AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028601.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028601.01.T01 MTR_5g075390 98.023 354 4 2 1 354 1 351 0.0 706
MsG0580028601.01.T01 MTR_3g467120 70.326 337 64 6 52 354 36 370 1.01e-160 461
MsG0580028601.01.T01 MTR_5g075380 90.683 161 15 0 354 514 2 162 8.03e-106 313
MsG0580028601.01.T01 MTR_3g094020 53.376 311 126 8 54 356 7 306 3.54e-91 281
MsG0580028601.01.T01 MTR_2g099050 52.549 255 68 9 54 261 72 320 6.92e-62 209
MsG0580028601.01.T01 MTR_6g034945 54.425 226 74 7 52 255 26 244 3.79e-59 198
MsG0580028601.01.T01 MTR_4g072090 73.684 114 30 0 147 260 345 458 4.35e-46 168
MsG0580028601.01.T01 MTR_3g466980 41.509 159 93 0 354 512 2 160 4.37e-41 147
MsG0580028601.01.T01 MTR_4g072090 76.042 96 23 0 147 242 345 440 3.35e-38 145
MsG0580028601.01.T01 MTR_4g032620 42.484 153 87 1 354 505 2 154 2.58e-37 137
MsG0580028601.01.T01 MTR_3g467080 43.137 153 86 1 354 505 2 154 1.36e-36 133
MsG0580028601.01.T01 MTR_4g031910 47.297 148 77 1 355 501 3 150 1.21e-35 133
MsG0580028601.01.T01 MTR_3g065100 42.675 157 90 0 355 511 3 159 3.70e-35 132
MsG0580028601.01.T01 MTR_3g466890 43.038 158 90 0 355 512 2 159 4.09e-33 124
MsG0580028601.01.T01 MTR_3g466830 43.226 155 88 0 355 509 2 156 4.62e-33 124
MsG0580028601.01.T01 MTR_8g036130 41.060 151 84 3 355 501 3 152 3.83e-31 121
MsG0580028601.01.T01 MTR_3g031100 35.948 153 97 1 354 505 2 154 4.80e-31 120
MsG0580028601.01.T01 MTR_4g063790 38.608 158 90 2 355 508 3 157 4.80e-30 115
MsG0580028601.01.T01 MTR_1g077320 40.909 154 90 1 355 508 3 155 7.73e-30 115
MsG0580028601.01.T01 MTR_2g016210 34.437 151 98 1 356 505 4 154 9.66e-30 117
MsG0580028601.01.T01 MTR_1g023690 53.165 158 64 2 127 274 342 499 1.55e-29 122
MsG0580028601.01.T01 MTR_1g077300 40.645 155 89 2 354 508 2 153 1.79e-29 114
MsG0580028601.01.T01 MTR_1g077390 37.662 154 95 1 355 508 3 155 4.63e-29 112
MsG0580028601.01.T01 MTR_4g032290 44.966 149 81 1 354 501 2 150 4.70e-28 112
MsG0580028601.01.T01 MTR_5g047580 35.762 151 96 1 355 505 3 152 9.12e-28 108
MsG0580028601.01.T01 MTR_7g011950 39.355 155 93 1 354 508 2 155 1.97e-27 108
MsG0580028601.01.T01 MTR_4g032260 44.966 149 81 1 354 501 2 150 3.14e-27 107
MsG0580028601.01.T01 MTR_4g028720 38.065 155 95 1 354 508 2 155 2.08e-26 105
MsG0580028601.01.T01 MTR_3g465410 39.130 138 76 3 381 513 1 135 4.14e-26 103
MsG0580028601.01.T01 MTR_2g035610 45.378 119 65 0 355 473 3 121 1.01e-25 102
MsG0580028601.01.T01 MTR_1g084950 38.411 151 92 1 355 505 3 152 1.33e-25 103
MsG0580028601.01.T01 MTR_3g031240 33.333 153 101 1 354 505 2 154 1.43e-25 103
MsG0580028601.01.T01 MTR_1g090697 33.548 155 102 1 355 509 3 156 8.67e-25 100
MsG0580028601.01.T01 MTR_1g090783 33.548 155 102 1 355 509 2 155 7.08e-24 98.2
MsG0580028601.01.T01 MTR_1g090710 35.669 157 99 2 354 509 2 157 1.27e-23 97.4
MsG0580028601.01.T01 MTR_3g466900 37.984 129 80 0 384 512 2 130 3.93e-22 92.4
MsG0580028601.01.T01 MTR_3g466930 37.984 129 80 0 384 512 2 130 8.54e-22 91.7
MsG0580028601.01.T01 MTR_2g035580 34.211 152 100 0 354 505 2 153 8.63e-21 89.7
MsG0580028601.01.T01 MTR_3g093900 31.410 156 107 0 355 510 6 161 2.11e-20 95.1
MsG0580028601.01.T01 MTR_2g090900 39.610 154 80 4 161 311 190 333 2.95e-20 92.4
MsG0580028601.01.T01 MTR_2g090900 50.000 94 47 0 161 254 190 283 4.04e-20 91.7
MsG0580028601.01.T01 MTR_4g028800 55.714 70 29 1 356 425 4 71 2.20e-19 82.8
MsG0580028601.01.T01 MTR_7g106510 32.911 158 104 2 355 511 6 162 2.33e-19 91.3
MsG0580028601.01.T01 MTR_4g079500 47.872 94 49 0 161 254 193 286 4.03e-19 89.0
MsG0580028601.01.T01 MTR_4g019670 31.210 157 108 0 355 511 6 162 1.72e-18 89.0
MsG0580028601.01.T01 MTR_5g047560 30.464 151 88 2 355 505 3 136 5.66e-16 75.1
MsG0580028601.01.T01 MTR_1g099030 41.818 110 62 2 147 255 109 217 5.65e-15 75.9
MsG0580028601.01.T01 MTR_1g114730 33.051 118 71 4 354 464 2 118 3.58e-14 74.3
MsG0580028601.01.T01 MTR_6g018920 32.203 118 72 4 354 464 2 118 2.47e-13 71.6
MsG0580028601.01.T01 MTR_7g055790 34.579 107 52 1 355 461 61 149 3.48e-13 67.8
MsG0580028601.01.T01 MTR_8g088650 40.426 94 51 1 161 254 233 321 4.02e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028601.01.T01 AT2G40620 52.381 378 99 13 12 341 5 349 2.44e-100 307
MsG0580028601.01.T01 AT1G06850 57.249 269 88 7 97 350 70 326 3.58e-84 264
MsG0580028601.01.T01 AT2G31370 45.541 314 107 10 24 280 14 320 3.89e-64 213
MsG0580028601.01.T01 AT2G31370 45.541 314 107 10 24 280 14 320 1.88e-63 212
MsG0580028601.01.T01 AT2G31370 45.541 314 107 10 24 280 14 320 1.88e-63 212
MsG0580028601.01.T01 AT2G31370 45.541 314 107 10 24 280 14 320 1.88e-63 212
MsG0580028601.01.T01 AT2G31370 45.541 314 107 10 24 280 14 320 1.88e-63 212
MsG0580028601.01.T01 AT2G31370 45.541 314 107 10 24 280 14 320 1.88e-63 212
MsG0580028601.01.T01 AT2G31370 45.541 314 107 10 24 280 14 320 1.88e-63 212
MsG0580028601.01.T01 AT1G06070 49.609 256 80 6 54 270 73 318 2.17e-57 197
MsG0580028601.01.T01 AT1G43700 62.179 156 45 4 119 260 137 292 3.78e-47 167
MsG0580028601.01.T01 AT4G38900 67.626 139 35 2 131 259 353 491 1.22e-46 171
MsG0580028601.01.T01 AT4G38900 67.626 139 35 2 131 259 353 491 1.22e-46 171
MsG0580028601.01.T01 AT4G38900 64.828 145 35 3 131 259 353 497 3.34e-44 164
MsG0580028601.01.T01 AT2G21230 61.594 138 44 2 131 259 330 467 8.78e-41 154
MsG0580028601.01.T01 AT2G21230 61.594 138 44 2 131 259 330 467 8.78e-41 154
MsG0580028601.01.T01 AT1G06850 61.594 138 38 3 97 220 70 206 8.36e-40 144
MsG0580028601.01.T01 AT2G21230 57.639 144 46 2 131 259 330 473 5.81e-38 146
MsG0580028601.01.T01 AT2G21230 61.983 121 37 1 131 242 330 450 7.05e-35 136
MsG0580028601.01.T01 AT5G48670 39.073 151 92 0 355 505 3 153 5.54e-29 117
MsG0580028601.01.T01 AT3G05860 31.081 148 102 0 354 501 2 149 3.72e-25 103
MsG0580028601.01.T01 AT1G65300 34.722 144 94 0 355 498 2 145 5.90e-25 104
MsG0580028601.01.T01 AT3G05860 31.081 148 102 0 354 501 2 149 1.80e-24 103
MsG0580028601.01.T01 AT3G05860 31.081 148 102 0 354 501 2 149 1.93e-24 102
MsG0580028601.01.T01 AT1G65330 42.991 107 61 0 355 461 2 108 2.65e-24 103
MsG0580028601.01.T01 AT5G26650 33.333 156 104 0 356 511 2 157 1.26e-23 102
MsG0580028601.01.T01 AT1G31630 31.847 157 106 1 355 511 2 157 2.39e-23 101
MsG0580028601.01.T01 AT5G27960 32.051 156 106 0 356 511 2 157 1.00e-22 99.4
MsG0580028601.01.T01 AT5G26630 32.911 158 106 0 354 511 2 159 1.71e-22 96.3
MsG0580028601.01.T01 AT1G31640 38.655 119 68 2 355 473 2 115 7.13e-22 99.0
MsG0580028601.01.T01 AT3G58120 49.462 93 47 0 162 254 202 294 3.21e-20 92.0
MsG0580028601.01.T01 AT2G42380 48.936 94 48 0 161 254 185 278 4.92e-20 91.7
MsG0580028601.01.T01 AT2G12900 43.269 104 58 1 154 257 109 211 1.45e-19 89.0
MsG0580028601.01.T01 AT2G28700 29.730 148 104 0 354 501 2 149 3.00e-18 86.3
MsG0580028601.01.T01 AT2G40210 39.416 137 82 1 354 490 2 137 4.80e-18 86.3
MsG0580028601.01.T01 AT5G27810 33.621 116 75 2 381 496 1 114 6.53e-18 80.1
MsG0580028601.01.T01 AT2G13150 37.037 135 75 2 131 256 110 243 4.69e-17 81.6
MsG0580028601.01.T01 AT5G26580 31.333 150 89 1 356 505 4 139 1.04e-16 82.0
MsG0580028601.01.T01 AT2G12940 39.423 104 62 1 153 256 140 242 2.39e-16 80.1
MsG0580028601.01.T01 AT2G42380 46.988 83 44 0 161 243 185 267 2.52e-16 79.7
MsG0580028601.01.T01 AT5G06500 30.323 155 101 2 354 505 2 152 1.51e-15 76.6
MsG0580028601.01.T01 AT3G58120 47.500 80 42 0 162 241 202 281 2.97e-15 76.6
MsG0580028601.01.T01 AT1G22590 31.818 110 75 0 354 463 2 111 1.84e-14 71.6
MsG0580028601.01.T01 AT2G42380 43.617 94 42 1 161 254 185 267 1.06e-13 72.4
MsG0580028601.01.T01 AT2G21235 34.722 144 62 3 162 273 359 502 1.50e-13 73.6
MsG0580028601.01.T01 AT1G58110 42.353 85 49 0 171 255 238 322 1.80e-11 66.2
MsG0580028601.01.T01 AT1G58110 42.353 85 49 0 171 255 238 322 1.80e-11 66.2
MsG0580028601.01.T01 AT5G55690 41.975 81 40 2 354 427 2 82 3.53e-11 64.3
MsG0580028601.01.T01 AT5G55690 41.975 81 40 2 354 427 2 82 3.53e-11 64.3

Find 156 sgRNAs with CRISPR-Local

Find 445 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACTTCTCATTCAACTTT+TGG 0.190821 5:+83153570 None:intergenic
ATGATCTTGAACCACAAATT+TGG 0.211992 5:-83153700 MsG0580028601.01.T01:CDS
AACATCCAGTTGCCATTATT+TGG 0.230060 5:-83156397 MsG0580028601.01.T01:CDS
TTTGGATTTGAATTGGGATT+AGG 0.258134 5:+83160146 None:intergenic
TTGGATTTGAATTGGGATTA+GGG 0.289035 5:+83160147 None:intergenic
ATTTGGATTTGGATTTGAAT+TGG 0.293787 5:+83160139 None:intergenic
AGCTATGCCTCCTGATAAAT+TGG 0.296982 5:-83159724 MsG0580028601.01.T01:CDS
TGAGATGCATTGTGAGGATT+TGG 0.311548 5:+83160122 None:intergenic
GAGTTCGTTTGGGGAGATTA+TGG 0.335399 5:-83159757 MsG0580028601.01.T01:CDS
TGCTCTCCTTGCTGTGTGAT+TGG 0.345198 5:+83153817 None:intergenic
GTTGATGGGTCGAGTTCGTT+TGG 0.349009 5:-83159768 MsG0580028601.01.T01:CDS
ATTCCACCACAAGGTCCTTC+TGG 0.351170 5:-83156427 MsG0580028601.01.T01:CDS
TTTGGATTTGGATTTGAATT+GGG 0.352095 5:+83160140 None:intergenic
TTCTGAATATGAATGAGAAT+TGG 0.357804 5:+83156333 None:intergenic
TTGATGGGTCGAGTTCGTTT+GGG 0.357989 5:-83159767 MsG0580028601.01.T01:CDS
GAAGGACCTTGTGGTGGAAT+TGG 0.359677 5:+83156430 None:intergenic
CAAAGCTCAGCCAATTTATC+AGG 0.368831 5:+83159714 None:intergenic
TTGATTCAGTAAATTGCATT+TGG 0.368971 5:+83156461 None:intergenic
GCATTGTGAGGATTTGGATT+TGG 0.369319 5:+83160128 None:intergenic
TCTCATGGTTGAACATCTTT+CGG 0.376961 5:+83153612 None:intergenic
CTGATAAATTGGCTGAGCTT+TGG 0.380438 5:-83159713 MsG0580028601.01.T01:CDS
GCGAGGGAAGAGTGAGGGTT+TGG 0.388039 5:+83160052 None:intergenic
TGGAGATGGTGGAGCAGATC+CGG 0.389694 5:-83159850 MsG0580028601.01.T01:CDS
ATTTGTGGTTCAAGATCATC+AGG 0.402521 5:+83153704 None:intergenic
CGGCATAGTAATTCGGTTGA+TGG 0.408325 5:-83159783 MsG0580028601.01.T01:CDS
TGATATGAAGATGGTGCAAT+TGG 0.408742 5:-83153405 MsG0580028601.01.T01:CDS
GGAGAGCAACGTACAAGAAA+AGG 0.412101 5:-83153802 MsG0580028601.01.T01:CDS
TGATGAGATGGCATGCTAGA+TGG 0.419162 5:+83156367 None:intergenic
GTGGAGGGTGGTTGTGGTGG+TGG 0.421120 5:+83160092 None:intergenic
GAAGAGTGAGGGTTTGGCGG+TGG 0.426383 5:+83160058 None:intergenic
TGAATCGAACCAGCACACTA+TGG 0.431382 5:+83153660 None:intergenic
TGTGCTCGACGGTGGTGGGA+AGG 0.436298 5:+83160017 None:intergenic
TGAACGGATGGCCAAATTTG+TGG 0.436771 5:+83153689 None:intergenic
GGAGAAGGATGAGAGGGCTT+AGG 0.440373 5:-83153384 None:intergenic
GATGGGGAGTGACCAAATAA+TGG 0.440624 5:+83156385 None:intergenic
ATAATGGCAACTGGATGTTC+CGG 0.448057 5:+83156401 None:intergenic
GTTGATGATCCGCCGGTGAA+TGG 0.450476 5:+83159939 None:intergenic
GCCGCCGTGGAGGGTGGTTG+TGG 0.451630 5:+83160086 None:intergenic
GAAAGAAGTTGAGAGATTGA+AGG 0.452522 5:-83156536 MsG0580028601.01.T01:CDS
CAAATTTGGCCATCCGTTCA+AGG 0.457472 5:-83153686 MsG0580028601.01.T01:CDS
CGGAGTGTGCTCGACGGTGG+TGG 0.459985 5:+83160012 None:intergenic
GAGGGTGGTTGTGGTGGTGG+TGG 0.461056 5:+83160095 None:intergenic
GTGGTTGCTGCCGCCGTGGA+GGG 0.462825 5:+83160077 None:intergenic
ACCACCACAACCACCCTCCA+CGG 0.464749 5:-83160090 MsG0580028601.01.T01:CDS
GTCCCTGAAAACGACCAATC+TGG 0.466033 5:+83156296 None:intergenic
CAACCATGAGAGTTACTTGA+AGG 0.466117 5:-83153600 MsG0580028601.01.T01:CDS
GAGAAGGATGAGAGGGCTTA+GGG 0.469907 5:-83153383 None:intergenic
GAGGCACCGGCATAGTAATT+CGG 0.477726 5:-83159790 MsG0580028601.01.T01:CDS
TGCAGAAAGAGAAGGATCTT+CGG 0.478143 5:+83156237 None:intergenic
TCGTTTGGGGAGATTATGGA+TGG 0.478452 5:-83159753 MsG0580028601.01.T01:CDS
AGTGACCAAATAATGGCAAC+TGG 0.481233 5:+83156392 None:intergenic
GTTGCTCCATGGCTTGCAGA+CGG 0.483654 5:+83156725 None:intergenic
TTGCATCACTATCTTGAGGC+AGG 0.484072 5:-83153503 MsG0580028601.01.T01:CDS
AGGGAAGAGTGAGGGTTTGG+CGG 0.487102 5:+83160055 None:intergenic
ATCCGGTGAGGTCGAGGCAC+CGG 0.490393 5:-83159803 MsG0580028601.01.T01:CDS
AATATGAATGAGAATTGGTT+TGG 0.494880 5:+83156338 None:intergenic
ACGGTGGTGGGAAGGGAGAT+TGG 0.498701 5:+83160025 None:intergenic
TTATTGTAGCGAGACACAAC+AGG 0.501264 5:-83156778 MsG0580028601.01.T01:intron
ATGTGATTCATGAGAAAATG+AGG 0.503498 5:-83153433 MsG0580028601.01.T01:CDS
GATCCGGGTGGAAACGATGA+GGG 0.505257 5:-83159834 MsG0580028601.01.T01:CDS
GTGCTCGACGGTGGTGGGAA+GGG 0.509858 5:+83160018 None:intergenic
AGAAGAATCCGGTGAGGTCG+AGG 0.511220 5:-83159809 MsG0580028601.01.T01:CDS
GAGAGGTCCATCATGTCGTC+TGG 0.512123 5:+83159972 None:intergenic
TGCCCAACTGACACTATACC+AGG 0.512274 5:-83157191 MsG0580028601.01.T01:intron
TGCTCGTTCAAAAGAGAGAA+AGG 0.513956 5:-83157278 MsG0580028601.01.T01:CDS
AAGGGAGATTGGTGGTGCGA+GGG 0.518221 5:+83160036 None:intergenic
GAGTTGTAGCTTCAGTCTGT+AGG 0.522836 5:+83157218 None:intergenic
CACAAGGTCCTTCTGGTCAC+CGG 0.525022 5:-83156420 MsG0580028601.01.T01:CDS
CGTCGAGAACAAGTCATCTT+CGG 0.525043 5:+83159893 None:intergenic
GTTGCTGCCGCCGTGGAGGG+TGG 0.525810 5:+83160080 None:intergenic
GAAGGGAGATTGGTGGTGCG+AGG 0.527352 5:+83160035 None:intergenic
GAGAGCAACGTACAAGAAAA+GGG 0.528840 5:-83153801 MsG0580028601.01.T01:CDS
TTCTAGTTCATGTATATAGC+GGG 0.529677 5:+83157255 None:intergenic
TTTCCTTCAAGTAACTCTCA+TGG 0.530880 5:+83153597 None:intergenic
GCCGTGGAGGGTGGTTGTGG+TGG 0.530989 5:+83160089 None:intergenic
GAGAGATTGAAGGTTGCTAC+TGG 0.533814 5:-83156526 MsG0580028601.01.T01:CDS
GCCGGTGAATGGATCGGAAG+GGG 0.535786 5:+83159950 None:intergenic
TGAATGGATCGGAAGGGGAG+AGG 0.537969 5:+83159955 None:intergenic
TCCCCTTCCGATCCATTCAC+CGG 0.539027 5:-83159951 MsG0580028601.01.T01:CDS
GGTGGTTGCTGCCGCCGTGG+AGG 0.539358 5:+83160076 None:intergenic
GAGATGTGCTTGTTGCTCCA+TGG 0.539738 5:+83156714 None:intergenic
TACATTGACATGGATAAGCT+TGG 0.540603 5:-83159870 MsG0580028601.01.T01:CDS
AACCTGGTATAGTGTCAGTT+GGG 0.543208 5:+83157189 None:intergenic
GATGAGATGGCATGCTAGAT+GGG 0.545329 5:+83156368 None:intergenic
CCGCCGGTGAATGGATCGGA+AGG 0.545671 5:+83159948 None:intergenic
ACATGCTTGAACTCCACATA+GGG 0.545908 5:+83153742 None:intergenic
GGAGTGTGCTCGACGGTGGT+GGG 0.545945 5:+83160013 None:intergenic
GGAGATGGTGGAGCAGATCC+GGG 0.548529 5:-83159849 MsG0580028601.01.T01:CDS
TTATTACAAAATGACCAGAT+TGG 0.549243 5:-83156310 MsG0580028601.01.T01:CDS
TGCAATTGGAGAAGGATGAG+AGG 0.552324 5:-83153391 MsG0580028601.01.T01:CDS
AGTTGTAGCTTCAGTCTGTA+GGG 0.555319 5:+83157219 None:intergenic
ATGAGAGTTACTTGAAGGAA+AGG 0.555751 5:-83153595 MsG0580028601.01.T01:CDS
AAACCTGGTATAGTGTCAGT+TGG 0.558403 5:+83157188 None:intergenic
CTATGGACTCCTTGAACGGA+TGG 0.558436 5:+83153677 None:intergenic
TAAGCTCCGTCTGCAAGCCA+TGG 0.558627 5:-83156731 MsG0580028601.01.T01:CDS
GGCATAGTAATTCGGTTGAT+GGG 0.562173 5:-83159782 MsG0580028601.01.T01:CDS
GTGGTGGGAAGGGAGATTGG+TGG 0.562570 5:+83160028 None:intergenic
AATGAAATCACAACCCTATG+TGG 0.562718 5:-83153755 MsG0580028601.01.T01:CDS
CACACTATGGACTCCTTGAA+CGG 0.564303 5:+83153673 None:intergenic
TCAAGGAGTCCATAGTGTGC+TGG 0.565483 5:-83153669 MsG0580028601.01.T01:CDS
GTTTGGTGCAGTTGATGAGA+TGG 0.569320 5:+83156355 None:intergenic
TTGATCCTAAGCGTGCCAAA+AGG 0.570345 5:-83159686 MsG0580028601.01.T01:intron
TCTGAAGTGCTTAAATCCAC+AGG 0.570991 5:+83153473 None:intergenic
CCGCTTACCAGACGACATGA+TGG 0.571319 5:-83159979 MsG0580028601.01.T01:CDS
GTGGTGCGAGGGAAGAGTGA+GGG 0.571974 5:+83160047 None:intergenic
TGATCCGCCGGTGAATGGAT+CGG 0.573063 5:+83159944 None:intergenic
GAGGGAAATTGATATGAAGA+TGG 0.575041 5:-83153414 MsG0580028601.01.T01:CDS
ATGGATAAGCTTGGAGATGG+TGG 0.575379 5:-83159861 MsG0580028601.01.T01:CDS
ACGGCGAGCCTCGATGAGAT+CGG 0.578645 5:-83159918 MsG0580028601.01.T01:CDS
TGCCGGTGCCTCGACCTCAC+CGG 0.579218 5:+83159801 None:intergenic
GGTGGTGCGAGGGAAGAGTG+AGG 0.580195 5:+83160046 None:intergenic
ACCACAACCACCCTCCACGG+CGG 0.580939 5:-83160087 MsG0580028601.01.T01:CDS
ATTCACCGGCGGATCATCAA+CGG 0.584726 5:-83159937 MsG0580028601.01.T01:CDS
TGAAGGAGAATAGGATGATG+TGG 0.587839 5:-83153538 MsG0580028601.01.T01:CDS
GGACTTGACATTAGTAGCAA+AGG 0.593896 5:-83156277 MsG0580028601.01.T01:CDS
CTCTCACTTGCAGAAAGAGA+AGG 0.594947 5:+83156229 None:intergenic
TGGATGTTCCGGTGACCAGA+AGG 0.596869 5:+83156412 None:intergenic
CATCAACCGAATTACTATGC+CGG 0.601186 5:+83159784 None:intergenic
GGCGGTGGTTGCTGCCGCCG+TGG 0.602033 5:+83160073 None:intergenic
GCTCGCCGTTGATGATCCGC+CGG 0.602248 5:+83159932 None:intergenic
AGATCCGGGTGGAAACGATG+AGG 0.602416 5:-83159835 MsG0580028601.01.T01:CDS
TGGTAAGCGGAATGTGAGAT+CGG 0.602899 5:+83159992 None:intergenic
TGCATCACTATCTTGAGGCA+GGG 0.606928 5:-83153502 MsG0580028601.01.T01:CDS
GTTCTAGTTCATGTATATAG+CGG 0.607918 5:+83157254 None:intergenic
GAAGATGGTGCAATTGGAGA+AGG 0.611243 5:-83153399 MsG0580028601.01.T01:CDS
CGTTTGGGGAGATTATGGAT+GGG 0.615032 5:-83159752 MsG0580028601.01.T01:CDS
AGCTCAGCCAATTTATCAGG+AGG 0.617494 5:+83159717 None:intergenic
TCCGGGTGGAAACGATGAGG+GGG 0.617907 5:-83159832 MsG0580028601.01.T01:CDS
GCAATTGGAGAAGGATGAGA+GGG 0.619379 5:-83153390 MsG0580028601.01.T01:CDS
ATCCGGGTGGAAACGATGAG+GGG 0.624542 5:-83159833 MsG0580028601.01.T01:CDS
CACATGCTTGAACTCCACAT+AGG 0.630810 5:+83153741 None:intergenic
TATACATGAACTAGAACGCA+AGG 0.631345 5:-83157248 MsG0580028601.01.T01:CDS
TCAATTGCATCACTATCTTG+AGG 0.632807 5:-83153507 MsG0580028601.01.T01:CDS
TGAGGCAGGGAATGTTCCTG+TGG 0.633645 5:-83153489 MsG0580028601.01.T01:CDS
CAACAAGCACATCTCCGTGA+TGG 0.633902 5:-83156706 MsG0580028601.01.T01:intron
TGATGGGTCGAGTTCGTTTG+GGG 0.634252 5:-83159766 MsG0580028601.01.T01:CDS
TGTGATTCATGAGAAAATGA+GGG 0.634781 5:-83153432 MsG0580028601.01.T01:CDS
CCATCATGTCGTCTGGTAAG+CGG 0.636641 5:+83159979 None:intergenic
GGTGATAATTGTTACCATCA+CGG 0.643305 5:+83156692 None:intergenic
GACATGGATAAGCTTGGAGA+TGG 0.645716 5:-83159864 MsG0580028601.01.T01:CDS
CGGTGACCAGAAGGACCTTG+TGG 0.645804 5:+83156421 None:intergenic
GTTCTCGACGTACATTGACA+TGG 0.649912 5:-83159880 MsG0580028601.01.T01:CDS
TCATAACCAATCACACAGCA+AGG 0.650603 5:-83153823 MsG0580028601.01.T01:CDS
CGCCGGTGAATGGATCGGAA+GGG 0.655187 5:+83159949 None:intergenic
TGACCAGAAGGACCTTGTGG+TGG 0.657394 5:+83156424 None:intergenic
CTATGTGGAGTTCAAGCATG+TGG 0.662987 5:-83153740 MsG0580028601.01.T01:CDS
CTTCGGATCCGATCTCATCG+AGG 0.668290 5:+83159910 None:intergenic
GATCGGAGTGTGCTCGACGG+TGG 0.675351 5:+83160009 None:intergenic
GATGGTGGAGCAGATCCGGG+TGG 0.680229 5:-83159846 MsG0580028601.01.T01:CDS
TACGCTCCAATTCCACCACA+AGG 0.681715 5:-83156436 MsG0580028601.01.T01:CDS
ATGAGATGGCATGCTAGATG+GGG 0.693250 5:+83156369 None:intergenic
CGAGATTAAAAGATTCAGTG+TGG 0.696481 5:+83156491 None:intergenic
CCTTCCGATCCATTCACCGG+CGG 0.698144 5:-83159948 MsG0580028601.01.T01:CDS
GGTTCGATTCATGCATACTG+CGG 0.703185 5:-83153648 MsG0580028601.01.T01:CDS
TGAGATCGGAGTGTGCTCGA+CGG 0.715470 5:+83160006 None:intergenic
GGTAATTGAGATGCATTGTG+AGG 0.715502 5:+83160116 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAAAAATATAGTAAATT+GGG + Chr5:83159730-83159749 None:intergenic 10.0%
!! CAAAACTATAAAAAAAAAAA+TGG + Chr5:83158517-83158536 None:intergenic 10.0%
!!! AAAAATTATGTTTTTCTTTT+AGG + Chr5:83154695-83154714 None:intergenic 10.0%
!!! AAAATTATGTTTTTCTTTTA+GGG + Chr5:83154694-83154713 None:intergenic 10.0%
!!! ATTTAAAATAGTTAAAATGA+AGG - Chr5:83154098-83154117 MsG0580028601.01.T01:intron 10.0%
!!! CAAAATGATATTATTTTTTT+TGG - Chr5:83158765-83158784 MsG0580028601.01.T01:intron 10.0%
!!! CATATTTTTTTTTATTTAAG+TGG - Chr5:83155050-83155069 MsG0580028601.01.T01:intron 10.0%
!!! TATTTTTTTTTATTTAAGTG+GGG - Chr5:83155052-83155071 MsG0580028601.01.T01:intron 10.0%
!!! TGAATTTTTTTATTAGTTTA+TGG - Chr5:83155517-83155536 MsG0580028601.01.T01:intron 10.0%
!!! TTTAAAATAGTTAAAATGAA+GGG - Chr5:83154099-83154118 MsG0580028601.01.T01:intron 10.0%
!!! TTTCAAATTTTATATTAAAG+TGG + Chr5:83159190-83159209 None:intergenic 10.0%
!!! TTTTTATTTGGAAAATTATT+TGG - Chr5:83159409-83159428 MsG0580028601.01.T01:intron 10.0%
!! AAAAAAAAAAAACACTTTAG+TGG - Chr5:83158303-83158322 MsG0580028601.01.T01:intron 15.0%
!! ATATTATAATTATATACCAC+TGG + Chr5:83159600-83159619 None:intergenic 15.0%
!! ATTCTTAATTATTTGTTCTT+TGG - Chr5:83157536-83157555 MsG0580028601.01.T01:intron 15.0%
!! ATTGAGTGATTATATAAATT+GGG - Chr5:83154938-83154957 MsG0580028601.01.T01:intron 15.0%
!! CAATATTTACTTATATGAAA+AGG - Chr5:83159496-83159515 MsG0580028601.01.T01:intron 15.0%
!! GAAAAATATGTATACAAAAT+CGG + Chr5:83159105-83159124 None:intergenic 15.0%
!! GAGAAAAAAATATAGTAAAT+TGG + Chr5:83159731-83159750 None:intergenic 15.0%
!! TTCTTAATTATTTGTTCTTT+GGG - Chr5:83157537-83157556 MsG0580028601.01.T01:intron 15.0%
!!! AAATTATGTTTTTCTTTTAG+GGG + Chr5:83154693-83154712 None:intergenic 15.0%
!!! AAGAAAAAACATTTTTAGTT+AGG - Chr5:83155324-83155343 MsG0580028601.01.T01:intron 15.0%
!!! AATCAACATCTAATAATTTT+TGG + Chr5:83154541-83154560 None:intergenic 15.0%
!!! AGAAAAAACATTTTTAGTTA+GGG - Chr5:83155325-83155344 MsG0580028601.01.T01:intron 15.0%
!!! AGACTTAATTTATTTTTTTG+AGG - Chr5:83155084-83155103 MsG0580028601.01.T01:intron 15.0%
!!! ATTTTTAATGTATTGTAAGA+AGG + Chr5:83156945-83156964 None:intergenic 15.0%
!!! GAGATATCTTTTTTTTTTTT+GGG + Chr5:83159016-83159035 None:intergenic 15.0%
!!! TAACTAAAAATGTTTTTTCT+TGG + Chr5:83155325-83155344 None:intergenic 15.0%
!!! TATCAAGACAAATTTTTATT+TGG - Chr5:83159397-83159416 MsG0580028601.01.T01:intron 15.0%
!!! TTTTTCTTTTTATAATCGTT+AGG - Chr5:83159119-83159138 MsG0580028601.01.T01:intron 15.0%
!!! TTTTTTTTTAATAGTGATGA+GGG - Chr5:83155809-83155828 MsG0580028601.01.T01:intron 15.0%
!!! TTTTTTTTTTAATAGTGATG+AGG - Chr5:83155808-83155827 MsG0580028601.01.T01:intron 15.0%
!! AAAAAAAAGATATCTCGATA+TGG - Chr5:83159020-83159039 MsG0580028601.01.T01:intron 20.0%
!! AAAAAAATTAAGTGAAAGAG+AGG - Chr5:83154781-83154800 MsG0580028601.01.T01:intron 20.0%
!! AATTTATGATTAGAGATTAG+AGG - Chr5:83155870-83155889 MsG0580028601.01.T01:intron 20.0%
!! ACAACATTCAAAATTGAAAA+TGG - Chr5:83158226-83158245 MsG0580028601.01.T01:intron 20.0%
!! AGTTAAAAAATTTCAGCAAT+AGG + Chr5:83155447-83155466 None:intergenic 20.0%
!! ATATGTTTAAATGTGTTCAT+TGG + Chr5:83158035-83158054 None:intergenic 20.0%
!! CAAAATTGAAAATGGTAAAA+TGG - Chr5:83158234-83158253 MsG0580028601.01.T01:intron 20.0%
!! GATTGAGTGATTATATAAAT+TGG - Chr5:83154937-83154956 MsG0580028601.01.T01:intron 20.0%
!! GTTAAAAAATTTCAGCAATA+GGG + Chr5:83155446-83155465 None:intergenic 20.0%
!! TATCAATTCTTGACAAAAAA+GGG + Chr5:83158540-83158559 None:intergenic 20.0%
!! TCTTAATTATTTGTTCTTTG+GGG - Chr5:83157538-83157557 MsG0580028601.01.T01:intron 20.0%
!! TTATACAAAAAGATTCTGAA+TGG + Chr5:83155896-83155915 None:intergenic 20.0%
!! TTATCAATTCTTGACAAAAA+AGG + Chr5:83158541-83158560 None:intergenic 20.0%
!! TTCCAATTATAAACAGAATT+AGG - Chr5:83155284-83155303 MsG0580028601.01.T01:intron 20.0%
!! TTGAGTGATTATATAAATTG+GGG - Chr5:83154939-83154958 MsG0580028601.01.T01:intron 20.0%
!! TTTACTCATACTTAAATTTG+TGG - Chr5:83156775-83156794 MsG0580028601.01.T01:intron 20.0%
!!! AATTATGTTTTTCTTTTAGG+GGG + Chr5:83154692-83154711 None:intergenic 20.0%
!!! AATTGGAAATTTTTCCTAAT+TGG + Chr5:83158921-83158940 None:intergenic 20.0%
!!! AGTATTTGTTTTGGTTTAAT+TGG + Chr5:83159683-83159702 None:intergenic 20.0%
!!! AGTTTCTTACCAATTTTTAA+GGG + Chr5:83158086-83158105 None:intergenic 20.0%
!!! CGAGATATCTTTTTTTTTTT+TGG + Chr5:83159017-83159036 None:intergenic 20.0%
!!! CTTCTTAGATTTAAACTTTT+GGG - Chr5:83156150-83156169 MsG0580028601.01.T01:intron 20.0%
!!! TAGTTTCTTACCAATTTTTA+AGG + Chr5:83158087-83158106 None:intergenic 20.0%
!!! TTCTTAGATTTAAACTTTTG+GGG - Chr5:83156151-83156170 MsG0580028601.01.T01:intron 20.0%
!!! TTGTTTTGATAATTTTTGTG+TGG - Chr5:83155613-83155632 MsG0580028601.01.T01:intron 20.0%
!!! TTTTAATAAGCTATCTTAGA+TGG - Chr5:83154277-83154296 MsG0580028601.01.T01:intron 20.0%
!!! TTTTTTGGGTATTTTGTTTT+TGG + Chr5:83159002-83159021 None:intergenic 20.0%
!!! TTTTTTTTAATAGTGATGAG+GGG - Chr5:83155810-83155829 MsG0580028601.01.T01:intron 20.0%
! AAAAACATTAGTGTTTGACA+TGG - Chr5:83155981-83156000 MsG0580028601.01.T01:intron 25.0%
! AACAGTATAACACATTATTG+AGG + Chr5:83158385-83158404 None:intergenic 25.0%
! AATATAAGCCCCTTAAAAAT+TGG - Chr5:83158074-83158093 MsG0580028601.01.T01:intron 25.0%
! AATATGAATGAGAATTGGTT+TGG + Chr5:83157278-83157297 None:intergenic 25.0%
! AATTGGTAAGAAACTATTCT+TGG - Chr5:83158091-83158110 MsG0580028601.01.T01:intron 25.0%
! ACAAATAATCAAGAAGTGAT+TGG + Chr5:83156811-83156830 None:intergenic 25.0%
! ACTAACAACTATATGTGTTT+GGG + Chr5:83156046-83156065 None:intergenic 25.0%
! ATAATTGGAACAAGGAAATA+AGG + Chr5:83156583-83156602 None:intergenic 25.0%
! ATATAGCAAAAACTCATCAT+TGG - Chr5:83159069-83159088 MsG0580028601.01.T01:intron 25.0%
! ATATAGTTGTTAGTGTATCT+TGG - Chr5:83156052-83156071 MsG0580028601.01.T01:intron 25.0%
! ATATGTGTTTGGGTATTTAT+TGG + Chr5:83156036-83156055 None:intergenic 25.0%
! ATGATGATACAAATGAACAA+AGG + Chr5:83157657-83157676 None:intergenic 25.0%
! ATGTTATATATTAGCTCAGT+CGG + Chr5:83158459-83158478 None:intergenic 25.0%
! ATTTGGATTTGGATTTGAAT+TGG + Chr5:83153477-83153496 None:intergenic 25.0%
! ATTTGTATCAAACAAATCTC+AGG + Chr5:83159444-83159463 None:intergenic 25.0%
! CAAATAATCAAGAAGTGATT+GGG + Chr5:83156810-83156829 None:intergenic 25.0%
! GACCTAATTCTGTTTATAAT+TGG + Chr5:83155289-83155308 None:intergenic 25.0%
! GCAAATAACTTTAAATTCTG+AGG + Chr5:83158358-83158377 None:intergenic 25.0%
! TAATGTGTTATACTGTTACA+TGG - Chr5:83158388-83158407 MsG0580028601.01.T01:intron 25.0%
! TACTATACACATAATCACTT+CGG - Chr5:83156681-83156700 MsG0580028601.01.T01:intron 25.0%
! TATATGAGCAAACAATTCAA+TGG + Chr5:83159050-83159069 None:intergenic 25.0%
! TCTTAATTTATAGAGCCATT+GGG + Chr5:83159645-83159664 None:intergenic 25.0%
! TGAAGTTAATTAACTCAACT+GGG - Chr5:83157013-83157032 MsG0580028601.01.T01:intron 25.0%
! TGAGTGATTATATAAATTGG+GGG - Chr5:83154940-83154959 MsG0580028601.01.T01:intron 25.0%
! TGATGATACAAATGAACAAA+GGG + Chr5:83157656-83157675 None:intergenic 25.0%
! TTATTACAAAATGACCAGAT+TGG - Chr5:83157303-83157322 MsG0580028601.01.T01:CDS 25.0%
! TTCAATTGTACTAATTGTTG+TGG - Chr5:83156244-83156263 MsG0580028601.01.T01:CDS 25.0%
! TTCTGAATATGAATGAGAAT+TGG + Chr5:83157283-83157302 None:intergenic 25.0%
! TTCTTAATTTATAGAGCCAT+TGG + Chr5:83159646-83159665 None:intergenic 25.0%
! TTGAAGTTAATTAACTCAAC+TGG - Chr5:83157012-83157031 MsG0580028601.01.T01:intron 25.0%
! TTGATTCAGTAAATTGCATT+TGG + Chr5:83157155-83157174 None:intergenic 25.0%
! TTTGGATTTGGATTTGAATT+GGG + Chr5:83153476-83153495 None:intergenic 25.0%
!! CAATCTAGAATCACATAATA+AGG + Chr5:83155707-83155726 None:intergenic 25.0%
!! CAATGATGAGTATTTTTCTA+TGG - Chr5:83154009-83154028 MsG0580028601.01.T01:intron 25.0%
!! GCTTCTTAGATTTAAACTTT+TGG - Chr5:83156149-83156168 MsG0580028601.01.T01:intron 25.0%
!! GTTACTTCTTTTTCTTTCTT+CGG + Chr5:83155031-83155050 None:intergenic 25.0%
!! TATAGCTAAAAGATGACTTT+TGG - Chr5:83156600-83156619 MsG0580028601.01.T01:intron 25.0%
!! TCGTTGTATCATTGTATTTT+GGG - Chr5:83157612-83157631 MsG0580028601.01.T01:intron 25.0%
!! TCTTAGATTTAAACTTTTGG+GGG - Chr5:83156152-83156171 MsG0580028601.01.T01:intron 25.0%
!! TCTTTTTATAATCGTTAGGT+TGG - Chr5:83159123-83159142 MsG0580028601.01.T01:intron 25.0%
!!! AGTAACTCTGTTTTGTTTAT+TGG - Chr5:83156498-83156517 MsG0580028601.01.T01:CDS 25.0%
!!! AGTCATCTTTTAGCTATAAT+TGG + Chr5:83156598-83156617 None:intergenic 25.0%
!!! ATTTTTAAGGGGCTTATATT+AGG + Chr5:83158074-83158093 None:intergenic 25.0%
!!! GTTTCTTACCAATTTTTAAG+GGG + Chr5:83158085-83158104 None:intergenic 25.0%
!!! TGCTTGAATTTTTGGTATTT+CGG - Chr5:83158114-83158133 MsG0580028601.01.T01:intron 25.0%
!!! TGGTTTGAGTTTTTGTTAAT+TGG - Chr5:83154029-83154048 MsG0580028601.01.T01:intron 25.0%
!!! TTTTAGCTATAATTGGAACA+AGG + Chr5:83156591-83156610 None:intergenic 25.0%
AAGCTCAAATACGTCAAATA+TGG - Chr5:83155958-83155977 MsG0580028601.01.T01:intron 30.0%
AATAAGTTGTGAGACTATCT+AGG - Chr5:83154203-83154222 MsG0580028601.01.T01:intron 30.0%
ACGCTTGAAATTTAATTGCT+AGG - Chr5:83159315-83159334 MsG0580028601.01.T01:intron 30.0%
ACTCATAGAACTTACAAAGT+TGG + Chr5:83155742-83155761 None:intergenic 30.0%
AGAAAAAAGTGAAGGAGAAT+AGG - Chr5:83160066-83160085 MsG0580028601.01.T01:CDS 30.0%
AGCATCAGATTTATGTCAAA+AGG - Chr5:83154972-83154991 MsG0580028601.01.T01:intron 30.0%
AGGAAAGAACAATCGATATA+AGG - Chr5:83159335-83159354 MsG0580028601.01.T01:intron 30.0%
AGTATAACACATTATTGAGG+AGG + Chr5:83158382-83158401 None:intergenic 30.0%
AGTTGTACATCTGATTGTTT+GGG - Chr5:83157794-83157813 MsG0580028601.01.T01:intron 30.0%
ATAAATAGGAGTGGTCAAAA+TGG + Chr5:83154606-83154625 None:intergenic 30.0%
ATGATCTTGAACCACAAATT+TGG - Chr5:83159913-83159932 MsG0580028601.01.T01:CDS 30.0%
ATGCAGTTCTCTAATTTCAT+TGG - Chr5:83157928-83157947 MsG0580028601.01.T01:intron 30.0%
ATGTGATTCATGAGAAAATG+AGG - Chr5:83160180-83160199 MsG0580028601.01.T01:exon 30.0%
CACTAACAACTATATGTGTT+TGG + Chr5:83156047-83156066 None:intergenic 30.0%
CTAGCTATTCATAAAGTTCA+AGG + Chr5:83157845-83157864 None:intergenic 30.0%
GAAAACTCAAAGTGAGTTAT+TGG - Chr5:83158136-83158155 MsG0580028601.01.T01:intron 30.0%
GAAGTTGAAGAAAAAAGTGA+AGG - Chr5:83160058-83160077 MsG0580028601.01.T01:CDS 30.0%
GATGATACAAATGAACAAAG+GGG + Chr5:83157655-83157674 None:intergenic 30.0%
GTAAAAACTGAAAACACTCA+CGG + Chr5:83156760-83156779 None:intergenic 30.0%
GTTAAAATGAAGGGAAATTG+AGG - Chr5:83154108-83154127 MsG0580028601.01.T01:intron 30.0%
TAGTTGTACATCTGATTGTT+TGG - Chr5:83157793-83157812 MsG0580028601.01.T01:intron 30.0%
TATAAATGTCAACACAAACC+TGG + Chr5:83156443-83156462 None:intergenic 30.0%
TGCTAGATTTAAACAGATGA+GGG + Chr5:83155187-83155206 None:intergenic 30.0%
TGTGATTCATGAGAAAATGA+GGG - Chr5:83160181-83160200 MsG0580028601.01.T01:exon 30.0%
TTGCTAGATTTAAACAGATG+AGG + Chr5:83155188-83155207 None:intergenic 30.0%
TTGGATTTGAATTGGGATTA+GGG + Chr5:83153469-83153488 None:intergenic 30.0%
TTTGGATTTGAATTGGGATT+AGG + Chr5:83153470-83153489 None:intergenic 30.0%
! ATTTCCAAGACCAATTTTAC+AGG + Chr5:83155260-83155279 None:intergenic 30.0%
! CACACTGAATCTTTTAATCT+CGG - Chr5:83157123-83157142 MsG0580028601.01.T01:intron 30.0%
! CGTTGTATCATTGTATTTTG+GGG - Chr5:83157613-83157632 MsG0580028601.01.T01:intron 30.0%
! CTCGTTGTATCATTGTATTT+TGG - Chr5:83157611-83157630 MsG0580028601.01.T01:intron 30.0%
! GTAGCACAACATTTTGAATT+TGG - Chr5:83157406-83157425 MsG0580028601.01.T01:intron 30.0%
! TAGAGCATTTAACACTTTAG+TGG - Chr5:83158262-83158281 MsG0580028601.01.T01:intron 30.0%
! TCAACTTCTCATTCAACTTT+TGG + Chr5:83160046-83160065 None:intergenic 30.0%
! TTTCCAAGACCAATTTTACA+GGG + Chr5:83155259-83155278 None:intergenic 30.0%
! TTTTTCTCTTAATACCACCA+TGG - Chr5:83159743-83159762 MsG0580028601.01.T01:CDS 30.0%
!! AATGTTGCTTTGTTTGTGAA+TGG - Chr5:83156730-83156749 MsG0580028601.01.T01:CDS 30.0%
!! GTTCTAGTTCATGTATATAG+CGG + Chr5:83156362-83156381 None:intergenic 30.0%
!! TTCTAGTTCATGTATATAGC+GGG + Chr5:83156361-83156380 None:intergenic 30.0%
!!! ACATTTTTAGTTAGGGAACT+AGG - Chr5:83155332-83155351 MsG0580028601.01.T01:intron 30.0%
!!! ATTCTTGGTGCTTGAATTTT+TGG - Chr5:83158106-83158125 MsG0580028601.01.T01:intron 30.0%
!!! CTCGACTCTCTTTTTAAAAT+AGG - Chr5:83154666-83154685 MsG0580028601.01.T01:intron 30.0%
!!! TAATTGTTTTAGACCCTGTT+TGG + Chr5:83154420-83154439 None:intergenic 30.0%
!!! TTGTGGGAAAGTATTTGTTT+TGG + Chr5:83159692-83159711 None:intergenic 30.0%
!!! TTTATTTTTTTGAGGCCCAT+AGG - Chr5:83155092-83155111 MsG0580028601.01.T01:intron 30.0%
!!! TTTTTTATTTAAGTGGGGTG+TGG - Chr5:83155057-83155076 MsG0580028601.01.T01:intron 30.0%
AACATCCAGTTGCCATTATT+TGG - Chr5:83157216-83157235 MsG0580028601.01.T01:CDS 35.0%
AAGAACTCTAGTCCATGAAT+TGG + Chr5:83157737-83157756 None:intergenic 35.0%
AATAAGCTCCTTATCCAAAC+AGG - Chr5:83154403-83154422 MsG0580028601.01.T01:intron 35.0%
AATAGCTAGCATGTCATATG+AGG - Chr5:83157856-83157875 MsG0580028601.01.T01:intron 35.0%
AATCCCATGGATAAGTTAGA+AGG + Chr5:83157446-83157465 None:intergenic 35.0%
AATGAAATCACAACCCTATG+TGG - Chr5:83159858-83159877 MsG0580028601.01.T01:CDS 35.0%
ACATAATCACTTCGGTGATT+TGG - Chr5:83156689-83156708 MsG0580028601.01.T01:intron 35.0%
ACATCATCAACAAAACGTAC+AGG - Chr5:83157995-83158014 MsG0580028601.01.T01:intron 35.0%
ATAAGCTCCTTATCCAAACA+GGG - Chr5:83154404-83154423 MsG0580028601.01.T01:intron 35.0%
ATACAAATGAACAAAGGGGA+AGG + Chr5:83157651-83157670 None:intergenic 35.0%
ATCAAACAAATCTCAGGTTC+AGG + Chr5:83159438-83159457 None:intergenic 35.0%
ATGAGAGTTACTTGAAGGAA+AGG - Chr5:83160018-83160037 MsG0580028601.01.T01:CDS 35.0%
ATTATTTGACTGGGATGAGT+TGG - Chr5:83155663-83155682 MsG0580028601.01.T01:intron 35.0%
ATTTATCATTCCTCCGTTGT+GGG - Chr5:83154831-83154850 MsG0580028601.01.T01:intron 35.0%
ATTTGTGGTTCAAGATCATC+AGG + Chr5:83159912-83159931 None:intergenic 35.0%
CACGCTAACAATTTCCAATT+AGG - Chr5:83158904-83158923 MsG0580028601.01.T01:intron 35.0%
CAGATACATGACAGAATTAG+GGG + Chr5:83155396-83155415 None:intergenic 35.0%
CATAATCACTTCGGTGATTT+GGG - Chr5:83156690-83156709 MsG0580028601.01.T01:intron 35.0%
CCAGATACATGACAGAATTA+GGG + Chr5:83155397-83155416 None:intergenic 35.0%
CGAGATTAAAAGATTCAGTG+TGG + Chr5:83157125-83157144 None:intergenic 35.0%
GAAAGAAGTTGAGAGATTGA+AGG - Chr5:83157077-83157096 MsG0580028601.01.T01:intron 35.0%
GAGAGGTGAAATTTACCTAA+CGG - Chr5:83154798-83154817 MsG0580028601.01.T01:intron 35.0%
GAGGGAAATTGATATGAAGA+TGG - Chr5:83160199-83160218 MsG0580028601.01.T01:five_prime_UTR 35.0%
GATAAGTTAGAAGGTCAAGT+GGG + Chr5:83157437-83157456 None:intergenic 35.0%
GCTATGAAAAATGAATCCCA+TGG + Chr5:83157459-83157478 None:intergenic 35.0%
GCTTAACAGTTTACTATAGC+AGG + Chr5:83157823-83157842 None:intergenic 35.0%
GGTGATAATTGTTACCATCA+CGG + Chr5:83156924-83156943 None:intergenic 35.0%
GTAAGTTCTATGAGTAACTG+AGG - Chr5:83155747-83155766 MsG0580028601.01.T01:intron 35.0%
GTGATTATATAAATTGGGGG+TGG - Chr5:83154943-83154962 MsG0580028601.01.T01:intron 35.0%
GTTGTTTGTAATTGTGCTTG+TGG - Chr5:83155571-83155590 MsG0580028601.01.T01:intron 35.0%
TAAATCCAAACAACACCGTT+AGG + Chr5:83154816-83154835 None:intergenic 35.0%
TACAAATGAACAAAGGGGAA+GGG + Chr5:83157650-83157669 None:intergenic 35.0%
TACATTGACATGGATAAGCT+TGG - Chr5:83153743-83153762 MsG0580028601.01.T01:CDS 35.0%
TATACATGAACTAGAACGCA+AGG - Chr5:83156365-83156384 MsG0580028601.01.T01:CDS 35.0%
TATATAAATTGGGGGTGGTT+TGG - Chr5:83154948-83154967 MsG0580028601.01.T01:intron 35.0%
TCAAACAAATCTCAGGTTCA+GGG + Chr5:83159437-83159456 None:intergenic 35.0%
TCAATTGCATCACTATCTTG+AGG - Chr5:83160106-83160125 MsG0580028601.01.T01:CDS 35.0%
TCTCATGGTTGAACATCTTT+CGG + Chr5:83160004-83160023 None:intergenic 35.0%
TGACCTTCTAACTTATCCAT+GGG - Chr5:83157440-83157459 MsG0580028601.01.T01:intron 35.0%
TGATATGAAGATGGTGCAAT+TGG - Chr5:83160208-83160227 MsG0580028601.01.T01:five_prime_UTR 35.0%
TTCATTGACACTCCAATTCA+TGG - Chr5:83157722-83157741 MsG0580028601.01.T01:intron 35.0%
TTGACCTTCTAACTTATCCA+TGG - Chr5:83157439-83157458 MsG0580028601.01.T01:intron 35.0%
TTTCCTTCAAGTAACTCTCA+TGG + Chr5:83160019-83160038 None:intergenic 35.0%
! AAGAGAACGATGATGATGAA+TGG + Chr5:83159247-83159266 None:intergenic 35.0%
! TTCCAAGACCAATTTTACAG+GGG + Chr5:83155258-83155277 None:intergenic 35.0%
! TTTTAGACCCTGTTTGGATA+AGG + Chr5:83154414-83154433 None:intergenic 35.0%
!! ATTTACCTAACGGTGTTGTT+TGG - Chr5:83154808-83154827 MsG0580028601.01.T01:intron 35.0%
!! TAGATTTAAACTTTTGGGGG+TGG - Chr5:83156155-83156174 MsG0580028601.01.T01:intron 35.0%
!! TTCAAGTTTTACTCACCTTC+CGG - Chr5:83154470-83154489 MsG0580028601.01.T01:intron 35.0%
AAACCTGGTATAGTGTCAGT+TGG + Chr5:83156428-83156447 None:intergenic 40.0%
AACCTGGTATAGTGTCAGTT+GGG + Chr5:83156427-83156446 None:intergenic 40.0%
AATCAAACGATGTCTCCCAA+TGG - Chr5:83159627-83159646 MsG0580028601.01.T01:intron 40.0%
ACAAATGAACAAAGGGGAAG+GGG + Chr5:83157649-83157668 None:intergenic 40.0%
ACATGCTTGAACTCCACATA+GGG + Chr5:83159874-83159893 None:intergenic 40.0%
ACCACTCCTATTTATGCGAT+GGG - Chr5:83154611-83154630 MsG0580028601.01.T01:intron 40.0%
ACTCGTCGCAATTATTTGAC+TGG - Chr5:83155653-83155672 MsG0580028601.01.T01:intron 40.0%
AGCCTCCTATTTCATAGGAA+CGG + Chr5:83154648-83154667 None:intergenic 40.0%
AGCTATGCCTCCTGATAAAT+TGG - Chr5:83153889-83153908 MsG0580028601.01.T01:intron 40.0%
AGTAAATTGGGAGAGCAAGA+AGG + Chr5:83159718-83159737 None:intergenic 40.0%
AGTGACCAAATAATGGCAAC+TGG + Chr5:83157224-83157243 None:intergenic 40.0%
AGTTGTAGCTTCAGTCTGTA+GGG + Chr5:83156397-83156416 None:intergenic 40.0%
ATAATGGCAACTGGATGTTC+CGG + Chr5:83157215-83157234 None:intergenic 40.0%
CAAAGCTCAGCCAATTTATC+AGG + Chr5:83153902-83153921 None:intergenic 40.0%
CAACCATGAGAGTTACTTGA+AGG - Chr5:83160013-83160032 MsG0580028601.01.T01:CDS 40.0%
CATCAACCGAATTACTATGC+CGG + Chr5:83153832-83153851 None:intergenic 40.0%
CCACGTTGTTCTATGTAGAT+GGG - Chr5:83156127-83156146 MsG0580028601.01.T01:intron 40.0%
CCAGTCAACATATGTACTTC+AGG - Chr5:83157487-83157506 MsG0580028601.01.T01:intron 40.0%
CCCTAATTCTGTCATGTATC+TGG - Chr5:83155394-83155413 MsG0580028601.01.T01:intron 40.0%
CCTGAAGTACATATGTTGAC+TGG + Chr5:83157490-83157509 None:intergenic 40.0%
CTCGTCGCAATTATTTGACT+GGG - Chr5:83155654-83155673 MsG0580028601.01.T01:intron 40.0%
CTGATAAATTGGCTGAGCTT+TGG - Chr5:83153900-83153919 MsG0580028601.01.T01:intron 40.0%
GAACAAGAATTGTTCTGCAC+AGG + Chr5:83154453-83154472 None:intergenic 40.0%
GAACAAGGAAATAAGGCTCA+AGG + Chr5:83156576-83156595 None:intergenic 40.0%
GAGAGCAACGTACAAGAAAA+GGG - Chr5:83159812-83159831 MsG0580028601.01.T01:CDS 40.0%
GAGAGCAAGAAGGAAATTGT+GGG + Chr5:83159708-83159727 None:intergenic 40.0%
GATTTATCATTCCTCCGTTG+TGG - Chr5:83154830-83154849 MsG0580028601.01.T01:intron 40.0%
GCACGTAAAAAATGAGACGA+GGG + Chr5:83159225-83159244 None:intergenic 40.0%
GCATTGTGAGGATTTGGATT+TGG + Chr5:83153488-83153507 None:intergenic 40.0%
GCCAGATACATGACAGAATT+AGG + Chr5:83155398-83155417 None:intergenic 40.0%
GGAAAGGAGAAGGAAACAAA+TGG - Chr5:83154852-83154871 MsG0580028601.01.T01:intron 40.0%
GGACTTGACATTAGTAGCAA+AGG - Chr5:83157336-83157355 MsG0580028601.01.T01:intron 40.0%
GGATAAGTTAGAAGGTCAAG+TGG + Chr5:83157438-83157457 None:intergenic 40.0%
GGCATAGTAATTCGGTTGAT+GGG - Chr5:83153831-83153850 MsG0580028601.01.T01:CDS 40.0%
GGTAATTGAGATGCATTGTG+AGG + Chr5:83153500-83153519 None:intergenic 40.0%
GTATCTGGCTACATGTTCAA+TGG - Chr5:83155409-83155428 MsG0580028601.01.T01:intron 40.0%
TCATAACCAATCACACAGCA+AGG - Chr5:83159790-83159809 MsG0580028601.01.T01:CDS 40.0%
TCCACGTTGTTCTATGTAGA+TGG - Chr5:83156126-83156145 MsG0580028601.01.T01:intron 40.0%
TGAAGGAGAATAGGATGATG+TGG - Chr5:83160075-83160094 MsG0580028601.01.T01:CDS 40.0%
TGAGATGCATTGTGAGGATT+TGG + Chr5:83153494-83153513 None:intergenic 40.0%
TGCTCGTTCAAAAGAGAGAA+AGG - Chr5:83156335-83156354 MsG0580028601.01.T01:CDS 40.0%
TGGTATCACCCCTGTAAAAT+TGG - Chr5:83155247-83155266 MsG0580028601.01.T01:intron 40.0%
TTATTGTAGCGAGACACAAC+AGG - Chr5:83156835-83156854 MsG0580028601.01.T01:intron 40.0%
TTCACTCCCATCGCATAAAT+AGG + Chr5:83154620-83154639 None:intergenic 40.0%
TTTGGCATTAACCCTCCTTA+GGG + Chr5:83154523-83154542 None:intergenic 40.0%
! AATTTTACAGGGGTGATACC+AGG + Chr5:83155248-83155267 None:intergenic 40.0%
! ATTCTGAGGAATGAAGCTTG+TGG + Chr5:83158344-83158363 None:intergenic 40.0%
! ATTTTACAGGGGTGATACCA+GGG + Chr5:83155247-83155266 None:intergenic 40.0%
! GAAGTACATATGTTGACTGG+AGG + Chr5:83157487-83157506 None:intergenic 40.0%
! GGGAACTAGTTCTCAATGAA+GGG + Chr5:83155376-83155395 None:intergenic 40.0%
! TCTGAAGTGCTTAAATCCAC+AGG + Chr5:83160143-83160162 None:intergenic 40.0%
! TTTTGGCATTAACCCTCCTT+AGG + Chr5:83154524-83154543 None:intergenic 40.0%
!! ATGAGTAACTGAGGCATTGT+TGG - Chr5:83155756-83155775 MsG0580028601.01.T01:intron 40.0%
!! ATTTAAACTTTTGGGGGTGG+AGG - Chr5:83156158-83156177 MsG0580028601.01.T01:intron 40.0%
!!! TTTTTGAGGCCCATAGGTTT+TGG - Chr5:83155098-83155117 MsG0580028601.01.T01:intron 40.0%
AACTTCGCAGCAAAACCCTA+CGG + Chr5:83157587-83157606 None:intergenic 45.0%
AATGCATGAGTGTTTGCCAG+TGG - Chr5:83159581-83159600 MsG0580028601.01.T01:intron 45.0%
AGCTCAGCCAATTTATCAGG+AGG + Chr5:83153899-83153918 None:intergenic 45.0%
AGTCGAGCCTCCTATTTCAT+AGG + Chr5:83154653-83154672 None:intergenic 45.0%
AGTTGTGCTAAGGGTCTGTT+TGG - Chr5:83154167-83154186 MsG0580028601.01.T01:intron 45.0%
ATGAGATGGCATGCTAGATG+GGG + Chr5:83157247-83157266 None:intergenic 45.0%
ATGGATAAGCTTGGAGATGG+TGG - Chr5:83153752-83153771 MsG0580028601.01.T01:CDS 45.0%
CAAATTTGGCCATCCGTTCA+AGG - Chr5:83159927-83159946 MsG0580028601.01.T01:CDS 45.0%
CAATCTGTCGAACCTTCTCT+CGG - Chr5:83154144-83154163 MsG0580028601.01.T01:intron 45.0%
CACACTATGGACTCCTTGAA+CGG + Chr5:83159943-83159962 None:intergenic 45.0%
CACATGCTTGAACTCCACAT+AGG + Chr5:83159875-83159894 None:intergenic 45.0%
CCCATCTACATAGAACAACG+TGG + Chr5:83156130-83156149 None:intergenic 45.0%
CGGCATAGTAATTCGGTTGA+TGG - Chr5:83153830-83153849 MsG0580028601.01.T01:CDS 45.0%
CGTCGAGAACAAGTCATCTT+CGG + Chr5:83153723-83153742 None:intergenic 45.0%
CGTTTGGGGAGATTATGGAT+GGG - Chr5:83153861-83153880 MsG0580028601.01.T01:intron 45.0%
CTATGTGGAGTTCAAGCATG+TGG - Chr5:83159873-83159892 MsG0580028601.01.T01:CDS 45.0%
CTTCACTTTCTTTCCTGCCA+TGG + Chr5:83159763-83159782 None:intergenic 45.0%
GAAGATGGTGCAATTGGAGA+AGG - Chr5:83160214-83160233 MsG0580028601.01.T01:five_prime_UTR 45.0%
GACATGGATAAGCTTGGAGA+TGG - Chr5:83153749-83153768 MsG0580028601.01.T01:CDS 45.0%
GACCACTCCTATTTATGCGA+TGG - Chr5:83154610-83154629 MsG0580028601.01.T01:intron 45.0%
GAGAGATTGAAGGTTGCTAC+TGG - Chr5:83157087-83157106 MsG0580028601.01.T01:intron 45.0%
GAGTTCGTTTGGGGAGATTA+TGG - Chr5:83153856-83153875 MsG0580028601.01.T01:intron 45.0%
GAGTTGTAGCTTCAGTCTGT+AGG + Chr5:83156398-83156417 None:intergenic 45.0%
GATGAGATGGCATGCTAGAT+GGG + Chr5:83157248-83157267 None:intergenic 45.0%
GATGGGGAGTGACCAAATAA+TGG + Chr5:83157231-83157250 None:intergenic 45.0%
GCAATTGGAGAAGGATGAGA+GGG - Chr5:83160223-83160242 MsG0580028601.01.T01:five_prime_UTR 45.0%
GGAGAGCAACGTACAAGAAA+AGG - Chr5:83159811-83159830 MsG0580028601.01.T01:CDS 45.0%
GGAGAGCAAGAAGGAAATTG+TGG + Chr5:83159709-83159728 None:intergenic 45.0%
GGCACGTAAAAAATGAGACG+AGG + Chr5:83159226-83159245 None:intergenic 45.0%
GGTTCGATTCATGCATACTG+CGG - Chr5:83159965-83159984 MsG0580028601.01.T01:CDS 45.0%
GTGGAGGATAATGTGAGAGT+GGG - Chr5:83156174-83156193 MsG0580028601.01.T01:intron 45.0%
GTTCTCGACGTACATTGACA+TGG - Chr5:83153733-83153752 MsG0580028601.01.T01:CDS 45.0%
TCCCATCGCATAAATAGGAG+TGG + Chr5:83154615-83154634 None:intergenic 45.0%
TCGTTTGGGGAGATTATGGA+TGG - Chr5:83153860-83153879 MsG0580028601.01.T01:intron 45.0%
TCTCTTAATACCACCATGGC+AGG - Chr5:83159747-83159766 MsG0580028601.01.T01:CDS 45.0%
TGAACGGATGGCCAAATTTG+TGG + Chr5:83159927-83159946 None:intergenic 45.0%
TGAATCGAACCAGCACACTA+TGG + Chr5:83159956-83159975 None:intergenic 45.0%
TGATGAGATGGCATGCTAGA+TGG + Chr5:83157249-83157268 None:intergenic 45.0%
TGCAATTGGAGAAGGATGAG+AGG - Chr5:83160222-83160241 MsG0580028601.01.T01:five_prime_UTR 45.0%
TGCATCACTATCTTGAGGCA+GGG - Chr5:83160111-83160130 MsG0580028601.01.T01:CDS 45.0%
TGGAGGATAATGTGAGAGTG+GGG - Chr5:83156175-83156194 MsG0580028601.01.T01:intron 45.0%
TGGTAAGCGGAATGTGAGAT+CGG + Chr5:83153624-83153643 None:intergenic 45.0%
TTATGCGATGGGAGTGAACA+GGG - Chr5:83154622-83154641 MsG0580028601.01.T01:intron 45.0%
TTCCTTCTCCTTTCCCACAA+CGG + Chr5:83154847-83154866 None:intergenic 45.0%
TTCTCTCGGAGTTGTGCTAA+GGG - Chr5:83154158-83154177 MsG0580028601.01.T01:intron 45.0%
TTGATCCTAAGCGTGCCAAA+AGG - Chr5:83153927-83153946 MsG0580028601.01.T01:intron 45.0%
TTGCATCACTATCTTGAGGC+AGG - Chr5:83160110-83160129 MsG0580028601.01.T01:CDS 45.0%
TTGGCATTAACCCTCCTTAG+GGG + Chr5:83154522-83154541 None:intergenic 45.0%
TTTATGCGATGGGAGTGAAC+AGG - Chr5:83154621-83154640 MsG0580028601.01.T01:intron 45.0%
! CACCCCTGTAAAATTGGTCT+TGG - Chr5:83155253-83155272 MsG0580028601.01.T01:intron 45.0%
! CATTTCGCGAACGAACCTTT+TGG + Chr5:83153945-83153964 None:intergenic 45.0%
! GGGGAACTAGTTCTCAATGA+AGG + Chr5:83155377-83155396 None:intergenic 45.0%
! TTGATGGGTCGAGTTCGTTT+GGG - Chr5:83153846-83153865 MsG0580028601.01.T01:CDS 45.0%
! TTTGGGGTGCTCGCTAAAAA+GGG - Chr5:83157554-83157573 MsG0580028601.01.T01:intron 45.0%
!! GACCAGATTGGTCGTTTTCA+GGG - Chr5:83157315-83157334 MsG0580028601.01.T01:intron 45.0%
!! GTTTGGTGCAGTTGATGAGA+TGG + Chr5:83157261-83157280 None:intergenic 45.0%
!! TGACCAGATTGGTCGTTTTC+AGG - Chr5:83157314-83157333 MsG0580028601.01.T01:intron 45.0%
!!! ATATTTTTTTTTATTTAAGT+GGG - Chr5:83155051-83155070 MsG0580028601.01.T01:intron 5.0%
!!! ATTTTTATTAACTTATATAT+AGG - Chr5:83158834-83158853 MsG0580028601.01.T01:intron 5.0%
!!! TAATTTTTTTTTTAAAGAAT+TGG + Chr5:83158938-83158957 None:intergenic 5.0%
!!! TCTTTTTATTAATTTATTTA+TGG + Chr5:83158967-83158986 None:intergenic 5.0%
!!! TTATTTATTTTTACATATAA+CGG + Chr5:83158485-83158504 None:intergenic 5.0%
!!! TTTTTTTTTTTATTAGTTTA+GGG - Chr5:83154074-83154093 MsG0580028601.01.T01:intron 5.0%
!!! TTTTTTTTTTTTATTAGTTT+AGG - Chr5:83154073-83154092 MsG0580028601.01.T01:intron 5.0%
ACTTCGCAGCAAAACCCTAC+GGG + Chr5:83157586-83157605 None:intergenic 50.0%
ATCGACAGTTAGAGTGACCC+TGG - Chr5:83155227-83155246 MsG0580028601.01.T01:intron 50.0%
ATTCACCGGCGGATCATCAA+CGG - Chr5:83153676-83153695 MsG0580028601.01.T01:CDS 50.0%
ATTCCACCACAAGGTCCTTC+TGG - Chr5:83157186-83157205 MsG0580028601.01.T01:intron 50.0%
CAACAAGCACATCTCCGTGA+TGG - Chr5:83156907-83156926 MsG0580028601.01.T01:intron 50.0%
CACTTTCTTTCCTGCCATGG+TGG + Chr5:83159760-83159779 None:intergenic 50.0%
CAGGGCCGTTCCTATGAAAT+AGG - Chr5:83154640-83154659 MsG0580028601.01.T01:intron 50.0%
CCATCATGTCGTCTGGTAAG+CGG + Chr5:83153637-83153656 None:intergenic 50.0%
CCTGTAATCCGGAATTTGGC+CGG + Chr5:83154492-83154511 None:intergenic 50.0%
CTATGGACTCCTTGAACGGA+TGG + Chr5:83159939-83159958 None:intergenic 50.0%
CTTAGCACAACTCCGAGAGA+AGG + Chr5:83154159-83154178 None:intergenic 50.0%
CTTCTCTCGGAGTTGTGCTA+AGG - Chr5:83154157-83154176 MsG0580028601.01.T01:intron 50.0%
GAGGCCTGTAATCCGGAATT+TGG + Chr5:83154496-83154515 None:intergenic 50.0%
GGCCGTTCCTATGAAATAGG+AGG - Chr5:83154643-83154662 MsG0580028601.01.T01:intron 50.0%
GGGTTAAGTGTTTCACTCCC+AGG + Chr5:83155167-83155186 None:intergenic 50.0%
GGTGGAGGATAATGTGAGAG+TGG - Chr5:83156173-83156192 MsG0580028601.01.T01:intron 50.0%
GTCCCTGAAAACGACCAATC+TGG + Chr5:83157320-83157339 None:intergenic 50.0%
GTGGTCAAAATGGCTGCTAG+TGG + Chr5:83154596-83154615 None:intergenic 50.0%
TAACCCTCCTTAGGGGAAAG+AGG + Chr5:83154515-83154534 None:intergenic 50.0%
TAATCCGGAATTTGGCCGGA+AGG + Chr5:83154488-83154507 None:intergenic 50.0%
TACGCTCCAATTCCACCACA+AGG - Chr5:83157177-83157196 MsG0580028601.01.T01:intron 50.0%
TCAAGGAGTCCATAGTGTGC+TGG - Chr5:83159944-83159963 MsG0580028601.01.T01:CDS 50.0%
TCATTCCTCCGTTGTGGGAA+AGG - Chr5:83154836-83154855 MsG0580028601.01.T01:intron 50.0%
TGCCCAACTGACACTATACC+AGG - Chr5:83156422-83156441 MsG0580028601.01.T01:CDS 50.0%
TTACAGGCCTCTTTCCCCTA+AGG - Chr5:83154505-83154524 MsG0580028601.01.T01:intron 50.0%
! AAAGCAGTGGCGAGCTTTTG+GGG + Chr5:83158433-83158452 None:intergenic 50.0%
! ACGAACCTTTTGGCACGCTT+AGG + Chr5:83153935-83153954 None:intergenic 50.0%
! GAAAGCAGTGGCGAGCTTTT+GGG + Chr5:83158434-83158453 None:intergenic 50.0%
! GAAGGACCTTGTGGTGGAAT+TGG + Chr5:83157186-83157205 None:intergenic 50.0%
! GAGATGTGCTTGTTGCTCCA+TGG + Chr5:83156902-83156921 None:intergenic 50.0%
! GTTGATGGGTCGAGTTCGTT+TGG - Chr5:83153845-83153864 MsG0580028601.01.T01:CDS 50.0%
! TGAAAGCAGTGGCGAGCTTT+TGG + Chr5:83158435-83158454 None:intergenic 50.0%
! TGATGGGTCGAGTTCGTTTG+GGG - Chr5:83153847-83153866 MsG0580028601.01.T01:CDS 50.0%
! TGCTCTCCTTGCTGTGTGAT+TGG + Chr5:83159799-83159818 None:intergenic 50.0%
! TTGGGGTGCTCGCTAAAAAG+GGG - Chr5:83157555-83157574 MsG0580028601.01.T01:intron 50.0%
!! AAAAAGGGGAAGCACCCGTA+GGG - Chr5:83157569-83157588 MsG0580028601.01.T01:intron 50.0%
!! CTTTGGGGTGCTCGCTAAAA+AGG - Chr5:83157553-83157572 MsG0580028601.01.T01:intron 50.0%
!! GAGGCACCGGCATAGTAATT+CGG - Chr5:83153823-83153842 MsG0580028601.01.T01:CDS 50.0%
!! TAAAAAGGGGAAGCACCCGT+AGG - Chr5:83157568-83157587 MsG0580028601.01.T01:intron 50.0%
!! TTGAGGCCCATAGGTTTTGG+AGG - Chr5:83155101-83155120 MsG0580028601.01.T01:intron 50.0%
AAGTGTTTCACTCCCAGGCC+CGG + Chr5:83155162-83155181 None:intergenic 55.0%
AGAAGAATCCGGTGAGGTCG+AGG - Chr5:83153804-83153823 MsG0580028601.01.T01:CDS 55.0%
AGATCCGGGTGGAAACGATG+AGG - Chr5:83153778-83153797 MsG0580028601.01.T01:CDS 55.0%
AGGCCTCTTTCCCCTAAGGA+GGG - Chr5:83154509-83154528 MsG0580028601.01.T01:intron 55.0%
AGGGAAGAGTGAGGGTTTGG+CGG + Chr5:83153561-83153580 None:intergenic 55.0%
ATCCGGGTGGAAACGATGAG+GGG - Chr5:83153780-83153799 MsG0580028601.01.T01:CDS 55.0%
CACAAGGTCCTTCTGGTCAC+CGG - Chr5:83157193-83157212 MsG0580028601.01.T01:CDS 55.0%
CCGCTTACCAGACGACATGA+TGG - Chr5:83153634-83153653 MsG0580028601.01.T01:CDS 55.0%
CCGGCCAAATTCCGGATTAC+AGG - Chr5:83154489-83154508 MsG0580028601.01.T01:intron 55.0%
CGATGAGGGGGAGAAGAATC+CGG - Chr5:83153793-83153812 MsG0580028601.01.T01:CDS 55.0%
CTCACCTTCCGGCCAAATTC+CGG - Chr5:83154481-83154500 MsG0580028601.01.T01:intron 55.0%
CTCCGTTGTGGGAAAGGAGA+AGG - Chr5:83154842-83154861 MsG0580028601.01.T01:intron 55.0%
CTTCGGATCCGATCTCATCG+AGG + Chr5:83153706-83153725 None:intergenic 55.0%
CTTCTCCTTTCCCACAACGG+AGG + Chr5:83154844-83154863 None:intergenic 55.0%
GAGAGGTCCATCATGTCGTC+TGG + Chr5:83153644-83153663 None:intergenic 55.0%
GATCCGGGTGGAAACGATGA+GGG - Chr5:83153779-83153798 MsG0580028601.01.T01:CDS 55.0%
GCTCAGTCGGTTGAAAGCAG+TGG + Chr5:83158446-83158465 None:intergenic 55.0%
GGGGAAAGAGGCCTGTAATC+CGG + Chr5:83154503-83154522 None:intergenic 55.0%
TAAGCTCCGTCTGCAAGCCA+TGG - Chr5:83156882-83156901 MsG0580028601.01.T01:intron 55.0%
TCCCCTTCCGATCCATTCAC+CGG - Chr5:83153662-83153681 MsG0580028601.01.T01:CDS 55.0%
TGAATGGATCGGAAGGGGAG+AGG + Chr5:83153661-83153680 None:intergenic 55.0%
TGACCAGAAGGACCTTGTGG+TGG + Chr5:83157192-83157211 None:intergenic 55.0%
TGAGATCGGAGTGTGCTCGA+CGG + Chr5:83153610-83153629 None:intergenic 55.0%
TGAGGCAGGGAATGTTCCTG+TGG - Chr5:83160124-83160143 MsG0580028601.01.T01:CDS 55.0%
TGATCCGCCGGTGAATGGAT+CGG + Chr5:83153672-83153691 None:intergenic 55.0%
TGGATGTTCCGGTGACCAGA+AGG + Chr5:83157204-83157223 None:intergenic 55.0%
! AAGCAGTGGCGAGCTTTTGG+GGG + Chr5:83158432-83158451 None:intergenic 55.0%
! GTTGCTCCATGGCTTGCAGA+CGG + Chr5:83156891-83156910 None:intergenic 55.0%
!! AAGGGAGATTGGTGGTGCGA+GGG + Chr5:83153580-83153599 None:intergenic 55.0%
!! GTTGATGATCCGCCGGTGAA+TGG + Chr5:83153677-83153696 None:intergenic 55.0%
!! TGGAGATGGTGGAGCAGATC+CGG - Chr5:83153763-83153782 MsG0580028601.01.T01:CDS 55.0%
ACCACCACAACCACCCTCCA+CGG - Chr5:83153523-83153542 MsG0580028601.01.T01:CDS 60.0%
ACGGCGAGCCTCGATGAGAT+CGG - Chr5:83153695-83153714 MsG0580028601.01.T01:CDS 60.0%
AGCCGGGCCTCCAAAACCTA+TGG + Chr5:83155111-83155130 None:intergenic 60.0%
AGGGGGAGAAGAATCCGGTG+AGG - Chr5:83153798-83153817 MsG0580028601.01.T01:CDS 60.0%
CAGGCCTCTTTCCCCTAAGG+AGG - Chr5:83154508-83154527 MsG0580028601.01.T01:intron 60.0%
CCTTCCGATCCATTCACCGG+CGG - Chr5:83153665-83153684 MsG0580028601.01.T01:CDS 60.0%
CGCAAGCAGCTCAACCAAGC+CGG + Chr5:83155128-83155147 None:intergenic 60.0%
CGCCGGTGAATGGATCGGAA+GGG + Chr5:83153667-83153686 None:intergenic 60.0%
CGGTGACCAGAAGGACCTTG+TGG + Chr5:83157195-83157214 None:intergenic 60.0%
GAAGAGTGAGGGTTTGGCGG+TGG + Chr5:83153558-83153577 None:intergenic 60.0%
GCAAGCAGCTCAACCAAGCC+GGG + Chr5:83155127-83155146 None:intergenic 60.0%
GCCGGGCCTCCAAAACCTAT+GGG + Chr5:83155110-83155129 None:intergenic 60.0%
GCCGGTGAATGGATCGGAAG+GGG + Chr5:83153666-83153685 None:intergenic 60.0%
GCGAGGGAAGAGTGAGGGTT+TGG + Chr5:83153564-83153583 None:intergenic 60.0%
GTGGTGCGAGGGAAGAGTGA+GGG + Chr5:83153569-83153588 None:intergenic 60.0%
TCCCCCTCATCGTTTCCACC+CGG + Chr5:83153785-83153804 None:intergenic 60.0%
TCCGGGTGGAAACGATGAGG+GGG - Chr5:83153781-83153800 MsG0580028601.01.T01:CDS 60.0%
! AGCAGTGGCGAGCTTTTGGG+GGG + Chr5:83158431-83158450 None:intergenic 60.0%
! GTGGTGGGAAGGGAGATTGG+TGG + Chr5:83153588-83153607 None:intergenic 60.0%
!! ACGGTGGTGGGAAGGGAGAT+TGG + Chr5:83153591-83153610 None:intergenic 60.0%
!! GAAGGGAGATTGGTGGTGCG+AGG + Chr5:83153581-83153600 None:intergenic 60.0%
!! GGAGATGGTGGAGCAGATCC+GGG - Chr5:83153764-83153783 MsG0580028601.01.T01:CDS 60.0%
!!! GCCCATAGGTTTTGGAGGCC+CGG - Chr5:83155106-83155125 MsG0580028601.01.T01:intron 60.0%
!!! TAGGTTTTGGAGGCCCGGCT+TGG - Chr5:83155111-83155130 MsG0580028601.01.T01:intron 60.0%
ACCACAACCACCCTCCACGG+CGG - Chr5:83153526-83153545 MsG0580028601.01.T01:CDS 65.0%
ATCCGGTGAGGTCGAGGCAC+CGG - Chr5:83153810-83153829 MsG0580028601.01.T01:CDS 65.0%
CCGCCGGTGAATGGATCGGA+AGG + Chr5:83153668-83153687 None:intergenic 65.0%
GATCGGAGTGTGCTCGACGG+TGG + Chr5:83153607-83153626 None:intergenic 65.0%
GGAGTGTGCTCGACGGTGGT+GGG + Chr5:83153603-83153622 None:intergenic 65.0%
GGTGGTGCGAGGGAAGAGTG+AGG + Chr5:83153570-83153589 None:intergenic 65.0%
GTGGAGGGTGGTTGTGGTGG+TGG + Chr5:83153524-83153543 None:intergenic 65.0%
!! GAGGGTGGTTGTGGTGGTGG+TGG + Chr5:83153521-83153540 None:intergenic 65.0%
!! GATGGTGGAGCAGATCCGGG+TGG - Chr5:83153767-83153786 MsG0580028601.01.T01:CDS 65.0%
!! GCTCGCCGTTGATGATCCGC+CGG + Chr5:83153684-83153703 None:intergenic 65.0%
!! GTGCTCGACGGTGGTGGGAA+GGG + Chr5:83153598-83153617 None:intergenic 65.0%
!! TGTGCTCGACGGTGGTGGGA+AGG + Chr5:83153599-83153618 None:intergenic 65.0%
CGGAGTGTGCTCGACGGTGG+TGG + Chr5:83153604-83153623 None:intergenic 70.0%
GAGCTGCTTGCGCACCCCCA+AGG - Chr5:83155136-83155155 MsG0580028601.01.T01:intron 70.0%
GCCGTGGAGGGTGGTTGTGG+TGG + Chr5:83153527-83153546 None:intergenic 70.0%
GTGGTTGCTGCCGCCGTGGA+GGG + Chr5:83153539-83153558 None:intergenic 70.0%
TCACTCCCAGGCCCGGCCTT+GGG + Chr5:83155155-83155174 None:intergenic 70.0%
TGCCGGTGCCTCGACCTCAC+CGG + Chr5:83153815-83153834 None:intergenic 70.0%
TGCTTGCGCACCCCCAAGGC+CGG - Chr5:83155140-83155159 MsG0580028601.01.T01:intron 70.0%
TTCACTCCCAGGCCCGGCCT+TGG + Chr5:83155156-83155175 None:intergenic 70.0%
ACTCCCAGGCCCGGCCTTGG+GGG + Chr5:83155153-83155172 None:intergenic 75.0%
CACTCCCAGGCCCGGCCTTG+GGG + Chr5:83155154-83155173 None:intergenic 75.0%
GCCGCCGTGGAGGGTGGTTG+TGG + Chr5:83153530-83153549 None:intergenic 75.0%
GCTTGCGCACCCCCAAGGCC+GGG - Chr5:83155141-83155160 MsG0580028601.01.T01:intron 75.0%
GGTGGTTGCTGCCGCCGTGG+AGG + Chr5:83153540-83153559 None:intergenic 75.0%
GTTGCTGCCGCCGTGGAGGG+TGG + Chr5:83153536-83153555 None:intergenic 75.0%
! GCACCCCCAAGGCCGGGCCT+GGG - Chr5:83155147-83155166 MsG0580028601.01.T01:intron 80.0%
! GGCGGTGGTTGCTGCCGCCG+TGG + Chr5:83153543-83153562 None:intergenic 80.0%
! CGCACCCCCAAGGCCGGGCC+TGG - Chr5:83155146-83155165 MsG0580028601.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr5 gene 83153385 83160250 83153385 ID=MsG0580028601.01;Name=MsG0580028601.01
Chr5 mRNA 83153385 83160250 83153385 ID=MsG0580028601.01.T01;Parent=MsG0580028601.01;Name=MsG0580028601.01.T01;_AED=0.34;_eAED=0.34;_QI=61|0.75|0.6|1|1|1|5|0|514
Chr5 exon 83153385 83153866 83153385 ID=MsG0580028601.01.T01:exon:33320;Parent=MsG0580028601.01.T01
Chr5 exon 83156236 83156577 83156236 ID=MsG0580028601.01.T01:exon:33319;Parent=MsG0580028601.01.T01
Chr5 exon 83156707 83156791 83156707 ID=MsG0580028601.01.T01:exon:33318;Parent=MsG0580028601.01.T01
Chr5 exon 83157192 83157324 83157192 ID=MsG0580028601.01.T01:exon:33317;Parent=MsG0580028601.01.T01
Chr5 exon 83159687 83160250 83159687 ID=MsG0580028601.01.T01:exon:33316;Parent=MsG0580028601.01.T01
Chr5 five_prime_UTR 83160190 83160250 83160190 ID=MsG0580028601.01.T01:five_prime_utr;Parent=MsG0580028601.01.T01
Chr5 CDS 83159687 83160189 83159687 ID=MsG0580028601.01.T01:cds;Parent=MsG0580028601.01.T01
Chr5 CDS 83157192 83157324 83157192 ID=MsG0580028601.01.T01:cds;Parent=MsG0580028601.01.T01
Chr5 CDS 83156707 83156791 83156707 ID=MsG0580028601.01.T01:cds;Parent=MsG0580028601.01.T01
Chr5 CDS 83156236 83156577 83156236 ID=MsG0580028601.01.T01:cds;Parent=MsG0580028601.01.T01
Chr5 CDS 83153385 83153866 83153385 ID=MsG0580028601.01.T01:cds;Parent=MsG0580028601.01.T01
Gene Sequence

>MsG0580028601.01.T01

ATGCAACATCAATCTTCAAACCCTAATCCCAATTCAAATCCAAATCCAAATCCTCACAATGCATCTCAATTACCACCACCACCACAACCACCCTCCACGGCGGCAGCAACCACCGCCAAACCCTCACTCTTCCCTCGCACCACCAATCTCCCTTCCCACCACCGTCGAGCACACTCCGATCTCACATTCCGCTTACCAGACGACATGATGGACCTCTCCCCTTCCGATCCATTCACCGGCGGATCATCAACGGCGAGCCTCGATGAGATCGGATCCGAAGATGACTTGTTCTCGACGTACATTGACATGGATAAGCTTGGAGATGGTGGAGCAGATCCGGGTGGAAACGATGAGGGGGAGAAGAATCCGGTGAGGTCGAGGCACCGGCATAGTAATTCGGTTGATGGGTCGAGTTCGTTTGGGGAGATTATGGATGGGAAGAAAGCTATGCCTCCTGATAAATTGGCTGAGCTTTGGTCTGTTGATCCTAAGCGTGCCAAAAGAATACTTGCTAATCGACAATCTGCTGCTCGTTCAAAAGAGAGAAAGGCCCGCTATATACATGAACTAGAACGCAAGGTTCAGACCCTACAGACTGAAGCTACAACTCTTTCTGCCCAACTGACACTATACCAGCGAGACACAACAGGTCTGAGTACTGAAAATACAGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAAGCACATCTCCGTGATGCTCTTAATGATGCATTGAAGAAAGAAGTTGAGAGATTGAAGGTTGCTACTGGCGATATAATGAGCCACACTGAATCTTTTAATCTCGGTATGCACCAAATGCAATTTACTGAATCAAATTACGCTCCAATTCCACCACAAGGTCCTTCTGGTCACCGGAACATCCAGTTGCCATTATTTGGTCACTCCCCATCTAGCATGCCATCTCATCAACTGCACCAAACCAATTCTCATTCATATTCAGAATTATTACAAAATGACCAGATTGGTCGTTTTCAGGGACTTGACATTAGTAGCAAAGGAACAGCTGTTGTAAAGTCCGAAGATCCTTCTCTTTCTGCAAGAAAGAAAGTGAAGCTTGCATTCATAACCAATCACACAGCAAGGAGAGCAACGTACAAGAAAAGGGTACAAAGTTTGATGAAGAAGCTCAATGAAATCACAACCCTATGTGGAGTTCAAGCATGTGGTATAGTTTTCAAGCCTGATGATCTTGAACCACAAATTTGGCCATCCGTTCAAGGAGTCCATAGTGTGCTGGTTCGATTCATGCATACTGCGGACTTCGATCGAGACCGAAAGATGTTCAACCATGAGAGTTACTTGAAGGAAAGGATCCAAAAGTTGAATGAGAAGTTGAAGAAAAAAGTGAAGGAGAATAGGATGATGTGGATGAGTGTTCAATTGCATCACTATCTTGAGGCAGGGAATGTTCCTGTGGATTTAAGCACTTCAGATATGAATGATCTCACATATGTGATTCATGAGAAAATGAGGGAAATTGATATGAAGATGGTGCAATTGGAGAAGGATGAGAGGGCTTAG
Protein sequence

>MsG0580028601.01.T01

MQHQSSNPNPNSNPNPNPHNASQLPPPPQPPSTAAATTAKPSLFPRTTNLPSHHRRAHSDLTFRLPDDMMDLSPSDPFTGGSSTASLDEIGSEDDLFSTYIDMDKLGDGGADPGGNDEGEKNPVRSRHRHSNSVDGSSSFGEIMDGKKAMPPDKLAELWSVDPKRAKRILANRQSAARSKERKARYIHELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAHLRDALNDALKKEVERLKVATGDIMSHTESFNLGMHQMQFTESNYAPIPPQGPSGHRNIQLPLFGHSPSSMPSHQLHQTNSHSYSELLQNDQIGRFQGLDISSKGTAVVKSEDPSLSARKKVKLAFITNHTARRATYKKRVQSLMKKLNEITTLCGVQACGIVFKPDDLEPQIWPSVQGVHSVLVRFMHTADFDRDRKMFNHESYLKERIQKLNEKLKKKVKENRMMWMSVQLHHYLEAGNVPVDLSTSDMNDLTYVIHEKMREIDMKMVQLEKDERA*