Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015778.01.T01 | AES71467.2 | 81.069 | 449 | 24 | 3 | 1 | 448 | 1 | 389 | 0 | 691 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048463.01 | MsG0380015778.01 | 0.803285 | 3.749141e-49 | 1.876594e-46 |
| MsG0080048826.01 | MsG0380015778.01 | 0.800157 | 1.644138e-48 | 7.600812e-46 |
| MsG0180000777.01 | MsG0380015778.01 | 0.851657 | 7.692471e-61 | 1.567913e-57 |
| MsG0180001063.01 | MsG0380015778.01 | 0.812388 | 4.348553e-51 | 2.761178e-48 |
| MsG0180001886.01 | MsG0380015778.01 | 0.810501 | 1.117279e-50 | 6.745894e-48 |
| MsG0180002459.01 | MsG0380015778.01 | 0.824550 | 7.595636e-54 | 6.750096e-51 |
| MsG0180003189.01 | MsG0380015778.01 | 0.804019 | 2.640299e-49 | 1.346810e-46 |
| MsG0180003510.01 | MsG0380015778.01 | 0.815075 | 1.113050e-51 | 7.597795e-49 |
| MsG0180003673.01 | MsG0380015778.01 | 0.809647 | 1.706431e-50 | 1.007525e-47 |
| MsG0180003686.01 | MsG0380015778.01 | 0.806614 | 7.551130e-50 | 4.116907e-47 |
| MsG0180003952.01 | MsG0380015778.01 | 0.808658 | 2.779233e-50 | 1.598186e-47 |
| MsG0180004389.01 | MsG0380015778.01 | 0.805885 | 1.075389e-49 | 5.755283e-47 |
| MsG0180004928.01 | MsG0380015778.01 | 0.802246 | 6.144493e-49 | 2.995271e-46 |
| MsG0180005193.01 | MsG0380015778.01 | 0.813165 | 2.939094e-51 | 1.904959e-48 |
| MsG0180005799.01 | MsG0380015778.01 | 0.825793 | 3.861447e-54 | 3.555611e-51 |
| MsG0180005990.01 | MsG0380015778.01 | 0.835060 | 2.090477e-56 | 2.527318e-53 |
| MsG0280006299.01 | MsG0380015778.01 | 0.804591 | 2.006696e-49 | 1.038753e-46 |
| MsG0280006309.01 | MsG0380015778.01 | 0.807086 | 6.000343e-50 | 3.311559e-47 |
| MsG0280010722.01 | MsG0380015778.01 | 0.833303 | 5.761667e-56 | 6.608838e-53 |
| MsG0280011109.01 | MsG0380015778.01 | 0.817741 | 2.817000e-52 | 2.068700e-49 |
| MsG0280011175.01 | MsG0380015778.01 | 0.815058 | 1.123127e-51 | 7.662848e-49 |
| MsG0380011581.01 | MsG0380015778.01 | 0.804785 | 1.828079e-49 | 9.510756e-47 |
| MsG0380011669.01 | MsG0380015778.01 | 0.816514 | 5.317779e-52 | 3.775858e-49 |
| MsG0380011895.01 | MsG0380015778.01 | 0.810927 | 9.037914e-51 | 5.519805e-48 |
| MsG0380014173.01 | MsG0380015778.01 | 0.818851 | 1.579629e-52 | 1.196050e-49 |
| MsG0380014248.01 | MsG0380015778.01 | 0.808172 | 3.528881e-50 | 2.003775e-47 |
| MsG0380014277.01 | MsG0380015778.01 | 0.810218 | 1.285951e-50 | 7.706345e-48 |
| MsG0380014296.01 | MsG0380015778.01 | 0.837225 | 5.892356e-57 | 7.603607e-54 |
| MsG0380014537.01 | MsG0380015778.01 | 0.800338 | 1.510461e-48 | 7.015412e-46 |
| MsG0380015778.01 | MsG0380016133.01 | 0.841575 | 4.371654e-58 | 6.451087e-55 |
| MsG0380015778.01 | MsG0380016285.01 | 0.820391 | 7.030089e-53 | 5.555760e-50 |
| MsG0380015778.01 | MsG0380016560.01 | 0.801652 | 8.139214e-49 | 3.907911e-46 |
| MsG0380015778.01 | MsG0380017176.01 | 0.810271 | 1.252568e-50 | 7.517010e-48 |
| MsG0380015778.01 | MsG0380017238.01 | 0.803968 | 2.705893e-49 | 1.378454e-46 |
| MsG0380015778.01 | MsG0380017326.01 | 0.805713 | 1.169010e-49 | 6.228893e-47 |
| MsG0380015778.01 | MsG0380017543.01 | 0.860220 | 2.403467e-63 | 6.520905e-60 |
| MsG0380015778.01 | MsG0380017891.01 | -0.807828 | 4.176466e-50 | 2.349927e-47 |
| MsG0380015778.01 | MsG0380018044.01 | 0.806695 | 7.260939e-50 | 3.966937e-47 |
| MsG0380015778.01 | MsG0480018214.01 | 0.806341 | 8.622992e-50 | 4.668638e-47 |
| MsG0380015778.01 | MsG0480018236.01 | 0.824289 | 8.747554e-54 | 7.714707e-51 |
| MsG0380015778.01 | MsG0480018425.01 | 0.808394 | 3.165085e-50 | 1.807668e-47 |
| MsG0380015778.01 | MsG0480018883.01 | 0.803915 | 2.774999e-49 | 1.411812e-46 |
| MsG0380015778.01 | MsG0480020447.01 | 0.815788 | 7.726354e-52 | 5.378537e-49 |
| MsG0380015778.01 | MsG0480021280.01 | 0.800685 | 1.283592e-48 | 6.014189e-46 |
| MsG0380015778.01 | MsG0480021465.01 | 0.805523 | 1.280908e-49 | 6.791338e-47 |
| MsG0380015778.01 | MsG0480021558.01 | 0.805012 | 1.639330e-49 | 8.578435e-47 |
| MsG0380015778.01 | MsG0480021750.01 | 0.835963 | 1.235314e-56 | 1.534527e-53 |
| MsG0380015778.01 | MsG0480021959.01 | 0.851043 | 1.147574e-60 | 2.292967e-57 |
| MsG0380015778.01 | MsG0480022068.01 | 0.820268 | 7.504320e-53 | 5.909837e-50 |
| MsG0380015778.01 | MsG0480022711.01 | 0.801196 | 1.009210e-48 | 4.790264e-46 |
| MsG0380015778.01 | MsG0480023357.01 | 0.811983 | 5.328755e-51 | 3.346572e-48 |
| MsG0380015778.01 | MsG0480023660.01 | 0.806008 | 1.013131e-49 | 5.439291e-47 |
| MsG0380015778.01 | MsG0480023994.01 | 0.832175 | 1.098276e-55 | 1.217981e-52 |
| MsG0380015778.01 | MsG0580024495.01 | 0.806600 | 7.602148e-50 | 4.143297e-47 |
| MsG0380015778.01 | MsG0580025467.01 | 0.828633 | 8.067145e-55 | 8.063901e-52 |
| MsG0380015778.01 | MsG0580025758.01 | 0.801962 | 7.030277e-49 | 3.402105e-46 |
| MsG0380015778.01 | MsG0580026086.01 | 0.822142 | 2.775515e-53 | 2.303504e-50 |
| MsG0380015778.01 | MsG0580026340.01 | 0.836994 | 6.750562e-57 | 8.651082e-54 |
| MsG0380015778.01 | MsG0580028001.01 | 0.816736 | 4.740938e-52 | 3.386788e-49 |
| MsG0380015778.01 | MsG0580029376.01 | 0.822846 | 1.903757e-53 | 1.612085e-50 |
| MsG0380015778.01 | MsG0580029514.01 | -0.823350 | 1.452405e-53 | 1.247352e-50 |
| MsG0380015778.01 | MsG0680030413.01 | 0.836092 | 1.145978e-56 | 1.429292e-53 |
| MsG0380015778.01 | MsG0680030415.01 | 0.826172 | 3.138190e-54 | 2.920907e-51 |
| MsG0380015778.01 | MsG0680031334.01 | 0.805914 | 1.060391e-49 | 5.679225e-47 |
| MsG0380015778.01 | MsG0680031361.01 | 0.812215 | 4.742569e-51 | 2.997455e-48 |
| MsG0380015778.01 | MsG0680031468.01 | 0.820009 | 8.599763e-53 | 6.724400e-50 |
| MsG0380015778.01 | MsG0680031708.01 | 0.825151 | 5.481482e-54 | 4.955965e-51 |
| MsG0380015778.01 | MsG0680031815.01 | 0.810577 | 1.075581e-50 | 6.507556e-48 |
| MsG0380015778.01 | MsG0680033459.01 | 0.805757 | 1.144376e-49 | 6.104550e-47 |
| MsG0380015778.01 | MsG0780035957.01 | 0.808382 | 3.182755e-50 | 1.817234e-47 |
| MsG0380015778.01 | MsG0780036288.01 | 0.812506 | 4.097099e-51 | 2.609740e-48 |
| MsG0380015778.01 | MsG0780038636.01 | 0.803727 | 3.037195e-49 | 1.537618e-46 |
| MsG0380015778.01 | MsG0780039143.01 | 0.847796 | 9.216829e-60 | 1.656993e-56 |
| MsG0380015778.01 | MsG0780039144.01 | 0.859898 | 3.007172e-63 | 8.069081e-60 |
| MsG0380015778.01 | MsG0780040888.01 | 0.823058 | 1.699406e-53 | 1.447695e-50 |
| MsG0380015778.01 | MsG0780041187.01 | 0.800957 | 1.129557e-48 | 5.329401e-46 |
| MsG0380015778.01 | MsG0780041261.01 | 0.836732 | 7.877482e-57 | 1.001535e-53 |
| MsG0380015778.01 | MsG0780041416.01 | 0.820502 | 6.630272e-53 | 5.255345e-50 |
| MsG0380015778.01 | MsG0780041491.01 | 0.808898 | 2.470392e-50 | 1.429549e-47 |
| MsG0380015778.01 | MsG0780041507.01 | 0.814806 | 1.277316e-51 | 8.656200e-49 |
| MsG0380015778.01 | MsG0880042108.01 | 0.815612 | 8.456964e-52 | 5.859034e-49 |
| MsG0380015778.01 | MsG0880042622.01 | 0.822992 | 1.760404e-53 | 1.496830e-50 |
| MsG0380015778.01 | MsG0880042700.01 | 0.804055 | 2.595839e-49 | 1.325374e-46 |
| MsG0380015778.01 | MsG0880043454.01 | 0.833034 | 6.724385e-56 | 7.651222e-53 |
| MsG0380015778.01 | MsG0880043509.01 | 0.813466 | 2.523155e-51 | 1.649086e-48 |
| MsG0380015778.01 | MsG0880044394.01 | 0.821472 | 3.965265e-53 | 3.228943e-50 |
| MsG0380015778.01 | MsG0880044728.01 | 0.828733 | 7.630445e-55 | 7.648905e-52 |
| MsG0380015778.01 | MsG0880045017.01 | 0.803464 | 3.443221e-49 | 1.731454e-46 |
| MsG0380015778.01 | MsG0880045111.01 | 0.801900 | 7.238553e-49 | 3.497631e-46 |
| MsG0380015778.01 | MsG0880045362.01 | 0.812673 | 3.766616e-51 | 2.409746e-48 |
| MsG0380015778.01 | MsG0880045613.01 | 0.801027 | 1.092814e-48 | 5.165392e-46 |
| MsG0380015778.01 | MsG0880045736.01 | 0.833981 | 3.902246e-56 | 4.568185e-53 |
| MsG0380015778.01 | MsG0880045937.01 | 0.814613 | 1.409227e-51 | 9.500548e-49 |
| MsG0380015778.01 | MsG0880046620.01 | 0.825501 | 4.528190e-54 | 4.134684e-51 |
| MsG0380015778.01 | MsG0880046995.01 | 0.816952 | 4.241664e-52 | 3.048393e-49 |
| MsG0380015778.01 | MsG0880047045.01 | 0.822883 | 1.865935e-53 | 1.581686e-50 |
| MsG0380015778.01 | MsG0880047052.01 | 0.854453 | 1.218483e-61 | 2.722436e-58 |
| MsG0380015778.01 | MsG0880047763.01 | 0.810886 | 9.221020e-51 | 5.625550e-48 |
| MsG0380015778.01 | MsG0880047764.01 | 0.834094 | 3.655683e-56 | 4.293688e-53 |
| MsG0280006461.01 | MsG0380015778.01 | 0.800406 | 1.462794e-48 | 6.805812e-46 |
| MsG0280006593.01 | MsG0380015778.01 | 0.847632 | 1.022666e-59 | 1.829027e-56 |
| MsG0280006634.01 | MsG0380015778.01 | 0.808505 | 2.997343e-50 | 1.716803e-47 |
| MsG0280006694.01 | MsG0380015778.01 | 0.803641 | 3.163351e-49 | 1.597979e-46 |
| MsG0280006937.01 | MsG0380015778.01 | 0.802502 | 5.442063e-49 | 2.670123e-46 |
| MsG0280007575.01 | MsG0380015778.01 | 0.818097 | 2.341817e-52 | 1.736424e-49 |
| MsG0280007955.01 | MsG0380015778.01 | 0.802461 | 5.547990e-49 | 2.719305e-46 |
| MsG0280008112.01 | MsG0380015778.01 | 0.810473 | 1.132689e-50 | 6.834169e-48 |
| MsG0280009578.01 | MsG0380015778.01 | 0.835068 | 2.081134e-56 | 2.516505e-53 |
| MsG0280010434.01 | MsG0380015778.01 | 0.836292 | 1.019295e-56 | 1.279093e-53 |
| MsG0280010517.01 | MsG0380015778.01 | 0.801170 | 1.021547e-48 | 4.845712e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015778.01.T01 | MTR_3g077300 | 81.069 | 449 | 24 | 3 | 1 | 448 | 1 | 389 | 0.0 | 691 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015778.01.T01 | AT4G34140 | 38.186 | 419 | 127 | 10 | 94 | 448 | 36 | 386 | 1.91e-70 | 228 |
| MsG0380015778.01.T01 | AT4G34140 | 38.038 | 418 | 130 | 10 | 94 | 448 | 36 | 387 | 2.49e-69 | 225 |
| MsG0380015778.01.T01 | AT4G34140 | 37.947 | 419 | 130 | 10 | 94 | 448 | 36 | 388 | 3.00e-69 | 225 |
| MsG0380015778.01.T01 | AT4G34140 | 34.940 | 498 | 160 | 13 | 15 | 448 | 129 | 526 | 1.11e-67 | 225 |
| MsG0380015778.01.T01 | AT4G34140 | 34.870 | 499 | 160 | 13 | 15 | 448 | 129 | 527 | 1.31e-67 | 225 |
| MsG0380015778.01.T01 | AT4G34140 | 37.321 | 418 | 133 | 11 | 94 | 448 | 9 | 360 | 1.98e-65 | 214 |
| MsG0380015778.01.T01 | AT4G34140 | 37.232 | 419 | 133 | 11 | 94 | 448 | 9 | 361 | 2.15e-65 | 214 |
| MsG0380015778.01.T01 | AT4G34140 | 37.859 | 383 | 118 | 8 | 126 | 448 | 25 | 347 | 1.61e-64 | 211 |
| MsG0380015778.01.T01 | AT4G34140 | 35.517 | 290 | 91 | 5 | 15 | 299 | 129 | 327 | 2.65e-41 | 152 |
| MsG0380015778.01.T01 | AT4G34140 | 35.517 | 290 | 91 | 5 | 15 | 299 | 129 | 327 | 3.08e-41 | 154 |
| MsG0380015778.01.T01 | AT4G34140 | 57.265 | 117 | 38 | 3 | 335 | 448 | 420 | 527 | 8.77e-31 | 124 |
Find 114 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCCTTCTAGAAGATTTC+TGG | 0.200653 | 3:-74934482 | None:intergenic |
| TTACTCTTGTATTTGCTTAC+TGG | 0.228432 | 3:+74933644 | MsG0380015778.01.T01:CDS |
| GCCTCTTCTGTAGCTTCTTC+TGG | 0.265752 | 3:-74934427 | None:intergenic |
| CTTATTGATCTATACTTATC+TGG | 0.274374 | 3:+74932636 | MsG0380015778.01.T01:CDS |
| GGTGGCTTTGGTGTTGGTCC+AGG | 0.281454 | 3:+74934352 | MsG0380015778.01.T01:CDS |
| TCCTGTTCCCGCCCTTGTGC+AGG | 0.315698 | 3:+74935366 | MsG0380015778.01.T01:CDS |
| ATGTTTCCAACTGGCTGAAT+AGG | 0.318885 | 3:-74935427 | None:intergenic |
| TTTCAAAATAAAGCTGTATT+GGG | 0.320349 | 3:+74933838 | MsG0380015778.01.T01:CDS |
| AGTGGAAATACCTTCATCTA+TGG | 0.335384 | 3:-74933007 | None:intergenic |
| GTTTCAAAATAAAGCTGTAT+TGG | 0.356716 | 3:+74933837 | MsG0380015778.01.T01:CDS |
| AACATTGGCAGTGCAGGCTT+GGG | 0.359973 | 3:+74935445 | MsG0380015778.01.T01:CDS |
| AGTTACAATTTATAAGCAAT+AGG | 0.365703 | 3:+74933794 | MsG0380015778.01.T01:CDS |
| ACAGGCCCAGCAGATGAAAA+TGG | 0.380870 | 3:+74932865 | MsG0380015778.01.T01:CDS |
| CAGTTGTGGACTTGTGGGAC+TGG | 0.396053 | 3:+74933443 | MsG0380015778.01.T01:CDS |
| GAGGCGTTAAAGATGTCATT+TGG | 0.400128 | 3:+74934445 | MsG0380015778.01.T01:CDS |
| CCCTGCACAAGGGCGGGAAC+AGG | 0.401647 | 3:-74935367 | None:intergenic |
| AAACATTGGCAGTGCAGGCT+TGG | 0.407324 | 3:+74935444 | MsG0380015778.01.T01:CDS |
| CTGCCGATCCAACAAAAGAT+TGG | 0.415464 | 3:+74933993 | MsG0380015778.01.T01:CDS |
| GGCAAGGTTGGTTGGAAGAC+TGG | 0.422436 | 3:+74933507 | MsG0380015778.01.T01:CDS |
| GTTACAATTTATAAGCAATA+GGG | 0.423999 | 3:+74933795 | MsG0380015778.01.T01:CDS |
| GTTTCCAGTTGTGGACTTGT+GGG | 0.427219 | 3:+74933438 | MsG0380015778.01.T01:CDS |
| AGCTTACAGAAATACTGAAA+TGG | 0.427789 | 3:+74932828 | MsG0380015778.01.T01:intron |
| CAGTCCCACAAGTCCACAAC+TGG | 0.428086 | 3:-74933442 | None:intergenic |
| GATCTGGTACGCGTCAAAAC+AGG | 0.428981 | 3:+74933613 | MsG0380015778.01.T01:CDS |
| CCCGCCCTTGTGCAGGGAGA+AGG | 0.431469 | 3:+74935373 | MsG0380015778.01.T01:CDS |
| AGAATCTTGCATGGTGGCTT+TGG | 0.433461 | 3:+74934340 | MsG0380015778.01.T01:CDS |
| AAAAGATAGGGTGGCAAGGT+TGG | 0.437322 | 3:+74933495 | MsG0380015778.01.T01:CDS |
| TGCCGATCCAACAAAAGATT+GGG | 0.443261 | 3:+74933994 | MsG0380015778.01.T01:CDS |
| TACCATTCCGACGGCGGTGG+AGG | 0.443987 | 3:-74932524 | None:intergenic |
| GCTTCTTCTGGACAAGCATC+AGG | 0.444285 | 3:-74934415 | None:intergenic |
| AGTTTCCAGTTGTGGACTTG+TGG | 0.448878 | 3:+74933437 | MsG0380015778.01.T01:CDS |
| GTTGGAAACATTGGCAGTGC+AGG | 0.451094 | 3:+74935439 | MsG0380015778.01.T01:CDS |
| GCTTACAGAAATACTGAAAT+GGG | 0.451792 | 3:+74932829 | MsG0380015778.01.T01:intron |
| TCGAGATGTACTTCGCAGAT+AGG | 0.453801 | 3:-74933592 | None:intergenic |
| TATGCCAGAAATCTTCTAGA+AGG | 0.454930 | 3:+74934478 | MsG0380015778.01.T01:CDS |
| CATTGAATCAAGGAAAGATC+TGG | 0.457483 | 3:+74933408 | MsG0380015778.01.T01:CDS |
| GGACTTGTGGGACTGGGAAA+TGG | 0.461025 | 3:+74933450 | MsG0380015778.01.T01:CDS |
| TAGGGATAGTGTGGCTTACA+TGG | 0.462858 | 3:+74933813 | MsG0380015778.01.T01:CDS |
| GCACTGCCAATGTTTCCAAC+TGG | 0.470042 | 3:-74935436 | None:intergenic |
| TTGCATGGTGGCTTTGGTGT+TGG | 0.471657 | 3:+74934346 | MsG0380015778.01.T01:CDS |
| GTGGCTTTGGTGTTGGTCCA+GGG | 0.472256 | 3:+74934353 | MsG0380015778.01.T01:CDS |
| GATAGGGTGGCAAGGTTGGT+TGG | 0.473323 | 3:+74933499 | MsG0380015778.01.T01:CDS |
| ATCTTCTAGAAGGCATGGGC+TGG | 0.474580 | 3:+74934488 | MsG0380015778.01.T01:CDS |
| TCCACAAGTTGGACTGTTCG+TGG | 0.482684 | 3:-74932498 | None:intergenic |
| GGTCCAGGGCAGAAGAATCT+TGG | 0.483376 | 3:+74934367 | MsG0380015778.01.T01:CDS |
| CAAGTCCTTCTCCCTGCACA+AGG | 0.485026 | 3:-74935378 | None:intergenic |
| CCTTCTCCCTGCACAAGGGC+GGG | 0.486959 | 3:-74935373 | None:intergenic |
| CTTGTGCAGGGAGAAGGACT+TGG | 0.487602 | 3:+74935379 | MsG0380015778.01.T01:CDS |
| ACACCAAGATTCTTCTGCCC+TGG | 0.490581 | 3:-74934370 | None:intergenic |
| CCTGTTCCCGCCCTTGTGCA+GGG | 0.492931 | 3:+74935367 | MsG0380015778.01.T01:CDS |
| TTGGCAGTGCAGGCTTGGGG+TGG | 0.496258 | 3:+74935449 | MsG0380015778.01.T01:CDS |
| CAGTTCAACAAAAGGCTTGG+TGG | 0.498063 | 3:+74935402 | MsG0380015778.01.T01:CDS |
| GGACTTGGCAGTTCAACAAA+AGG | 0.504360 | 3:+74935394 | MsG0380015778.01.T01:CDS |
| AGTTGTGGACTTGTGGGACT+GGG | 0.509025 | 3:+74933444 | MsG0380015778.01.T01:CDS |
| AAGTCAGCTTTCTGTATCCA+AGG | 0.510213 | 3:+74934129 | MsG0380015778.01.T01:CDS |
| ACCCTCCACCGCCGTCGGAA+TGG | 0.516570 | 3:+74932522 | MsG0380015778.01.T01:CDS |
| CTGCGAAGTACATCTCGATC+TGG | 0.518298 | 3:+74933597 | MsG0380015778.01.T01:CDS |
| TTATATCCATCGGTTTCCAC+GGG | 0.522689 | 3:-74932702 | None:intergenic |
| GTTATATCCATCGGTTTCCA+CGG | 0.523283 | 3:-74932703 | None:intergenic |
| AACTTCTCATTAGAAGCTGA+TGG | 0.525343 | 3:+74932723 | MsG0380015778.01.T01:CDS |
| CAGAAATCTTCTAGAAGGCA+TGG | 0.525345 | 3:+74934483 | MsG0380015778.01.T01:CDS |
| TGGCAGTTCAACAAAAGGCT+TGG | 0.525531 | 3:+74935399 | MsG0380015778.01.T01:CDS |
| GGATACCATTCCGACGGCGG+TGG | 0.526658 | 3:-74932527 | None:intergenic |
| GGAATTTCAGTTGAAGTGGA+AGG | 0.529631 | 3:-74934079 | None:intergenic |
| GTGGAACCTATTCAGCCAGT+TGG | 0.535283 | 3:+74935421 | MsG0380015778.01.T01:CDS |
| ATGGGAGGTGACTGGACCAC+AGG | 0.535287 | 3:+74932847 | MsG0380015778.01.T01:CDS |
| TCCTTCTCCCTGCACAAGGG+CGG | 0.537892 | 3:-74935374 | None:intergenic |
| ATGGTCAAGTCATTGAATCA+AGG | 0.539010 | 3:+74933398 | MsG0380015778.01.T01:CDS |
| TAATGAGAAGTTATATCCAT+CGG | 0.540938 | 3:-74932712 | None:intergenic |
| GAAGCCACATATCTCGCACT+TGG | 0.541343 | 3:-74933953 | None:intergenic |
| GATGAAAATCACTTAGCTGA+TGG | 0.548544 | 3:+74932979 | MsG0380015778.01.T01:CDS |
| ATTCAGCCAGTTGGAAACAT+TGG | 0.550272 | 3:+74935430 | MsG0380015778.01.T01:CDS |
| TCTAGAAGGCATGGGCTGGA+AGG | 0.551981 | 3:+74934492 | MsG0380015778.01.T01:CDS |
| ATACTGAAATGGGAGGTGAC+TGG | 0.558400 | 3:+74932839 | MsG0380015778.01.T01:CDS |
| TTTCAACAGAGGAGATAGAT+GGG | 0.558751 | 3:-74933552 | None:intergenic |
| ACCATTCCGACGGCGGTGGA+GGG | 0.559175 | 3:-74932523 | None:intergenic |
| AGATTTCTGGCATAACTACC+TGG | 0.559707 | 3:-74934469 | None:intergenic |
| TTGGATACAGAAAGCTGACT+TGG | 0.564129 | 3:-74934127 | None:intergenic |
| AAACCCAAGTGCGAGATATG+TGG | 0.566437 | 3:+74933949 | MsG0380015778.01.T01:CDS |
| GATGGAAGTTCCATAGATGA+AGG | 0.567701 | 3:+74932997 | MsG0380015778.01.T01:CDS |
| GGTGGAGGGTTTCCACAAGT+TGG | 0.574803 | 3:-74932509 | None:intergenic |
| TCCACGAACAGTCCAACTTG+TGG | 0.576946 | 3:+74932497 | MsG0380015778.01.T01:CDS |
| GTGGGTAAATCTTTCGCTGT+AGG | 0.578293 | 3:-74934100 | None:intergenic |
| TGGAAACCCTCCACCGCCGT+CGG | 0.581504 | 3:+74932517 | MsG0380015778.01.T01:CDS |
| GATGCTTATCAAGTAGAAGA+AGG | 0.583550 | 3:+74932934 | MsG0380015778.01.T01:CDS |
| TCCAGAAGAAGCTACAGAAG+AGG | 0.585922 | 3:+74934426 | MsG0380015778.01.T01:CDS |
| TATAAGCAATAGGGATAGTG+TGG | 0.590942 | 3:+74933804 | MsG0380015778.01.T01:CDS |
| ACATTGGCAGTGCAGGCTTG+GGG | 0.591205 | 3:+74935446 | MsG0380015778.01.T01:CDS |
| TGTAGGAATTTCAGTTGAAG+TGG | 0.593062 | 3:-74934083 | None:intergenic |
| AGAAATCTTCTAGAAGGCAT+GGG | 0.593920 | 3:+74934484 | MsG0380015778.01.T01:CDS |
| AGAAGGCATGGGCTGGAAGG+AGG | 0.595542 | 3:+74934495 | MsG0380015778.01.T01:CDS |
| AAGCCACATATCTCGCACTT+GGG | 0.596356 | 3:-74933952 | None:intergenic |
| ATGGAAAAGATAGGGTGGCA+AGG | 0.600283 | 3:+74933491 | MsG0380015778.01.T01:CDS |
| ACAGACCCCGTGGAAACCGA+TGG | 0.614452 | 3:+74932696 | MsG0380015778.01.T01:CDS |
| TTAAAGATGTCATTTGGACC+AGG | 0.619131 | 3:+74934451 | MsG0380015778.01.T01:CDS |
| GAAATTTACGTATAATAACA+AGG | 0.628527 | 3:-74933753 | None:intergenic |
| GGGCAGAAGAATCTTGGTGT+CGG | 0.634541 | 3:+74934373 | MsG0380015778.01.T01:CDS |
| GAAAGCTGACTTGGCAACGT+GGG | 0.634656 | 3:-74934118 | None:intergenic |
| ATCAAGTAGAAGAAGGTGAG+TGG | 0.644722 | 3:+74932941 | MsG0380015778.01.T01:CDS |
| AAGTCCTTCTCCCTGCACAA+GGG | 0.644870 | 3:-74935377 | None:intergenic |
| AAAAGATGGAAAAGATAGGG+TGG | 0.647950 | 3:+74933486 | MsG0380015778.01.T01:CDS |
| GCTGAAAGAAGAATCTTGCA+TGG | 0.649213 | 3:+74934331 | MsG0380015778.01.T01:CDS |
| TTTATATTAGATGATAACTG+AGG | 0.658562 | 3:-74934022 | None:intergenic |
| TGAGTGGATTCCAGATCCAG+AGG | 0.665421 | 3:+74932957 | MsG0380015778.01.T01:CDS |
| TACAGAAATACTGAAATGGG+AGG | 0.669814 | 3:+74932832 | MsG0380015778.01.T01:CDS |
| GAAGGAGGATACCATTCCGA+CGG | 0.673337 | 3:-74932533 | None:intergenic |
| GGAGGATACCATTCCGACGG+CGG | 0.673907 | 3:-74932530 | None:intergenic |
| AGAAAGCTGACTTGGCAACG+TGG | 0.688129 | 3:-74934119 | None:intergenic |
| ATGTCAATATAGAGATCGCG+CGG | 0.698371 | 3:+74934309 | MsG0380015778.01.T01:CDS |
| GTCAACCTTGTTCATCGACG+AGG | 0.698810 | 3:-74935472 | None:intergenic |
| GAAAGAAGAATCTTGCATGG+TGG | 0.712797 | 3:+74934334 | MsG0380015778.01.T01:CDS |
| TGGTCAAACAATCTGCAAAG+CGG | 0.722667 | 3:+74933527 | MsG0380015778.01.T01:CDS |
| TATATCCATCGGTTTCCACG+GGG | 0.724216 | 3:-74932701 | None:intergenic |
| TGATACAGTGACAGACCCCG+TGG | 0.770896 | 3:+74932686 | MsG0380015778.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTATTTTTTTTTTAA+TGG | + | Chr3:74935328-74935347 | MsG0380015778.01.T01:intron | 0.0% |
| !! | AATTCAAAATTAAAATTCTT+AGG | + | Chr3:74934564-74934583 | MsG0380015778.01.T01:intron | 10.0% |
| !! | ATAAAAAATCAAATTATACA+TGG | - | Chr3:74933719-74933738 | None:intergenic | 10.0% |
| !! | AAATAGAAAATGTAGAAATT+TGG | + | Chr3:74934998-74935017 | MsG0380015778.01.T01:intron | 15.0% |
| !! | ATATAATCATCAATAGAAAA+AGG | - | Chr3:74932568-74932587 | None:intergenic | 15.0% |
| !! | GTATAGTTCATATAAATATA+GGG | - | Chr3:74934745-74934764 | None:intergenic | 15.0% |
| !!! | AAATTTCTACATTTTCTATT+TGG | - | Chr3:74934999-74935018 | None:intergenic | 15.0% |
| !!! | TAAATTTCATTTTAGAATCA+TGG | + | Chr3:74933768-74933787 | MsG0380015778.01.T01:CDS | 15.0% |
| !!! | TTTTTTATAATGACAAACTT+TGG | + | Chr3:74935209-74935228 | MsG0380015778.01.T01:intron | 15.0% |
| !! | AGTTACAATTTATAAGCAAT+AGG | + | Chr3:74933794-74933813 | MsG0380015778.01.T01:CDS | 20.0% |
| !! | ATAAAAGTTTATAAAAGAGG+AGG | - | Chr3:74935068-74935087 | None:intergenic | 20.0% |
| !! | ATCAAACATATGAACAAAAT+AGG | - | Chr3:74933328-74933347 | None:intergenic | 20.0% |
| !! | CATTATTGTATTATTGTACA+TGG | - | Chr3:74934941-74934960 | None:intergenic | 20.0% |
| !! | GAAATTTACGTATAATAACA+AGG | - | Chr3:74933756-74933775 | None:intergenic | 20.0% |
| !! | GGTATAGTTCATATAAATAT+AGG | - | Chr3:74934746-74934765 | None:intergenic | 20.0% |
| !! | GTTACAATTTATAAGCAATA+GGG | + | Chr3:74933795-74933814 | MsG0380015778.01.T01:CDS | 20.0% |
| !! | TCGATAAAAGTTTATAAAAG+AGG | - | Chr3:74935071-74935090 | None:intergenic | 20.0% |
| !! | TCTGTTATATATAAGCTAAT+TGG | - | Chr3:74934642-74934661 | None:intergenic | 20.0% |
| !! | TGTGATAATATTAAAAGATC+TGG | + | Chr3:74934695-74934714 | MsG0380015778.01.T01:intron | 20.0% |
| !! | TTTATATTAGATGATAACTG+AGG | - | Chr3:74934025-74934044 | None:intergenic | 20.0% |
| !! | TTTCAAAATAAAGCTGTATT+GGG | + | Chr3:74933838-74933857 | MsG0380015778.01.T01:CDS | 20.0% |
| !!! | AAATTCACATTGTTTTATGT+TGG | - | Chr3:74935192-74935211 | None:intergenic | 20.0% |
| !!! | CAATGGTATAGTTTTTAAAT+AGG | - | Chr3:74934613-74934632 | None:intergenic | 20.0% |
| !!! | GCAAAATTCACAATTTTTAT+CGG | + | Chr3:74935288-74935307 | MsG0380015778.01.T01:intron | 20.0% |
| !!! | TGCACATCATAATAATTTTT+TGG | - | Chr3:74933129-74933148 | None:intergenic | 20.0% |
| ! | AATTATTATGATGTGCACTA+TGG | + | Chr3:74933132-74933151 | MsG0380015778.01.T01:intron | 25.0% |
| ! | ACAGAAAAGTTACATAAGTT+AGG | - | Chr3:74932755-74932774 | None:intergenic | 25.0% |
| ! | ACTAGATTACTGAATAAACA+AGG | - | Chr3:74933221-74933240 | None:intergenic | 25.0% |
| ! | ATATATAACAGAATTGCATC+AGG | + | Chr3:74934650-74934669 | MsG0380015778.01.T01:intron | 25.0% |
| ! | ATTATTATGATGTGCACTAT+GGG | + | Chr3:74933133-74933152 | MsG0380015778.01.T01:intron | 25.0% |
| ! | CAAAAAAGATGGAAAAGATA+GGG | + | Chr3:74933483-74933502 | MsG0380015778.01.T01:CDS | 25.0% |
| ! | CTTATTGATCTATACTTATC+TGG | + | Chr3:74932636-74932655 | MsG0380015778.01.T01:CDS | 25.0% |
| ! | GGTATACTGCAAAAATAAAT+GGG | + | Chr3:74933154-74933173 | MsG0380015778.01.T01:intron | 25.0% |
| ! | GTTTCAAAATAAAGCTGTAT+TGG | + | Chr3:74933837-74933856 | MsG0380015778.01.T01:CDS | 25.0% |
| ! | TAATGAGAAGTTATATCCAT+CGG | - | Chr3:74932715-74932734 | None:intergenic | 25.0% |
| ! | TAGAAAATGTAGAAATTTGG+AGG | + | Chr3:74935001-74935020 | MsG0380015778.01.T01:intron | 25.0% |
| ! | TTAAAATTAAGCTAACCAAC+AGG | + | Chr3:74932601-74932620 | MsG0380015778.01.T01:intron | 25.0% |
| !! | TATATTGACATTTTATCTGC+TGG | - | Chr3:74934300-74934319 | None:intergenic | 25.0% |
| !! | TATGTGTTATCTGAAATTTG+AGG | - | Chr3:74934722-74934741 | None:intergenic | 25.0% |
| !! | TCTAAATTTCTTTTCAACAG+AGG | - | Chr3:74933566-74933585 | None:intergenic | 25.0% |
| !! | TGTACATGGTTTTTCTTTTT+TGG | - | Chr3:74934927-74934946 | None:intergenic | 25.0% |
| !! | TGTTTGATTTATACCATTAC+AGG | + | Chr3:74933340-74933359 | MsG0380015778.01.T01:intron | 25.0% |
| AAGGTTCAAGTAACTAAGAA+GGG | + | Chr3:74933188-74933207 | MsG0380015778.01.T01:intron | 30.0% | |
| AAGTGTTAATGCGTATACAT+TGG | - | Chr3:74934767-74934786 | None:intergenic | 30.0% | |
| AGCTTACAGAAATACTGAAA+TGG | + | Chr3:74932828-74932847 | MsG0380015778.01.T01:intron | 30.0% | |
| CCAAAAAAGATGGAAAAGAT+AGG | + | Chr3:74933482-74933501 | MsG0380015778.01.T01:CDS | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | Chr3:74934876-74934895 | MsG0380015778.01.T01:intron | 30.0% | |
| GATGTACTGAATTACATGAA+GGG | - | Chr3:74934224-74934243 | None:intergenic | 30.0% | |
| GCTTACAGAAATACTGAAAT+GGG | + | Chr3:74932829-74932848 | MsG0380015778.01.T01:intron | 30.0% | |
| GGGTATACTGCAAAAATAAA+TGG | + | Chr3:74933153-74933172 | MsG0380015778.01.T01:intron | 30.0% | |
| TCATCAATAGAAAAAGGATG+TGG | - | Chr3:74932562-74932581 | None:intergenic | 30.0% | |
| TCATTCTATCTCTATGTACT+TGG | + | Chr3:74933093-74933112 | MsG0380015778.01.T01:intron | 30.0% | |
| TCTTGTTCGAAGAAGAAAAA+TGG | + | Chr3:74933365-74933384 | MsG0380015778.01.T01:CDS | 30.0% | |
| TGATGTACTGAATTACATGA+AGG | - | Chr3:74934225-74934244 | None:intergenic | 30.0% | |
| TTACTCTTGTATTTGCTTAC+TGG | + | Chr3:74933644-74933663 | MsG0380015778.01.T01:CDS | 30.0% | |
| ! | CCTATCTTTTCCATCTTTTT+TGG | - | Chr3:74933485-74933504 | None:intergenic | 30.0% |
| ! | TATTGTCATGCTCTTTTATC+AGG | + | Chr3:74933908-74933927 | MsG0380015778.01.T01:intron | 30.0% |
| !!! | GGTTTTTCTTTTTTGGTAGT+GGG | - | Chr3:74934920-74934939 | None:intergenic | 30.0% |
| !!! | TGGTTTTTCTTTTTTGGTAG+TGG | - | Chr3:74934921-74934940 | None:intergenic | 30.0% |
| AAAAGATGGAAAAGATAGGG+TGG | + | Chr3:74933486-74933505 | MsG0380015778.01.T01:CDS | 35.0% | |
| AACTTCTCATTAGAAGCTGA+TGG | + | Chr3:74932723-74932742 | MsG0380015778.01.T01:CDS | 35.0% | |
| AAGCTAATTGGCAATGTCAA+TGG | - | Chr3:74934630-74934649 | None:intergenic | 35.0% | |
| AATTACATGAAGGGTGATCA+TGG | - | Chr3:74934215-74934234 | None:intergenic | 35.0% | |
| AGTACTTCTTGGAATGAACA+CGG | + | Chr3:74933883-74933902 | MsG0380015778.01.T01:intron | 35.0% | |
| AGTGGAAATACCTTCATCTA+TGG | - | Chr3:74933010-74933029 | None:intergenic | 35.0% | |
| ATGGTCAAGTCATTGAATCA+AGG | + | Chr3:74933398-74933417 | MsG0380015778.01.T01:CDS | 35.0% | |
| ATTACATGAAGGGTGATCAT+GGG | - | Chr3:74934214-74934233 | None:intergenic | 35.0% | |
| CAATAGAAAAAGGATGTGGA+AGG | - | Chr3:74932558-74932577 | None:intergenic | 35.0% | |
| CAATTTCCAAGTACAAACCT+TGG | - | Chr3:74934149-74934168 | None:intergenic | 35.0% | |
| CATTGAATCAAGGAAAGATC+TGG | + | Chr3:74933408-74933427 | MsG0380015778.01.T01:CDS | 35.0% | |
| CTAACTCATCCTTACAAAAC+TGG | + | Chr3:74935024-74935043 | MsG0380015778.01.T01:intron | 35.0% | |
| CTATTATGAAGTCACATGAG+AGG | + | Chr3:74933690-74933709 | MsG0380015778.01.T01:intron | 35.0% | |
| CTTAGTTACTTGAACCTTCA+AGG | - | Chr3:74933186-74933205 | None:intergenic | 35.0% | |
| GAAGGTTCAAGTAACTAAGA+AGG | + | Chr3:74933187-74933206 | MsG0380015778.01.T01:intron | 35.0% | |
| GATGAAAATCACTTAGCTGA+TGG | + | Chr3:74932979-74932998 | MsG0380015778.01.T01:CDS | 35.0% | |
| GATGCTTATCAAGTAGAAGA+AGG | + | Chr3:74932934-74932953 | MsG0380015778.01.T01:CDS | 35.0% | |
| TACAGAAATACTGAAATGGG+AGG | + | Chr3:74932832-74932851 | MsG0380015778.01.T01:CDS | 35.0% | |
| TATAAGCAATAGGGATAGTG+TGG | + | Chr3:74933804-74933823 | MsG0380015778.01.T01:CDS | 35.0% | |
| TATGCCAGAAATCTTCTAGA+AGG | + | Chr3:74934478-74934497 | MsG0380015778.01.T01:CDS | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | + | Chr3:74934881-74934900 | MsG0380015778.01.T01:intron | 35.0% | |
| TGTAGGAATTTCAGTTGAAG+TGG | - | Chr3:74934086-74934105 | None:intergenic | 35.0% | |
| TTTCAACAGAGGAGATAGAT+GGG | - | Chr3:74933555-74933574 | None:intergenic | 35.0% | |
| ! | AGAAATCTTCTAGAAGGCAT+GGG | + | Chr3:74934484-74934503 | MsG0380015778.01.T01:CDS | 35.0% |
| ! | ATCCCAATCTTTTGTTGGAT+CGG | - | Chr3:74933999-74934018 | None:intergenic | 35.0% |
| ! | GGAAAATCCCAATCTTTTGT+TGG | - | Chr3:74934004-74934023 | None:intergenic | 35.0% |
| ! | TTAAAGATGTCATTTGGACC+AGG | + | Chr3:74934451-74934470 | MsG0380015778.01.T01:CDS | 35.0% |
| ! | TTTTCAACAGAGGAGATAGA+TGG | - | Chr3:74933556-74933575 | None:intergenic | 35.0% |
| !! | ACAAAACTGGCTTGTAAAGT+GGG | + | Chr3:74935037-74935056 | MsG0380015778.01.T01:intron | 35.0% |
| !! | AGACACAAAAGCATTTAGCA+GGG | - | Chr3:74933256-74933275 | None:intergenic | 35.0% |
| !! | CTTTACAAGCCAGTTTTGTA+AGG | - | Chr3:74935036-74935055 | None:intergenic | 35.0% |
| !! | TAAATGGGTTGTTTCCTTGA+AGG | + | Chr3:74933169-74933188 | MsG0380015778.01.T01:intron | 35.0% |
| !! | TACAAAACTGGCTTGTAAAG+TGG | + | Chr3:74935036-74935055 | MsG0380015778.01.T01:intron | 35.0% |
| !! | TTAGTGCTAGAAGTACTTCT+TGG | + | Chr3:74933872-74933891 | MsG0380015778.01.T01:intron | 35.0% |
| AAGTCAGCTTTCTGTATCCA+AGG | + | Chr3:74934129-74934148 | MsG0380015778.01.T01:CDS | 40.0% | |
| AAGTGTGTCTTCTAACCTGT+TGG | - | Chr3:74932619-74932638 | None:intergenic | 40.0% | |
| AGAAAAAGGATGTGGAAGGA+AGG | - | Chr3:74932554-74932573 | None:intergenic | 40.0% | |
| AGAGTCCTATCTAACTGATG+TGG | + | Chr3:74935090-74935109 | MsG0380015778.01.T01:intron | 40.0% | |
| AGCTTGTGTCTACTACTAAC+TGG | + | Chr3:74933059-74933078 | MsG0380015778.01.T01:intron | 40.0% | |
| ATCAAGTAGAAGAAGGTGAG+TGG | + | Chr3:74932941-74932960 | MsG0380015778.01.T01:CDS | 40.0% | |
| ATGTCAATATAGAGATCGCG+CGG | + | Chr3:74934309-74934328 | MsG0380015778.01.T01:CDS | 40.0% | |
| ATGTTTCCAACTGGCTGAAT+AGG | - | Chr3:74935430-74935449 | None:intergenic | 40.0% | |
| ATTCAGCCAGTTGGAAACAT+TGG | + | Chr3:74935430-74935449 | MsG0380015778.01.T01:CDS | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | + | Chr3:74934883-74934902 | MsG0380015778.01.T01:intron | 40.0% | |
| CTGTATCCAAGGTTTGTACT+TGG | + | Chr3:74934140-74934159 | MsG0380015778.01.T01:intron | 40.0% | |
| GAAAGAAGAATCTTGCATGG+TGG | + | Chr3:74934334-74934353 | MsG0380015778.01.T01:CDS | 40.0% | |
| GAGTCCTATCTAACTGATGT+GGG | + | Chr3:74935091-74935110 | MsG0380015778.01.T01:intron | 40.0% | |
| GATGGAAGTTCCATAGATGA+AGG | + | Chr3:74932997-74933016 | MsG0380015778.01.T01:CDS | 40.0% | |
| GCAACTCAAATGTCGCAATT+AGG | + | Chr3:74935132-74935151 | MsG0380015778.01.T01:intron | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | + | Chr3:74934882-74934901 | MsG0380015778.01.T01:intron | 40.0% | |
| GCTGAAAGAAGAATCTTGCA+TGG | + | Chr3:74934331-74934350 | MsG0380015778.01.T01:CDS | 40.0% | |
| GGAATTTCAGTTGAAGTGGA+AGG | - | Chr3:74934082-74934101 | None:intergenic | 40.0% | |
| TAGTCCCACATCAGTTAGAT+AGG | - | Chr3:74935098-74935117 | None:intergenic | 40.0% | |
| TGCCGATCCAACAAAAGATT+GGG | + | Chr3:74933994-74934013 | MsG0380015778.01.T01:CDS | 40.0% | |
| TGGTCAAACAATCTGCAAAG+CGG | + | Chr3:74933527-74933546 | MsG0380015778.01.T01:CDS | 40.0% | |
| TTCGAACAAGATGCCTGTAA+TGG | - | Chr3:74933356-74933375 | None:intergenic | 40.0% | |
| TTGGATACAGAAAGCTGACT+TGG | - | Chr3:74934130-74934149 | None:intergenic | 40.0% | |
| ! | AATGCTTTTGTGTCTCTGCA+TGG | + | Chr3:74933261-74933280 | MsG0380015778.01.T01:intron | 40.0% |
| ! | CAGAAATCTTCTAGAAGGCA+TGG | + | Chr3:74934483-74934502 | MsG0380015778.01.T01:CDS | 40.0% |
| ! | CATGCCTTCTAGAAGATTTC+TGG | - | Chr3:74934485-74934504 | None:intergenic | 40.0% |
| ! | GAGGCGTTAAAGATGTCATT+TGG | + | Chr3:74934445-74934464 | MsG0380015778.01.T01:CDS | 40.0% |
| ! | GCTAAGTGATTTTCATCCTC+TGG | - | Chr3:74932976-74932995 | None:intergenic | 40.0% |
| ! | GTCAGAGCATCCAAAAAAGA+TGG | + | Chr3:74933472-74933491 | MsG0380015778.01.T01:CDS | 40.0% |
| ! | TGATTTTCATCCTCTGGATC+TGG | - | Chr3:74932970-74932989 | None:intergenic | 40.0% |
| !! | AGATTTCTGGCATAACTACC+TGG | - | Chr3:74934472-74934491 | None:intergenic | 40.0% |
| !! | CAAAACTGGCTTGTAAAGTG+GGG | + | Chr3:74935038-74935057 | MsG0380015778.01.T01:intron | 40.0% |
| !! | GACACAAAAGCATTTAGCAG+GGG | - | Chr3:74933255-74933274 | None:intergenic | 40.0% |
| !! | GAGACACAAAAGCATTTAGC+AGG | - | Chr3:74933257-74933276 | None:intergenic | 40.0% |
| !! | GTTATATCCATCGGTTTCCA+CGG | - | Chr3:74932706-74932725 | None:intergenic | 40.0% |
| !! | TTATATCCATCGGTTTCCAC+GGG | - | Chr3:74932705-74932724 | None:intergenic | 40.0% |
| !!! | GGTTTTAGAGTTTCCAGTTG+TGG | + | Chr3:74933429-74933448 | MsG0380015778.01.T01:CDS | 40.0% |
| !!! | TCATGCCATTTTCATCTGCT+GGG | - | Chr3:74932873-74932892 | None:intergenic | 40.0% |
| AAAAGATAGGGTGGCAAGGT+TGG | + | Chr3:74933495-74933514 | MsG0380015778.01.T01:CDS | 45.0% | |
| AAAAGGATGTGGAAGGAAGG+AGG | - | Chr3:74932551-74932570 | None:intergenic | 45.0% | |
| AAACCCAAGTGCGAGATATG+TGG | + | Chr3:74933949-74933968 | MsG0380015778.01.T01:CDS | 45.0% | |
| AAGCCACATATCTCGCACTT+GGG | - | Chr3:74933955-74933974 | None:intergenic | 45.0% | |
| AATGTCGCAATTAGGCGACT+AGG | + | Chr3:74935140-74935159 | MsG0380015778.01.T01:intron | 45.0% | |
| AGAATCTTGCATGGTGGCTT+TGG | + | Chr3:74934340-74934359 | MsG0380015778.01.T01:CDS | 45.0% | |
| AGTTTCCAGTTGTGGACTTG+TGG | + | Chr3:74933437-74933456 | MsG0380015778.01.T01:CDS | 45.0% | |
| ATACTGAAATGGGAGGTGAC+TGG | + | Chr3:74932839-74932858 | MsG0380015778.01.T01:CDS | 45.0% | |
| ATGCAATCTCACTCATGGTG+TGG | - | Chr3:74933304-74933323 | None:intergenic | 45.0% | |
| ATGGAAAAGATAGGGTGGCA+AGG | + | Chr3:74933491-74933510 | MsG0380015778.01.T01:CDS | 45.0% | |
| ATGTCGCAATTAGGCGACTA+GGG | + | Chr3:74935141-74935160 | MsG0380015778.01.T01:intron | 45.0% | |
| CAGTTCAACAAAAGGCTTGG+TGG | + | Chr3:74935402-74935421 | MsG0380015778.01.T01:CDS | 45.0% | |
| CTGCCGATCCAACAAAAGAT+TGG | + | Chr3:74933993-74934012 | MsG0380015778.01.T01:CDS | 45.0% | |
| GAAAAATGGCGAGCTCAGTA+TGG | + | Chr3:74933379-74933398 | MsG0380015778.01.T01:CDS | 45.0% | |
| GGACTTGGCAGTTCAACAAA+AGG | + | Chr3:74935394-74935413 | MsG0380015778.01.T01:CDS | 45.0% | |
| GTGGGTAAATCTTTCGCTGT+AGG | - | Chr3:74934103-74934122 | None:intergenic | 45.0% | |
| GTTTCCAGTTGTGGACTTGT+GGG | + | Chr3:74933438-74933457 | MsG0380015778.01.T01:CDS | 45.0% | |
| TAGGCATGCAATCTCACTCA+TGG | - | Chr3:74933309-74933328 | None:intergenic | 45.0% | |
| TAGGGATAGTGTGGCTTACA+TGG | + | Chr3:74933813-74933832 | MsG0380015778.01.T01:CDS | 45.0% | |
| TCCAGAAGAAGCTACAGAAG+AGG | + | Chr3:74934426-74934445 | MsG0380015778.01.T01:CDS | 45.0% | |
| TCGAGATGTACTTCGCAGAT+AGG | - | Chr3:74933595-74933614 | None:intergenic | 45.0% | |
| TGAGCTTAGCTCAGTTGGTT+GGG | + | Chr3:74934854-74934873 | MsG0380015778.01.T01:intron | 45.0% | |
| TGGCAGTTCAACAAAAGGCT+TGG | + | Chr3:74935399-74935418 | MsG0380015778.01.T01:CDS | 45.0% | |
| ! | TACTGGTACGCGTCTAAAAC+AGG | + | Chr3:74933661-74933680 | MsG0380015778.01.T01:intron | 45.0% |
| !! | ACATTTGAGTTGCCTCGTGT+TGG | - | Chr3:74935125-74935144 | None:intergenic | 45.0% |
| !! | TATATCCATCGGTTTCCACG+GGG | - | Chr3:74932704-74932723 | None:intergenic | 45.0% |
| !!! | GTCATGCCATTTTCATCTGC+TGG | - | Chr3:74932874-74932893 | None:intergenic | 45.0% |
| !! | AAAATAATTAAATTATAGAA+TGG | - | Chr3:74935320-74935339 | None:intergenic | 5.0% |
| AAACATTGGCAGTGCAGGCT+TGG | + | Chr3:74935444-74935463 | MsG0380015778.01.T01:CDS | 50.0% | |
| AACATTGGCAGTGCAGGCTT+GGG | + | Chr3:74935445-74935464 | MsG0380015778.01.T01:CDS | 50.0% | |
| AAGCTCACGAGGACTGTACA+TGG | - | Chr3:74934841-74934860 | None:intergenic | 50.0% | |
| AAGGGTGATCATGGGAGAAG+GGG | - | Chr3:74934206-74934225 | None:intergenic | 50.0% | |
| AAGTCCTTCTCCCTGCACAA+GGG | - | Chr3:74935380-74935399 | None:intergenic | 50.0% | |
| ACACCAAGATTCTTCTGCCC+TGG | - | Chr3:74934373-74934392 | None:intergenic | 50.0% | |
| ACAGGCCCAGCAGATGAAAA+TGG | + | Chr3:74932865-74932884 | MsG0380015778.01.T01:CDS | 50.0% | |
| AGTGGGCAGAATTTGAACCC+CGG | - | Chr3:74934903-74934922 | None:intergenic | 50.0% | |
| AGTTGTGGACTTGTGGGACT+GGG | + | Chr3:74933444-74933463 | MsG0380015778.01.T01:CDS | 50.0% | |
| CCACTTTGCTCGCAAGTCTA+AGG | + | Chr3:74933025-74933044 | MsG0380015778.01.T01:intron | 50.0% | |
| CCTTAGACTTGCGAGCAAAG+TGG | - | Chr3:74933028-74933047 | None:intergenic | 50.0% | |
| CTAGGGGCAGATCGCAATAA+AGG | + | Chr3:74935158-74935177 | MsG0380015778.01.T01:intron | 50.0% | |
| CTGCGAAGTACATCTCGATC+TGG | + | Chr3:74933597-74933616 | MsG0380015778.01.T01:CDS | 50.0% | |
| GAAGCCACATATCTCGCACT+TGG | - | Chr3:74933956-74933975 | None:intergenic | 50.0% | |
| GAAGGAGGATACCATTCCGA+CGG | - | Chr3:74932536-74932555 | None:intergenic | 50.0% | |
| GAAGGGTGATCATGGGAGAA+GGG | - | Chr3:74934207-74934226 | None:intergenic | 50.0% | |
| GATCTGGTACGCGTCAAAAC+AGG | + | Chr3:74933613-74933632 | MsG0380015778.01.T01:CDS | 50.0% | |
| GCACTGCCAATGTTTCCAAC+TGG | - | Chr3:74935439-74935458 | None:intergenic | 50.0% | |
| GCATCAGGTCATCATCACCA+GGG | + | Chr3:74934665-74934684 | MsG0380015778.01.T01:intron | 50.0% | |
| GCCTCTTCTGTAGCTTCTTC+TGG | - | Chr3:74934430-74934449 | None:intergenic | 50.0% | |
| GCTTCTTCTGGACAAGCATC+AGG | - | Chr3:74934418-74934437 | None:intergenic | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+TGG | + | Chr3:74934853-74934872 | MsG0380015778.01.T01:intron | 50.0% | |
| GTGGAACCTATTCAGCCAGT+TGG | + | Chr3:74935421-74935440 | MsG0380015778.01.T01:CDS | 50.0% | |
| GTTGGAAACATTGGCAGTGC+AGG | + | Chr3:74935439-74935458 | MsG0380015778.01.T01:CDS | 50.0% | |
| TCCACGAACAGTCCAACTTG+TGG | + | Chr3:74932497-74932516 | MsG0380015778.01.T01:CDS | 50.0% | |
| TGAAGGGTGATCATGGGAGA+AGG | - | Chr3:74934208-74934227 | None:intergenic | 50.0% | |
| TGCATCAGGTCATCATCACC+AGG | + | Chr3:74934664-74934683 | MsG0380015778.01.T01:intron | 50.0% | |
| TGGGACTAAAAGCCAACACG+AGG | + | Chr3:74935110-74935129 | MsG0380015778.01.T01:intron | 50.0% | |
| TGTCGCAATTAGGCGACTAG+GGG | + | Chr3:74935142-74935161 | MsG0380015778.01.T01:intron | 50.0% | |
| ! | ATCTTCTAGAAGGCATGGGC+TGG | + | Chr3:74934488-74934507 | MsG0380015778.01.T01:CDS | 50.0% |
| ! | ATTTTCATCTGCTGGGCCTG+TGG | - | Chr3:74932866-74932885 | None:intergenic | 50.0% |
| ! | GAGGTATGGACTGAGTTCTC+TGG | + | Chr3:74934514-74934533 | MsG0380015778.01.T01:intron | 50.0% |
| ! | GGGCAGAAGAATCTTGGTGT+CGG | + | Chr3:74934373-74934392 | MsG0380015778.01.T01:CDS | 50.0% |
| ! | TCCACAAGTTGGACTGTTCG+TGG | - | Chr3:74932501-74932520 | None:intergenic | 50.0% |
| ! | TGAGTGGATTCCAGATCCAG+AGG | + | Chr3:74932957-74932976 | MsG0380015778.01.T01:CDS | 50.0% |
| !! | AGAAAGCTGACTTGGCAACG+TGG | - | Chr3:74934122-74934141 | None:intergenic | 50.0% |
| !! | GAAAGCTGACTTGGCAACGT+GGG | - | Chr3:74934121-74934140 | None:intergenic | 50.0% |
| !! | TTGCATGGTGGCTTTGGTGT+TGG | + | Chr3:74934346-74934365 | MsG0380015778.01.T01:CDS | 50.0% |
| ACATTGGCAGTGCAGGCTTG+GGG | + | Chr3:74935446-74935465 | MsG0380015778.01.T01:CDS | 55.0% | |
| AGCATTTAGCAGGGGACTCG+AGG | - | Chr3:74933247-74933266 | None:intergenic | 55.0% | |
| CAAGTCCTTCTCCCTGCACA+AGG | - | Chr3:74935381-74935400 | None:intergenic | 55.0% | |
| CAGTCCCACAAGTCCACAAC+TGG | - | Chr3:74933445-74933464 | None:intergenic | 55.0% | |
| CAGTTGTGGACTTGTGGGAC+TGG | + | Chr3:74933443-74933462 | MsG0380015778.01.T01:CDS | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | Chr3:74934852-74934871 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | Chr3:74934849-74934868 | MsG0380015778.01.T01:intron | 55.0% | |
| CTTGTGCAGGGAGAAGGACT+TGG | + | Chr3:74935379-74935398 | MsG0380015778.01.T01:CDS | 55.0% | |
| GGACTTGTGGGACTGGGAAA+TGG | + | Chr3:74933450-74933469 | MsG0380015778.01.T01:CDS | 55.0% | |
| GGGGCAGATCGCAATAAAGG+CGG | + | Chr3:74935161-74935180 | MsG0380015778.01.T01:intron | 55.0% | |
| GGTCCAGGGCAGAAGAATCT+TGG | + | Chr3:74934367-74934386 | MsG0380015778.01.T01:CDS | 55.0% | |
| GGTGGAGGGTTTCCACAAGT+TGG | - | Chr3:74932512-74932531 | None:intergenic | 55.0% | |
| TATTATCACACACCCCGCCC+TGG | - | Chr3:74934685-74934704 | None:intergenic | 55.0% | |
| TCAGGTCATCATCACCAGGG+CGG | + | Chr3:74934668-74934687 | MsG0380015778.01.T01:intron | 55.0% | |
| TGATACAGTGACAGACCCCG+TGG | + | Chr3:74932686-74932705 | MsG0380015778.01.T01:CDS | 55.0% | |
| ! | GATAGGGTGGCAAGGTTGGT+TGG | + | Chr3:74933499-74933518 | MsG0380015778.01.T01:CDS | 55.0% |
| ! | GGCAAGGTTGGTTGGAAGAC+TGG | + | Chr3:74933507-74933526 | MsG0380015778.01.T01:CDS | 55.0% |
| !! | GTGGCTTTGGTGTTGGTCCA+GGG | + | Chr3:74934353-74934372 | MsG0380015778.01.T01:CDS | 55.0% |
| !! | TCTAGAAGGCATGGGCTGGA+AGG | + | Chr3:74934492-74934511 | MsG0380015778.01.T01:CDS | 55.0% |
| ACAGACCCCGTGGAAACCGA+TGG | + | Chr3:74932696-74932715 | MsG0380015778.01.T01:CDS | 60.0% | |
| AGGTCATCATCACCAGGGCG+GGG | + | Chr3:74934670-74934689 | MsG0380015778.01.T01:intron | 60.0% | |
| ATGGGAGGTGACTGGACCAC+AGG | + | Chr3:74932847-74932866 | MsG0380015778.01.T01:CDS | 60.0% | |
| CAGGTCATCATCACCAGGGC+GGG | + | Chr3:74934669-74934688 | MsG0380015778.01.T01:intron | 60.0% | |
| GGAGGATACCATTCCGACGG+CGG | - | Chr3:74932533-74932552 | None:intergenic | 60.0% | |
| TCCTTCTCCCTGCACAAGGG+CGG | - | Chr3:74935377-74935396 | None:intergenic | 60.0% | |
| !! | AGAAGGCATGGGCTGGAAGG+AGG | + | Chr3:74934495-74934514 | MsG0380015778.01.T01:CDS | 60.0% |
| !! | GCATGGGCTGGAAGGAGGTA+TGG | + | Chr3:74934500-74934519 | MsG0380015778.01.T01:intron | 60.0% |
| !! | GGTGGCTTTGGTGTTGGTCC+AGG | + | Chr3:74934352-74934371 | MsG0380015778.01.T01:CDS | 60.0% |
| ACCATTCCGACGGCGGTGGA+GGG | - | Chr3:74932526-74932545 | None:intergenic | 65.0% | |
| CCTGTTCCCGCCCTTGTGCA+GGG | + | Chr3:74935367-74935386 | MsG0380015778.01.T01:CDS | 65.0% | |
| CCTTCTCCCTGCACAAGGGC+GGG | - | Chr3:74935376-74935395 | None:intergenic | 65.0% | |
| GGATACCATTCCGACGGCGG+TGG | - | Chr3:74932530-74932549 | None:intergenic | 65.0% | |
| TACCATTCCGACGGCGGTGG+AGG | - | Chr3:74932527-74932546 | None:intergenic | 65.0% | |
| TCCTGTTCCCGCCCTTGTGC+AGG | + | Chr3:74935366-74935385 | MsG0380015778.01.T01:CDS | 65.0% | |
| TGGAAACCCTCCACCGCCGT+CGG | + | Chr3:74932517-74932536 | MsG0380015778.01.T01:CDS | 65.0% | |
| TTGGCAGTGCAGGCTTGGGG+TGG | + | Chr3:74935449-74935468 | MsG0380015778.01.T01:CDS | 65.0% | |
| ACCCTCCACCGCCGTCGGAA+TGG | + | Chr3:74932522-74932541 | MsG0380015778.01.T01:CDS | 70.0% | |
| CCCGCCCTTGTGCAGGGAGA+AGG | + | Chr3:74935373-74935392 | MsG0380015778.01.T01:CDS | 70.0% | |
| CCCTGCACAAGGGCGGGAAC+AGG | - | Chr3:74935370-74935389 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 74932491 | 74935483 | 74932491 | ID=MsG0380015778.01;Name=MsG0380015778.01 |
| Chr3 | mRNA | 74932491 | 74935483 | 74932491 | ID=MsG0380015778.01.T01;Parent=MsG0380015778.01;Name=MsG0380015778.01.T01;_AED=0.34;_eAED=0.42;_QI=0|0|0|1|1|1|8|0|448 |
| Chr3 | exon | 74932491 | 74932543 | 74932491 | ID=MsG0380015778.01.T01:exon:944;Parent=MsG0380015778.01.T01 |
| Chr3 | exon | 74932623 | 74932744 | 74932623 | ID=MsG0380015778.01.T01:exon:945;Parent=MsG0380015778.01.T01 |
| Chr3 | exon | 74932830 | 74933018 | 74932830 | ID=MsG0380015778.01.T01:exon:946;Parent=MsG0380015778.01.T01 |
| Chr3 | exon | 74933362 | 74933665 | 74933362 | ID=MsG0380015778.01.T01:exon:947;Parent=MsG0380015778.01.T01 |
| Chr3 | exon | 74933753 | 74933874 | 74933753 | ID=MsG0380015778.01.T01:exon:948;Parent=MsG0380015778.01.T01 |
| Chr3 | exon | 74933930 | 74934150 | 74933930 | ID=MsG0380015778.01.T01:exon:949;Parent=MsG0380015778.01.T01 |
| Chr3 | exon | 74934304 | 74934516 | 74934304 | ID=MsG0380015778.01.T01:exon:950;Parent=MsG0380015778.01.T01 |
| Chr3 | exon | 74935361 | 74935483 | 74935361 | ID=MsG0380015778.01.T01:exon:951;Parent=MsG0380015778.01.T01 |
| Chr3 | CDS | 74932491 | 74932543 | 74932491 | ID=MsG0380015778.01.T01:cds;Parent=MsG0380015778.01.T01 |
| Chr3 | CDS | 74932623 | 74932744 | 74932623 | ID=MsG0380015778.01.T01:cds;Parent=MsG0380015778.01.T01 |
| Chr3 | CDS | 74932830 | 74933018 | 74932830 | ID=MsG0380015778.01.T01:cds;Parent=MsG0380015778.01.T01 |
| Chr3 | CDS | 74933362 | 74933665 | 74933362 | ID=MsG0380015778.01.T01:cds;Parent=MsG0380015778.01.T01 |
| Chr3 | CDS | 74933753 | 74933874 | 74933753 | ID=MsG0380015778.01.T01:cds;Parent=MsG0380015778.01.T01 |
| Chr3 | CDS | 74933930 | 74934150 | 74933930 | ID=MsG0380015778.01.T01:cds;Parent=MsG0380015778.01.T01 |
| Chr3 | CDS | 74934304 | 74934516 | 74934304 | ID=MsG0380015778.01.T01:cds;Parent=MsG0380015778.01.T01 |
| Chr3 | CDS | 74935361 | 74935483 | 74935361 | ID=MsG0380015778.01.T01:cds;Parent=MsG0380015778.01.T01 |
| Gene Sequence |
| Protein sequence |
