AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040054.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040054.01.T01 MTR_7g083790 98.391 373 3 1 1 370 1 373 0.0 740
MsG0780040054.01.T01 MTR_8g099910 77.654 358 75 2 6 363 5 357 0.0 563
MsG0780040054.01.T01 MTR_6g033280 71.633 349 89 2 11 358 3 342 0.0 517
MsG0780040054.01.T01 MTR_4g094578 43.253 289 162 1 74 360 24 312 1.69e-87 267
MsG0780040054.01.T01 MTR_5g024770 46.643 283 129 1 71 353 13 273 1.86e-86 264
MsG0780040054.01.T01 MTR_6g034515 29.008 262 150 9 89 331 77 321 4.17e-16 79.3
MsG0780040054.01.T01 MTR_3g107510 26.339 224 156 5 44 264 86 303 1.17e-15 78.2
MsG0780040054.01.T01 MTR_2g436930 24.686 239 155 4 79 295 15 250 2.00e-13 70.9
MsG0780040054.01.T01 MTR_2g436930 26.263 198 119 7 75 249 125 318 5.66e-11 63.5
MsG0780040054.01.T01 MTR_1g012030 27.322 183 129 3 82 264 142 320 4.16e-13 70.5
MsG0780040054.01.T01 MTR_8g076760 25.714 210 121 7 68 253 105 303 4.20e-13 69.7
MsG0780040054.01.T01 MTR_8g027975 27.863 262 166 9 73 315 43 300 4.43e-13 70.1
MsG0780040054.01.T01 MTR_8g027975 24.737 190 119 5 86 251 160 349 4.83e-12 67.0
MsG0780040054.01.T01 MTR_5g009500 25.789 190 119 5 86 253 147 336 4.66e-13 70.1
MsG0780040054.01.T01 MTR_5g009500 27.984 243 149 9 71 295 28 262 4.11e-12 67.0
MsG0780040054.01.T01 MTR_4g119770 23.750 240 158 4 79 295 14 251 5.59e-13 68.6
MsG0780040054.01.T01 MTR_7g084400 30.493 223 142 6 75 293 210 423 7.52e-13 70.1
MsG0780040054.01.T01 MTR_4g119770 23.750 240 158 4 79 295 14 251 9.84e-13 68.9
MsG0780040054.01.T01 MTR_4g119770 24.390 205 126 7 75 255 126 325 5.07e-11 63.5
MsG0780040054.01.T01 MTR_8g096050 30.734 218 136 7 80 293 229 435 1.91e-12 68.9
MsG0780040054.01.T01 MTR_7g084400 30.729 192 126 4 75 262 204 392 3.36e-12 67.8
MsG0780040054.01.T01 MTR_7g109135 30.000 190 114 7 89 264 34 218 3.53e-12 65.9
MsG0780040054.01.T01 MTR_3g098460 30.000 220 135 8 80 293 207 413 3.64e-12 67.8
MsG0780040054.01.T01 MTR_7g109135 28.421 190 117 6 89 264 133 317 4.13e-12 67.0
MsG0780040054.01.T01 MTR_7g109135 28.421 190 117 6 89 264 55 239 5.82e-12 65.5
MsG0780040054.01.T01 MTR_4g114320 25.824 182 124 4 82 259 126 300 2.07e-11 65.1
MsG0780040054.01.T01 MTR_2g436930 26.263 198 119 7 75 249 35 228 3.16e-11 63.2
MsG0780040054.01.T01 MTR_5g073040 25.874 286 184 7 80 350 41 313 8.76e-11 62.8
MsG0780040054.01.T01 MTR_1g087840 27.746 173 105 6 93 251 33 199 9.25e-11 62.8
MsG0780040054.01.T02 MTR_7g083790 98.391 373 3 1 1 370 1 373 0.0 740
MsG0780040054.01.T02 MTR_8g099910 77.654 358 75 2 6 363 5 357 0.0 563
MsG0780040054.01.T02 MTR_6g033280 71.633 349 89 2 11 358 3 342 0.0 517
MsG0780040054.01.T02 MTR_4g094578 43.253 289 162 1 74 360 24 312 1.69e-87 267
MsG0780040054.01.T02 MTR_5g024770 46.643 283 129 1 71 353 13 273 1.86e-86 264
MsG0780040054.01.T02 MTR_6g034515 29.008 262 150 9 89 331 77 321 4.17e-16 79.3
MsG0780040054.01.T02 MTR_3g107510 26.339 224 156 5 44 264 86 303 1.17e-15 78.2
MsG0780040054.01.T02 MTR_2g436930 24.686 239 155 4 79 295 15 250 2.00e-13 70.9
MsG0780040054.01.T02 MTR_2g436930 26.263 198 119 7 75 249 125 318 5.66e-11 63.5
MsG0780040054.01.T02 MTR_1g012030 27.322 183 129 3 82 264 142 320 4.16e-13 70.5
MsG0780040054.01.T02 MTR_8g076760 25.714 210 121 7 68 253 105 303 4.20e-13 69.7
MsG0780040054.01.T02 MTR_8g027975 27.863 262 166 9 73 315 43 300 4.43e-13 70.1
MsG0780040054.01.T02 MTR_8g027975 24.737 190 119 5 86 251 160 349 4.83e-12 67.0
MsG0780040054.01.T02 MTR_5g009500 25.789 190 119 5 86 253 147 336 4.66e-13 70.1
MsG0780040054.01.T02 MTR_5g009500 27.984 243 149 9 71 295 28 262 4.11e-12 67.0
MsG0780040054.01.T02 MTR_4g119770 23.750 240 158 4 79 295 14 251 5.59e-13 68.6
MsG0780040054.01.T02 MTR_7g084400 30.493 223 142 6 75 293 210 423 7.52e-13 70.1
MsG0780040054.01.T02 MTR_4g119770 23.750 240 158 4 79 295 14 251 9.84e-13 68.9
MsG0780040054.01.T02 MTR_4g119770 24.390 205 126 7 75 255 126 325 5.07e-11 63.5
MsG0780040054.01.T02 MTR_8g096050 30.734 218 136 7 80 293 229 435 1.91e-12 68.9
MsG0780040054.01.T02 MTR_7g084400 30.729 192 126 4 75 262 204 392 3.36e-12 67.8
MsG0780040054.01.T02 MTR_7g109135 30.000 190 114 7 89 264 34 218 3.53e-12 65.9
MsG0780040054.01.T02 MTR_3g098460 30.000 220 135 8 80 293 207 413 3.64e-12 67.8
MsG0780040054.01.T02 MTR_7g109135 28.421 190 117 6 89 264 133 317 4.13e-12 67.0
MsG0780040054.01.T02 MTR_7g109135 28.421 190 117 6 89 264 55 239 5.82e-12 65.5
MsG0780040054.01.T02 MTR_4g114320 25.824 182 124 4 82 259 126 300 2.07e-11 65.1
MsG0780040054.01.T02 MTR_2g436930 26.263 198 119 7 75 249 35 228 3.16e-11 63.2
MsG0780040054.01.T02 MTR_5g073040 25.874 286 184 7 80 350 41 313 8.76e-11 62.8
MsG0780040054.01.T02 MTR_1g087840 27.746 173 105 6 93 251 33 199 9.25e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040054.01.T01 AT5G14040 78.904 365 69 2 7 363 2 366 0.0 574
MsG0780040054.01.T01 AT3G48850 68.820 356 108 1 7 362 2 354 0.0 510
MsG0780040054.01.T01 AT2G17270 50.993 302 143 3 68 368 11 308 4.86e-107 317
MsG0780040054.01.T01 AT5G66380 26.636 214 122 8 68 258 102 303 5.65e-14 72.4
MsG0780040054.01.T01 AT5G51050 29.474 285 168 12 80 348 225 492 6.70e-14 73.2
MsG0780040054.01.T01 AT1G25380 27.895 190 121 6 89 266 131 316 2.94e-13 70.9
MsG0780040054.01.T01 AT1G25380 27.895 190 121 6 89 266 131 316 2.94e-13 70.9
MsG0780040054.01.T01 AT3G53940 28.729 181 114 6 80 251 182 356 8.84e-13 69.3
MsG0780040054.01.T01 AT4G01100 25.794 252 157 8 71 295 32 280 1.39e-12 68.6
MsG0780040054.01.T01 AT1G79900 25.253 198 144 3 67 264 98 291 1.40e-12 68.2
MsG0780040054.01.T01 AT4G01100 26.778 239 157 8 71 295 32 266 1.99e-12 68.2
MsG0780040054.01.T01 AT5G48970 25.373 201 120 6 75 249 132 328 1.28e-11 65.5
MsG0780040054.01.T01 AT5G48970 23.431 239 159 4 80 295 23 260 2.94e-11 64.7
MsG0780040054.01.T01 AT5G48970 25.373 201 120 6 75 249 61 257 1.29e-11 64.7
MsG0780040054.01.T01 AT4G01100 25.571 219 149 6 88 295 1 216 3.88e-11 63.9
MsG0780040054.01.T01 AT4G32400 28.261 184 117 4 72 249 205 379 4.38e-11 64.3
MsG0780040054.01.T01 AT2G47490 27.174 184 122 5 91 265 129 309 8.68e-11 62.8
MsG0780040054.01.T01 AT1G07030 27.374 179 120 4 74 249 36 207 8.96e-11 62.8
MsG0780040054.01.T02 AT5G14040 78.904 365 69 2 7 363 2 366 0.0 574
MsG0780040054.01.T02 AT3G48850 68.820 356 108 1 7 362 2 354 0.0 510
MsG0780040054.01.T02 AT2G17270 50.993 302 143 3 68 368 11 308 4.86e-107 317
MsG0780040054.01.T02 AT5G66380 26.636 214 122 8 68 258 102 303 5.65e-14 72.4
MsG0780040054.01.T02 AT5G51050 29.474 285 168 12 80 348 225 492 6.70e-14 73.2
MsG0780040054.01.T02 AT1G25380 27.895 190 121 6 89 266 131 316 2.94e-13 70.9
MsG0780040054.01.T02 AT1G25380 27.895 190 121 6 89 266 131 316 2.94e-13 70.9
MsG0780040054.01.T02 AT3G53940 28.729 181 114 6 80 251 182 356 8.84e-13 69.3
MsG0780040054.01.T02 AT4G01100 25.794 252 157 8 71 295 32 280 1.39e-12 68.6
MsG0780040054.01.T02 AT1G79900 25.253 198 144 3 67 264 98 291 1.40e-12 68.2
MsG0780040054.01.T02 AT4G01100 26.778 239 157 8 71 295 32 266 1.99e-12 68.2
MsG0780040054.01.T02 AT5G48970 25.373 201 120 6 75 249 132 328 1.28e-11 65.5
MsG0780040054.01.T02 AT5G48970 23.431 239 159 4 80 295 23 260 2.94e-11 64.7
MsG0780040054.01.T02 AT5G48970 25.373 201 120 6 75 249 61 257 1.29e-11 64.7
MsG0780040054.01.T02 AT4G01100 25.571 219 149 6 88 295 1 216 3.88e-11 63.9
MsG0780040054.01.T02 AT4G32400 28.261 184 117 4 72 249 205 379 4.38e-11 64.3
MsG0780040054.01.T02 AT2G47490 27.174 184 122 5 91 265 129 309 8.68e-11 62.8
MsG0780040054.01.T02 AT1G07030 27.374 179 120 4 74 249 36 207 8.96e-11 62.8

Find 32 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCACTCCTCTGTTTATTTA+TGG 0.158551 7:+72489086 None:intergenic
AATAACAAATGCAAGAAAAT+TGG 0.248025 7:+72489002 None:intergenic
CTATAAATTGTCGTCATTGT+TGG 0.356180 7:+72489145 None:intergenic
ATAGTTTGCTTAAGAAACTT+AGG 0.383933 7:-72489126 MsG0780040054.01.T01:three_prime_UTR
ACTTAGGAAACCAGCGAATA+GGG 0.387534 7:-72489110 MsG0780040054.01.T01:three_prime_UTR
ACGTCAAGTTTAAAATCATT+CGG 0.409363 7:+72488322 None:intergenic
TCCTTTGCAATCTCTGCAAT+GGG 0.410320 7:+72489177 None:intergenic
ATTCCGGATGAAAATTAATC+AGG 0.416921 7:+72488785 None:intergenic
TTGATCCTTTAGCTTTACTT+TGG 0.419961 7:+72488193 None:intergenic
AACTTAGGAAACCAGCGAAT+AGG 0.424333 7:-72489111 MsG0780040054.01.T01:three_prime_UTR
TATTTATGGTCCCTATTCGC+TGG 0.424921 7:+72489100 None:intergenic
CTTGAGTTCTCAAGCATGGT+TGG 0.445500 7:-72489056 MsG0780040054.01.T01:three_prime_UTR
TTCCTTTGCAATCTCTGCAA+TGG 0.446057 7:+72489176 None:intergenic
GCAATCTCTGCAATGGGAGC+AGG 0.456052 7:+72489183 None:intergenic
CACTACACGCCTCTGTCAAA+AGG 0.475676 7:-72488891 MsG0780040054.01.T01:three_prime_UTR
GGAGCAGCACCACCGGTTGT+TGG 0.480665 7:+72489204 None:intergenic
ATATTTGTTAGGCCAACAAC+CGG 0.488505 7:-72489216 MsG0780040054.01.T01:intron
TTGCTGAAAACTTCGTAGCT+AGG 0.507807 7:-72488940 MsG0780040054.01.T01:three_prime_UTR
TTGTTGTCTATGCATAAGCA+TGG 0.519073 7:-72488854 MsG0780040054.01.T01:three_prime_UTR
GGGAGCAGGAGCAGCACCAC+CGG 0.526192 7:+72489197 None:intergenic
TTATATGTATGTGATGTGAT+AGG 0.554564 7:-72488221 MsG0780040054.01.T01:three_prime_UTR
AAGGACCAAAGTAAAGCTAA+AGG 0.554829 7:-72488198 MsG0780040054.01.T01:three_prime_UTR
GTTGCTTGAGTTCTCAAGCA+TGG 0.562493 7:-72489060 MsG0780040054.01.T01:three_prime_UTR
TGTTGTCTATGCATAAGCAT+GGG 0.584430 7:-72488853 MsG0780040054.01.T01:three_prime_UTR
GACCTTAGCAAAACATGGTG+TGG 0.617316 7:+72488246 None:intergenic
TCCCATTGCAGAGATTGCAA+AGG 0.636460 7:-72489178 MsG0780040054.01.T01:CDS
TAAACGACCTTAGCAAAACA+TGG 0.657485 7:+72488241 None:intergenic
TTTGTTAGGCCAACAACCGG+TGG 0.658305 7:-72489213 MsG0780040054.01.T01:intron
ATGTATGTGATGTGATAGGA+AGG 0.658361 7:-72488217 MsG0780040054.01.T01:three_prime_UTR
TGTCTATGCATAAGCATGGG+TGG 0.661496 7:-72488850 MsG0780040054.01.T01:three_prime_UTR
AAATAAACAGAGGAGTGCTG+AGG 0.681529 7:-72489082 MsG0780040054.01.T01:three_prime_UTR
TAGGGACCATAAATAAACAG+AGG 0.701316 7:-72489092 MsG0780040054.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAATATAAAATATAAA+AGG + Chr7:72492113-72492132 None:intergenic 0.0%
!! AATTAATATAAAATATAAAA+GGG + Chr7:72492112-72492131 None:intergenic 0.0%
!!! AATTTTTTGTTATATTTGTT+AGG - Chr7:72491471-72491490 MsG0780040054.01.T01:intron 10.0%
!! AAAATAACAAAAAAGGATTA+TGG + Chr7:72490709-72490728 None:intergenic 15.0%
!!! GCATTTGTTATTTTAAATTT+TGG - Chr7:72491707-72491726 MsG0780040054.01.T01:intron 15.0%
!!! TTGTTATTTTAAATTTTGGT+AGG - Chr7:72491711-72491730 MsG0780040054.01.T01:intron 15.0%
!!! TTTTTTTTTTTTCAATTGCA+GGG + Chr7:72492353-72492372 None:intergenic 15.0%
!!! TTTTTTTTTTTTTCAATTGC+AGG + Chr7:72492354-72492373 None:intergenic 15.0%
!! AATAACAAATGCAAGAAAAT+TGG + Chr7:72491699-72491718 None:intergenic 20.0%
!! AATTACTAGTATTGTTAAAC+TGG - Chr7:72489583-72489602 MsG0780040054.01.T01:CDS 20.0%
!! ACATCAAACATGTTATTAAT+CGG + Chr7:72492148-72492167 None:intergenic 20.0%
!! ACTAAATATATTATGATTGC+AGG - Chr7:72490151-72490170 MsG0780040054.01.T01:intron 20.0%
!! ACTAATAAAATCGAAATTCT+AGG + Chr7:72488907-72488926 None:intergenic 20.0%
!! GCTGTTAAAATTTATCATTT+AGG - Chr7:72490454-72490473 MsG0780040054.01.T01:intron 20.0%
!! TGTGATGAAATATTCATATT+TGG - Chr7:72489050-72489069 MsG0780040054.01.T01:three_prime_UTR 20.0%
!! TGTTGAAGATTATTCATATT+TGG - Chr7:72489311-72489330 MsG0780040054.01.T01:intron 20.0%
!! TTTGTAATAAATAGCATTTG+CGG + Chr7:72489484-72489503 None:intergenic 20.0%
!!! TATTTTAAATTTTGGTAGGA+TGG - Chr7:72491715-72491734 MsG0780040054.01.T01:intron 20.0%
!!! TGATATATTTGTTCTAAAGT+GGG - Chr7:72491432-72491451 MsG0780040054.01.T01:intron 20.0%
!!! TTTTAGAAAATTCATTCAAG+AGG - Chr7:72490503-72490522 MsG0780040054.01.T01:intron 20.0%
!!! TTTTTTTTTTTCAATTGCAG+GGG + Chr7:72492352-72492371 None:intergenic 20.0%
! AACATGTTATTAATCGGATT+TGG + Chr7:72492142-72492161 None:intergenic 25.0%
! AAGAAAACTGCAAAATTCAA+TGG + Chr7:72488960-72488979 None:intergenic 25.0%
! AATAGGAAGATAACTTATGA+TGG - Chr7:72490883-72490902 MsG0780040054.01.T01:CDS 25.0%
! AATTGTAGAAACAAAGTGAT+TGG - Chr7:72488225-72488244 MsG0780040054.01.T01:three_prime_UTR 25.0%
! CTAAAGACATTCAAAAGAAT+GGG + Chr7:72490560-72490579 None:intergenic 25.0%
! TAATAACATGTTTGATGTAG+TGG - Chr7:72492150-72492169 MsG0780040054.01.T01:CDS 25.0%
! TAGAAGATATATGAGTAAGT+AGG + Chr7:72490746-72490765 None:intergenic 25.0%
! TAGAATTGGAATTGTTTAGT+TGG - Chr7:72489621-72489640 MsG0780040054.01.T01:CDS 25.0%
! TCTAAAGACATTCAAAAGAA+TGG + Chr7:72490561-72490580 None:intergenic 25.0%
! TGAATGTTGTTGAATTGTTA+TGG - Chr7:72488781-72488800 MsG0780040054.01.T01:intron 25.0%
! TGATTGTGATACTGTTATAT+TGG - Chr7:72488813-72488832 MsG0780040054.01.T01:intron 25.0%
! TTAATGAAAGAAGAATAGCT+TGG + Chr7:72492047-72492066 None:intergenic 25.0%
! TTATATGTATGTGATGTGAT+AGG - Chr7:72492477-72492496 MsG0780040054.01.T01:five_prime_UTR 25.0%
!! ACGTCAAGTTTAAAATCATT+CGG + Chr7:72492379-72492398 None:intergenic 25.0%
!! ATGATATAATTTTGCGTGTT+AGG - Chr7:72491782-72491801 MsG0780040054.01.T01:intron 25.0%
!! TGATATAATTTTGCGTGTTA+GGG - Chr7:72491783-72491802 MsG0780040054.01.T01:intron 25.0%
!! TTACCTGATTAATTTTCATC+CGG - Chr7:72491910-72491929 MsG0780040054.01.T01:intron 25.0%
!! TTATATCCTTGACAAACTTT+TGG + Chr7:72490532-72490551 None:intergenic 25.0%
!! TTTTACCAACAAAAACATTC+CGG + Chr7:72491932-72491951 None:intergenic 25.0%
!!! ATAGTTTGCTTAAGAAACTT+AGG - Chr7:72491572-72491591 MsG0780040054.01.T01:intron 25.0%
!!! GCGATTTATGTTTGATTTTA+AGG - Chr7:72488706-72488725 MsG0780040054.01.T01:intron 25.0%
!!! GTGATATATTTGTTCTAAAG+TGG - Chr7:72491431-72491450 MsG0780040054.01.T01:intron 25.0%
!!! GTTTTACATGTCTTATTATC+AGG + Chr7:72490926-72490945 None:intergenic 25.0%
!!! TTTGATTTTTGTTGATCTAG+TGG - Chr7:72488991-72489010 MsG0780040054.01.T01:three_prime_UTR 25.0%
AAGTACTATTCTGATATTGC+TGG - Chr7:72489847-72489866 MsG0780040054.01.T01:intron 30.0%
ACAGCAAAAATATCAACAGA+CGG + Chr7:72490439-72490458 None:intergenic 30.0%
AGAAAAATTGATCTCAATCG+AGG + Chr7:72491884-72491903 None:intergenic 30.0%
ATGATTCCTTCATTTCTCTA+CGG - Chr7:72488375-72488394 MsG0780040054.01.T01:intron 30.0%
ATTCCGGATGAAAATTAATC+AGG + Chr7:72491916-72491935 None:intergenic 30.0%
CAAAAAAATGATGTGCAAAC+TGG + Chr7:72490331-72490350 None:intergenic 30.0%
CTATAAATTGTCGTCATTGT+TGG + Chr7:72491556-72491575 None:intergenic 30.0%
CTCATTGGTATGAATATTGA+TGG - Chr7:72490797-72490816 MsG0780040054.01.T01:CDS 30.0%
CTTCAAATGTAGAACTTACA+TGG + Chr7:72490216-72490235 None:intergenic 30.0%
GTGTTCCAATCATAACAATA+CGG + Chr7:72491335-72491354 None:intergenic 30.0%
TAAAACTCATAAGTAGAAGC+AGG + Chr7:72490488-72490507 None:intergenic 30.0%
TCAAAATCTCAACAGAGTAA+AGG + Chr7:72489265-72489284 None:intergenic 30.0%
TGAGAAATGATGAAACTCAT+TGG - Chr7:72490782-72490801 MsG0780040054.01.T01:CDS 30.0%
TGTCATTATGTGTTACGAAT+AGG - Chr7:72490866-72490885 MsG0780040054.01.T01:CDS 30.0%
! AGATTCAGCAATTTAAGACT+AGG + Chr7:72489522-72489541 None:intergenic 30.0%
! AGTCAACCTTTAGAAATTCA+TGG - Chr7:72492196-72492215 MsG0780040054.01.T01:CDS 30.0%
! ATAAAGGAGTACAAAACTGT+TGG - Chr7:72492227-72492246 MsG0780040054.01.T01:CDS 30.0%
! ATAACTTATGATGGAACCTA+AGG - Chr7:72490892-72490911 MsG0780040054.01.T01:CDS 30.0%
! ATGAAGGAATCATGTTTCTA+CGG + Chr7:72488368-72488387 None:intergenic 30.0%
! CTTATAGATTTGCTCAACAA+TGG + Chr7:72491001-72491020 None:intergenic 30.0%
! TAAAGGAGTACAAAACTGTT+GGG - Chr7:72492228-72492247 MsG0780040054.01.T01:CDS 30.0%
! TAACTTATGATGGAACCTAA+GGG - Chr7:72490893-72490912 MsG0780040054.01.T01:CDS 30.0%
! TAGATCTGAGAAATGCTTTT+AGG - Chr7:72488752-72488771 MsG0780040054.01.T01:intron 30.0%
!! AGTCTGTTGATATTTTGAGT+AGG - Chr7:72489020-72489039 MsG0780040054.01.T01:three_prime_UTR 30.0%
!! CTTGTTGTATGTTAAGTTGA+AGG - Chr7:72488863-72488882 MsG0780040054.01.T01:three_prime_UTR 30.0%
!! GGTGTTTATTTGATTTGTGA+TGG - Chr7:72488727-72488746 MsG0780040054.01.T01:intron 30.0%
!!! ATTTTGTCGTTTTTAACCAC+AGG + Chr7:72489193-72489212 None:intergenic 30.0%
AAGGACCAAAGTAAAGCTAA+AGG - Chr7:72492500-72492519 MsG0780040054.01.T01:five_prime_UTR 35.0%
AAGGCAGCTAGAATAACAAA+AGG + Chr7:72489246-72489265 None:intergenic 35.0%
AGAAGGAATCATGAATCTAC+CGG + Chr7:72488496-72488515 None:intergenic 35.0%
AGCACTCCTCTGTTTATTTA+TGG + Chr7:72491615-72491634 None:intergenic 35.0%
ATCTATGCTAGGAATTAGGA+TGG - Chr7:72490122-72490141 MsG0780040054.01.T01:intron 35.0%
ATGCTTTCAAAGTCTTTGTG+GGG - Chr7:72491382-72491401 MsG0780040054.01.T01:intron 35.0%
ATGTATGTGATGTGATAGGA+AGG - Chr7:72492481-72492500 MsG0780040054.01.T01:five_prime_UTR 35.0%
ATTCATGATTCCTTCTCCTA+AGG - Chr7:72488500-72488519 MsG0780040054.01.T01:intron 35.0%
CAATCATAACAATACGGAGA+GGG + Chr7:72491329-72491348 None:intergenic 35.0%
CACTGTAACCAAGTAATGTA+GGG + Chr7:72489786-72489805 None:intergenic 35.0%
CTTAGTCAAGTGTAATATGC+AGG - Chr7:72488629-72488648 MsG0780040054.01.T01:intron 35.0%
CTTGATCTATGCTAGGAATT+AGG - Chr7:72490118-72490137 MsG0780040054.01.T01:intron 35.0%
GATGCTTTCAAAGTCTTTGT+GGG - Chr7:72491381-72491400 MsG0780040054.01.T01:intron 35.0%
GGTGCAAAAGCAAAAGAATT+GGG - Chr7:72488246-72488265 MsG0780040054.01.T01:three_prime_UTR 35.0%
GTTATGATTGGAACACTTAC+CGG - Chr7:72491339-72491358 MsG0780040054.01.T01:intron 35.0%
TAAACGACCTTAGCAAAACA+TGG + Chr7:72492460-72492479 None:intergenic 35.0%
TAGGGACCATAAATAAACAG+AGG - Chr7:72491606-72491625 MsG0780040054.01.T01:intron 35.0%
TCTATGCTAGGAATTAGGAT+GGG - Chr7:72490123-72490142 MsG0780040054.01.T01:intron 35.0%
TCTGGTCCATGAATTTCTAA+AGG + Chr7:72492205-72492224 None:intergenic 35.0%
TGATGCTTTCAAAGTCTTTG+TGG - Chr7:72491380-72491399 MsG0780040054.01.T01:intron 35.0%
TGGTGCAAAAGCAAAAGAAT+TGG - Chr7:72488245-72488264 MsG0780040054.01.T01:three_prime_UTR 35.0%
TGTTAAACTGGTTGTGTTGT+TGG - Chr7:72489595-72489614 MsG0780040054.01.T01:CDS 35.0%
TGTTATCTACTGTTTGATGC+AGG - Chr7:72491260-72491279 MsG0780040054.01.T01:intron 35.0%
TGTTGTCTATGCATAAGCAT+GGG - Chr7:72491845-72491864 MsG0780040054.01.T01:intron 35.0%
TTACACTTGACTAAGTCAAG+AGG + Chr7:72488624-72488643 None:intergenic 35.0%
TTGAAGCAAGTTTGGAAAAG+TGG - Chr7:72492276-72492295 MsG0780040054.01.T01:CDS 35.0%
TTGTTGTCTATGCATAAGCA+TGG - Chr7:72491844-72491863 MsG0780040054.01.T01:intron 35.0%
! AACTTATGATGGAACCTAAG+GGG - Chr7:72490894-72490913 MsG0780040054.01.T01:CDS 35.0%
! ATATTTGTTAGGCCAACAAC+CGG - Chr7:72491482-72491501 MsG0780040054.01.T01:intron 35.0%
! ATGTGTATTCCTTTTGACAG+AGG + Chr7:72491819-72491838 None:intergenic 35.0%
! GCATGAATTTGAAGCAAGTT+TGG - Chr7:72492268-72492287 MsG0780040054.01.T01:CDS 35.0%
! GCTTTTCTTCTTCGTTTTCT+TGG - Chr7:72488656-72488675 MsG0780040054.01.T01:intron 35.0%
! GTAGATCAAGGTCTTGTATT+TGG + Chr7:72489887-72489906 None:intergenic 35.0%
! TACAAAACTGTTGGGCATTT+TGG - Chr7:72492236-72492255 MsG0780040054.01.T01:CDS 35.0%
! TTTTGTACTCCTTTATGCTC+TGG + Chr7:72492223-72492242 None:intergenic 35.0%
!! AATTGACTTGAAGTCCAACA+AGG + Chr7:72490402-72490421 None:intergenic 35.0%
!! CTTCCGACTTGACAAATTTT+GGG + Chr7:72490026-72490045 None:intergenic 35.0%
!! TGTGTTGTTGGTGTTAGAAT+TGG - Chr7:72489607-72489626 MsG0780040054.01.T01:CDS 35.0%
!! TTCATCCGGAATGTTTTTGT+TGG - Chr7:72491924-72491943 MsG0780040054.01.T01:intron 35.0%
AAAATGAAATGCGAGAGAGG+AGG + Chr7:72488283-72488302 None:intergenic 40.0%
AAAGAGACAAGGTTATCAGC+AGG + Chr7:72491129-72491148 None:intergenic 40.0%
AAATGAAATGCGAGAGAGGA+GGG + Chr7:72488282-72488301 None:intergenic 40.0%
AACTTAGGAAACCAGCGAAT+AGG - Chr7:72491587-72491606 MsG0780040054.01.T01:intron 40.0%
AAGCATCATATATTCCCCAC+TGG + Chr7:72491368-72491387 None:intergenic 40.0%
AAGTTGAAGGATCGCTTGAT+TGG - Chr7:72488876-72488895 MsG0780040054.01.T01:three_prime_UTR 40.0%
ACTGCAATATCCTTGTTGAC+TGG - Chr7:72490253-72490272 MsG0780040054.01.T01:intron 40.0%
ACTTAGGAAACCAGCGAATA+GGG - Chr7:72491588-72491607 MsG0780040054.01.T01:intron 40.0%
AGCAAAATGAAATGCGAGAG+AGG + Chr7:72488286-72488305 None:intergenic 40.0%
AGCATCATATATTCCCCACT+GGG + Chr7:72491367-72491386 None:intergenic 40.0%
AGGAAGCCAAAAGTTTGTCA+AGG - Chr7:72490523-72490542 MsG0780040054.01.T01:CDS 40.0%
ATCTTGCCAAAAGGTTCCTT+AGG + Chr7:72488519-72488538 None:intergenic 40.0%
ATTACTTGGTTACAGTGCAC+AGG - Chr7:72489789-72489808 MsG0780040054.01.T01:intron 40.0%
ATTCATGGACCAGAGCATAA+AGG - Chr7:72492211-72492230 MsG0780040054.01.T01:CDS 40.0%
CAAAGAATGAGTGCAGCAAA+GGG - Chr7:72491037-72491056 MsG0780040054.01.T01:intron 40.0%
CCAAAATTTGTCAAGTCGGA+AGG - Chr7:72490024-72490043 MsG0780040054.01.T01:intron 40.0%
CCAATCATAACAATACGGAG+AGG + Chr7:72491330-72491349 None:intergenic 40.0%
CCTCTCCGTATTGTTATGAT+TGG - Chr7:72491327-72491346 MsG0780040054.01.T01:intron 40.0%
CGTTGTTCAGAAAAGAGACA+AGG + Chr7:72491140-72491159 None:intergenic 40.0%
CTCAACAATGGTCTCAAAAG+AGG + Chr7:72490989-72491008 None:intergenic 40.0%
GAAGAACCGTAGAGAAATGA+AGG + Chr7:72488384-72488403 None:intergenic 40.0%
GCACTGTAACCAAGTAATGT+AGG + Chr7:72489787-72489806 None:intergenic 40.0%
GCTCCCAAAATTTGTCAAGT+CGG - Chr7:72490020-72490039 MsG0780040054.01.T01:intron 40.0%
GTTATTAATCGGATTTGGCG+TGG + Chr7:72492137-72492156 None:intergenic 40.0%
TACATCTCGATCTTGCCAAA+AGG + Chr7:72488528-72488547 None:intergenic 40.0%
TAGTTATGAAACACAGCCAC+CGG - Chr7:72489139-72489158 MsG0780040054.01.T01:three_prime_UTR 40.0%
TATGATTGCAGGCTGTACAA+GGG - Chr7:72490162-72490181 MsG0780040054.01.T01:intron 40.0%
TATTTATGGTCCCTATTCGC+TGG + Chr7:72491601-72491620 None:intergenic 40.0%
TCCAACAAGGTAGTGTAACA+TGG + Chr7:72490389-72490408 None:intergenic 40.0%
TCCTTTGCAATCTCTGCAAT+GGG + Chr7:72491524-72491543 None:intergenic 40.0%
TGATGAGATGCTCTTGTACT+TGG + Chr7:72489707-72489726 None:intergenic 40.0%
TGCACTCATTCTTTGGTTGT+GGG + Chr7:72491032-72491051 None:intergenic 40.0%
TGTATTTGGCTGCATACTCA+GGG + Chr7:72489873-72489892 None:intergenic 40.0%
TGTTGCTCTTGATCTATGCT+AGG - Chr7:72490111-72490130 MsG0780040054.01.T01:intron 40.0%
TTACTTGGTTACAGTGCACA+GGG - Chr7:72489790-72489809 MsG0780040054.01.T01:intron 40.0%
TTATCAGGTTTCAACCCCTT+AGG + Chr7:72490911-72490930 None:intergenic 40.0%
TTATGATTGCAGGCTGTACA+AGG - Chr7:72490161-72490180 MsG0780040054.01.T01:intron 40.0%
TTCCTTTGCAATCTCTGCAA+TGG + Chr7:72491525-72491544 None:intergenic 40.0%
TTGCTGAAAACTTCGTAGCT+AGG - Chr7:72491758-72491777 MsG0780040054.01.T01:intron 40.0%
TTGTATTTGGCTGCATACTC+AGG + Chr7:72489874-72489893 None:intergenic 40.0%
! CTTCTTCGTTTTCTTGGATC+TGG - Chr7:72488662-72488681 MsG0780040054.01.T01:intron 40.0%
! TCTTTTCTGAACAACGCCAA+AGG - Chr7:72491144-72491163 MsG0780040054.01.T01:intron 40.0%
! TTCAAAGTGTCCAGTCAACA+AGG + Chr7:72490266-72490285 None:intergenic 40.0%
!! AAATAAACAGAGGAGTGCTG+AGG - Chr7:72491616-72491635 MsG0780040054.01.T01:intron 40.0%
!! AAGTACAAGAGCATCTCATC+AGG - Chr7:72489706-72489725 MsG0780040054.01.T01:CDS 40.0%
!! AGTACAAGAGCATCTCATCA+GGG - Chr7:72489707-72489726 MsG0780040054.01.T01:CDS 40.0%
!! CCTTCCGACTTGACAAATTT+TGG + Chr7:72490027-72490046 None:intergenic 40.0%
!!! AGGGTTTGGAGTTTTGTTCA+AGG - Chr7:72489726-72489745 MsG0780040054.01.T01:CDS 40.0%
AAGACCTTGATCTACCTTGC+TGG - Chr7:72489892-72489911 MsG0780040054.01.T01:intron 45.0%
ACCAAGACCTCTTGCAAAAC+CGG + Chr7:72489995-72490014 None:intergenic 45.0%
AGATGCTCTTGTACTTGGCA+GGG + Chr7:72489702-72489721 None:intergenic 45.0%
ATCACCAACTGTTGCTCCTT+TGG + Chr7:72491163-72491182 None:intergenic 45.0%
ATTCACCAGATCGTCAGTTC+CGG - Chr7:72488423-72488442 MsG0780040054.01.T01:intron 45.0%
CATTGACACATCAACACCTG+TGG - Chr7:72489174-72489193 MsG0780040054.01.T01:CDS 45.0%
CCAAAAGGTTCCTTAGGAGA+AGG + Chr7:72488513-72488532 None:intergenic 45.0%
CCAAAGAATGAGTGCAGCAA+AGG - Chr7:72491036-72491055 MsG0780040054.01.T01:intron 45.0%
CCTTTGCTGCACTCATTCTT+TGG + Chr7:72491039-72491058 None:intergenic 45.0%
CTCATTCTTTGGTTGTGGGA+TGG + Chr7:72491028-72491047 None:intergenic 45.0%
CTGACGATCTGGTGAATAAC+CGG + Chr7:72488420-72488439 None:intergenic 45.0%
CTGCACTCATTCTTTGGTTG+TGG + Chr7:72491033-72491052 None:intergenic 45.0%
CTTGAGTTCTCAAGCATGGT+TGG - Chr7:72491642-72491661 MsG0780040054.01.T01:intron 45.0%
GAACGAATTCTCTCTCGCAA+TGG - Chr7:72488320-72488339 MsG0780040054.01.T01:three_prime_UTR 45.0%
GACCTTAGCAAAACATGGTG+TGG + Chr7:72492455-72492474 None:intergenic 45.0%
GATCTGGTGAATAACCGGTA+GGG + Chr7:72488415-72488434 None:intergenic 45.0%
GCCATGTTACACTACCTTGT+TGG - Chr7:72490385-72490404 MsG0780040054.01.T01:intron 45.0%
GGACTTTAACAGCCTCGAAT+GGG + Chr7:72489957-72489976 None:intergenic 45.0%
GTACAAGCAGCATAGAAAGC+AGG + Chr7:72488555-72488574 None:intergenic 45.0%
GTTACTTCCGTTACCATCTG+AGG - Chr7:72490301-72490320 MsG0780040054.01.T01:intron 45.0%
GTTGCTTGAGTTCTCAAGCA+TGG - Chr7:72491638-72491657 MsG0780040054.01.T01:intron 45.0%
TCCCATTGCAGAGATTGCAA+AGG - Chr7:72491520-72491539 MsG0780040054.01.T01:intron 45.0%
TGAACCAGCAAGGTAGATCA+AGG + Chr7:72489899-72489918 None:intergenic 45.0%
TGGAATGCCTCAGATGGTAA+CGG + Chr7:72490311-72490330 None:intergenic 45.0%
TGTAGTGGTTCACCAAGTGA+AGG - Chr7:72492165-72492184 MsG0780040054.01.T01:CDS 45.0%
TGTCTATGCATAAGCATGGG+TGG - Chr7:72491848-72491867 MsG0780040054.01.T01:intron 45.0%
TTCAAGGAGCAGGGAGTTAA+GGG - Chr7:72489742-72489761 MsG0780040054.01.T01:intron 45.0%
TTCTTCCACCAAAACCCTAC+CGG - Chr7:72488398-72488417 MsG0780040054.01.T01:intron 45.0%
TTTGCAAGAGGTCTTGGTGA+TGG - Chr7:72489997-72490016 MsG0780040054.01.T01:intron 45.0%
! AAGGGATTAGTGCCTCTATG+GGG - Chr7:72490180-72490199 MsG0780040054.01.T01:intron 45.0%
! ACAAGGGATTAGTGCCTCTA+TGG - Chr7:72490178-72490197 MsG0780040054.01.T01:intron 45.0%
! CAAGGGATTAGTGCCTCTAT+GGG - Chr7:72490179-72490198 MsG0780040054.01.T01:intron 45.0%
! CACAGGGTGCTTGCAAATTT+GGG - Chr7:72489806-72489825 MsG0780040054.01.T01:intron 45.0%
! CCTTCTCCTAAGGAACCTTT+TGG - Chr7:72488510-72488529 MsG0780040054.01.T01:intron 45.0%
! CGAAGTTTTCAGCAACTGGA+AGG + Chr7:72491753-72491772 None:intergenic 45.0%
! GCTACGAAGTTTTCAGCAAC+TGG + Chr7:72491757-72491776 None:intergenic 45.0%
! GTGAATAACCGGTAGGGTTT+TGG + Chr7:72488409-72488428 None:intergenic 45.0%
! TGCCACACCATGTTTTGCTA+AGG - Chr7:72492450-72492469 MsG0780040054.01.T01:five_prime_UTR 45.0%
! TTCTATGCTGCTTGTACTGC+TGG - Chr7:72488558-72488577 MsG0780040054.01.T01:intron 45.0%
! TTGCAAGAGGTCTTGGTGAT+GGG - Chr7:72489998-72490017 MsG0780040054.01.T01:intron 45.0%
! TTTGCTGGTGGATACATTGC+TGG - Chr7:72491078-72491097 MsG0780040054.01.T01:intron 45.0%
!! AAGAGCATCTCATCAGGGTT+TGG - Chr7:72489712-72489731 MsG0780040054.01.T01:CDS 45.0%
!! AATAACCGGTAGGGTTTTGG+TGG + Chr7:72488406-72488425 None:intergenic 45.0%
!!! CAACTTGGTGTCAGTTTTGC+TGG - Chr7:72491063-72491082 MsG0780040054.01.T01:intron 45.0%
!!! GGAGTTTTGTTCAAGGAGCA+GGG - Chr7:72489733-72489752 MsG0780040054.01.T01:CDS 45.0%
!!! TGGAGTTTTGTTCAAGGAGC+AGG - Chr7:72489732-72489751 MsG0780040054.01.T01:CDS 45.0%
!! AAAAAAAAAAATAACAAAAA+AGG + Chr7:72490716-72490735 None:intergenic 5.0%
!! AATATAACAAAAAATTTATT+AGG + Chr7:72491467-72491486 None:intergenic 5.0%
!! ATTAATATAAAATATAAAAG+GGG + Chr7:72492111-72492130 None:intergenic 5.0%
AACCGGGCTGAGTTTGAACA+CGG + Chr7:72489978-72489997 None:intergenic 50.0%
AACGCCAAAGGAGCAACAGT+TGG - Chr7:72491156-72491175 MsG0780040054.01.T01:intron 50.0%
ATATATTCCCCACTGGGCTC+CGG + Chr7:72491361-72491380 None:intergenic 50.0%
ATCTACCGGATCCAGTTCCA+CGG + Chr7:72488482-72488501 None:intergenic 50.0%
ATGCAGGCTGTTGCGAAGTT+TGG - Chr7:72491276-72491295 MsG0780040054.01.T01:intron 50.0%
CACTACACGCCTCTGTCAAA+AGG - Chr7:72491807-72491826 MsG0780040054.01.T01:intron 50.0%
CCAAGACCTCTTGCAAAACC+GGG + Chr7:72489994-72490013 None:intergenic 50.0%
CGATCTGGTGAATAACCGGT+AGG + Chr7:72488416-72488435 None:intergenic 50.0%
CGGACTTTAACAGCCTCGAA+TGG + Chr7:72489958-72489977 None:intergenic 50.0%
GAGATGCTCTTGTACTTGGC+AGG + Chr7:72489703-72489722 None:intergenic 50.0%
GATTAGTGCCTCTATGGGGA+AGG - Chr7:72490184-72490203 MsG0780040054.01.T01:intron 50.0%
GCAAACTGGAATGCCTCAGA+TGG + Chr7:72490317-72490336 None:intergenic 50.0%
GCTGGTGGAATTCTTAGCTG+TGG - Chr7:72488576-72488595 MsG0780040054.01.T01:intron 50.0%
GGATGGGTCCCTACATTACT+TGG - Chr7:72489775-72489794 MsG0780040054.01.T01:intron 50.0%
GTCAAGTCGGAAGGAGCTTT+GGG - Chr7:72490033-72490052 MsG0780040054.01.T01:intron 50.0%
GTTCAAGGAGCAGGGAGTTA+AGG - Chr7:72489741-72489760 MsG0780040054.01.T01:intron 50.0%
TCAAGTCGGAAGGAGCTTTG+GGG - Chr7:72490034-72490053 MsG0780040054.01.T01:intron 50.0%
TGTCAAGTCGGAAGGAGCTT+TGG - Chr7:72490032-72490051 MsG0780040054.01.T01:intron 50.0%
TTTGTTAGGCCAACAACCGG+TGG - Chr7:72491485-72491504 MsG0780040054.01.T01:intron 50.0%
! GCACAGGGTGCTTGCAAATT+TGG - Chr7:72489805-72489824 MsG0780040054.01.T01:intron 50.0%
! TATGCTGCTTGTACTGCTGG+TGG - Chr7:72488561-72488580 MsG0780040054.01.T01:intron 50.0%
!! GGAGTTAAGGGCTTTTTCCG+CGG - Chr7:72489754-72489773 MsG0780040054.01.T01:intron 50.0%
!! GTTGCGAAGTTTGGTGTGGT+TGG - Chr7:72491285-72491304 MsG0780040054.01.T01:intron 50.0%
!! TAAGGGCTTTTTCCGCGGAT+GGG - Chr7:72489759-72489778 MsG0780040054.01.T01:intron 50.0%
!! TTAAGGGCTTTTTCCGCGGA+TGG - Chr7:72489758-72489777 MsG0780040054.01.T01:intron 50.0%
!!! CTTGGTGTCAGTTTTGCTGG+TGG - Chr7:72491066-72491085 MsG0780040054.01.T01:intron 50.0%
AACACTTACCGGAGCCCAGT+GGG - Chr7:72491350-72491369 MsG0780040054.01.T01:intron 55.0%
AATACGGAGAGGGAGACCTC+TGG + Chr7:72491319-72491338 None:intergenic 55.0%
CAGCAGATGCTGAACCAGCA+AGG + Chr7:72489909-72489928 None:intergenic 55.0%
CGTTGCACTTTGCCCATTCG+AGG - Chr7:72489942-72489961 MsG0780040054.01.T01:intron 55.0%
GATCCAGTTCCACGGAGTGA+AGG + Chr7:72488474-72488493 None:intergenic 55.0%
GCAATCTCTGCAATGGGAGC+AGG + Chr7:72491518-72491537 None:intergenic 55.0%
GGAATCTGCCTTCCCCATAG+AGG + Chr7:72490195-72490214 None:intergenic 55.0%
GTAATGTAGGGACCCATCCG+CGG + Chr7:72489774-72489793 None:intergenic 55.0%
GTCAATGACCGTGTCGTGAC+CGG + Chr7:72489161-72489180 None:intergenic 55.0%
GTCCGTGTTCAAACTCAGCC+CGG - Chr7:72489973-72489992 MsG0780040054.01.T01:intron 55.0%
TCACTCCGTGGAACTGGATC+CGG - Chr7:72488474-72488493 MsG0780040054.01.T01:intron 55.0%
TGCAGCAAAGGGCTGCAACT+TGG - Chr7:72491048-72491067 MsG0780040054.01.T01:intron 55.0%
! ACTCAGCCCGGTTTTGCAAG+AGG - Chr7:72489985-72490004 MsG0780040054.01.T01:intron 55.0%
! CCCGGTTTTGCAAGAGGTCT+TGG - Chr7:72489991-72490010 MsG0780040054.01.T01:intron 55.0%
! GGCTGTTGCGAAGTTTGGTG+TGG - Chr7:72491281-72491300 MsG0780040054.01.T01:intron 55.0%
!! GTGGTTGGTCTCTTCACCAG+AGG - Chr7:72491300-72491319 MsG0780040054.01.T01:intron 55.0%
!! TGCTGGTTCAGCATCTGCTG+AGG - Chr7:72489909-72489928 MsG0780040054.01.T01:intron 55.0%
AATGACCGTGTCGTGACCGG+TGG + Chr7:72489158-72489177 None:intergenic 60.0%
ACACTTACCGGAGCCCAGTG+GGG - Chr7:72491351-72491370 MsG0780040054.01.T01:intron 60.0%
CCAGTTCCACGGAGTGAAGG+CGG + Chr7:72488471-72488490 None:intergenic 60.0%
GAACACTTACCGGAGCCCAG+TGG - Chr7:72491349-72491368 MsG0780040054.01.T01:intron 60.0%
CACAGCCACCGGTCACGACA+CGG - Chr7:72489150-72489169 MsG0780040054.01.T01:three_prime_UTR 65.0%
CCGCCTTCACTCCGTGGAAC+TGG - Chr7:72488468-72488487 MsG0780040054.01.T01:intron 65.0%
CGGGACCGGAACTGACGATC+TGG + Chr7:72488431-72488450 None:intergenic 65.0%
! GGAGCAGCACCACCGGTTGT+TGG + Chr7:72491497-72491516 None:intergenic 65.0%
GGGAGCAGGAGCAGCACCAC+CGG + Chr7:72491504-72491523 None:intergenic 70.0%
TCCACGGAGTGAAGGCGGCG+CGG + Chr7:72488466-72488485 None:intergenic 70.0%
ACGGAGTGAAGGCGGCGCGG+CGG + Chr7:72488463-72488482 None:intergenic 75.0%
! GAGTGAAGGCGGCGCGGCGG+CGG + Chr7:72488460-72488479 None:intergenic 80.0%
! GCCGCGCCGCCTTCACTCCG+TGG - Chr7:72488462-72488481 MsG0780040054.01.T01:intron 80.0%
! GGCGGCGGAAGGAGCGGGAC+CGG + Chr7:72488445-72488464 None:intergenic 80.0%
! CGGCGCGGCGGCGGAAGGAG+CGG + Chr7:72488451-72488470 None:intergenic 85.0%
! GAAGGCGGCGCGGCGGCGGA+AGG + Chr7:72488456-72488475 None:intergenic 85.0%
! GGCGCGGCGGCGGAAGGAGC+GGG + Chr7:72488450-72488469 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr7 gene 72488196 72492524 72488196 ID=MsG0780040054.01;Name=MsG0780040054.01
Chr7 mRNA 72488196 72492524 72488196 ID=MsG0780040054.01.T01;Parent=MsG0780040054.01;Name=MsG0780040054.01.T01;_AED=0.47;_eAED=0.47;_QI=143|1|1|1|0.83|0.71|7|513|370
Chr7 exon 72488196 72488359 72488196 ID=MsG0780040054.01.T01:exon:9852;Parent=MsG0780040054.01.T01
Chr7 exon 72488824 72489227 72488824 ID=MsG0780040054.01.T01:exon:9851;Parent=MsG0780040054.01.T01
Chr7 five_prime_UTR 72492382 72492524 72492382 ID=MsG0780040054.01.T01:five_prime_utr;Parent=MsG0780040054.01.T01
Chr7 CDS 72492070 72492381 72492070 ID=MsG0780040054.01.T01:cds;Parent=MsG0780040054.01.T01
Chr7 CDS 72490665 72491026 72490665 ID=MsG0780040054.01.T01:cds;Parent=MsG0780040054.01.T01
Chr7 CDS 72490504 72490547 72490504 ID=MsG0780040054.01.T01:cds;Parent=MsG0780040054.01.T01
Chr7 CDS 72489538 72489752 72489538 ID=MsG0780040054.01.T01:cds;Parent=MsG0780040054.01.T01
Chr7 CDS 72489314 72489438 72489314 ID=MsG0780040054.01.T01:cds;Parent=MsG0780040054.01.T01
Chr7 CDS 72489173 72489227 72489173 ID=MsG0780040054.01.T01:cds;Parent=MsG0780040054.01.T01
Chr7 three_prime_UTR 72488824 72489172 72488824 ID=MsG0780040054.01.T01:three_prime_utr;Parent=MsG0780040054.01.T01
Chr7 three_prime_UTR 72488196 72488359 72488196 ID=MsG0780040054.01.T01:three_prime_utr;Parent=MsG0780040054.01.T01
Chr7 mRNA 72488775 72492524 72488775 ID=MsG0780040054.01.T02;Parent=MsG0780040054.01;Name=MsG0780040054.01.T02;_AED=0.48;_eAED=0.48;_QI=143|1|1|1|1|1|6|398|370
Chr7 exon 72488775 72489227 72488775 ID=MsG0780040054.01.T02:exon:9853;Parent=MsG0780040054.01.T02
Chr7 five_prime_UTR 72492382 72492524 72492382 ID=MsG0780040054.01.T02:five_prime_utr;Parent=MsG0780040054.01.T02
Chr7 CDS 72492070 72492381 72492070 ID=MsG0780040054.01.T02:cds;Parent=MsG0780040054.01.T02
Chr7 CDS 72490665 72491026 72490665 ID=MsG0780040054.01.T02:cds;Parent=MsG0780040054.01.T02
Chr7 CDS 72490504 72490547 72490504 ID=MsG0780040054.01.T02:cds;Parent=MsG0780040054.01.T02
Chr7 CDS 72489538 72489752 72489538 ID=MsG0780040054.01.T02:cds;Parent=MsG0780040054.01.T02
Chr7 CDS 72489314 72489438 72489314 ID=MsG0780040054.01.T02:cds;Parent=MsG0780040054.01.T02
Chr7 CDS 72489173 72489227 72489173 ID=MsG0780040054.01.T02:cds;Parent=MsG0780040054.01.T02
Chr7 three_prime_UTR 72488775 72489172 72488775 ID=MsG0780040054.01.T02:three_prime_utr;Parent=MsG0780040054.01.T02
Gene Sequence

>MsG0780040054.01.T01

ATGGCAGAATCATCTTCTTCTTCTAACCGTAGAAACATGATTCCTTCATTTCTCTACGGTTCTTCCACCAAAACCCTACCGGTTATTCACCAGATCGTCAGTTCCGGTCCCGCTCCTTCCGCCGCCGCGCCGCCTTCACTCCGTGGAACTGGATCCGGTAGATTCATGATTCCTTCTCCTAAGGAACCTTTTGGCAAGATCGAGATGTATTCTCCTGCTTTCTATGCTGCTTGTACTGCTGGTGGAATTCTTAGCTGTGGTCTTACTCATATGACTGTTACTCCTCTTGACTTAGTCAAGTGTAATATGCAGATTGACCCTGCCAAGTACAAGAGCATCTCATCAGGGTTTGGAGTTTTGTTCAAGGAGCAGGGAGTTAAGGGCTTTTTCCGCGGATGGGTCCCTACATTACTTGGTTACAGTGCACAGGGTGCTTGCAAATTTGGGTTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCTGAGTATGCAGCCAAATACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCTGACGTTGCACTTTGCCCATTCGAGGCTGTTAAAGTCCGTGTTCAAACTCAGCCCGGTTTTGCAAGAGGTCTTGGTGATGGGCTCCCAAAATTTGTCAAGTCGGAAGGAGCTTTGGGGCTGTACAAGGGATTAGTGCCTCTATGGGGAAGGCAGATTCCATACACTATGATGAAATTTGCCTCTTTTGAGACCATTGTTGAGCAAATCTATAAGCATGCCATCCCACAACCAAAGAATGAGTGCAGCAAAGGGCTGCAACTTGGTGTCAGTTTTGCTGGTGGATACATTGCTGGTGTACTTTGTGCAATTGTGTCTCATCCTGCTGATAACCTTGTCTCTTTTCTGAACAACGCCAAAGGAGCAACAGTTGGTGATGCTGTTGCGAAGTTTGGTGTGGTTGGTCTCTTCACCAGAGGTCTCCCTCTCCGTATTGTTATGATTGGAACACTTACCGGAGCCCAGTGGGGAATATATGATGCTTTCAAAGTCTTTGTGGGGCTGCCAACAACCGGTGGTGCTGCTCCTGCTCCCATTGCAGAGATTGCAAAGGAATGA

>MsG0780040054.01.T02

ATGGCAGAATCATCTTCTTCTTCTAACCGTAGAAACATGATTCCTTCATTTCTCTACGGTTCTTCCACCAAAACCCTACCGGTTATTCACCAGATCGTCAGTTCCGGTCCCGCTCCTTCCGCCGCCGCGCCGCCTTCACTCCGTGGAACTGGATCCGGTAGATTCATGATTCCTTCTCCTAAGGAACCTTTTGGCAAGATCGAGATGTATTCTCCTGCTTTCTATGCTGCTTGTACTGCTGGTGGAATTCTTAGCTGTGGTCTTACTCATATGACTGTTACTCCTCTTGACTTAGTCAAGTGTAATATGCAGATTGACCCTGCCAAGTACAAGAGCATCTCATCAGGGTTTGGAGTTTTGTTCAAGGAGCAGGGAGTTAAGGGCTTTTTCCGCGGATGGGTCCCTACATTACTTGGTTACAGTGCACAGGGTGCTTGCAAATTTGGGTTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCTGAGTATGCAGCCAAATACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCTGACGTTGCACTTTGCCCATTCGAGGCTGTTAAAGTCCGTGTTCAAACTCAGCCCGGTTTTGCAAGAGGTCTTGGTGATGGGCTCCCAAAATTTGTCAAGTCGGAAGGAGCTTTGGGGCTGTACAAGGGATTAGTGCCTCTATGGGGAAGGCAGATTCCATACACTATGATGAAATTTGCCTCTTTTGAGACCATTGTTGAGCAAATCTATAAGCATGCCATCCCACAACCAAAGAATGAGTGCAGCAAAGGGCTGCAACTTGGTGTCAGTTTTGCTGGTGGATACATTGCTGGTGTACTTTGTGCAATTGTGTCTCATCCTGCTGATAACCTTGTCTCTTTTCTGAACAACGCCAAAGGAGCAACAGTTGGTGATGCTGTTGCGAAGTTTGGTGTGGTTGGTCTCTTCACCAGAGGTCTCCCTCTCCGTATTGTTATGATTGGAACACTTACCGGAGCCCAGTGGGGAATATATGATGCTTTCAAAGTCTTTGTGGGGCTGCCAACAACCGGTGGTGCTGCTCCTGCTCCCATTGCAGAGATTGCAAAGGAATGA
Protein sequence

>MsG0780040054.01.T01

MAESSSSSNRRNMIPSFLYGSSTKTLPVIHQIVSSGPAPSAAAPPSLRGTGSGRFMIPSPKEPFGKIEMYSPAFYAACTAGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLFKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEQIYKHAIPQPKNECSKGLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVAKFGVVGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPAPIAEIAKE*

>MsG0780040054.01.T02

MAESSSSSNRRNMIPSFLYGSSTKTLPVIHQIVSSGPAPSAAAPPSLRGTGSGRFMIPSPKEPFGKIEMYSPAFYAACTAGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLFKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEQIYKHAIPQPKNECSKGLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVAKFGVVGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPAPIAEIAKE*