AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028001.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028001.01.T01 MTR_5g055170 72.000 475 65 7 1 474 1 408 0.0 615
MsG0580028001.01.T01 MTR_5g055170 94.845 291 13 1 184 474 65 353 0.0 542
MsG0580028001.01.T01 MTR_5g055170 97.872 47 1 0 76 122 24 70 2.84e-23 102
MsG0580028001.01.T01 MTR_5g010140 61.746 481 112 8 1 474 1 416 0.0 518
MsG0580028001.01.T01 MTR_5g010140 77.778 297 60 2 184 474 13 309 2.64e-155 446
MsG0580028001.01.T01 MTR_4g083690 34.783 115 69 3 202 310 163 277 8.35e-15 77.4
MsG0580028001.01.T01 MTR_2g068690 30.464 151 97 4 201 346 161 308 1.91e-14 76.6
MsG0580028001.01.T01 MTR_7g094070 26.977 215 122 7 202 393 133 335 1.15e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028001.01.T01 AT2G26430 48.861 483 154 13 1 473 1 400 9.82e-123 366
MsG0580028001.01.T01 AT2G26430 54.354 333 86 6 1 332 1 268 1.35e-107 323
MsG0580028001.01.T01 AT2G26430 56.231 329 108 8 154 473 44 345 8.17e-103 313
MsG0580028001.01.T01 AT2G26430 64.706 68 15 1 64 122 3 70 8.26e-21 94.4
MsG0580028001.01.T01 AT2G26430 56.231 329 108 8 154 473 44 345 8.17e-103 313
MsG0580028001.01.T01 AT2G26430 64.706 68 15 1 64 122 3 70 8.26e-21 94.4
MsG0580028001.01.T01 AT5G45190 25.326 383 193 14 18 378 43 354 9.41e-17 84.0
MsG0580028001.01.T01 AT4G19600 29.237 236 132 9 202 425 162 374 7.58e-15 77.8
MsG0580028001.01.T01 AT5G45190 28.649 185 121 5 202 378 162 343 1.39e-14 77.0
MsG0580028001.01.T01 AT5G45190 28.649 185 121 5 202 378 53 234 3.23e-14 75.5
MsG0580028001.01.T01 AT1G35440 31.897 116 74 2 194 304 121 236 1.94e-12 67.8

Find 126 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGCTTCTTGCCTCAATTC+TGG 0.172280 5:+72829520 None:intergenic
ATATCAGGTCCCTGTCATTT+AGG 0.183269 5:+72830254 None:intergenic
CTTCTTCGCGTGCTCCCTTT+AGG 0.210389 5:+72827282 None:intergenic
TAAGTAAAATACCACTTTCT+TGG 0.231396 5:+72830767 None:intergenic
TGATGAAGTCTGCAGGGTTT+TGG 0.265839 5:-72827984 MsG0580028001.01.T01:CDS
TTCTTCGCGTGCTCCCTTTA+GGG 0.274161 5:+72827283 None:intergenic
TTGCATTTGCTATTTACTTT+TGG 0.282196 5:-72826799 MsG0580028001.01.T01:CDS
TATCAGGTCCCTGTCATTTA+GGG 0.290941 5:+72830255 None:intergenic
GAAATACGTAAATTTGAAAA+TGG 0.299524 5:-72829650 MsG0580028001.01.T01:CDS
CTCCACTCTACGATCGGATT+TGG 0.324420 5:+72827121 None:intergenic
TGTGGTCTGTCACACAATTA+AGG 0.328793 5:+72830658 None:intergenic
AGGATCATGGTCATCATTCT+AGG 0.332826 5:-72826980 MsG0580028001.01.T01:CDS
TCTTTCAGCAACTATGACTT+TGG 0.333478 5:+72827172 None:intergenic
GAAACCACTCTTAGAATATA+TGG 0.347031 5:-72830802 MsG0580028001.01.T01:CDS
TTCTATACACCTTCCATATC+AGG 0.352569 5:+72830239 None:intergenic
TAAATGACAGGGACCTGATA+TGG 0.354348 5:-72830252 MsG0580028001.01.T01:CDS
TACATTCTCCAACAAATCAT+TGG 0.357406 5:-72827900 MsG0580028001.01.T01:CDS
TAGAAAGGGAAACCACAATT+TGG 0.360921 5:-72830215 MsG0580028001.01.T01:CDS
AGGCAGAGAGCAAGGGAATC+AGG 0.372044 5:-72826960 MsG0580028001.01.T01:intron
GCATTTGATGCAGAAAAGTC+TGG 0.390327 5:-72828010 MsG0580028001.01.T01:CDS
TTCCACCATGGTGGGTTCTC+AGG 0.391685 5:+72828034 None:intergenic
CTGGCGTCTCAGCATTCATT+GGG 0.395131 5:+72827306 None:intergenic
TTTCTCTCTTGACGAGTAAG+AGG 0.405972 5:+72826723 None:intergenic
CTTTGATTCCAATGATTTGT+TGG 0.409983 5:+72827892 None:intergenic
GATCGTAGAGTGGAGGCCTC+TGG 0.433393 5:-72827113 MsG0580028001.01.T01:CDS
TTCATTGGGGAGCTACTTTG+TGG 0.439063 5:+72827320 None:intergenic
GAGGCAAGAAGCTTGGAATC+TGG 0.440220 5:-72829512 MsG0580028001.01.T01:CDS
TTGGTTGGCTTCAAAATTAG+AGG 0.440248 5:-72830458 MsG0580028001.01.T01:CDS
GAGTAGCAGCAAGGGTGCTT+TGG 0.446235 5:-72827246 MsG0580028001.01.T01:CDS
GAGTCCTCATCCTTGCAAAC+TGG 0.446661 5:+72827926 None:intergenic
TGCTGAGACGCCAGCCCTAA+AGG 0.447616 5:-72827297 MsG0580028001.01.T01:CDS
GCTGGCGTCTCAGCATTCAT+TGG 0.451862 5:+72827305 None:intergenic
GCTGAGACGCCAGCCCTAAA+GGG 0.452782 5:-72827296 MsG0580028001.01.T01:CDS
ACTGGTATATATTGTGCCTT+GGG 0.453233 5:+72827944 None:intergenic
GAAGGTGTATAGAATTAGAA+AGG 0.454085 5:-72830230 MsG0580028001.01.T01:CDS
ACCATGGTGGGTTCTCAGGA+AGG 0.456246 5:+72828038 None:intergenic
CAAGGGGTCGTGGTCGAGGA+AGG 0.462645 5:-72827058 MsG0580028001.01.T01:CDS
CTTGGAATCTGGCTAATGAT+AGG 0.463722 5:-72829501 MsG0580028001.01.T01:intron
TCAATTCTGGAGGAGTTTCA+AGG 0.464283 5:+72829533 None:intergenic
TCGCGTGCTCCCTTTAGGGC+TGG 0.471935 5:+72827287 None:intergenic
TAGATTTAAGAGTGAGGTTG+TGG 0.472582 5:-72828104 MsG0580028001.01.T01:CDS
TGCAATAGAATCGATGCAAT+AGG 0.484219 5:+72830615 None:intergenic
CTGGGATTGATGAAGTCTGC+AGG 0.484302 5:-72827991 MsG0580028001.01.T01:CDS
TTTAGGGATTCTTTCAGCAT+GGG 0.484556 5:+72830271 None:intergenic
CAGAATTGAGGCAAGAAGCT+TGG 0.488742 5:-72829519 MsG0580028001.01.T01:CDS
AACTGGTATATATTGTGCCT+TGG 0.490100 5:+72827943 None:intergenic
ATTTAGGGATTCTTTCAGCA+TGG 0.493184 5:+72830270 None:intergenic
AGCATCGTTCAGCTTATCAC+TGG 0.504160 5:+72827214 None:intergenic
AAATCAAGGGGTCGTGGTCG+AGG 0.507332 5:-72827062 MsG0580028001.01.T01:CDS
AAGTTGCCGCAAGCTGTGTT+TGG 0.512448 5:-72830477 MsG0580028001.01.T01:CDS
ATCATTCTAGGCAGAGAGCA+AGG 0.512633 5:-72826968 MsG0580028001.01.T01:CDS
CAACAAATCATTGGAATCAA+AGG 0.513789 5:-72827891 MsG0580028001.01.T01:CDS
TCAAAACGCCATTCGTCGCA+TGG 0.519412 5:-72826846 MsG0580028001.01.T01:CDS
TCTCCCTCCTGCATTCCATC+CGG 0.520050 5:+72830395 None:intergenic
ACCTGGACAGAATAAAATCA+AGG 0.522052 5:-72827076 MsG0580028001.01.T01:CDS
AATTCACCCTCCAGAAAAGA+TGG 0.522827 5:-72830841 MsG0580028001.01.T01:CDS
GTATTTAGACTTCTATTCAA+AGG 0.526844 5:-72830359 MsG0580028001.01.T01:CDS
TGAAAGAATCCCTAAATGAC+AGG 0.539244 5:-72830264 MsG0580028001.01.T01:CDS
TGACAGACCACAAGCGGTCA+TGG 0.542935 5:-72830647 MsG0580028001.01.T01:CDS
TTGAAACTCCTCCAGAATTG+AGG 0.543403 5:-72829531 MsG0580028001.01.T01:CDS
CATGGTGGGTTCTCAGGAAG+GGG 0.543473 5:+72828040 None:intergenic
CCATGGTGGGTTCTCAGGAA+GGG 0.543998 5:+72828039 None:intergenic
TGGAGACTTACGCAGGGACC+TGG 0.549439 5:-72827093 MsG0580028001.01.T01:CDS
AGCTGAGAGGTTCAAACTCA+AGG 0.549687 5:-72827000 MsG0580028001.01.T01:CDS
TGCCGCAAGCTGTGTTTGGT+TGG 0.552673 5:-72830473 MsG0580028001.01.T01:CDS
TGAACGTGAGCGTGAGCGAG+AGG 0.553162 5:-72827024 MsG0580028001.01.T01:CDS
TATACCAGTTTGCAAGGATG+AGG 0.556151 5:-72827930 MsG0580028001.01.T01:CDS
GTGATAAGCTGAACGATGCT+AGG 0.556707 5:-72827211 MsG0580028001.01.T01:CDS
GATTCATACCATGCGACGAA+TGG 0.559041 5:+72826838 None:intergenic
GTGCCTTGGGAAGACTATAG+AGG 0.560312 5:+72827957 None:intergenic
CATTTGATGCAGAAAAGTCT+GGG 0.560461 5:-72828009 MsG0580028001.01.T01:CDS
AGGTTCAAACTCAAGGATCA+TGG 0.560834 5:-72826993 MsG0580028001.01.T01:CDS
ACAATATATACCAGTTTGCA+AGG 0.565212 5:-72827936 MsG0580028001.01.T01:CDS
TTGTATATGCTGCAGCTCGT+AGG 0.566830 5:-72828072 MsG0580028001.01.T01:CDS
CTTCTAGCCATGACCGCTTG+TGG 0.568897 5:+72830640 None:intergenic
CAAATGCCTTCCACCATGGT+GGG 0.570718 5:+72828026 None:intergenic
ATCATTGGAATCAAAGGCGA+TGG 0.573795 5:-72827885 MsG0580028001.01.T01:intron
AAGGTGTATAGAATTAGAAA+GGG 0.576481 5:-72830229 MsG0580028001.01.T01:CDS
CAATTCTGGAGGAGTTTCAA+GGG 0.582921 5:+72829534 None:intergenic
TAGAAGTCTAAATACTCCAC+GGG 0.584600 5:+72830367 None:intergenic
TGTGATCTTATCCAAGAAAG+TGG 0.584869 5:-72830778 MsG0580028001.01.T01:intron
TGAGAACCCACCATGGTGGA+AGG 0.591178 5:-72828032 MsG0580028001.01.T01:CDS
AAGGGGTCGTGGTCGAGGAA+GGG 0.591269 5:-72827057 MsG0580028001.01.T01:CDS
AGAATAAAATCAAGGGGTCG+TGG 0.591967 5:-72827068 MsG0580028001.01.T01:CDS
ACTCGTCAAGAGAGAAAGAT+CGG 0.593717 5:-72826717 MsG0580028001.01.T01:CDS
GAGGAGTTTCAAGGGTGGCA+AGG 0.594569 5:+72829542 None:intergenic
ATTGCAAGAAGTCGTTTGCA+CGG 0.595359 5:-72830598 MsG0580028001.01.T01:intron
AAGAGTGAGGTTGTGGCCTG+TGG 0.596004 5:-72828097 MsG0580028001.01.T01:CDS
ATTGACTTGAGTAGCAGCAA+GGG 0.596837 5:-72827254 MsG0580028001.01.T01:CDS
GTCCCTGCGTAAGTCTCCAG+AGG 0.600024 5:+72827097 None:intergenic
TCAAATGCCTTCCACCATGG+TGG 0.600306 5:+72828025 None:intergenic
ATCCAAATCCGATCGTAGAG+TGG 0.603043 5:-72827123 MsG0580028001.01.T01:CDS
CCTGGACAGAATAAAATCAA+GGG 0.606075 5:-72827075 MsG0580028001.01.T01:CDS
TATTGACTTGAGTAGCAGCA+AGG 0.606402 5:-72827255 MsG0580028001.01.T01:CDS
ACAGCCATATATTCTAAGAG+TGG 0.606850 5:+72830798 None:intergenic
GGCCTCTGGAGACTTACGCA+GGG 0.608353 5:-72827099 MsG0580028001.01.T01:CDS
AGAGGCCTCCACTCTACGAT+CGG 0.609713 5:+72827115 None:intergenic
TTCACCGGATGGAATGCAGG+AGG 0.612728 5:-72830399 MsG0580028001.01.T01:CDS
TGGGATTGATGAAGTCTGCA+GGG 0.613854 5:-72827990 MsG0580028001.01.T01:CDS
TCACCGGATGGAATGCAGGA+GGG 0.613995 5:-72830398 MsG0580028001.01.T01:CDS
ATTGTGTGACAGACCACAAG+CGG 0.616676 5:-72830653 MsG0580028001.01.T01:CDS
GCTTCTTGCCTCAATTCTGG+AGG 0.618522 5:+72829523 None:intergenic
ATAGAAGTCTAAATACTCCA+CGG 0.619780 5:+72830366 None:intergenic
AAGAGGAACTGTAGTAGTCA+CGG 0.627749 5:+72826740 None:intergenic
TAATTTGAAATAAACTTGTG+AGG 0.628660 5:+72829565 None:intergenic
TGCAGCATATACAACTCCAC+AGG 0.630101 5:+72828081 None:intergenic
GCATCAAATGCCTTCCACCA+TGG 0.634933 5:+72828022 None:intergenic
TTCTGGAGGAGTTTCAAGGG+TGG 0.638431 5:+72829537 None:intergenic
AATAGACACGTTCTACCTCA+CGG 0.640021 5:-72830878 MsG0580028001.01.T01:CDS
GTGTGTTAGATTTAAGAGTG+AGG 0.641152 5:-72828110 MsG0580028001.01.T01:CDS
TGACAGGGACCTGATATGGA+AGG 0.646987 5:-72830248 MsG0580028001.01.T01:CDS
AGGCCTCTGGAGACTTACGC+AGG 0.648323 5:-72827100 MsG0580028001.01.T01:CDS
TCATTCTAGGCAGAGAGCAA+GGG 0.648859 5:-72826967 MsG0580028001.01.T01:CDS
CACTTTCAAAGACCAAATTG+TGG 0.654420 5:+72830203 None:intergenic
TTACCTCTATAGTCTTCCCA+AGG 0.657326 5:-72827960 MsG0580028001.01.T01:CDS
CAAATCCGATCGTAGAGTGG+AGG 0.660635 5:-72827120 MsG0580028001.01.T01:CDS
GTGAGCGAGAGGAAGCTGAG+AGG 0.661858 5:-72827013 MsG0580028001.01.T01:CDS
AGCCAACCAAACACAGCTTG+CGG 0.663736 5:+72830471 None:intergenic
TTGTTAACTGCTCATCCGTG+AGG 0.663809 5:+72830863 None:intergenic
CAGGAGGGAGAACTTGCCCG+TGG 0.665374 5:-72830383 MsG0580028001.01.T01:CDS
GAAAGAATCCCTAAATGACA+GGG 0.665897 5:-72830263 MsG0580028001.01.T01:CDS
TGGCGTCTCAGCATTCATTG+GGG 0.676201 5:+72827307 None:intergenic
CCCTTCCTGAGAACCCACCA+TGG 0.678427 5:-72828039 MsG0580028001.01.T01:CDS
CTGGACAGAATAAAATCAAG+GGG 0.679905 5:-72827074 MsG0580028001.01.T01:CDS
TTCCTGAGAACCCACCATGG+TGG 0.689912 5:-72828036 MsG0580028001.01.T01:CDS
ATGCAAAACTCACAAAGACA+CGG 0.700468 5:+72826816 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATTATAAATAAGAG+AGG + Chr5:72828614-72828633 None:intergenic 10.0%
!! ATAAAAAAATATAATTAGGT+AGG + Chr5:72829435-72829454 None:intergenic 10.0%
!! ATCATCTTAATTATTATATT+TGG - Chr5:72828819-72828838 MsG0580028001.01.T01:intron 10.0%
!! AACGAAGTTAAAAATAATAT+TGG - Chr5:72828889-72828908 MsG0580028001.01.T01:intron 15.0%
!! AATAATTAAGATGATATTCA+GGG + Chr5:72828814-72828833 None:intergenic 15.0%
!! AGAACAAAAATAGTATAATT+CGG + Chr5:72828244-72828263 None:intergenic 15.0%
!! AGCAAAATTTCAAAATTAAA+AGG + Chr5:72829735-72829754 None:intergenic 15.0%
!! CTGCATAAAAAAATATAATT+AGG + Chr5:72829439-72829458 None:intergenic 15.0%
!! GCAAAATTTCAAAATTAAAA+GGG + Chr5:72829734-72829753 None:intergenic 15.0%
!! TAATAATTAAGATGATATTC+AGG + Chr5:72828815-72828834 None:intergenic 15.0%
!! TGATAGATCTTAATTATTTA+GGG - Chr5:72828419-72828438 MsG0580028001.01.T01:intron 15.0%
!! TTAAAATTTAGTATTTGCAT+TGG - Chr5:72830695-72830714 MsG0580028001.01.T01:intron 15.0%
!! TTAATATGATACAAAAGATA+TGG + Chr5:72828788-72828807 None:intergenic 15.0%
!!! AATCCATAATTTTTATCTTA+CGG - Chr5:72829871-72829890 MsG0580028001.01.T01:intron 15.0%
!!! ATATTTTATATAGTAAAGTG+TGG - Chr5:72829772-72829791 MsG0580028001.01.T01:intron 15.0%
!! AACAAAAATAGTATAATTCG+GGG + Chr5:72828242-72828261 None:intergenic 20.0%
!! ATTATTGACAATGAAACTTA+TGG - Chr5:72830195-72830214 MsG0580028001.01.T01:intron 20.0%
!! CAATACTATATTAATTCACT+TGG - Chr5:72830132-72830151 MsG0580028001.01.T01:intron 20.0%
!! GAAATACGTAAATTTGAAAA+TGG - Chr5:72827934-72827953 MsG0580028001.01.T01:CDS 20.0%
!! GAAATATGAAAAATGTGTTT+AGG + Chr5:72830821-72830840 None:intergenic 20.0%
!! GAACAAAAATAGTATAATTC+GGG + Chr5:72828243-72828262 None:intergenic 20.0%
!! GTGATAGATCTTAATTATTT+AGG - Chr5:72828418-72828437 MsG0580028001.01.T01:intron 20.0%
!!! AGACATATTTTGAAAGAAAT+GGG - Chr5:72827974-72827993 MsG0580028001.01.T01:CDS 20.0%
!!! ATAATATTAAGGGATCTTTT+GGG + Chr5:72828753-72828772 None:intergenic 20.0%
!!! ATGATAGAATCATAGATTTT+AGG - Chr5:72827290-72827309 MsG0580028001.01.T01:CDS 20.0%
!!! GATATTTCATGTTTTATGTA+AGG - Chr5:72829805-72829824 MsG0580028001.01.T01:intron 20.0%
!!! TAATTTGAAATAAACTTGTG+AGG + Chr5:72828022-72828041 None:intergenic 20.0%
!!! TTATTTGTTGAAAGAAAAGA+GGG - Chr5:72829053-72829072 MsG0580028001.01.T01:intron 20.0%
!!! TTTATTGGTTAAAATCACTT+GGG - Chr5:72829934-72829953 MsG0580028001.01.T01:intron 20.0%
! AAATATATACCTCAGTTTAG+AGG + Chr5:72829758-72829777 None:intergenic 25.0%
! AAGGATGATATTACATTATC+AGG + Chr5:72828945-72828964 None:intergenic 25.0%
! AAGGTGTATAGAATTAGAAA+GGG - Chr5:72827355-72827374 MsG0580028001.01.T01:intron 25.0%
! AATATAGTATTGCACCTATA+AGG + Chr5:72830124-72830143 None:intergenic 25.0%
! AATATCGTAATTAAACTGCA+AGG + Chr5:72827672-72827691 None:intergenic 25.0%
! AATGTAATATCATCCTTTGT+GGG - Chr5:72828948-72828967 MsG0580028001.01.T01:intron 25.0%
! ACGCATGCTTAAAAATAAAA+GGG + Chr5:72827270-72827289 None:intergenic 25.0%
! ACTTCGTTAAAATTTCTAAG+AGG + Chr5:72828877-72828896 None:intergenic 25.0%
! AGTCCGTAAGATAAAAATTA+TGG + Chr5:72829877-72829896 None:intergenic 25.0%
! AGTTTCATTGTCAATAATAC+AGG + Chr5:72830193-72830212 None:intergenic 25.0%
! ATAATACATACATGATACAG+TGG - Chr5:72828338-72828357 MsG0580028001.01.T01:intron 25.0%
! GGTAGTGAATAAAAATTTCA+TGG + Chr5:72828924-72828943 None:intergenic 25.0%
! GTATTTAGACTTCTATTCAA+AGG - Chr5:72827225-72827244 MsG0580028001.01.T01:CDS 25.0%
! TAACTCAGGGATAATATTAA+GGG + Chr5:72828763-72828782 None:intergenic 25.0%
! TAAGTAAAATACCACTTTCT+TGG + Chr5:72826820-72826839 None:intergenic 25.0%
! TAATGTAATATCATCCTTTG+TGG - Chr5:72828947-72828966 MsG0580028001.01.T01:intron 25.0%
! TACAAAATGTTGTCAAATAG+CGG - Chr5:72829162-72829181 MsG0580028001.01.T01:intron 25.0%
! TACGCATGCTTAAAAATAAA+AGG + Chr5:72827271-72827290 None:intergenic 25.0%
! TGATCATTGAATCTGTTATT+AGG - Chr5:72827471-72827490 MsG0580028001.01.T01:intron 25.0%
! TTGTATTAAATAGTGTATCG+TGG + Chr5:72829147-72829166 None:intergenic 25.0%
! TTGTGTATTGTGTATATTCT+TGG - Chr5:72828665-72828684 MsG0580028001.01.T01:intron 25.0%
!! AAATGCTATAATGAGCATTT+TGG + Chr5:72827076-72827095 None:intergenic 25.0%
!! CTCTTTTCTTTCAACAAATA+AGG + Chr5:72829054-72829073 None:intergenic 25.0%
!! CTTATTTGTTGAAAGAAAAG+AGG - Chr5:72829052-72829071 MsG0580028001.01.T01:intron 25.0%
!! CTTTATTGGTTAAAATCACT+TGG - Chr5:72829933-72829952 MsG0580028001.01.T01:intron 25.0%
!! GATAATATTAAGGGATCTTT+TGG + Chr5:72828754-72828773 None:intergenic 25.0%
!! TTTTTGTTCTGTATCTTTGA+AGG - Chr5:72828254-72828273 MsG0580028001.01.T01:intron 25.0%
!!! AAGTTCTTATTGTTTTTCAC+CGG - Chr5:72827170-72827189 MsG0580028001.01.T01:CDS 25.0%
!!! GAGACATATTTTGAAAGAAA+TGG - Chr5:72827973-72827992 MsG0580028001.01.T01:CDS 25.0%
!!! TTATTTTTAACCAGCCTTAT+AGG - Chr5:72830107-72830126 MsG0580028001.01.T01:intron 25.0%
!!! TTGCATTTGCTATTTACTTT+TGG - Chr5:72830785-72830804 MsG0580028001.01.T01:CDS 25.0%
AAAAGATATGGTCTAACTCA+GGG + Chr5:72828776-72828795 None:intergenic 30.0%
ACAATATATACCAGTTTGCA+AGG - Chr5:72829648-72829667 MsG0580028001.01.T01:CDS 30.0%
ACATTACATACAATGTCAAG+TGG + Chr5:72828704-72828723 None:intergenic 30.0%
ACGATATTCCAGTAATTAGT+GGG - Chr5:72827684-72827703 MsG0580028001.01.T01:intron 30.0%
AGGTTGGCAAATTTCTAATT+CGG + Chr5:72827652-72827671 None:intergenic 30.0%
ATAGAAGTCTAAATACTCCA+CGG + Chr5:72827221-72827240 None:intergenic 30.0%
CAACAAATCATTGGAATCAA+AGG - Chr5:72829693-72829712 MsG0580028001.01.T01:intron 30.0%
CAGTGTTAAAGTGAAAACAT+AGG - Chr5:72828971-72828990 MsG0580028001.01.T01:intron 30.0%
CGCATGCTTAAAAATAAAAG+GGG + Chr5:72827269-72827288 None:intergenic 30.0%
CTAACTCAGGGATAATATTA+AGG + Chr5:72828764-72828783 None:intergenic 30.0%
GAAACCACTCTTAGAATATA+TGG - Chr5:72826782-72826801 MsG0580028001.01.T01:CDS 30.0%
GATCTATCACAAAAATGTCA+TGG + Chr5:72828408-72828427 None:intergenic 30.0%
GTTTGCAATTTCGATACATT+CGG + Chr5:72827427-72827446 None:intergenic 30.0%
TAACGATACTAACGAGAAAA+AGG + Chr5:72826851-72826870 None:intergenic 30.0%
TACACAATCAGCATAACAAA+AGG + Chr5:72828652-72828671 None:intergenic 30.0%
TACATTCTCCAACAAATCAT+TGG - Chr5:72829684-72829703 MsG0580028001.01.T01:CDS 30.0%
TACGATATTCCAGTAATTAG+TGG - Chr5:72827683-72827702 MsG0580028001.01.T01:intron 30.0%
TAGAGAAGAGAAATGATGAA+TGG + Chr5:72827862-72827881 None:intergenic 30.0%
TGATTCCACCAAATTCATAT+GGG + Chr5:72829977-72829996 None:intergenic 30.0%
TTAACCAATAAAGAGTGAGT+TGG + Chr5:72829926-72829945 None:intergenic 30.0%
TTCATCATGGTCATTATACT+TGG - Chr5:72828315-72828334 MsG0580028001.01.T01:intron 30.0%
TTGATTCCACCAAATTCATA+TGG + Chr5:72829978-72829997 None:intergenic 30.0%
TTTAATCATTGCCAATCTGT+AGG - Chr5:72830236-72830255 MsG0580028001.01.T01:CDS 30.0%
TTTGCAATTTCGATACATTC+GGG + Chr5:72827426-72827445 None:intergenic 30.0%
! ATGCTGATTGTGTATATTCA+CGG - Chr5:72828142-72828161 MsG0580028001.01.T01:intron 30.0%
! CTTTGATTCCAATGATTTGT+TGG + Chr5:72829695-72829714 None:intergenic 30.0%
! GAAGGTGTATAGAATTAGAA+AGG - Chr5:72827354-72827373 MsG0580028001.01.T01:intron 30.0%
!! ACATTTTGAAAAACATCGCA+CGG - Chr5:72829097-72829116 MsG0580028001.01.T01:intron 30.0%
!!! ATTGGCAACCATTTTTTGTT+GGG - Chr5:72827714-72827733 MsG0580028001.01.T01:intron 30.0%
AACTGGTATATATTGTGCCT+TGG + Chr5:72829644-72829663 None:intergenic 35.0%
AATAGTGTATCGTGGAACAA+TGG + Chr5:72829139-72829158 None:intergenic 35.0%
ACAATCAGCATAACAAAAGG+CGG + Chr5:72828649-72828668 None:intergenic 35.0%
ACCTGGACAGAATAAAATCA+AGG - Chr5:72830508-72830527 MsG0580028001.01.T01:intron 35.0%
ACTGGTATATATTGTGCCTT+GGG + Chr5:72829643-72829662 None:intergenic 35.0%
AGGGAGTTAATAGATAGAGA+AGG - Chr5:72828438-72828457 MsG0580028001.01.T01:intron 35.0%
AGTGTTAGTGCTATCAATTG+CGG + Chr5:72829241-72829260 None:intergenic 35.0%
ATAATTCGGGGATCTTATAC+AGG + Chr5:72828230-72828249 None:intergenic 35.0%
ATATGGGACTCATGAATTTG+TGG + Chr5:72829961-72829980 None:intergenic 35.0%
ATGCAAAACTCACAAAGACA+CGG + Chr5:72830771-72830790 None:intergenic 35.0%
ATTTAGGGATTCTTTCAGCA+TGG + Chr5:72827317-72827336 None:intergenic 35.0%
CAAAAGATATGGTCTAACTC+AGG + Chr5:72828777-72828796 None:intergenic 35.0%
CAACATACAATGTCAAGTGA+TGG - Chr5:72828845-72828864 MsG0580028001.01.T01:intron 35.0%
CACTTTCAAAGACCAAATTG+TGG + Chr5:72827384-72827403 None:intergenic 35.0%
CATTTGATGCAGAAAAGTCT+GGG - Chr5:72829575-72829594 MsG0580028001.01.T01:CDS 35.0%
CATTTGTATAAATGCCCTGT+TGG + Chr5:72828509-72828528 None:intergenic 35.0%
CCTGGACAGAATAAAATCAA+GGG - Chr5:72830509-72830528 MsG0580028001.01.T01:intron 35.0%
CTGATCATATCACAATGTAG+TGG - Chr5:72829293-72829312 MsG0580028001.01.T01:intron 35.0%
CTGGACAGAATAAAATCAAG+GGG - Chr5:72830510-72830529 MsG0580028001.01.T01:intron 35.0%
CTTTCCAACTCACTCTTTAT+TGG - Chr5:72829919-72829938 MsG0580028001.01.T01:intron 35.0%
GAAAGAATCCCTAAATGACA+GGG - Chr5:72827321-72827340 MsG0580028001.01.T01:CDS 35.0%
GGGAGTTAATAGATAGAGAA+GGG - Chr5:72828439-72828458 MsG0580028001.01.T01:intron 35.0%
GTGTGTTAGATTTAAGAGTG+AGG - Chr5:72829474-72829493 MsG0580028001.01.T01:intron 35.0%
TAATTCGGGGATCTTATACA+GGG + Chr5:72828229-72828248 None:intergenic 35.0%
TAGAAAGGGAAACCACAATT+TGG - Chr5:72827369-72827388 MsG0580028001.01.T01:intron 35.0%
TAGAAGTCTAAATACTCCAC+GGG + Chr5:72827220-72827239 None:intergenic 35.0%
TAGATTTAAGAGTGAGGTTG+TGG - Chr5:72829480-72829499 MsG0580028001.01.T01:intron 35.0%
TCATGAGTCCCATATGAATT+TGG - Chr5:72829966-72829985 MsG0580028001.01.T01:intron 35.0%
TCGTAATTAAACTGCAAGGT+TGG + Chr5:72827668-72827687 None:intergenic 35.0%
TCTTTCAGCAACTATGACTT+TGG + Chr5:72830415-72830434 None:intergenic 35.0%
TGAAAGAATCCCTAAATGAC+AGG - Chr5:72827320-72827339 MsG0580028001.01.T01:CDS 35.0%
TGCAATAGAATCGATGCAAT+AGG + Chr5:72826972-72826991 None:intergenic 35.0%
TGGTTCATTATGCACAAGTA+AGG + Chr5:72827056-72827075 None:intergenic 35.0%
TGTGATCTTATCCAAGAAAG+TGG - Chr5:72826806-72826825 MsG0580028001.01.T01:CDS 35.0%
TTAGTATTTGCATTGGATGC+AGG - Chr5:72830702-72830721 MsG0580028001.01.T01:intron 35.0%
TTATTCTTCTCTGATGAGCT+TGG - Chr5:72827773-72827792 MsG0580028001.01.T01:intron 35.0%
TTCTATACACCTTCCATATC+AGG + Chr5:72827348-72827367 None:intergenic 35.0%
TTGAAGTGTATCCCCATATT+CGG - Chr5:72830072-72830091 MsG0580028001.01.T01:intron 35.0%
TTGCAATTTCGATACATTCG+GGG + Chr5:72827425-72827444 None:intergenic 35.0%
TTTAGGGATTCTTTCAGCAT+GGG + Chr5:72827316-72827335 None:intergenic 35.0%
! AATTTTGCTCCTCTAAACTG+AGG - Chr5:72829746-72829765 MsG0580028001.01.T01:intron 35.0%
! ACAGCCATATATTCTAAGAG+TGG + Chr5:72826789-72826808 None:intergenic 35.0%
! TGACTGTTATTGATTGCATG+CGG - Chr5:72828475-72828494 MsG0580028001.01.T01:intron 35.0%
! TTCATCTATGCCATCTTTTC+TGG + Chr5:72826756-72826775 None:intergenic 35.0%
!! ATGTGAGAGTACTGAATCAA+AGG + Chr5:72828201-72828220 None:intergenic 35.0%
!! TCTTATTGTTTTTCACCGGA+TGG - Chr5:72827174-72827193 MsG0580028001.01.T01:CDS 35.0%
!! TGTGAGAGTACTGAATCAAA+GGG + Chr5:72828200-72828219 None:intergenic 35.0%
!! TTGGTTGGCTTCAAAATTAG+AGG - Chr5:72827126-72827145 MsG0580028001.01.T01:CDS 35.0%
!!! ATTTTTTGTTGGGTGTCTTG+CGG - Chr5:72827724-72827743 MsG0580028001.01.T01:intron 35.0%
!!! GATTGGCAACCATTTTTTGT+TGG - Chr5:72827713-72827732 MsG0580028001.01.T01:intron 35.0%
AAGAGGAACTGTAGTAGTCA+CGG + Chr5:72830847-72830866 None:intergenic 40.0%
AATAGACACGTTCTACCTCA+CGG - Chr5:72826706-72826725 MsG0580028001.01.T01:CDS 40.0%
AATTCACCCTCCAGAAAAGA+TGG - Chr5:72826743-72826762 MsG0580028001.01.T01:CDS 40.0%
ACATTCCAGGACCAAAATGA+CGG - Chr5:72827621-72827640 MsG0580028001.01.T01:intron 40.0%
ACCAACGAAAAACACATCTG+AGG + Chr5:72827510-72827529 None:intergenic 40.0%
ACTCGTCAAGAGAGAAAGAT+CGG - Chr5:72830867-72830886 MsG0580028001.01.T01:CDS 40.0%
ACTGTGGGAGTAATGAATCA+TGG + Chr5:72828730-72828749 None:intergenic 40.0%
AGAATAAAATCAAGGGGTCG+TGG - Chr5:72830516-72830535 MsG0580028001.01.T01:intron 40.0%
AGGATCATGGTCATCATTCT+AGG - Chr5:72830604-72830623 MsG0580028001.01.T01:CDS 40.0%
AGGGTATGTATAGTGTCAAG+TGG + Chr5:72828181-72828200 None:intergenic 40.0%
AGGTTCAAACTCAAGGATCA+TGG - Chr5:72830591-72830610 MsG0580028001.01.T01:intron 40.0%
ATCATTGGAATCAAAGGCGA+TGG - Chr5:72829699-72829718 MsG0580028001.01.T01:intron 40.0%
ATTGCAAGAAGTCGTTTGCA+CGG - Chr5:72826986-72827005 MsG0580028001.01.T01:CDS 40.0%
CCAGTTTGGATGTTTCATCA+TGG - Chr5:72828302-72828321 MsG0580028001.01.T01:intron 40.0%
CCATGATGAAACATCCAAAC+TGG + Chr5:72828305-72828324 None:intergenic 40.0%
CTTGGAATCTGGCTAATGAT+AGG - Chr5:72828083-72828102 MsG0580028001.01.T01:CDS 40.0%
GCAAGACACCCAACAAAAAA+TGG + Chr5:72827725-72827744 None:intergenic 40.0%
GCATTTGATGCAGAAAAGTC+TGG - Chr5:72829574-72829593 MsG0580028001.01.T01:CDS 40.0%
TAAATGACAGGGACCTGATA+TGG - Chr5:72827332-72827351 MsG0580028001.01.T01:intron 40.0%
TAGTATTGCACCTATAAGGC+TGG + Chr5:72830120-72830139 None:intergenic 40.0%
TATACCAGTTTGCAAGGATG+AGG - Chr5:72829654-72829673 MsG0580028001.01.T01:CDS 40.0%
TATCAGGGCTTAGTCACTTA+TGG - Chr5:72827804-72827823 MsG0580028001.01.T01:intron 40.0%
TGAGTCCCATATGAATTTGG+TGG - Chr5:72829969-72829988 MsG0580028001.01.T01:intron 40.0%
TGCAATGCATTCGCTTTAGT+TGG - Chr5:72826900-72826919 MsG0580028001.01.T01:intron 40.0%
TGTGGTCTGTCACACAATTA+AGG + Chr5:72826929-72826948 None:intergenic 40.0%
TTACCTCTATAGTCTTCCCA+AGG - Chr5:72829624-72829643 MsG0580028001.01.T01:CDS 40.0%
TTGAAACTCCTCCAGAATTG+AGG - Chr5:72828053-72828072 MsG0580028001.01.T01:CDS 40.0%
TTGTGGAACATCCTACAGAT+TGG + Chr5:72830250-72830269 None:intergenic 40.0%
TTTCTCTCTTGACGAGTAAG+AGG + Chr5:72830864-72830883 None:intergenic 40.0%
! ATATCAGGTCCCTGTCATTT+AGG + Chr5:72827333-72827352 None:intergenic 40.0%
! ATCTATGCCATCTTTTCTGG+AGG + Chr5:72826753-72826772 None:intergenic 40.0%
! ATTCGGACAAACCGTCATTT+TGG + Chr5:72827635-72827654 None:intergenic 40.0%
! CAATTCTGGAGGAGTTTCAA+GGG + Chr5:72828053-72828072 None:intergenic 40.0%
! CCCTTGATTTTATTCTGTCC+AGG + Chr5:72830512-72830531 None:intergenic 40.0%
! CTTTGAAGGTTTGCTTCCAT+TGG - Chr5:72828268-72828287 MsG0580028001.01.T01:intron 40.0%
! TAATTAGTGGGTAGTCGGAT+TGG - Chr5:72827696-72827715 MsG0580028001.01.T01:intron 40.0%
! TATCAGGTCCCTGTCATTTA+GGG + Chr5:72827332-72827351 None:intergenic 40.0%
! TCAATTCTGGAGGAGTTTCA+AGG + Chr5:72828054-72828073 None:intergenic 40.0%
! TCCAGTAATTAGTGGGTAGT+CGG - Chr5:72827691-72827710 MsG0580028001.01.T01:intron 40.0%
! TCCTCAGATGTGTTTTTCGT+TGG - Chr5:72827506-72827525 MsG0580028001.01.T01:intron 40.0%
! TCTATGCCATCTTTTCTGGA+GGG + Chr5:72826752-72826771 None:intergenic 40.0%
! TTTTGGTCCTGGAATGTATG+AGG + Chr5:72827618-72827637 None:intergenic 40.0%
!! AGAACTTGTCTCGCTTTTCT+AGG + Chr5:72827157-72827176 None:intergenic 40.0%
!! AGCTTGGCTTTGGTATATCA+GGG - Chr5:72827789-72827808 MsG0580028001.01.T01:intron 40.0%
!! ATTGACTTGAGTAGCAGCAA+GGG - Chr5:72830330-72830349 MsG0580028001.01.T01:CDS 40.0%
!! GAACTTGTCTCGCTTTTCTA+GGG + Chr5:72827156-72827175 None:intergenic 40.0%
!! TATTGACTTGAGTAGCAGCA+AGG - Chr5:72830329-72830348 MsG0580028001.01.T01:CDS 40.0%
AAGTGTATCCCCATATTCGG+CGG - Chr5:72830075-72830094 MsG0580028001.01.T01:intron 45.0%
AGCATCGTTCAGCTTATCAC+TGG + Chr5:72830373-72830392 None:intergenic 45.0%
AGCTGAGAGGTTCAAACTCA+AGG - Chr5:72830584-72830603 MsG0580028001.01.T01:intron 45.0%
ATCATTCTAGGCAGAGAGCA+AGG - Chr5:72830616-72830635 MsG0580028001.01.T01:CDS 45.0%
ATCCAAATCCGATCGTAGAG+TGG - Chr5:72830461-72830480 MsG0580028001.01.T01:CDS 45.0%
ATGCGGTTATGTCTCCAACA+GGG - Chr5:72828492-72828511 MsG0580028001.01.T01:intron 45.0%
ATTGTGTGACAGACCACAAG+CGG - Chr5:72826931-72826950 MsG0580028001.01.T01:intron 45.0%
CAAGCTTCTTGCCTCAATTC+TGG + Chr5:72828067-72828086 None:intergenic 45.0%
CACTTTAACACTGCCCACAA+AGG + Chr5:72828964-72828983 None:intergenic 45.0%
CAGAATTGAGGCAAGAAGCT+TGG - Chr5:72828065-72828084 MsG0580028001.01.T01:CDS 45.0%
GACATTGCCTCATACATTCC+AGG - Chr5:72827608-72827627 MsG0580028001.01.T01:intron 45.0%
GATTCATACCATGCGACGAA+TGG + Chr5:72830749-72830768 None:intergenic 45.0%
GTGATAAGCTGAACGATGCT+AGG - Chr5:72830373-72830392 MsG0580028001.01.T01:CDS 45.0%
GTTTGCACGGTTCAATGTCA+AGG - Chr5:72826999-72827018 MsG0580028001.01.T01:CDS 45.0%
GTTTGCTTCCATTGGAGTCT+TGG - Chr5:72828276-72828295 MsG0580028001.01.T01:intron 45.0%
TCATTCTAGGCAGAGAGCAA+GGG - Chr5:72830617-72830636 MsG0580028001.01.T01:CDS 45.0%
TCCGACTACCCACTAATTAC+TGG + Chr5:72827695-72827714 None:intergenic 45.0%
TGAAAAACATCGCACGGTCT+AGG - Chr5:72829103-72829122 MsG0580028001.01.T01:intron 45.0%
TGCAGCATATACAACTCCAC+AGG + Chr5:72829506-72829525 None:intergenic 45.0%
TGGGATTGATGAAGTCTGCA+GGG - Chr5:72829594-72829613 MsG0580028001.01.T01:CDS 45.0%
TTCTCTGATGAGCTTGGCTT+TGG - Chr5:72827779-72827798 MsG0580028001.01.T01:intron 45.0%
TTGTATATGCTGCAGCTCGT+AGG - Chr5:72829512-72829531 MsG0580028001.01.T01:CDS 45.0%
TTGTTAACTGCTCATCCGTG+AGG + Chr5:72826724-72826743 None:intergenic 45.0%
! GTGCTATCAATTGCGGATTG+CGG + Chr5:72829234-72829253 None:intergenic 45.0%
! TGATGAAGTCTGCAGGGTTT+TGG - Chr5:72829600-72829619 MsG0580028001.01.T01:CDS 45.0%
! TGCTATCAATTGCGGATTGC+GGG + Chr5:72829233-72829252 None:intergenic 45.0%
! TTCATTGGGGAGCTACTTTG+TGG + Chr5:72830267-72830286 None:intergenic 45.0%
! TTTTTCACCGGATGGAATGC+AGG - Chr5:72827182-72827201 MsG0580028001.01.T01:CDS 45.0%
!! ACAAACCGTCATTTTGGTCC+TGG + Chr5:72827629-72827648 None:intergenic 45.0%
!! GAGCTTGGCTTTGGTATATC+AGG - Chr5:72827788-72827807 MsG0580028001.01.T01:intron 45.0%
!!! AAGGGATCTTTTGGGACTGT+GGG + Chr5:72828745-72828764 None:intergenic 45.0%
!!! TAAGGGATCTTTTGGGACTG+TGG + Chr5:72828746-72828765 None:intergenic 45.0%
AAGCATGACTCCGCCGAATA+TGG + Chr5:72830088-72830107 None:intergenic 50.0%
AAGTTGCCGCAAGCTGTGTT+TGG - Chr5:72827107-72827126 MsG0580028001.01.T01:CDS 50.0%
ACTGGACACCAAGACTCCAA+TGG + Chr5:72828287-72828306 None:intergenic 50.0%
AGCATGACTCCGCCGAATAT+GGG + Chr5:72830087-72830106 None:intergenic 50.0%
AGCCAACCAAACACAGCTTG+CGG + Chr5:72827116-72827135 None:intergenic 50.0%
CAAATCCGATCGTAGAGTGG+AGG - Chr5:72830464-72830483 MsG0580028001.01.T01:CDS 50.0%
CAAATGCCTTCCACCATGGT+GGG + Chr5:72829561-72829580 None:intergenic 50.0%
CATGCGGTTATGTCTCCAAC+AGG - Chr5:72828491-72828510 MsG0580028001.01.T01:intron 50.0%
CTCCACTCTACGATCGGATT+TGG + Chr5:72830466-72830485 None:intergenic 50.0%
CTGGCGTCTCAGCATTCATT+GGG + Chr5:72830281-72830300 None:intergenic 50.0%
CTGGGATTGATGAAGTCTGC+AGG - Chr5:72829593-72829612 MsG0580028001.01.T01:CDS 50.0%
GAGGCAAGAAGCTTGGAATC+TGG - Chr5:72828072-72828091 MsG0580028001.01.T01:CDS 50.0%
GAGTCCTCATCCTTGCAAAC+TGG + Chr5:72829661-72829680 None:intergenic 50.0%
GCATCAAATGCCTTCCACCA+TGG + Chr5:72829565-72829584 None:intergenic 50.0%
GCTTCTTGCCTCAATTCTGG+AGG + Chr5:72828064-72828083 None:intergenic 50.0%
GTGCCTTGGGAAGACTATAG+AGG + Chr5:72829630-72829649 None:intergenic 50.0%
TCAAAACGCCATTCGTCGCA+TGG - Chr5:72830738-72830757 MsG0580028001.01.T01:intron 50.0%
TCAAATGCCTTCCACCATGG+TGG + Chr5:72829562-72829581 None:intergenic 50.0%
TCGGGGATCTTATACAGGGA+TGG + Chr5:72828225-72828244 None:intergenic 50.0%
TGACAGGGACCTGATATGGA+AGG - Chr5:72827336-72827355 MsG0580028001.01.T01:intron 50.0%
TGGCGTCTCAGCATTCATTG+GGG + Chr5:72830280-72830299 None:intergenic 50.0%
TTCTTCGCGTGCTCCCTTTA+GGG + Chr5:72830304-72830323 None:intergenic 50.0%
! CAATTGCGGATTGCGGGAAA+TGG + Chr5:72829227-72829246 None:intergenic 50.0%
! TTCTGGAGGAGTTTCAAGGG+TGG + Chr5:72828050-72828069 None:intergenic 50.0%
!! TGGAGTCTTGGTGTCCAGTT+TGG - Chr5:72828288-72828307 MsG0580028001.01.T01:intron 50.0%
AAATCAAGGGGTCGTGGTCG+AGG - Chr5:72830522-72830541 MsG0580028001.01.T01:intron 55.0%
AAGAGTGAGGTTGTGGCCTG+TGG - Chr5:72829487-72829506 MsG0580028001.01.T01:intron 55.0%
AGAGGCCTCCACTCTACGAT+CGG + Chr5:72830472-72830491 None:intergenic 55.0%
AGGCAGAGAGCAAGGGAATC+AGG - Chr5:72830624-72830643 MsG0580028001.01.T01:CDS 55.0%
CTTCTAGCCATGACCGCTTG+TGG + Chr5:72826947-72826966 None:intergenic 55.0%
CTTCTTCGCGTGCTCCCTTT+AGG + Chr5:72830305-72830324 None:intergenic 55.0%
GAGGAGTTTCAAGGGTGGCA+AGG + Chr5:72828045-72828064 None:intergenic 55.0%
GCATGACTCCGCCGAATATG+GGG + Chr5:72830086-72830105 None:intergenic 55.0%
GCTGGCGTCTCAGCATTCAT+TGG + Chr5:72830282-72830301 None:intergenic 55.0%
TCACCGGATGGAATGCAGGA+GGG - Chr5:72827186-72827205 MsG0580028001.01.T01:CDS 55.0%
TCTCCCTCCTGCATTCCATC+CGG + Chr5:72827192-72827211 None:intergenic 55.0%
TGACAGACCACAAGCGGTCA+TGG - Chr5:72826937-72826956 MsG0580028001.01.T01:intron 55.0%
TGCCGCAAGCTGTGTTTGGT+TGG - Chr5:72827111-72827130 MsG0580028001.01.T01:CDS 55.0%
TTCACCGGATGGAATGCAGG+AGG - Chr5:72827185-72827204 MsG0580028001.01.T01:CDS 55.0%
TTCCTGAGAACCCACCATGG+TGG - Chr5:72829548-72829567 MsG0580028001.01.T01:CDS 55.0%
TTGGGTGTCTTGCGGAGTTG+CGG - Chr5:72827732-72827751 MsG0580028001.01.T01:intron 55.0%
! TGAGAACCCACCATGGTGGA+AGG - Chr5:72829552-72829571 MsG0580028001.01.T01:CDS 55.0%
! TTGCGGATTGCGGGAAATGG+TGG + Chr5:72829224-72829243 None:intergenic 55.0%
!! ACCATGGTGGGTTCTCAGGA+AGG + Chr5:72829549-72829568 None:intergenic 55.0%
!! CATGGTGGGTTCTCAGGAAG+GGG + Chr5:72829547-72829566 None:intergenic 55.0%
!! CCATGGTGGGTTCTCAGGAA+GGG + Chr5:72829548-72829567 None:intergenic 55.0%
!! GAGTAGCAGCAAGGGTGCTT+TGG - Chr5:72830338-72830357 MsG0580028001.01.T01:CDS 55.0%
!! TTCCACCATGGTGGGTTCTC+AGG + Chr5:72829553-72829572 None:intergenic 55.0%
AAGGGGTCGTGGTCGAGGAA+GGG - Chr5:72830527-72830546 MsG0580028001.01.T01:intron 60.0%
CCCTTCCTGAGAACCCACCA+TGG - Chr5:72829545-72829564 MsG0580028001.01.T01:CDS 60.0%
GATCGTAGAGTGGAGGCCTC+TGG - Chr5:72830471-72830490 MsG0580028001.01.T01:CDS 60.0%
GCTGAGACGCCAGCCCTAAA+GGG - Chr5:72830288-72830307 MsG0580028001.01.T01:CDS 60.0%
GTCCCTGCGTAAGTCTCCAG+AGG + Chr5:72830490-72830509 None:intergenic 60.0%
GTGAGCGAGAGGAAGCTGAG+AGG - Chr5:72830571-72830590 MsG0580028001.01.T01:intron 60.0%
TGAACGTGAGCGTGAGCGAG+AGG - Chr5:72830560-72830579 MsG0580028001.01.T01:intron 60.0%
TGCTGAGACGCCAGCCCTAA+AGG - Chr5:72830287-72830306 MsG0580028001.01.T01:CDS 60.0%
TGGAGACTTACGCAGGGACC+TGG - Chr5:72830491-72830510 MsG0580028001.01.T01:intron 60.0%
! AGGCCTCTGGAGACTTACGC+AGG - Chr5:72830484-72830503 MsG0580028001.01.T01:intron 60.0%
! GGCCTCTGGAGACTTACGCA+GGG - Chr5:72830485-72830504 MsG0580028001.01.T01:intron 60.0%
CAAGGGGTCGTGGTCGAGGA+AGG - Chr5:72830526-72830545 MsG0580028001.01.T01:intron 65.0%
CAGGAGGGAGAACTTGCCCG+TGG - Chr5:72827201-72827220 MsG0580028001.01.T01:CDS 65.0%
!! TCGCGTGCTCCCTTTAGGGC+TGG + Chr5:72830300-72830319 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 72826692 72830914 72826692 ID=MsG0580028001.01;Name=MsG0580028001.01
Chr5 mRNA 72826692 72830914 72826692 ID=MsG0580028001.01.T01;Parent=MsG0580028001.01;Name=MsG0580028001.01.T01;_AED=0.44;_eAED=0.57;_QI=0|0.5|0.28|1|0.83|0.57|7|0|525
Chr5 exon 72830779 72830914 72830779 ID=MsG0580028001.01.T01:exon:7370;Parent=MsG0580028001.01.T01
Chr5 exon 72830599 72830687 72830599 ID=MsG0580028001.01.T01:exon:7369;Parent=MsG0580028001.01.T01
Chr5 exon 72830196 72830500 72830196 ID=MsG0580028001.01.T01:exon:7368;Parent=MsG0580028001.01.T01
Chr5 exon 72829502 72829708 72829502 ID=MsG0580028001.01.T01:exon:7367;Parent=MsG0580028001.01.T01
Chr5 exon 72827886 72828147 72827886 ID=MsG0580028001.01.T01:exon:7366;Parent=MsG0580028001.01.T01
Chr5 exon 72826961 72827348 72826961 ID=MsG0580028001.01.T01:exon:7365;Parent=MsG0580028001.01.T01
Chr5 exon 72826692 72826882 72826692 ID=MsG0580028001.01.T01:exon:7364;Parent=MsG0580028001.01.T01
Chr5 CDS 72830779 72830914 72830779 ID=MsG0580028001.01.T01:cds;Parent=MsG0580028001.01.T01
Chr5 CDS 72830599 72830687 72830599 ID=MsG0580028001.01.T01:cds;Parent=MsG0580028001.01.T01
Chr5 CDS 72830196 72830500 72830196 ID=MsG0580028001.01.T01:cds;Parent=MsG0580028001.01.T01
Chr5 CDS 72829502 72829708 72829502 ID=MsG0580028001.01.T01:cds;Parent=MsG0580028001.01.T01
Chr5 CDS 72827886 72828147 72827886 ID=MsG0580028001.01.T01:cds;Parent=MsG0580028001.01.T01
Chr5 CDS 72826961 72827348 72826961 ID=MsG0580028001.01.T01:cds;Parent=MsG0580028001.01.T01
Chr5 CDS 72826692 72826882 72826692 ID=MsG0580028001.01.T01:cds;Parent=MsG0580028001.01.T01
Gene Sequence

>MsG0580028001.01.T01

ATGATCTACGCAGCAATAGACACGTTCTACCTCACGGATGAGCAGTTAACAAATTCACCCTCCAGAAAAGATGGCATAGATGAAGCTACTGAAACCACTCTTAGAATATATGGCTGTGATCTTATCCAAGAAAGTGTTGGTTACCTTAATTGTGTGACAGACCACAAGCGGTCATGGCTAGAAGATCCTATTGCATCGATTCTATTGCAAGAAGTCGTTTGCACGAAAGTTGCCGCAAGCTGTGTTTGGTTGGCTTCAAAATTAGAGGAAAACCCTAGAAAAGCGAGACAAGTTCTTATTGTTTTTCACCGGATGGAATGCAGGAGGGAGAACTTGCCCGTGGAGTATTTAGACTTCTATTCAAAGGTTCAAAGCTCACATTTTTCCCCTTTTATTTTTAAGCATGCGTATGATAGAATCATAGATTTTAGGCCCATGCTGAAAGAATCCCTAAATGACAGGGACCTGATATGGAAGGTGTATAGAATTAGAAAGGGAAACCACAATTTGGTCTTTGAAAGTGTAACTTATTATTTGTTTGATTTTGTTTTCTCTTTTGTTGAACAGAAATACGTAAATTTGAAAATGGAACTGAGCAGAACAGAGAGACATATTTTGAAAGAAATGGGATTTATTTGTCATGTTGAACATCCTCACAAGTTTATTTCAAATTACCTTGCCACCCTTGAAACTCCTCCAGAATTGAGGCAAGAAGCTTGGAATCTGGCTAATGATAGTTTGCGCACTTCATTGTGTGTTAGATTTAAGAGTGAGGTTGTGGCCTGTGGAGTTGTATATGCTGCAGCTCGTAGGTTTCAAGTACCCCTTCCTGAGAACCCACCATGGTGGAAGGCATTTGATGCAGAAAAGTCTGGGATTGATGAAGTCTGCAGGGTTTTGGCTTACCTCTATAGTCTTCCCAAGGCACAATATATACCAGTTTGCAAGGATGAGGACTCATTTACATTCTCCAACAAATCATTGGAATCAAAGGCGATGGATGTTCCACAAAGTAGCTCCCCAATGAATGCTGAGACGCCAGCCCTAAAGGGAGCACGCGAAGAAGCTAATATTGACTTGAGTAGCAGCAAGGGTGCTTTGGTAAAGCAAACCAGTGATAAGCTGAACGATGCTAGGAAGTCTGATGATGAATCCAAAGTCATAGTTGCTGAAAGAGATGTAAAAGATGAACTCACATTCAAATCCAAATCCGATCGTAGAGTGGAGGCCTCTGGAGACTTACGCAGGGACCTGGACAGAATAAAATCAAGGGGTCGTGGTCGAGGAAGGGATTCTGATAATGAACGTGAGCGTGAGCGAGAGGAAGCTGAGAGGTTCAAACTCAAGGATCATGGTCATCATTCTAGGCAGAGAGCAAGGGAATCAGGACACTCAGAGAAGTCAAAACGCCATTCGTCGCATGGTATGAATCCGTGTCTTTGTGAGTTTTGCATTTGCTATTTACTTTTGGTGTATAATTTCCTAAACACATTTTTCATATTTCAGACCGTGACTACTACAGTTCCTCTTACTCGTCAAGAGAGAAAGATCGGCATAGACATCATTGACATAACTTAG
Protein sequence

>MsG0580028001.01.T01

MIYAAIDTFYLTDEQLTNSPSRKDGIDEATETTLRIYGCDLIQESVGYLNCVTDHKRSWLEDPIASILLQEVVCTKVAASCVWLASKLEENPRKARQVLIVFHRMECRRENLPVEYLDFYSKVQSSHFSPFIFKHAYDRIIDFRPMLKESLNDRDLIWKVYRIRKGNHNLVFESVTYYLFDFVFSFVEQKYVNLKMELSRTERHILKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLANDSLRTSLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDAEKSGIDEVCRVLAYLYSLPKAQYIPVCKDEDSFTFSNKSLESKAMDVPQSSSPMNAETPALKGAREEANIDLSSSKGALVKQTSDKLNDARKSDDESKVIVAERDVKDELTFKSKSDRRVEASGDLRRDLDRIKSRGRGRGRDSDNEREREREEAERFKLKDHGHHSRQRARESGHSEKSKRHSSHGMNPCLCEFCICYLLLVYNFLNTFFIFQTVTTTVPLTRQERKIGIDIIDIT*