AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022224.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022224.01.T01 MTR_4g083150 69.526 443 26 7 1 334 1 443 0.0 536
MsG0480022224.01.T01 MTR_7g013840 34.916 358 164 12 9 301 11 364 2.48e-45 162
MsG0480022224.01.T01 MTR_7g013840 34.819 359 164 12 9 301 11 365 3.58e-45 162
MsG0480022224.01.T01 MTR_4g109640 34.605 367 166 11 1 302 1 358 2.39e-43 154
MsG0480022224.01.T01 MTR_4g109640 34.605 367 166 11 1 302 1 358 3.59e-43 154
MsG0480022224.01.T01 MTR_4g109640 34.605 367 166 11 1 302 1 358 1.03e-42 155
MsG0480022224.01.T01 MTR_7g057520 30.357 448 204 15 1 345 1 443 6.50e-39 145
MsG0480022224.01.T01 MTR_7g055610 30.357 448 204 15 1 345 8 450 7.94e-39 145
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022224.01.T01 AT1G13730 32.632 380 186 13 15 338 15 380 3.18e-41 150
MsG0480022224.01.T01 AT1G13730 32.632 380 186 13 15 338 15 380 3.18e-41 150
MsG0480022224.01.T01 AT3G25150 30.750 400 189 14 3 322 9 400 9.18e-40 147
MsG0480022224.01.T01 AT3G25150 30.693 404 192 14 3 326 108 503 1.97e-39 148
MsG0480022224.01.T01 AT2G03640 30.123 405 175 15 13 328 13 398 6.26e-37 139
MsG0480022224.01.T01 AT2G03640 29.557 406 175 16 13 328 13 397 6.17e-36 136
MsG0480022224.01.T01 AT2G03640 29.557 406 175 16 13 328 13 397 6.17e-36 136
MsG0480022224.01.T01 AT2G03640 29.557 406 175 16 13 328 13 397 6.17e-36 136
MsG0480022224.01.T01 AT2G03640 30.973 339 164 12 13 302 13 330 1.75e-35 135
MsG0480022224.01.T01 AT1G69250 30.294 340 180 10 10 302 8 337 1.28e-32 127
MsG0480022224.01.T01 AT5G60980 31.057 454 201 14 1 360 1 436 1.07e-29 119
MsG0480022224.01.T01 AT5G60980 31.057 454 201 14 1 360 1 436 1.07e-29 119
MsG0480022224.01.T01 AT5G60980 30.989 455 201 14 1 360 1 437 1.11e-29 119
MsG0480022224.01.T01 AT5G60980 30.989 455 201 14 1 360 1 437 1.11e-29 119
MsG0480022224.01.T01 AT1G69250 28.923 325 178 9 9 290 7 321 5.96e-25 105

Find 124 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCGGGCTTTCAAGAAATT+TGG 0.137993 4:+69866440 MsG0480022224.01.T01:CDS
TTGAATACCATCACGTTTAA+TGG 0.154706 4:-69866465 None:intergenic
CATTGCTTCGCCCGGCATTC+TGG 0.193073 4:-69867327 None:intergenic
TTACAACAGGGGTCTTGTTT+TGG 0.272474 4:+69866584 MsG0480022224.01.T01:intron
ATACAGTAGGTAAACAAAAT+TGG 0.277251 4:-69867614 None:intergenic
TTGTTAGGGGCTGGTACTTC+AGG 0.280465 4:-69866212 None:intergenic
ACTTTCTAGTATGATTGATT+TGG 0.283145 4:+69867640 MsG0480022224.01.T01:three_prime_UTR
CCAGGCTCGGGTGTAATAAT+AGG 0.285575 4:-69865408 None:intergenic
CTCTCAAGTACACAAGCTTT+AGG 0.286875 4:+69865146 MsG0480022224.01.T01:CDS
GACTCTTTAACATGATTAAC+AGG 0.298753 4:-69865920 None:intergenic
TCCAATGGAATGTCATTGTT+AGG 0.306814 4:-69866227 None:intergenic
GGCAACTTTGGTGGCGGTCG+TGG 0.314322 4:+69867239 MsG0480022224.01.T01:CDS
GAAATAAGAAGAGATAAGTA+TGG 0.322544 4:-69867582 None:intergenic
AGTTATCATTTCTGTCATTT+CGG 0.333938 4:-69867205 None:intergenic
TCAATGCTTGTGGGTTGTTC+CGG 0.336415 4:-69865962 None:intergenic
GCAACTTTGGTGGCGGTCGT+GGG 0.345091 4:+69867240 MsG0480022224.01.T01:CDS
ATCGGGCTTTCAAGAAATTT+GGG 0.355731 4:+69866441 MsG0480022224.01.T01:CDS
GTTGGGGTTTGAACTGCTTC+AGG 0.368212 4:-69864100 None:intergenic
TCTCAAGTACACAAGCTTTA+GGG 0.368515 4:+69865147 MsG0480022224.01.T01:CDS
CTTTCATCAGCATCATTTGC+TGG 0.371219 4:-69865372 None:intergenic
TGAATACCATCACGTTTAAT+GGG 0.380463 4:-69866464 None:intergenic
CAACAAGAATGGTATATAAC+TGG 0.380768 4:-69867669 None:intergenic
TGAGTGGGTGGAATGACTTC+AGG 0.384425 4:-69865764 None:intergenic
TAGTATGATTGATTTGGAAT+TGG 0.388274 4:+69867646 MsG0480022224.01.T01:three_prime_UTR
GCTCAGCCTTCATATAATAA+TGG 0.390830 4:+69865190 MsG0480022224.01.T01:CDS
GTCATGGTACCATCTTCTTC+AGG 0.399954 4:-69864229 None:intergenic
TGCCAACCATCTGAGAGGTT+GGG 0.401347 4:-69864117 None:intergenic
GATCTCTCCATCGCTTCAAC+AGG 0.402451 4:+69863262 MsG0480022224.01.T01:five_prime_UTR
CTTAGTAGATAGCGGCATCT+AGG 0.403558 4:+69867468 MsG0480022224.01.T01:three_prime_UTR
CCAATGGAATGTCATTGTTA+GGG 0.408231 4:-69866226 None:intergenic
ATGACAGAAATGATAACTTC+AGG 0.408555 4:+69867210 MsG0480022224.01.T01:CDS
AGGGGCCGTGGCAACTTTGG+TGG 0.417674 4:+69867230 MsG0480022224.01.T01:CDS
CTTGGTAATTGAGTGGCAAC+GGG 0.422554 4:+69867440 MsG0480022224.01.T01:three_prime_UTR
CTCGAGGAGGCCAGAATGCC+GGG 0.424749 4:+69867317 MsG0480022224.01.T01:CDS
TGCTCTACTGTTGCACTCAT+AGG 0.427103 4:-69866413 None:intergenic
TTCAGGGGCCGTGGCAACTT+TGG 0.431524 4:+69867227 MsG0480022224.01.T01:CDS
AGCATCTCCATTGCTTCGCC+CGG 0.432821 4:-69867335 None:intergenic
TAAAACCTATGAACCTGATC+CGG 0.440830 4:-69864181 None:intergenic
AACTTTGGTGGCGGTCGTGG+GGG 0.442248 4:+69867242 MsG0480022224.01.T01:CDS
ATAACTTTCTTCAACAAGAA+TGG 0.444769 4:-69867680 None:intergenic
CTCAATTCTGCACCGCGACC+CGG 0.446115 4:+69864162 MsG0480022224.01.T01:CDS
GAGAGGCGAGGTGAGTTCTC+TGG 0.449630 4:+69867289 MsG0480022224.01.T01:CDS
ATGAGTGAGGTTGAGAGAGT+TGG 0.450217 4:-69863202 None:intergenic
GAGTGCAACAGTAGAGCAAT+TGG 0.452380 4:+69866418 MsG0480022224.01.T01:CDS
ATGACTTCAGGAACATGAAC+AGG 0.457541 4:-69865752 None:intergenic
TCTGCACCGCGACCCGGATC+AGG 0.457710 4:+69864168 MsG0480022224.01.T01:CDS
GCCAACCATCTGAGAGGTTG+GGG 0.457802 4:-69864116 None:intergenic
GCACTTTATTGAACTTTCAC+TGG 0.460254 4:-69867409 None:intergenic
AGCAACTTTCTCAATGCTTG+TGG 0.460755 4:-69865972 None:intergenic
GCGACCCGGATCAGGTTCAT+AGG 0.461475 4:+69864176 MsG0480022224.01.T01:CDS
CAACTTTGGTGGCGGTCGTG+GGG 0.470500 4:+69867241 MsG0480022224.01.T01:CDS
AAGTCATCATGTTAAGGAAC+CGG 0.473889 4:+69865943 MsG0480022224.01.T01:CDS
CCTCGAGGAGGCCAGAATGC+CGG 0.476604 4:+69867316 MsG0480022224.01.T01:CDS
GTGAGCTTGCCACTGGAGAA+TGG 0.479307 4:+69865869 MsG0480022224.01.T01:CDS
GCAACTTTCTCAATGCTTGT+GGG 0.481813 4:-69865971 None:intergenic
TGACAGAAATGATAACTTCA+GGG 0.488146 4:+69867211 MsG0480022224.01.T01:CDS
CCTCCATTCTGATAACTCCT+TGG 0.489553 4:-69867361 None:intergenic
TTGCCAACCATCTGAGAGGT+TGG 0.492618 4:-69864118 None:intergenic
GTCATGTGATTTACCAGGCT+CGG 0.502005 4:-69865421 None:intergenic
TTAGTAGATAGCGGCATCTA+GGG 0.502425 4:+69867469 MsG0480022224.01.T01:three_prime_UTR
AGAGTCAAGTCATCATGTTA+AGG 0.503478 4:+69865937 MsG0480022224.01.T01:CDS
CAAAGAAGTGAGCTTGCCAC+TGG 0.508017 4:+69865862 MsG0480022224.01.T01:CDS
ATCACTCCATTATTATATGA+AGG 0.512169 4:-69865196 None:intergenic
AACAGTAGAGCAATTGGATC+GGG 0.513751 4:+69866424 MsG0480022224.01.T01:CDS
TCATGTGATTTACCAGGCTC+GGG 0.514945 4:-69865420 None:intergenic
AATGATAACTTCAGGGGCCG+TGG 0.521415 4:+69867218 MsG0480022224.01.T01:CDS
GTACACAAGCTTTAGGGTGG+AGG 0.522382 4:+69865153 MsG0480022224.01.T01:CDS
AAAACCTATGAACCTGATCC+GGG 0.522821 4:-69864180 None:intergenic
CAGAATGCCGGGCGAAGCAA+TGG 0.525228 4:+69867328 MsG0480022224.01.T01:CDS
TCTTGGTAATTGAGTGGCAA+CGG 0.527675 4:+69867439 MsG0480022224.01.T01:three_prime_UTR
GGAATGTCATTGTTAGGGGC+TGG 0.529179 4:-69866221 None:intergenic
GGTGTAATAATAGGTTCTGA+TGG 0.542317 4:-69865399 None:intergenic
GGCCGTGGCAACTTTGGTGG+CGG 0.544889 4:+69867233 MsG0480022224.01.T01:CDS
CAATGGAATGTCATTGTTAG+GGG 0.545943 4:-69866225 None:intergenic
CCTATTATTACACCCGAGCC+TGG 0.553187 4:+69865408 MsG0480022224.01.T01:CDS
TGAGTGAGGTTGAGAGAGTT+GGG 0.554593 4:-69863201 None:intergenic
TTCATATAATAATGGAGTGA+TGG 0.556967 4:+69865198 MsG0480022224.01.T01:CDS
TTTGGGCCCATTAAACGTGA+TGG 0.557773 4:+69866458 MsG0480022224.01.T01:CDS
ATCATTTGCTGGCACAGACT+CGG 0.560650 4:-69865361 None:intergenic
GCAATAACAGTTTGAGTGGG+TGG 0.564301 4:-69865818 None:intergenic
AGTACCTCCTGTTGAAGCGA+TGG 0.565621 4:-69863269 None:intergenic
CTTTATTGAACTTTCACTGG+TGG 0.566362 4:-69867406 None:intergenic
GACCGCCACCAAAGTTGCCA+CGG 0.568090 4:-69867235 None:intergenic
ATCAGCAATAACAGTTTGAG+TGG 0.569394 4:-69865822 None:intergenic
ACCCCAACCTCTCAGATGGT+TGG 0.570317 4:+69864115 MsG0480022224.01.T01:CDS
TATGAACCTGATCCGGGTCG+CGG 0.578182 4:-69864174 None:intergenic
GAAAGTTGCTTCAAATACAC+AGG 0.581410 4:+69865985 MsG0480022224.01.T01:CDS
CTCTCCATCGCTTCAACAGG+AGG 0.584909 4:+69863265 MsG0480022224.01.T01:five_prime_UTR
CCCTAACAATGACATTCCAT+TGG 0.588915 4:+69866226 MsG0480022224.01.T01:CDS
GGAACAACAGTTTGAGTGGG+TGG 0.592094 4:-69865776 None:intergenic
AGGAGTTATCAGAATGGAGG+AGG 0.592308 4:+69867364 MsG0480022224.01.T01:CDS
TTCTCTGGCCGACCTCGAGG+AGG 0.599211 4:+69867304 MsG0480022224.01.T01:CDS
ATGAGTCGACCTGAAGAAGA+TGG 0.603043 4:+69864220 MsG0480022224.01.T01:CDS
GGAATAACAGTTTGAGCGGG+TGG 0.603043 4:-69865797 None:intergenic
TCAAACCCCAACCTCTCAGA+TGG 0.604241 4:+69864111 MsG0480022224.01.T01:CDS
CAACAGTAGAGCAATTGGAT+CGG 0.605783 4:+69866423 MsG0480022224.01.T01:CDS
GGGTGGAACAACAGTTTGAG+TGG 0.606283 4:-69865780 None:intergenic
CATTCTGGCCTCCTCGAGGT+CGG 0.611513 4:-69867312 None:intergenic
AACGGAAGGAACGATTTGAG+AGG 0.613863 4:+69867272 MsG0480022224.01.T01:CDS
TGATATTCCTCAGGGCGTAG+TGG 0.616601 4:+69867179 MsG0480022224.01.T01:intron
GAGTTCTCTGGCCGACCTCG+AGG 0.618854 4:+69867301 MsG0480022224.01.T01:CDS
GGTGGAATAACAGTTTGAGC+GGG 0.620085 4:-69865800 None:intergenic
GCAATGGAGATGCTGTGCCA+AGG 0.625535 4:+69867344 MsG0480022224.01.T01:CDS
AGTGGTGGTGACAGTTGTCA+TGG 0.632992 4:-69864245 None:intergenic
TATTCAAGTTAGAAGTAACA+AGG 0.636666 4:+69866481 MsG0480022224.01.T01:CDS
GGGTGGAATAACAGTTTGAG+CGG 0.639063 4:-69865801 None:intergenic
GAAAAGAATAATGAGAACGC+AGG 0.639827 4:+69866248 MsG0480022224.01.T01:CDS
GTGCCAAGGAGTTATCAGAA+TGG 0.640821 4:+69867358 MsG0480022224.01.T01:CDS
CAAGTACACAAGCTTTAGGG+TGG 0.641102 4:+69865150 MsG0480022224.01.T01:CDS
CCAAGGAGTTATCAGAATGG+AGG 0.642210 4:+69867361 MsG0480022224.01.T01:CDS
GACTCATGACACTTGAGTCG+TGG 0.645542 4:-69864204 None:intergenic
GGTGGAACAACAGTTTGAGT+GGG 0.654456 4:-69865779 None:intergenic
ACTAGAAAGTTAGATACAGT+AGG 0.656599 4:-69867627 None:intergenic
AAAGATCACAGAAACTACAA+AGG 0.657053 4:-69867523 None:intergenic
AAGGAACGATTTGAGAGGCG+AGG 0.663896 4:+69867277 MsG0480022224.01.T01:CDS
TCAGCAATAACAGTTTGAGT+GGG 0.664497 4:-69865821 None:intergenic
CCGGCATTCTGGCCTCCTCG+AGG 0.665155 4:-69867316 None:intergenic
GACAGAAATGATAACTTCAG+GGG 0.670872 4:+69867212 MsG0480022224.01.T01:CDS
AGTTGCTTCAAATACACAGG+AGG 0.675895 4:+69865988 MsG0480022224.01.T01:CDS
GATGGAGAGATCAAAGAGAG+AGG 0.677005 4:-69863251 None:intergenic
TTGTCATGTTGTAGAGATGG+CGG 0.678132 4:+69864075 MsG0480022224.01.T01:intron
AAAGAGAGAAACAAAGAATG+CGG 0.683376 4:-69863228 None:intergenic
AAGAATGCGGCTGATGAGTG+AGG 0.705213 4:-69863215 None:intergenic
AGCATTGCCAACCATCTGAG+AGG 0.707622 4:-69864122 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAAACAATAAAGAT+TGG - Chr4:69863436-69863455 None:intergenic 10.0%
!! ATTTCTTTATTAAATCATTA+AGG + Chr4:69866776-69866795 MsG0480022224.01.T01:intron 10.0%
!! GATAAAATAAATAGTTTAAT+TGG - Chr4:69863934-69863953 None:intergenic 10.0%
!!! ATGATAAATTTCAATATTTT+TGG - Chr4:69864902-69864921 None:intergenic 10.0%
!!! TGATAAATTTCAATATTTTT+GGG - Chr4:69864901-69864920 None:intergenic 10.0%
!! AAAAAAAAATTCATTAAACC+TGG - Chr4:69863661-69863680 None:intergenic 15.0%
!! AAAAAAAATTCATTAAACCT+GGG - Chr4:69863660-69863679 None:intergenic 15.0%
!! AAAAACGAAATCAAATTAAA+TGG - Chr4:69865656-69865675 None:intergenic 15.0%
!! AATAATATAAGAGAATGTTA+TGG + Chr4:69864613-69864632 MsG0480022224.01.T01:intron 15.0%
!!! ATTTTTATGTGTTTAAATGT+GGG + Chr4:69865694-69865713 MsG0480022224.01.T01:intron 15.0%
!!! GAATTTTTTTAGTATATTTC+AGG + Chr4:69866855-69866874 MsG0480022224.01.T01:intron 15.0%
!!! GTATAAAGTCTTATTTTAAA+AGG + Chr4:69866322-69866341 MsG0480022224.01.T01:intron 15.0%
!!! TATTTTTATGTGTTTAAATG+TGG + Chr4:69865693-69865712 MsG0480022224.01.T01:intron 15.0%
!!! TTTTTTACTTATTACTCTTA+AGG + Chr4:69866279-69866298 MsG0480022224.01.T01:intron 15.0%
!! AACAATATACAAGTATAGAA+TGG - Chr4:69867134-69867153 None:intergenic 20.0%
!! AACATTCAAAAACTAAAAAC+CGG - Chr4:69863488-69863507 None:intergenic 20.0%
!! ATTCGATTATGAAATTAACT+TGG + Chr4:69863621-69863640 MsG0480022224.01.T01:intron 20.0%
!! CAAATTTAACAAGAGAAATA+TGG - Chr4:69866943-69866962 None:intergenic 20.0%
!! CATAAAAATATTCCTATAAG+AGG - Chr4:69865683-69865702 None:intergenic 20.0%
!! TAAATAAGTAAAACTCACAA+TGG - Chr4:69866037-69866056 None:intergenic 20.0%
!!! AAATTCAAGACATTTGTTTT+AGG + Chr4:69863769-69863788 MsG0480022224.01.T01:intron 20.0%
!!! AACTTTGTATTTGAGATTTA+GGG + Chr4:69863377-69863396 MsG0480022224.01.T01:intron 20.0%
!!! ATACATGACATTTGTTTTAT+CGG + Chr4:69863514-69863533 MsG0480022224.01.T01:intron 20.0%
!!! TAAACTATTTATTTTATCGG+TGG + Chr4:69863936-69863955 MsG0480022224.01.T01:intron 20.0%
!!! TAACTTTGTATTTGAGATTT+AGG + Chr4:69863376-69863395 MsG0480022224.01.T01:intron 20.0%
!!! TGATTTTCAATGGTTATTTA+GGG + Chr4:69863344-69863363 MsG0480022224.01.T01:intron 20.0%
!!! TGTTTTAATTGTTAAAGTTC+CGG + Chr4:69863466-69863485 MsG0480022224.01.T01:intron 20.0%
!!! TTAATTTGAGAAAGTTTTTG+TGG + Chr4:69865451-69865470 MsG0480022224.01.T01:intron 20.0%
!!! TTGGGTTTTTAAATCTTTAT+GGG + Chr4:69866706-69866725 MsG0480022224.01.T01:intron 20.0%
!!! TTTATTCTTGTGATTTTCAA+TGG + Chr4:69863334-69863353 MsG0480022224.01.T01:intron 20.0%
!!! TTTTGATTTTGAAAGTAACT+TGG + Chr4:69864030-69864049 MsG0480022224.01.T01:intron 20.0%
! AAATCAAAAACACACAAACA+CGG - Chr4:69864019-69864038 None:intergenic 25.0%
! ACTGCTTGGATTTAAAAAAT+AGG - Chr4:69864495-69864514 None:intergenic 25.0%
! ATACAGTAGGTAAACAAAAT+TGG - Chr4:69867617-69867636 None:intergenic 25.0%
! ATCACTCCATTATTATATGA+AGG - Chr4:69865199-69865218 None:intergenic 25.0%
! ATTTAGCAGTAAATAGCATA+AGG - Chr4:69865625-69865644 None:intergenic 25.0%
! CACTAGTTAAACTATATATG+CGG + Chr4:69864296-69864315 MsG0480022224.01.T01:intron 25.0%
! GAAATAAGAAGAGATAAGTA+TGG - Chr4:69867585-69867604 None:intergenic 25.0%
! TAAACTAAGCTCATAAGTAT+AGG - Chr4:69864699-69864718 None:intergenic 25.0%
! TCAATAACGTATTATCATCT+TGG + Chr4:69864842-69864861 MsG0480022224.01.T01:intron 25.0%
! TGAGACATGAAAATAAAGTA+CGG - Chr4:69864351-69864370 None:intergenic 25.0%
! TTAGGTTAGGTCATATAAAT+TGG + Chr4:69863744-69863763 MsG0480022224.01.T01:intron 25.0%
!! ACTTTCTAGTATGATTGATT+TGG + Chr4:69867640-69867659 MsG0480022224.01.T01:three_prime_UTR 25.0%
!! AGTTATCATTTCTGTCATTT+CGG - Chr4:69867208-69867227 None:intergenic 25.0%
!! ATGTAAAATTTTCACTCTGT+TGG + Chr4:69863902-69863921 MsG0480022224.01.T01:intron 25.0%
!! ATGTTTGGTTGAGTTTATTT+TGG + Chr4:69864998-69865017 MsG0480022224.01.T01:intron 25.0%
!! GTGATTTTCAATGGTTATTT+AGG + Chr4:69863343-69863362 MsG0480022224.01.T01:intron 25.0%
!! GTTGGGTTTTTAAATCTTTA+TGG + Chr4:69866705-69866724 MsG0480022224.01.T01:intron 25.0%
!! TATTCAAGTTAGAAGTAACA+AGG + Chr4:69866481-69866500 MsG0480022224.01.T01:CDS 25.0%
!! TATTTTCAATCCCCTTTTTA+CGG + Chr4:69864966-69864985 MsG0480022224.01.T01:intron 25.0%
!! TTCATATAATAATGGAGTGA+TGG + Chr4:69865198-69865217 MsG0480022224.01.T01:CDS 25.0%
!! TTCTCATTATTCTTTTCCAA+TGG - Chr4:69866245-69866264 None:intergenic 25.0%
!! TTTGAATGTTTTGTGTTACA+TGG + Chr4:69863721-69863740 MsG0480022224.01.T01:intron 25.0%
!!! AATAAAGTGCTTCTTTTTCT+TGG + Chr4:69867422-69867441 MsG0480022224.01.T01:three_prime_UTR 25.0%
!!! ACAATATTTTTGCTACACTT+TGG + Chr4:69864754-69864773 MsG0480022224.01.T01:intron 25.0%
!!! ACATTTGTTTTAGGATTTGA+AGG + Chr4:69863778-69863797 MsG0480022224.01.T01:intron 25.0%
!!! GATTGCAGAAAAGTTATTTT+TGG - Chr4:69866087-69866106 None:intergenic 25.0%
!!! TAGTATGATTGATTTGGAAT+TGG + Chr4:69867646-69867665 MsG0480022224.01.T01:three_prime_UTR 25.0%
!!! TTTATTTTGGTGCACTAATT+CGG + Chr4:69865011-69865030 MsG0480022224.01.T01:intron 25.0%
AAAGAGAGAAACAAAGAATG+CGG - Chr4:69863231-69863250 None:intergenic 30.0%
AAAGATCACAGAAACTACAA+AGG - Chr4:69867526-69867545 None:intergenic 30.0%
AATCAAAAACACACAAACAC+GGG - Chr4:69864018-69864037 None:intergenic 30.0%
ACTAGAAAGTTAGATACAGT+AGG - Chr4:69867630-69867649 None:intergenic 30.0%
ACTGCAGTAAGTTCAAAAAA+TGG + Chr4:69864265-69864284 MsG0480022224.01.T01:intron 30.0%
AGTTACGCAATTTACTACTT+TGG - Chr4:69864388-69864407 None:intergenic 30.0%
ATAGAAATACTCATACCTCT+AGG - Chr4:69866648-69866667 None:intergenic 30.0%
ATATACAAGTATAGAATGGC+AGG - Chr4:69867130-69867149 None:intergenic 30.0%
ATCAATAGTTGTTATCAGCA+AGG + Chr4:69866666-69866685 MsG0480022224.01.T01:intron 30.0%
ATGAACTTGAACCGTAAAAA+GGG - Chr4:69864980-69864999 None:intergenic 30.0%
ATGACAGAAATGATAACTTC+AGG + Chr4:69867210-69867229 MsG0480022224.01.T01:CDS 30.0%
ATTCATATGAAGCAAGCAAA+AGG - Chr4:69866839-69866858 None:intergenic 30.0%
CAACAAGAATGGTATATAAC+TGG - Chr4:69867672-69867691 None:intergenic 30.0%
GACAAAAATTCAGTCATCAT+TGG - Chr4:69863975-69863994 None:intergenic 30.0%
GACTCTTTAACATGATTAAC+AGG - Chr4:69865923-69865942 None:intergenic 30.0%
TAACGTATTATCATCTTGGT+TGG + Chr4:69864846-69864865 MsG0480022224.01.T01:intron 30.0%
TAGCAAAATCTGCAGATTAA+AGG - Chr4:69866968-69866987 None:intergenic 30.0%
TGAATACCATCACGTTTAAT+GGG - Chr4:69866467-69866486 None:intergenic 30.0%
TGACAGAAATGATAACTTCA+GGG + Chr4:69867211-69867230 MsG0480022224.01.T01:CDS 30.0%
TGATGTGTAGTTAGTAAACT+AGG - Chr4:69866533-69866552 None:intergenic 30.0%
TGTTTGTCGTGTATTATTTG+AGG + Chr4:69863564-69863583 MsG0480022224.01.T01:intron 30.0%
TTGAATACCATCACGTTTAA+TGG - Chr4:69866468-69866487 None:intergenic 30.0%
! AGTGGATTTAGATTGAATGT+CGG - Chr4:69863835-69863854 None:intergenic 30.0%
! ATGTTTTGTGTTACATGGTT+AGG + Chr4:69863726-69863745 MsG0480022224.01.T01:intron 30.0%
! CCTTCTTTCAAACTTTTCAA+GGG + Chr4:69866742-69866761 MsG0480022224.01.T01:intron 30.0%
! CTATGATCTTTATTTGATGC+AGG + Chr4:69865102-69865121 MsG0480022224.01.T01:intron 30.0%
! TCCTTCTTTCAAACTTTTCA+AGG + Chr4:69866741-69866760 MsG0480022224.01.T01:intron 30.0%
! TTTTCTGCAATCATTGTTCA+AGG + Chr4:69866095-69866114 MsG0480022224.01.T01:intron 30.0%
!! AAAGTATTGTGATCTCTCAT+TGG + Chr4:69863873-69863892 MsG0480022224.01.T01:intron 30.0%
!! ATGCTTGTTTCTTTTACAAC+AGG + Chr4:69866571-69866590 MsG0480022224.01.T01:intron 30.0%
!! TCTTTTTCTTGGTAATTGAG+TGG + Chr4:69867433-69867452 MsG0480022224.01.T01:three_prime_UTR 30.0%
!! TGCTTGTTTCTTTTACAACA+GGG + Chr4:69866572-69866591 MsG0480022224.01.T01:intron 30.0%
!!! AATGGATGCAAAGACTTTTT+TGG - Chr4:69866019-69866038 None:intergenic 30.0%
!!! AGGGATTTTGATTTGCATTT+TGG + Chr4:69867488-69867507 MsG0480022224.01.T01:three_prime_UTR 30.0%
!!! ATTTTTTGAACTTACTGCAG+TGG - Chr4:69864266-69864285 None:intergenic 30.0%
!!! CAATATTTTTGGGCTTTCAT+GGG - Chr4:69864891-69864910 None:intergenic 30.0%
!!! GTTGTTTTGATGCAATATCA+TGG - Chr4:69864736-69864755 None:intergenic 30.0%
!!! TCAATATTTTTGGGCTTTCA+TGG - Chr4:69864892-69864911 None:intergenic 30.0%
!!! TCGTTTTTTGTTCCTCTTAT+AGG + Chr4:69865668-69865687 MsG0480022224.01.T01:intron 30.0%
!!! TTATTTTGGTGCACTAATTC+GGG + Chr4:69865012-69865031 MsG0480022224.01.T01:intron 30.0%
AAGTCATCATGTTAAGGAAC+CGG + Chr4:69865943-69865962 MsG0480022224.01.T01:CDS 35.0%
AATACGTTATAGATTTGCCC+AGG - Chr4:69864802-69864821 None:intergenic 35.0%
AGAGTCAAGTCATCATGTTA+AGG + Chr4:69865937-69865956 MsG0480022224.01.T01:CDS 35.0%
ATCAAAAACACACAAACACG+GGG - Chr4:69864017-69864036 None:intergenic 35.0%
ATCAGCAATAACAGTTTGAG+TGG - Chr4:69865825-69865844 None:intergenic 35.0%
ATCGGGCTTTCAAGAAATTT+GGG + Chr4:69866441-69866460 MsG0480022224.01.T01:CDS 35.0%
CAATGGAATGTCATTGTTAG+GGG - Chr4:69866228-69866247 None:intergenic 35.0%
CATGAACTTGAACCGTAAAA+AGG - Chr4:69864981-69865000 None:intergenic 35.0%
CCAATGGAATGTCATTGTTA+GGG - Chr4:69866229-69866248 None:intergenic 35.0%
CCCTTGAAAAGTTTGAAAGA+AGG - Chr4:69866745-69866764 None:intergenic 35.0%
CTTTATTGAACTTTCACTGG+TGG - Chr4:69867409-69867428 None:intergenic 35.0%
GAAAAGAATAATGAGAACGC+AGG + Chr4:69866248-69866267 MsG0480022224.01.T01:CDS 35.0%
GAAAGTTGCTTCAAATACAC+AGG + Chr4:69865985-69866004 MsG0480022224.01.T01:CDS 35.0%
GACAGAAATGATAACTTCAG+GGG + Chr4:69867212-69867231 MsG0480022224.01.T01:CDS 35.0%
GACGACTCATTACTAAATAG+TGG - Chr4:69863853-69863872 None:intergenic 35.0%
GCACTTTATTGAACTTTCAC+TGG - Chr4:69867412-69867431 None:intergenic 35.0%
GCTCAGCCTTCATATAATAA+TGG + Chr4:69865190-69865209 MsG0480022224.01.T01:CDS 35.0%
GTAGACTTTCCATTGAAGAA+AGG + Chr4:69866904-69866923 MsG0480022224.01.T01:intron 35.0%
GTAGTTAGTAAACTAGGTGT+TGG - Chr4:69866527-69866546 None:intergenic 35.0%
TAAAACCTATGAACCTGATC+CGG - Chr4:69864184-69864203 None:intergenic 35.0%
TAAGCACCATAATCAGCATT+AGG + Chr4:69864460-69864479 MsG0480022224.01.T01:intron 35.0%
TAGATGTCATGTGATTTACC+AGG - Chr4:69865429-69865448 None:intergenic 35.0%
TAGGATTTGAAGGATTTGCA+AGG + Chr4:69863788-69863807 MsG0480022224.01.T01:intron 35.0%
TCAGCAATAACAGTTTGAGT+GGG - Chr4:69865824-69865843 None:intergenic 35.0%
TCCAATGGAATGTCATTGTT+AGG - Chr4:69866230-69866249 None:intergenic 35.0%
TCTCAAGTACACAAGCTTTA+GGG + Chr4:69865147-69865166 MsG0480022224.01.T01:CDS 35.0%
TGAACTTGAACCGTAAAAAG+GGG - Chr4:69864979-69864998 None:intergenic 35.0%
TGTTTGTCATGTTGTAGAGA+TGG + Chr4:69864072-69864091 MsG0480022224.01.T01:intron 35.0%
TTGTGTTACATGGTTAGGTT+AGG + Chr4:69863731-69863750 MsG0480022224.01.T01:intron 35.0%
! GATAATTTTCCATTCTCCAG+TGG - Chr4:69865881-69865900 None:intergenic 35.0%
! GCTGTAAATTGAAGTTGGTT+GGG + Chr4:69866688-69866707 MsG0480022224.01.T01:intron 35.0%
! GGGATTTTCTTAGTAGATAG+CGG + Chr4:69867460-69867479 MsG0480022224.01.T01:three_prime_UTR 35.0%
! GGTGTAATAATAGGTTCTGA+TGG - Chr4:69865402-69865421 None:intergenic 35.0%
! TATATGCGGAAGCATATAAG+TGG + Chr4:69864310-69864329 MsG0480022224.01.T01:intron 35.0%
! TTACGGTTCAAGTTCATGTT+TGG + Chr4:69864983-69865002 MsG0480022224.01.T01:intron 35.0%
!! GCTTGTTTCTTTTACAACAG+GGG + Chr4:69866573-69866592 MsG0480022224.01.T01:intron 35.0%
!! TTATCGGTGGATTGTATTGA+TGG + Chr4:69863949-69863968 MsG0480022224.01.T01:intron 35.0%
!!! CATGACATTTGTTTTATCGG+TGG + Chr4:69863517-69863536 MsG0480022224.01.T01:intron 35.0%
AAAACCTATGAACCTGATCC+GGG - Chr4:69864183-69864202 None:intergenic 40.0%
AACAGTAGAGCAATTGGATC+GGG + Chr4:69866424-69866443 MsG0480022224.01.T01:CDS 40.0%
AAGTGATGAGAGTTGAGTAG+GGG + Chr4:69864636-69864655 MsG0480022224.01.T01:intron 40.0%
AGCAACTTTCTCAATGCTTG+TGG - Chr4:69865975-69865994 None:intergenic 40.0%
AGTTGCTTCAAATACACAGG+AGG + Chr4:69865988-69866007 MsG0480022224.01.T01:CDS 40.0%
ATAGGGTGTGATATTCCTCA+GGG + Chr4:69867171-69867190 MsG0480022224.01.T01:intron 40.0%
ATGACTTCAGGAACATGAAC+AGG - Chr4:69865755-69865774 None:intergenic 40.0%
CAACAGTAGAGCAATTGGAT+CGG + Chr4:69866423-69866442 MsG0480022224.01.T01:CDS 40.0%
CACACAGAGAAAAACAGCAA+AGG - Chr4:69864560-69864579 None:intergenic 40.0%
CCCTAACAATGACATTCCAT+TGG + Chr4:69866226-69866245 MsG0480022224.01.T01:CDS 40.0%
CTACGATTGTCCAACATAAC+AGG - Chr4:69866888-69866907 None:intergenic 40.0%
CTCTCAAGTACACAAGCTTT+AGG + Chr4:69865146-69865165 MsG0480022224.01.T01:CDS 40.0%
CTTTCATCAGCATCATTTGC+TGG - Chr4:69865375-69865394 None:intergenic 40.0%
CTTTCCATTGAAGAAAGGAG+AGG + Chr4:69866909-69866928 MsG0480022224.01.T01:intron 40.0%
GAAGTGATGAGAGTTGAGTA+GGG + Chr4:69864635-69864654 MsG0480022224.01.T01:intron 40.0%
GACTGTGAGCATAAGCATTA+TGG + Chr4:69864667-69864686 MsG0480022224.01.T01:intron 40.0%
GATATCTTCGACTTACTGCT+TGG - Chr4:69864509-69864528 None:intergenic 40.0%
GATCGGGCTTTCAAGAAATT+TGG + Chr4:69866440-69866459 MsG0480022224.01.T01:CDS 40.0%
GCAAAGGACAAAGTGCAAAT+TGG - Chr4:69864544-69864563 None:intergenic 40.0%
GCAACTTTCTCAATGCTTGT+GGG - Chr4:69865974-69865993 None:intergenic 40.0%
GCAAGGCTGTAAATTGAAGT+TGG + Chr4:69866683-69866702 MsG0480022224.01.T01:intron 40.0%
GCTCTGTAGATTCAAGCATA+AGG - Chr4:69865587-69865606 None:intergenic 40.0%
GGGAGCAGAATTATCTTTCA+AGG - Chr4:69866127-69866146 None:intergenic 40.0%
TGATGCAATATCATGGCACA+AGG - Chr4:69864729-69864748 None:intergenic 40.0%
TTGTCATGTTGTAGAGATGG+CGG + Chr4:69864075-69864094 MsG0480022224.01.T01:intron 40.0%
! CGTCATCCTAATGCTGATTA+TGG - Chr4:69864469-69864488 None:intergenic 40.0%
! GGCTGTAAATTGAAGTTGGT+TGG + Chr4:69866687-69866706 MsG0480022224.01.T01:intron 40.0%
! TCTTGGTAATTGAGTGGCAA+CGG + Chr4:69867439-69867458 MsG0480022224.01.T01:three_prime_UTR 40.0%
! TTAGTAGATAGCGGCATCTA+GGG + Chr4:69867469-69867488 MsG0480022224.01.T01:three_prime_UTR 40.0%
! TTGGTGTTTGTGAATTACCC+AGG + Chr4:69863640-69863659 MsG0480022224.01.T01:intron 40.0%
! TTTTGAACTTACTGCAGTGG+TGG - Chr4:69864263-69864282 None:intergenic 40.0%
!! AAACCTTAACACTGGTTCCT+GGG + Chr4:69864782-69864801 MsG0480022224.01.T01:intron 40.0%
!! AAGGCATCGTAAATTCTCAC+AGG - Chr4:69866820-69866839 None:intergenic 40.0%
!! TGTTTTATCGGTGGATTCGA+GGG + Chr4:69863526-69863545 MsG0480022224.01.T01:intron 40.0%
!! TTCTTTAACTTGCCTTCCTC+AGG + Chr4:69866359-69866378 MsG0480022224.01.T01:intron 40.0%
!! TTGTTTTATCGGTGGATTCG+AGG + Chr4:69863525-69863544 MsG0480022224.01.T01:intron 40.0%
!!! GTTTGCGCAGTCATTTTTTC+TGG + Chr4:69865267-69865286 MsG0480022224.01.T01:intron 40.0%
!!! TTACAACAGGGGTCTTGTTT+TGG + Chr4:69866584-69866603 MsG0480022224.01.T01:intron 40.0%
AACGGAAGGAACGATTTGAG+AGG + Chr4:69867272-69867291 MsG0480022224.01.T01:CDS 45.0%
ACATAGAATCCCTTGTCCTG+TGG - Chr4:69865295-69865314 None:intergenic 45.0%
AGGACAAAGTGCAAATTGGC+AGG - Chr4:69864540-69864559 None:intergenic 45.0%
AGGAGTTATCAGAATGGAGG+AGG + Chr4:69867364-69867383 MsG0480022224.01.T01:CDS 45.0%
AGTGATGAGAGTTGAGTAGG+GGG + Chr4:69864637-69864656 MsG0480022224.01.T01:intron 45.0%
ATGAGTCGACCTGAAGAAGA+TGG + Chr4:69864220-69864239 MsG0480022224.01.T01:CDS 45.0%
ATGAGTGAGGTTGAGAGAGT+TGG - Chr4:69863205-69863224 None:intergenic 45.0%
ATTCTGCTCCCTTCCATTTG+AGG + Chr4:69866136-69866155 MsG0480022224.01.T01:intron 45.0%
CCAAGGAGTTATCAGAATGG+AGG + Chr4:69867361-69867380 MsG0480022224.01.T01:CDS 45.0%
CCTCCATTCTGATAACTCCT+TGG - Chr4:69867364-69867383 None:intergenic 45.0%
CGTGAAAGACAAAGCAGTAC+TGG - Chr4:69866998-69867017 None:intergenic 45.0%
CTCTCTCTCGAGATTGACTA+TGG + Chr4:69865044-69865063 MsG0480022224.01.T01:intron 45.0%
CTTGCCTCTCCTTTCTTCAA+TGG - Chr4:69866916-69866935 None:intergenic 45.0%
GAGTGCAACAGTAGAGCAAT+TGG + Chr4:69866418-69866437 MsG0480022224.01.T01:CDS 45.0%
GATAGGGTGTGATATTCCTC+AGG + Chr4:69867170-69867189 MsG0480022224.01.T01:intron 45.0%
GATGGAGAGATCAAAGAGAG+AGG - Chr4:69863254-69863273 None:intergenic 45.0%
GCAATAACAGTTTGAGTGGG+TGG - Chr4:69865821-69865840 None:intergenic 45.0%
GCAATATCATGGCACAAGGT+TGG - Chr4:69864725-69864744 None:intergenic 45.0%
GGAACCAGTGTTAAGGTTTG+AGG - Chr4:69864781-69864800 None:intergenic 45.0%
GGAAGTGATGAGAGTTGAGT+AGG + Chr4:69864634-69864653 MsG0480022224.01.T01:intron 45.0%
GGGTGGAATAACAGTTTGAG+CGG - Chr4:69865804-69865823 None:intergenic 45.0%
GGTGGAACAACAGTTTGAGT+GGG - Chr4:69865782-69865801 None:intergenic 45.0%
GGTGGAATAACAGTTTGAGC+GGG - Chr4:69865803-69865822 None:intergenic 45.0%
GTCATGGTACCATCTTCTTC+AGG - Chr4:69864232-69864251 None:intergenic 45.0%
GTCATGTGATTTACCAGGCT+CGG - Chr4:69865424-69865443 None:intergenic 45.0%
GTGCCAAGGAGTTATCAGAA+TGG + Chr4:69867358-69867377 MsG0480022224.01.T01:CDS 45.0%
TCATGTGATTTACCAGGCTC+GGG - Chr4:69865423-69865442 None:intergenic 45.0%
TGAGTGAGGTTGAGAGAGTT+GGG - Chr4:69863204-69863223 None:intergenic 45.0%
TGCTCTACTGTTGCACTCAT+AGG - Chr4:69866416-69866435 None:intergenic 45.0%
TGGTCCTCAAACCTTAACAC+TGG + Chr4:69864774-69864793 MsG0480022224.01.T01:intron 45.0%
TGTCCAACATAACAGGAGAG+AGG - Chr4:69866881-69866900 None:intergenic 45.0%
TTCTGCTCCCTTCCATTTGA+GGG + Chr4:69866137-69866156 MsG0480022224.01.T01:intron 45.0%
TTTGGGCCCATTAAACGTGA+TGG + Chr4:69866458-69866477 MsG0480022224.01.T01:CDS 45.0%
! ATCATTTGCTGGCACAGACT+CGG - Chr4:69865364-69865383 None:intergenic 45.0%
! CTTAGTAGATAGCGGCATCT+AGG + Chr4:69867468-69867487 MsG0480022224.01.T01:three_prime_UTR 45.0%
! CTTCAATGCAAAGTGCCTAG+AGG + Chr4:69866630-69866649 MsG0480022224.01.T01:intron 45.0%
! CTTGGTAATTGAGTGGCAAC+GGG + Chr4:69867440-69867459 MsG0480022224.01.T01:three_prime_UTR 45.0%
! CTTTTCTGCGTCAGAGTTCT+TGG + Chr4:69867542-69867561 MsG0480022224.01.T01:three_prime_UTR 45.0%
! GATGGTTGGCAATGCTTTTG+TGG + Chr4:69864129-69864148 MsG0480022224.01.T01:CDS 45.0%
! TAACTTGCCTTCCTCAGGTA+GGG + Chr4:69866364-69866383 MsG0480022224.01.T01:intron 45.0%
! TCAATGCTTGTGGGTTGTTC+CGG - Chr4:69865965-69865984 None:intergenic 45.0%
!! CAAACCTTAACACTGGTTCC+TGG + Chr4:69864781-69864800 MsG0480022224.01.T01:intron 45.0%
!! CAAGTACACAAGCTTTAGGG+TGG + Chr4:69865150-69865169 MsG0480022224.01.T01:CDS 45.0%
!! TTAACTTGCCTTCCTCAGGT+AGG + Chr4:69866363-69866382 MsG0480022224.01.T01:intron 45.0%
!!! GGGGTCTTGTTTTGGTTTTG+TGG + Chr4:69866592-69866611 MsG0480022224.01.T01:intron 45.0%
!!! GTCATTTTTTCTGGCTCCAC+AGG + Chr4:69865276-69865295 MsG0480022224.01.T01:intron 45.0%
!! AACTTATATTTATTATTTAT+AGG + Chr4:69865538-69865557 MsG0480022224.01.T01:intron 5.0%
!!! AATTAAACTATTTATTTTAT+CGG + Chr4:69863933-69863952 MsG0480022224.01.T01:intron 5.0%
AAGAATGCGGCTGATGAGTG+AGG - Chr4:69863218-69863237 None:intergenic 50.0%
AAGGAACGATTTGAGAGGCG+AGG + Chr4:69867277-69867296 MsG0480022224.01.T01:CDS 50.0%
AATGATAACTTCAGGGGCCG+TGG + Chr4:69867218-69867237 MsG0480022224.01.T01:CDS 50.0%
AGCATTGCCAACCATCTGAG+AGG - Chr4:69864125-69864144 None:intergenic 50.0%
AGGAGAAGCCCTCAAATGGA+AGG - Chr4:69866148-69866167 None:intergenic 50.0%
AGGCCTCTCTCCTGTTATGT+TGG + Chr4:69866875-69866894 MsG0480022224.01.T01:intron 50.0%
AGTACCTCCTGTTGAAGCGA+TGG - Chr4:69863272-69863291 None:intergenic 50.0%
CAAAGAAGTGAGCTTGCCAC+TGG + Chr4:69865862-69865881 MsG0480022224.01.T01:CDS 50.0%
CCAGGCTCGGGTGTAATAAT+AGG - Chr4:69865411-69865430 None:intergenic 50.0%
CCTATTATTACACCCGAGCC+TGG + Chr4:69865408-69865427 MsG0480022224.01.T01:CDS 50.0%
GACTCATGACACTTGAGTCG+TGG - Chr4:69864207-69864226 None:intergenic 50.0%
GATCTCTCCATCGCTTCAAC+AGG + Chr4:69863262-69863281 MsG0480022224.01.T01:five_prime_UTR 50.0%
GGAACAACAGTTTGAGTGGG+TGG - Chr4:69865779-69865798 None:intergenic 50.0%
GGAATAACAGTTTGAGCGGG+TGG - Chr4:69865800-69865819 None:intergenic 50.0%
GGAATGTCATTGTTAGGGGC+TGG - Chr4:69866224-69866243 None:intergenic 50.0%
GGAGAAGCCCTCAAATGGAA+GGG - Chr4:69866147-69866166 None:intergenic 50.0%
GGAGTGATGGTTGTAGTGAC+TGG + Chr4:69865211-69865230 MsG0480022224.01.T01:intron 50.0%
GGGTGGAACAACAGTTTGAG+TGG - Chr4:69865783-69865802 None:intergenic 50.0%
GTTGGGGTTTGAACTGCTTC+AGG - Chr4:69864103-69864122 None:intergenic 50.0%
TAGCAGGAGAAGCCCTCAAA+TGG - Chr4:69866152-69866171 None:intergenic 50.0%
TATTGCATGAGCCCTACCTG+AGG - Chr4:69866378-69866397 None:intergenic 50.0%
TCAAACCCCAACCTCTCAGA+TGG + Chr4:69864111-69864130 MsG0480022224.01.T01:CDS 50.0%
TGAGTGGGTGGAATGACTTC+AGG - Chr4:69865767-69865786 None:intergenic 50.0%
TGATATTCCTCAGGGCGTAG+TGG + Chr4:69867179-69867198 MsG0480022224.01.T01:intron 50.0%
TGCCAACCATCTGAGAGGTT+GGG - Chr4:69864120-69864139 None:intergenic 50.0%
TTGCCAACCATCTGAGAGGT+TGG - Chr4:69864121-69864140 None:intergenic 50.0%
TTGCCCAGGAACCAGTGTTA+AGG - Chr4:69864788-69864807 None:intergenic 50.0%
! AGTGGTGGTGACAGTTGTCA+TGG - Chr4:69864248-69864267 None:intergenic 50.0%
! TTGTTAGGGGCTGGTACTTC+AGG - Chr4:69866215-69866234 None:intergenic 50.0%
!! GTACACAAGCTTTAGGGTGG+AGG + Chr4:69865153-69865172 MsG0480022224.01.T01:CDS 50.0%
!! TTTCTGGCTCCACAGGACAA+GGG + Chr4:69865283-69865302 MsG0480022224.01.T01:intron 50.0%
!!! TTTTCTGGCTCCACAGGACA+AGG + Chr4:69865282-69865301 MsG0480022224.01.T01:intron 50.0%
ACCCCAACCTCTCAGATGGT+TGG + Chr4:69864115-69864134 MsG0480022224.01.T01:CDS 55.0%
AGCAGCCACGCTATGTACAC+GGG - Chr4:69866192-69866211 None:intergenic 55.0%
AGCATCTCCATTGCTTCGCC+CGG - Chr4:69867338-69867357 None:intergenic 55.0%
CTCTCCATCGCTTCAACAGG+AGG + Chr4:69863265-69863284 MsG0480022224.01.T01:five_prime_UTR 55.0%
GAGCAGCCACGCTATGTACA+CGG - Chr4:69866193-69866212 None:intergenic 55.0%
GCAATGGAGATGCTGTGCCA+AGG + Chr4:69867344-69867363 MsG0480022224.01.T01:CDS 55.0%
GCCAACCATCTGAGAGGTTG+GGG - Chr4:69864119-69864138 None:intergenic 55.0%
GTGAGCTTGCCACTGGAGAA+TGG + Chr4:69865869-69865888 MsG0480022224.01.T01:CDS 55.0%
TATGAACCTGATCCGGGTCG+CGG - Chr4:69864177-69864196 None:intergenic 55.0%
! GTAGTGACTGGCTGCTTGAC+TGG + Chr4:69865223-69865242 MsG0480022224.01.T01:intron 55.0%
ACCCACCCGTGTACATAGCG+TGG + Chr4:69866184-69866203 MsG0480022224.01.T01:intron 60.0%
AGCCACGCTATGTACACGGG+TGG - Chr4:69866189-69866208 None:intergenic 60.0%
CAGAATGCCGGGCGAAGCAA+TGG + Chr4:69867328-69867347 MsG0480022224.01.T01:CDS 60.0%
CATTCTGGCCTCCTCGAGGT+CGG - Chr4:69867315-69867334 None:intergenic 60.0%
CATTGCTTCGCCCGGCATTC+TGG - Chr4:69867330-69867349 None:intergenic 60.0%
CTCAATTCTGCACCGCGACC+CGG + Chr4:69864162-69864181 MsG0480022224.01.T01:CDS 60.0%
GACCGCCACCAAAGTTGCCA+CGG - Chr4:69867238-69867257 None:intergenic 60.0%
GAGAGGCGAGGTGAGTTCTC+TGG + Chr4:69867289-69867308 MsG0480022224.01.T01:CDS 60.0%
GCATGAGCCCTACCTGAGGA+AGG - Chr4:69866374-69866393 None:intergenic 60.0%
GCCACGCTATGTACACGGGT+GGG - Chr4:69866188-69866207 None:intergenic 60.0%
GCGACCCGGATCAGGTTCAT+AGG + Chr4:69864176-69864195 MsG0480022224.01.T01:CDS 60.0%
TCGGTATCCACTACGCCCTG+AGG - Chr4:69867189-69867208 None:intergenic 60.0%
TTCAGGGGCCGTGGCAACTT+TGG + Chr4:69867227-69867246 MsG0480022224.01.T01:CDS 60.0%
! GGGTGCACAGCTGGTTTAGC+AGG - Chr4:69866168-69866187 None:intergenic 60.0%
!! AACTTTGGTGGCGGTCGTGG+GGG + Chr4:69867242-69867261 MsG0480022224.01.T01:CDS 60.0%
!! CAACTTTGGTGGCGGTCGTG+GGG + Chr4:69867241-69867260 MsG0480022224.01.T01:CDS 60.0%
!! GCAACTTTGGTGGCGGTCGT+GGG + Chr4:69867240-69867259 MsG0480022224.01.T01:CDS 60.0%
!! GGTCGTGGGGGTGGCTTTAA+CGG + Chr4:69867254-69867273 MsG0480022224.01.T01:CDS 60.0%
!! GTGGGGGTGGCTTTAACGGA+AGG + Chr4:69867258-69867277 MsG0480022224.01.T01:CDS 60.0%
AGGGGCCGTGGCAACTTTGG+TGG + Chr4:69867230-69867249 MsG0480022224.01.T01:CDS 65.0%
CCTCGAGGAGGCCAGAATGC+CGG + Chr4:69867316-69867335 MsG0480022224.01.T01:CDS 65.0%
CTCGAGGAGGCCAGAATGCC+GGG + Chr4:69867317-69867336 MsG0480022224.01.T01:CDS 65.0%
GAGTTCTCTGGCCGACCTCG+AGG + Chr4:69867301-69867320 MsG0480022224.01.T01:CDS 65.0%
GGCCGTGGCAACTTTGGTGG+CGG + Chr4:69867233-69867252 MsG0480022224.01.T01:CDS 65.0%
TACACGGGTGGGTGCACAGC+TGG - Chr4:69866177-69866196 None:intergenic 65.0%
TTCTCTGGCCGACCTCGAGG+AGG + Chr4:69867304-69867323 MsG0480022224.01.T01:CDS 65.0%
!! GGCAACTTTGGTGGCGGTCG+TGG + Chr4:69867239-69867258 MsG0480022224.01.T01:CDS 65.0%
CCGGCATTCTGGCCTCCTCG+AGG - Chr4:69867319-69867338 None:intergenic 70.0%
TCTGCACCGCGACCCGGATC+AGG + Chr4:69864168-69864187 MsG0480022224.01.T01:CDS 70.0%
!! TTTGGTGGCGGTCGTGGGGG+TGG + Chr4:69867245-69867264 MsG0480022224.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 69863167 69867698 69863167 ID=MsG0480022224.01;Name=MsG0480022224.01
Chr4 mRNA 69863167 69867698 69863167 ID=MsG0480022224.01.T01;Parent=MsG0480022224.01;Name=MsG0480022224.01.T01;_AED=0.31;_eAED=0.31;_QI=122|0.62|0.55|1|0.87|0.77|9|283|376
Chr4 exon 69863167 69863286 69863167 ID=MsG0480022224.01.T01:exon:59603;Parent=MsG0480022224.01.T01
Chr4 exon 69864089 69864270 69864089 ID=MsG0480022224.01.T01:exon:59604;Parent=MsG0480022224.01.T01
Chr4 exon 69865124 69865225 69865124 ID=MsG0480022224.01.T01:exon:59605;Parent=MsG0480022224.01.T01
Chr4 exon 69865333 69865429 69865333 ID=MsG0480022224.01.T01:exon:59606;Parent=MsG0480022224.01.T01
Chr4 exon 69865750 69866038 69865750 ID=MsG0480022224.01.T01:exon:59607;Parent=MsG0480022224.01.T01
Chr4 exon 69866202 69866269 69866202 ID=MsG0480022224.01.T01:exon:59608;Parent=MsG0480022224.01.T01
Chr4 exon 69866381 69866502 69866381 ID=MsG0480022224.01.T01:exon:59609;Parent=MsG0480022224.01.T01
Chr4 exon 69866593 69866641 69866593 ID=MsG0480022224.01.T01:exon:59610;Parent=MsG0480022224.01.T01
Chr4 exon 69867192 69867698 69867192 ID=MsG0480022224.01.T01:exon:59611;Parent=MsG0480022224.01.T01
Chr4 five_prime_UTR 69863167 69863286 69863167 ID=MsG0480022224.01.T01:five_prime_utr;Parent=MsG0480022224.01.T01
Chr4 five_prime_UTR 69864089 69864090 69864089 ID=MsG0480022224.01.T01:five_prime_utr;Parent=MsG0480022224.01.T01
Chr4 CDS 69864091 69864270 69864091 ID=MsG0480022224.01.T01:cds;Parent=MsG0480022224.01.T01
Chr4 CDS 69865124 69865225 69865124 ID=MsG0480022224.01.T01:cds;Parent=MsG0480022224.01.T01
Chr4 CDS 69865333 69865429 69865333 ID=MsG0480022224.01.T01:cds;Parent=MsG0480022224.01.T01
Chr4 CDS 69865750 69866038 69865750 ID=MsG0480022224.01.T01:cds;Parent=MsG0480022224.01.T01
Chr4 CDS 69866202 69866269 69866202 ID=MsG0480022224.01.T01:cds;Parent=MsG0480022224.01.T01
Chr4 CDS 69866381 69866502 69866381 ID=MsG0480022224.01.T01:cds;Parent=MsG0480022224.01.T01
Chr4 CDS 69866593 69866641 69866593 ID=MsG0480022224.01.T01:cds;Parent=MsG0480022224.01.T01
Chr4 CDS 69867192 69867415 69867192 ID=MsG0480022224.01.T01:cds;Parent=MsG0480022224.01.T01
Chr4 three_prime_UTR 69867416 69867698 69867416 ID=MsG0480022224.01.T01:three_prime_utr;Parent=MsG0480022224.01.T01
Gene Sequence

>MsG0480022224.01.T01

ATGGCGGTACCTGAAGCAGTTCAAACCCCAACCTCTCAGATGGTTGGCAATGCTTTTGTGGAGCAGTATTACTCAATTCTGCACCGCGACCCGGATCAGGTTCATAGGTTTTACCACGACTCAAGTGTCATGAGTCGACCTGAAGAAGATGGTACCATGACAACTGTCACCACCACTGCAGAAATTGATAAAAAGATACAATCTCTCAAGTACACAAGCTTTAGGGTGGAGGTTTTGAGTGCTGATGCTCAGCCTTCATATAATAATGGAGTGATGGTTGTAATATGTGATGCGTATAAGTCAATTGATACCGAGTCTGTGCCAGCAAATGATGCTGATGAAAGTGCTCCATCAGAACCTATTATTACACCCGAGCCTGAGCCTGTTCATGTTCCTGAAGTCATTCCACCCACTCAAACTGTTGTTCCACCCGCTCAAACTGTTATTCCACCCACTCAAACTGTTATTGCTGATACTGAAACTATCATCAGCAAAGAAGTGAGCTTGCCACTGGAGAATGGAAAATTATCAGTTACTGAAAATGTGATTCCTGTTAATCATGTTAAAGAGTCAAGTCATCATGTTAAGGAACCGGAACAACCCACAAGCATTGAGAAAGTTGCTTCAAATACACAGGAGGATACTCCAAAAAAGTCTTTGCATCCATTCGTGGCTGCTCCTGAAGTACCAGCCCCTAACAATGACATTCCATTGGAAAAGAATAATGAGAACGCAGGTAGGGCTCATGCAATATTTGTTGCGAATTTGCCTATGAGTGCAACAGTAGAGCAATTGGATCGGGCTTTCAAGAAATTTGGGCCCATTAAACGTGATGGTATTCAAGTTAGAAGTAACAAGGGGTCTTGTTTTGGTTTTGTGGAGTTTGAATCTGCTGCTTCAATGCAAAGGCGTAGTGGATACCGAAATGACAGAAATGATAACTTCAGGGGCCGTGGCAACTTTGGTGGCGGTCGTGGGGGTGGCTTTAACGGAAGGAACGATTTGAGAGGCGAGGTGAGTTCTCTGGCCGACCTCGAGGAGGCCAGAATGCCGGGCGAAGCAATGGAGATGCTGTGCCAAGGAGTTATCAGAATGGAGGAGGAAAAGTCGCTGCTCGTCAACCACCAGTGA
Protein sequence

>MsG0480022224.01.T01

MAVPEAVQTPTSQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTAEIDKKIQSLKYTSFRVEVLSADAQPSYNNGVMVVICDAYKSIDTESVPANDADESAPSEPIITPEPEPVHVPEVIPPTQTVVPPAQTVIPPTQTVIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSIEKVASNTQEDTPKKSLHPFVAAPEVPAPNNDIPLEKNNENAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNKGSCFGFVEFESAASMQRRSGYRNDRNDNFRGRGNFGGGRGGGFNGRNDLRGEVSSLADLEEARMPGEAMEMLCQGVIRMEEEKSLLVNHQ*