGG+TGG - Chr7:94553786-94553805 MsG0780041735.01.T01:CDS 45.0%
! ACTATTTTACCCATGCTCGC+TGG - Chr7:94553613-94553632 MsG0780041735.01.T01:intron 45.0%
! GAGAGGGTGTGAATTATGTG+AGG - Chr7:94554232-94554251 MsG0780041735.01.T01:CDS 45.0%
! GCCAGTACGATAAGTTGAGA+AGG - Chr7:94557155-94557174 MsG0780041735.01.T01:intron 45.0%
!! TGGTGGTGCTGGTAACAATT+GGG - Chr7:94553803-94553822 MsG0780041735.01.T01:intron 45.0%
!!! GGCATTTTTTAGGGTTTCGG+AGG + Chr7:94553412-94553431 None:intergenic 45.0%
ACACGAAGAATGCTGGCAAG+TGG - Chr7:94558114-94558133 MsG0780041735.01.T01:five_prime_UTR 50.0%
ACTAAGTGAGGTCGGGTACA+TGG + Chr7:94553866-94553885 None:intergenic 50.0%
AGAGCGGAAATTGAACAGGG+GGG - Chr7:94555142-94555161 MsG0780041735.01.T01:intron 50.0%
AGATGGCAGTGACAGTCTTG+AGG - Chr7:94554934-94554953 MsG0780041735.01.T01:intron 50.0%
AGGATATACGCCTCTGACAG+TGG - Chr7:94555736-94555755 MsG0780041735.01.T01:CDS 50.0%
ATGCGGAAACCAGATCGGTA+TGG - Chr7:94553462-94553481 MsG0780041735.01.T01:intron 50.0%
CAAGAGGAGAAAGATCGGAG+AGG + Chr7:94554275-94554294 None:intergenic 50.0%
CAAGCACAACCCTAGAAGGA+AGG + Chr7:94557767-94557786 None:intergenic 50.0%
CATTCAATTGCTGGAGGGAC+AGG - Chr7:94554971-94554990 MsG0780041735.01.T01:intron 50.0%
CCACTGTGCTTGATGTCATG+AGG - Chr7:94555980-94555999 MsG0780041735.01.T01:intron 50.0%
CCTCATGACATCAAGCACAG+TGG + Chr7:94555983-94556002 None:intergenic 50.0%
CCTCGAAGATTTCGCTACTC+AGG - Chr7:94553534-94553553 MsG0780041735.01.T01:intron 50.0%
CCTGAGTAGCGAAATCTTCG+AGG + Chr7:94553537-94553556 None:intergenic 50.0%
GACTCTGGTGTCTGGTCTAT+TGG - Chr7:94554505-94554524 MsG0780041735.01.T01:intron 50.0%
GATGGCAGTGACAGTCTTGA+GGG - Chr7:94554935-94554954 MsG0780041735.01.T01:intron 50.0%
GGACAATGCGGAAACCAGAT+CGG - Chr7:94553457-94553476 MsG0780041735.01.T01:three_prime_UTR 50.0%
GGCGGTTGAAAAGTAGAGAG+TGG - Chr7:94553245-94553264 MsG0780041735.01.T01:three_prime_UTR 50.0%
GGTGACGAGCAATAAGGAAG+TGG - Chr7:94557878-94557897 MsG0780041735.01.T01:CDS 50.0%
GTTCAAACTGCACACAGGGT+AGG - Chr7:94556903-94556922 MsG0780041735.01.T01:intron 50.0%
GTTGAGCTCATTTGGTACCG+TGG - Chr7:94556288-94556307 MsG0780041735.01.T01:intron 50.0%
TATTCCTGTCGGACCATCTG+AGG + Chr7:94554644-94554663 None:intergenic 50.0%
TGTACCCGACCTCACTTAGT+CGG - Chr7:94553866-94553885 MsG0780041735.01.T01:intron 50.0%
TGTCATGAGGAGACTTCTGC+AGG - Chr7:94555993-94556012 MsG0780041735.01.T01:intron 50.0%
TGTTGAGAGAGAGAAGGGGA+TGG + Chr7:94553564-94553583 None:intergenic 50.0%
! GAGGCAAAAGTATGCAGCTG+TGG + Chr7:94556811-94556830 None:intergenic 50.0%
! GCTGGTAACAATTGGGCTAG+TGG - Chr7:94553810-94553829 MsG0780041735.01.T01:intron 50.0%
! TTAGGTCAGCGGCCTTATGT+TGG - Chr7:94557090-94557109 MsG0780041735.01.T01:intron 50.0%
!! GTGGTGGTGCTGGTAACAAT+TGG - Chr7:94553802-94553821 MsG0780041735.01.T01:CDS 50.0%
ACCTGACGTTCCACTGTCAG+AGG + Chr7:94555749-94555768 None:intergenic 55.0%
AGGAGAGGTTGACCCAACTC+AGG - Chr7:94556172-94556191 MsG0780041735.01.T01:intron 55.0%
AGTGAGGTCGGGTACATGGA+TGG + Chr7:94553862-94553881 None:intergenic 55.0%
CTGGCAGGTGACGAGCAATA+AGG - Chr7:94557872-94557891 MsG0780041735.01.T01:CDS 55.0%
GAGCGGAAATTGAACAGGGG+GGG - Chr7:94555143-94555162 MsG0780041735.01.T01:intron 55.0%
GAGTTGGGTCAACCTCTCCT+TGG + Chr7:94556172-94556191 None:intergenic 55.0%
GGCACAAGCACAACCCTAGA+AGG + Chr7:94557771-94557790 None:intergenic 55.0%
GTGGGGTCCTGCTAGTATTC+AGG - Chr7:94556753-94556772 MsG0780041735.01.T01:intron 55.0%
!! TTGGGCTAGTGGCTACCATC+AGG - Chr7:94553821-94553840 MsG0780041735.01.T01:intron 55.0%
AAGGCCTCAGATGGTCCGAC+AGG - Chr7:94554637-94554656 MsG0780041735.01.T01:CDS 60.0%
ATTGCTGGAGGGACAGGCTC+AGG - Chr7:94554977-94554996 MsG0780041735.01.T01:intron 60.0%
GCCTCTGACAGTGGAACGTC+AGG - Chr7:94555745-94555764 MsG0780041735.01.T01:CDS 60.0%
!! GCTGATCATGGTGGTGGTGC+TGG - Chr7:94553792-94553811 MsG0780041735.01.T01:CDS 60.0%
ACAGGAGAGGGCAGTGCTGC+AGG - Chr7:94557553-94557572 MsG0780041735.01.T01:CDS 65.0%
GGGCAGTGCTGCAGGATCAC+TGG - Chr7:94557561-94557580 MsG0780041735.01.T01:CDS 65.0%
TCCCTGCAGCCAGCGAGCAT+GGG + Chr7:94553625-94553644 None:intergenic 65.0%
! ACCCATGCTCGCTGGCTGCA+GGG - Chr7:94553621-94553640 MsG0780041735.01.T01:intron 65.0%
! TACCCATGCTCGCTGGCTGC+AGG - Chr7:94553620-94553639 MsG0780041735.01.T01:intron 65.0%
CTCCCTGCAGCCAGCGAGCA+TGG + Chr7:94553626-94553645 None:intergenic 70.0%
! CATGCTCGCTGGCTGCAGGG+AGG - Chr7:94553624-94553643 MsG0780041735.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 94553203 94558153 94553203 ID=MsG0780041735.01;Name=MsG0780041735.01
Chr7 mRNA 94553203 94558153 94553203 ID=MsG0780041735.01.T01;Parent=MsG0780041735.01;Name=MsG0780041735.01.T01;_AED=0.49;_eAED=0.51;_QI=224|0.90|0.83|1|0.72|0.66|12|284|485
Chr7 exon 94553203 94553477 94553203 ID=MsG0780041735.01.T01:exon:22621;Parent=MsG0780041735.01.T01
Chr7 exon 94553744 94553821 94553744 ID=MsG0780041735.01.T01:exon:22620;Parent=MsG0780041735.01.T01
Chr7 exon 94553899 94554100 94553899 ID=MsG0780041735.01.T01:exon:22619;Parent=MsG0780041735.01.T01
Chr7 exon 94554198 94554262 94554198 ID=MsG0780041735.01.T01:exon:22618;Parent=MsG0780041735.01.T01
Chr7 exon 94554436 94554480 94554436 ID=MsG0780041735.01.T01:exon:22617;Parent=MsG0780041735.01.T01
Chr7 exon 94554582 94554656 94554582 ID=MsG0780041735.01.T01:exon:22616;Parent=MsG0780041735.01.T01
Chr7 exon 94555163 94555267 94555163 ID=MsG0780041735.01.T01:exon:22615;Parent=MsG0780041735.01.T01
Chr7 exon 94555342 94555395 94555342 ID=MsG0780041735.01.T01:exon:22614;Parent=MsG0780041735.01.T01
Chr7 exon 94555590 94555990 94555590 ID=MsG0780041735.01.T01:exon:22613;Parent=MsG0780041735.01.T01
Chr7 exon 94556358 94556469 94556358 ID=MsG0780041735.01.T01:exon:22612;Parent=MsG0780041735.01.T01
Chr7 exon 94557514 94557714 94557514 ID=MsG0780041735.01.T01:exon:22611;Parent=MsG0780041735.01.T01
Chr7 exon 94557801 94558153 94557801 ID=MsG0780041735.01.T01:exon:22610;Parent=MsG0780041735.01.T01
Chr7 five_prime_UTR 94557930 94558153 94557930 ID=MsG0780041735.01.T01:five_prime_utr;Parent=MsG0780041735.01.T01
Chr7 CDS 94557801 94557929 94557801 ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01
Chr7 CDS 94557514 94557714 94557514 ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01
Chr7 CDS 94556358 94556469 94556358 ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01
Chr7 CDS 94555590 94555990 94555590 ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01
Chr7 CDS 94555342 94555395 94555342 ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01
Chr7 CDS 94555163 94555267 94555163 ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01
Chr7 CDS 94554582 94554656 94554582 ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01
Chr7 CDS 94554436 94554480 94554436 ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01
Chr7 CDS 94554198 94554262 94554198 ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01
Chr7 CDS 94553899 94554100 94553899 ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01
Chr7 CDS 94553753 94553821 94553753 ID=MsG0780041735.01.T01:cds;Parent=MsG0780041735.01.T01
Chr7 three_prime_UTR 94553744 94553752 94553744 ID=MsG0780041735.01.T01:three_prime_utr;Parent=MsG0780041735.01.T01
Chr7 three_prime_UTR 94553203 94553477 94553203 ID=MsG0780041735.01.T01:three_prime_utr;Parent=MsG0780041735.01.T01
Gene Sequence

>MsG0780041735.01.T01

ATGCCTCGAGAGATAATCACACTTCAAGTGGGACAATGCGGAAACCAGATCGGTATGGAATTCTGGAAACAACTCTGTCTCGAACATGGTATCAGCAAAGACGGCATCCTCGAAGATTTCGCTACTCAGGGAGGTGATAGAAAAGATGTTTTCTTTTATCAAGCTGATGATCAACATTACATACCCCGTGCTTTATTGATTGATTTGGAACCAAGGGTTATTAATGGAATTCAAAATAGTGATTACCGTAATCTTTACAATCATGAGAATATTTTTGTTGCTGATCATGGTGGTGGTGCTGGTAACAATTGGGCTAGTGGCTACCATCAGGGAAAGAATGTTGAAGAAGACATAATGGACATGATTGACAGAGAAGCAGATGGCAGTGACAGTCTTGAGGGTTTTGTTCTATGTCATTCAATTGCTGGAGGGACAGGCTCAGGTATGGGCTCATACCTTTTAGAGACTCTGAATGACCGATACAGCAAAAAACTGGTTCAGACATACAGTGTGTTCCCTAACCAAATGGAGACAAGTGATGTGGTGGTCCAACCATATAACTCACTTTTGACACTCAAGCGACTGACTCTTAATGCTGATTGTGTTGTGGTTCTTGACAATACTGCACTTAATAGAATTGCTGTGGAGCGACTGCATTTATCAAATCCAACATTTGCTCAAACAAATTCCCTAGTTTCTACTGTGATGTCTGCCAGCACAACCACTCTTCGTTATCCAGGATACATGAATAATGACTTGGTTGGTCTCCTTGCCTCTTTGATTCCAACACCAAGATGCCATTTTCTAATGACAGGATATACGCCTCTGACAGTGGAACGTCAGGCTAATGTAATTCGTAAGACCACTGTGCTTGATGTCATGAGGAGACTTCTGCAGGCAAAGAATATTATGGTCTCTTCTTATGCACGGACCAAAGATGCTAGCCAAGCTAAATATATATCAATTCTGAATATCATCCAAGGAGAGGTTGACCCAACTCAGGTTCATGAAAGTTTGCAGAGGATTCGTGAAAGAAAGCTAGTTAACTTTATTGAGTGGGGTCCTGCTAGTATTCAGGTTGCTCTATCCAGAAAATCCCCATATGTTCAAACTGCACACAGGGTCAGCGGCCTTATGTTGGCTAGTCATACTAGCATCCGTCACCTTTTCAGTAAATGTCTGAGCCACACTGCTGTTGCTGCTGCATCTGTTCTGTACTTGGATGGCAGCATCAACATTAGATACTTGTCATTTCATCTGATGCTACCAATGACAATTGGACAGGATAATGACCTCTCAGAGTTTGATGAATCAAGAGACATTATTGAGAGTTTGGTTGACGAATATAAGGCCTGTGAATCCCCAGATTATATCAAATGGGGAATGGAGGATCCGAATAATATGATGACAGGAGAGGGCAGTGCTGCAGGATCACTGGATCCAAAATCAGTAGTATGA

Protein sequence

>MsG0780041735.01.T01

MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNSDYRNLYNHENIFVADHGGGAGNNWASGYHQGKNVEEDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSHTAVAAASVLYLDGSINIRYLSFHLMLPMTIGQDNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPNNMMTGEGSAAGSLDPKSVV*